CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483335	Streptococcus pyogenes strain NCTC8332 genome assembly, chromosome: 1	2 crisprs	DinG,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD,DEDDh,csa3	5	9	13	12

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483335_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483335_2

996008-996109

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483335_2

>merge|LS483335|2|996008-996109|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>LS483335|2|2|996008-996109|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
LS483335.1\|SQF17804.1\|993611_993947_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|225380
LS483335.1\|SQF17798.1\|987183_988506_+\|amino-acid-symporter	unknown	unknown	gnl\|CDD\|224040
LS483335.1\|SQF17807.1\|996907_998410_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LS483335.1\|SQF17812.1\|1003939_1004725_+\|ABC-transporter-permease-protein	unknown	unknown	unknown
LS483335.1\|SQF17809.1\|999565_1002676_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LS483335.1\|SQF17815.1\|1006482_1007283_+\|streptodornase	unknown	unknown	gnl\|CDD\|372824
LS483335.1\|SQF17801.1\|991372_992209_-\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483335.1\|SQF17802.1\|992224_992854_-\|histidine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483335.1\|SQF17810.1\|1002860_1003232_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LS483335.1\|SQF17803.1\|992863_993505_-\|histidine-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LS483335.1\|SQF17811.1\|1003231_1003930_+\|ABC-transporter-family-protein	unknown	unknown	gnl\|CDD\|224054
LS483335.1\|SQF17806.1\|996132_996690_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LS483335.1\|SQF17796.1\|983724_983973_-\|transglycosylase-associated-family-protein	unknown	unknown	gnl\|CDD\|225170
LS483335.1\|SQF17800.1\|990230_991004_-\|protein-B	unknown	unknown	gnl\|CDD\|369335
LS483335.1\|SQF17814.1\|1006056_1006245_-\|paratox	unknown	unknown	unknown
LS483335.1\|SQF17799.1\|988625_989861_+\|cation-diffusion-facilitator-transporter-family-protein	unknown	unknown	gnl\|CDD\|223131
LS483335.1\|SQF17797.1\|984335_986654_-\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
LS483335.1\|SQF17805.1\|994142_995957_-\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LS483335.1\|SQF17813.1\|1004851_1005466_-\|membrane-protein	unknown	unknown	gnl\|CDD\|223475
LS483335.1\|SQF17808.1\|998472_999486_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111

Protein	Function_ID	Function_description	E-value
LS483335.1\|SQF17804.1\|993611_993947_-\|phosphonoacetate-hydrolase	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.87366e-64
LS483335.1\|SQF17798.1\|987183_988506_+\|amino-acid-symporter	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LS483335.1\|SQF17807.1\|996907_998410_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LS483335.1\|SQF17809.1\|999565_1002676_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LS483335.1\|SQF17815.1\|1006482_1007283_+\|streptodornase	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	7.11109e-26
LS483335.1\|SQF17801.1\|991372_992209_-\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.79673e-109
LS483335.1\|SQF17802.1\|992224_992854_-\|histidine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.89978e-111
LS483335.1\|SQF17810.1\|1002860_1003232_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
LS483335.1\|SQF17803.1\|992863_993505_-\|histidine-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.36474e-71
LS483335.1\|SQF17811.1\|1003231_1003930_+\|ABC-transporter-family-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
LS483335.1\|SQF17806.1\|996132_996690_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
LS483335.1\|SQF17796.1\|983724_983973_-\|transglycosylase-associated-family-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
LS483335.1\|SQF17800.1\|990230_991004_-\|protein-B	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	2.99641e-97
LS483335.1\|SQF17799.1\|988625_989861_+\|cation-diffusion-facilitator-transporter-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.35889e-95
LS483335.1\|SQF17797.1\|984335_986654_-\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
LS483335.1\|SQF17805.1\|994142_995957_-\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LS483335.1\|SQF17813.1\|1004851_1005466_-\|membrane-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
LS483335.1\|SQF17808.1\|998472_999486_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0

>LS483335.1|SQF17805.1|994142_995957_-|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LS483335.1|SQF17804.1|993611_993947_-|phosphonoacetate-hydrolase
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVALDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LS483335.1|SQF17803.1|992863_993505_-|histidine-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKVPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LS483335.1|SQF17802.1|992224_992854_-|histidine-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LS483335.1|SQF17801.1|991372_992209_-|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQNKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LS483335.1|SQF17800.1|990230_991004_-|protein-B
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKDQVQEIKALEEKVINYPDLQPTGRATIYTKAKLNKAIWNTRLERDKKVLGIKPFGVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>LS483335.1|SQF17799.1|988625_989861_+|cation-diffusion-facilitator-transporter-family-protein
MTQDPIANLKLARKGPIVSIIVYLLLSAAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHHTHYRIVKM
>LS483335.1|SQF17798.1|987183_988506_+|amino-acid-symporter
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDASGHISGGPMYYIVNGMGTKWKPLAILFASSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LS483335.1|SQF17797.1|984335_986654_-|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLLDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEASEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LS483335.1|SQF17796.1|983724_983973_-|transglycosylase-associated-family-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN
>LS483335.1|SQF17806.1|996132_996690_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LS483335.1|SQF17807.1|996907_998410_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LS483335.1|SQF17808.1|998472_999486_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LS483335.1|SQF17809.1|999565_1002676_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLKGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELIIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDYFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LS483335.1|SQF17810.1|1002860_1003232_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LS483335.1|SQF17811.1|1003231_1003930_+|ABC-transporter-family-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LS483335.1|SQF17812.1|1003939_1004725_+|ABC-transporter-permease-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTITLAFAIAIVIVPMFNVNELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHNHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LS483335.1|SQF17813.1|1004851_1005466_-|membrane-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LS483335.1|SQF17814.1|1006056_1006245_-|paratox
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDYIK
>LS483335.1|SQF17815.1|1006482_1007283_+|streptodornase
MSKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTGSYQLVLGDLDNLQRPTFAHIQLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDRGHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYYENRLDSWLALHPNFWLDYKVTPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDYQTGMMLDSTQNEEDSNLETEEFEEAA

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Crispr_ID: LS483335_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483335_3

1310013-1310243

TypeI

I-C

Consensus_repeat	Method
TATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGAC	CRISPRCasFinder

3 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD

The CRISPR arrays of LS483335_3

>merge|LS483335|3|1310013-1310243|CRT,PILER-CR,CRISPRCasFinder
TCTTTCAATCCACTCACCCATGAAGGGTGAGACGAGAGTAAGTTAAATGCGAGGTAAAAATGAACATTATTTCAATCCACTCACCCATGAAGGGTGAGACATGATACTGTCACCAGATTGCCTCAAGAGGGACTATTTCAATCCACTCACCCATAAAGGGTGAGACGGTCGCGTCGAAGACGAAGTTATTATCAACAAAATTTCAATCCACTCACCCATGAAGGGCGAGAC

>LS483335|3|1|1310013-1310243|CRT
TCTTTCAATCCACTCACCCATGAAGGGTGAGAC	GAGAGTAAGTTAAATGCGAGGTAAAAATGAACAT
TATTTCAATCCACTCACCCATGAAGGGTGAGAC	ATGATACTGTCACCAGATTGCCTCAAGAGGGAC
TATTTCAATCCACTCACCCATAAAGGGTGAGAC	GGTCGCGTCGAAGACGAAGTTATTATCAACAA
AATTTCAATCCACTCACCCATGAAGGGCGAGAC

>LS483335|3|2|1310015-1310243|PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGACG	AGAGTAAGTTAAATGCGAGGTAAAAATGAACATTA
TTTCAATCCACTCACCCATGAAGGGTGAGACA	TGATACTGTCACCAGATTGCCTCAAGAGGGACTA
TTTCAATCCACTCACCCATAAAGGGTGAGACG	GTCGCGTCGAAGACGAAGTTATTATCAACAAAA
TTTCAATCCACTCACCCATGAAGGGCGAGAC

>LS483335|3|3|1310015-1310243|CRISPRCasFinder
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GAGAGTAAGTTAAATGCGAGGTAAAAATGAACATTA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	ATGATACTGTCACCAGATTGCCTCAAGAGGGACTA
TTTCAATCCACTCACCCATAAAGGGTGAGAC	GGTCGCGTCGAAGACGAAGTTATTATCAACAAAA
TTTCAATCCACTCACCCATGAAGGGCGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483335.1\|SQF18166.1\|1299939_1301175_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
LS483335.1\|SQF18175.1\|1309143_1309854_-\|cytochrome-c-type-biogenesis-protein	unknown	unknown	gnl\|CDD\|223856
LS483335.1\|SQF18169.1\|1302909_1303626_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483335.1\|SQF18181.1\|1313235_1315131_-\|CRISPR-associated-protein,-Csd1-family	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
LS483335.1\|SQF18180.1\|1312382_1313231_-\|putative-cytoplasmic-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
LS483335.1\|SQF18184.1\|1317893_1318400_-\|ATP-dependent-RNA-helicase	cas3HD	cd09641_cas3HD_CAS-I	gnl\|CDD\|193608
LS483335.1\|SQF18168.1\|1302270_1302744_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
LS483335.1\|SQF18170.1\|1303648_1304728_-\|cytoplasmic-protein	unknown	unknown	gnl\|CDD\|225197
LS483335.1\|SQF18167.1\|1301448_1302129_-\|Fumarate-and-nitrate-reduction-regulatory-protein	unknown	unknown	gnl\|CDD\|223736
LS483335.1\|SQF18172.1\|1306530_1307271_-\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483335.1\|SQF18183.1\|1315992_1317852_-\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483335.1\|SQF18178.1\|1311077_1311710_-\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483335.1\|SQF18174.1\|1308507_1309131_-\|disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|239264
LS483335.1\|SQF18185.1\|1318553_1321205_-\|valyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235582
LS483335.1\|SQF18171.1\|1304800_1306534_-\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483335.1\|SQF18177.1\|1310695_1311112_-\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483335.1\|SQF18176.1\|1310391_1310685_-\|hypothetical-cytosolic-protein	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
LS483335.1\|SQF18173.1\|1307358_1308465_-\|bifunctional-methionine-sulfoxide-reductase-A/B	unknown	unknown	gnl\|CDD\|184456
LS483335.1\|SQF18182.1\|1315130_1316042_-\|CRISPR-associated-protein-cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
LS483335.1\|SQF18179.1\|1311706_1312381_-\|RecB-family-exonuclease	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385

Protein	Function_ID	Function_description	E-value
LS483335.1\|SQF18166.1\|1299939_1301175_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
LS483335.1\|SQF18175.1\|1309143_1309854_-\|cytochrome-c-type-biogenesis-protein	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	4.54755e-43
LS483335.1\|SQF18169.1\|1302909_1303626_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.24939e-103
LS483335.1\|SQF18181.1\|1313235_1315131_-\|CRISPR-associated-protein,-Csd1-family	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
LS483335.1\|SQF18180.1\|1312382_1313231_-\|putative-cytoplasmic-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.21991e-159
LS483335.1\|SQF18184.1\|1317893_1318400_-\|ATP-dependent-RNA-helicase	gnl\|CDD\|193608	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; HD-like nuclease, specifically digesting double-stranded oligonucleotides and preferably cleaving at G:C pairs; signature gene for Type I.	1.60039e-18
LS483335.1\|SQF18168.1\|1302270_1302744_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.23847e-66
LS483335.1\|SQF18170.1\|1303648_1304728_-\|cytoplasmic-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.05813e-33
LS483335.1\|SQF18167.1\|1301448_1302129_-\|Fumarate-and-nitrate-reduction-regulatory-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40
LS483335.1\|SQF18172.1\|1306530_1307271_-\|two-component-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.46705e-83
LS483335.1\|SQF18183.1\|1315992_1317852_-\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.96215e-135
LS483335.1\|SQF18178.1\|1311077_1311710_-\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	1.18968e-106
LS483335.1\|SQF18174.1\|1308507_1309131_-\|disulfide-interchange-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.12746e-34
LS483335.1\|SQF18185.1\|1318553_1321205_-\|valyl-tRNA-synthetase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
LS483335.1\|SQF18171.1\|1304800_1306534_-\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.90982e-64
LS483335.1\|SQF18177.1\|1310695_1311112_-\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	1.4484e-79
LS483335.1\|SQF18176.1\|1310391_1310685_-\|hypothetical-cytosolic-protein	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
LS483335.1\|SQF18173.1\|1307358_1308465_-\|bifunctional-methionine-sulfoxide-reductase-A/B	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	1.02229e-162
LS483335.1\|SQF18182.1\|1315130_1316042_-\|CRISPR-associated-protein-cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.39512e-116
LS483335.1\|SQF18179.1\|1311706_1312381_-\|RecB-family-exonuclease	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.18604e-43

>LS483335.1|SQF18175.1|1309143_1309854_-|cytochrome-c-type-biogenesis-protein
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHMLLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LS483335.1|SQF18174.1|1308507_1309131_-|disulfide-interchange-protein
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVISPGHQGEKSEADFTKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LS483335.1|SQF18173.1|1307358_1308465_-|bifunctional-methionine-sulfoxide-reductase-A/B
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDATNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPVSPDVIRYKEDKSFNMTRTEVRSRSGDSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>LS483335.1|SQF18172.1|1306530_1307271_-|two-component-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLSGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>LS483335.1|SQF18171.1|1304800_1306534_-|two-component-sensor-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNSEIQDFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNPQLTMKTSSDMMAETWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGMLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTFFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGMGLLACLICGLTTILVLRKWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKPLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDHFTEIQLSLPKMHELMADDTQENE
>LS483335.1|SQF18170.1|1303648_1304728_-|cytoplasmic-protein
MSLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVEGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDLPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKKHGVAAVRGPRRLSPQLIAFLKEKEYLKENN
>LS483335.1|SQF18169.1|1302909_1303626_-|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNSQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTTTDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALEFIEGSAKMYLHATPSLHVLDKDNPHVPLFTEN
>LS483335.1|SQF18168.1|1302270_1302744_+|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATICGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>LS483335.1|SQF18167.1|1301448_1302129_-|Fumarate-and-nitrate-reduction-regulatory-protein
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>LS483335.1|SQF18166.1|1299939_1301175_-|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>LS483335.1|SQF18176.1|1310391_1310685_-|hypothetical-cytosolic-protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>LS483335.1|SQF18177.1|1310695_1311112_-|DNA-polymerase
MLLPSCLLVTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>LS483335.1|SQF18178.1|1311077_1311710_-|DNA-polymerase
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDDIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVTALLSFGYV
>LS483335.1|SQF18179.1|1311706_1312381_-|RecB-family-exonuclease
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>LS483335.1|SQF18180.1|1312382_1313231_-|putative-cytoplasmic-protein
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEAFWFTHSSKLGNVSSARVFDLLEYNQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>LS483335.1|SQF18181.1|1313235_1315131_-|CRISPR-associated-protein,-Csd1-family
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFSYYSAEMGQTQYDSFHKQLNNWIDYCEEGDVKKFLTFVQQFILKPEFLTLILDSLIAPDYQHNQLKVTYFDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVIALATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSSLRTPTFHDILNVSYGVDKDRFLELDNDNFKSDQIQKLVASLIDGKPMPLSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNDDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>LS483335.1|SQF18182.1|1315130_1316042_-|CRISPR-associated-protein-cas5
MTRKEELNTIQLAFTSNSKRKKINKRLLEDLVNLPIIINNYYQFRLFNKIRLQKKQKKESSLYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>LS483335.1|SQF18183.1|1315992_1317852_-|CRISPR-associated-helicase-Cas3
MSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQAVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEERQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>LS483335.1|SQF18184.1|1317893_1318400_-|ATP-dependent-RNA-helicase
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLSNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKNYVIMATKI
>LS483335.1|SQF18185.1|1318553_1321205_-|valyl-tRNA-synthetase
MSKELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKHVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNAAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMQKIKS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	LS483335.1	1233284-1233317	0	1.0
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	LS483335.1	1233283-1233317	0	1.0
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	LS483335.1	1233282-1233317	0	1.0
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	LS483335.1	1052505-1052537	1	0.97
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	LS483335.1	1052505-1052538	1	0.971
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	LS483335.1	1011545-1011577	2	0.939
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	LS483335.1	1011545-1011578	2	0.941

1. spacer 3.1|1310046|34|LS483335|CRT matches to position: 1233284-1233317, mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacat	Protospacer
**********************************

2. spacer 3.4|1310047|35|LS483335|PILER-CR matches to position: 1233283-1233317, mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatt	Protospacer
***********************************

3. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to position: 1233282-1233317, mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatta	Protospacer
************************************

4. spacer 3.2|1310113|33|LS483335|CRT matches to position: 1052505-1052537, mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

5. spacer 3.5|1310114|34|LS483335|PILER-CR matches to position: 1052505-1052538, mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

6. spacer 3.2|1310113|33|LS483335|CRT matches to position: 1011545-1011577, mismatch: 2, identity: 0.939

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

7. spacer 3.5|1310114|34|LS483335|PILER-CR matches to position: 1011545-1011578, mismatch: 2, identity: 0.941

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448953	Streptococcus phage Javan474, complete genome	15561-15594	0	1.0
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448790	Streptococcus phage Javan515, complete genome	12608-12641	0	1.0
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448954	Streptococcus phage Javan476, complete genome	12276-12309	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448946	Streptococcus phage Javan456, complete genome	40569-40600	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448858	Streptococcus phage Javan166, complete genome	42297-42328	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448784	Streptococcus phage Javan505, complete genome	37349-37380	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448769	Streptococcus phage Javan471, complete genome	31700-31731	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448947	Streptococcus phage Javan458, complete genome	37349-37380	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448965	Streptococcus phage Javan506, complete genome	37718-37749	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448684	Streptococcus phage Javan151, complete genome	31700-31731	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448690	Streptococcus phage Javan169, complete genome	38983-39014	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448777	Streptococcus phage Javan491, complete genome	31210-31241	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448689	Streptococcus phage Javan163, complete genome	37349-37380	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448974	Streptococcus phage Javan524, complete genome	37349-37380	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448789	Streptococcus phage Javan513, complete genome	37348-37379	0	1.0
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448678	Streptococcus phage Javan135, complete genome	35930-35961	0	1.0
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448953	Streptococcus phage Javan474, complete genome	15561-15595	0	1.0
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448790	Streptococcus phage Javan515, complete genome	12608-12642	0	1.0
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448954	Streptococcus phage Javan476, complete genome	12276-12310	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448946	Streptococcus phage Javan456, complete genome	40569-40601	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448858	Streptococcus phage Javan166, complete genome	42297-42329	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448784	Streptococcus phage Javan505, complete genome	37349-37381	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448769	Streptococcus phage Javan471, complete genome	31700-31732	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448947	Streptococcus phage Javan458, complete genome	37349-37381	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448965	Streptococcus phage Javan506, complete genome	37718-37750	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448684	Streptococcus phage Javan151, complete genome	31700-31732	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448690	Streptococcus phage Javan169, complete genome	38983-39015	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448689	Streptococcus phage Javan163, complete genome	37349-37381	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448974	Streptococcus phage Javan524, complete genome	37349-37381	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448789	Streptococcus phage Javan513, complete genome	37348-37380	0	1.0
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448678	Streptococcus phage Javan135, complete genome	35930-35962	0	1.0
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448792	Streptococcus phage Javan521, complete genome	33747-33779	1	0.97
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	NC_004584	Streptococcus prophage 315.1, complete genome	33340-33372	1	0.97
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448958	Streptococcus phage Javan486, complete genome	34018-34050	1	0.97
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448770	Streptococcus phage Javan477, complete genome	33747-33779	1	0.97
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448793	Streptococcus phage Javan523, complete genome	35296-35328	1	0.97
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448978	Streptococcus phage Javan532, complete genome	33234-33266	1	0.97
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448785	Streptococcus phage Javan507, complete genome	33235-33267	1	0.97
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448775	Streptococcus phage Javan489, complete genome	38569-38600	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448961	Streptococcus phage Javan494, complete genome	35964-35995	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448794	Streptococcus phage Javan525, complete genome	35698-35729	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448970	Streptococcus phage Javan516, complete genome	42178-42209	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448763	Streptococcus phage Javan451, complete genome	31337-31368	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448953	Streptococcus phage Javan474, complete genome	40290-40321	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448945	Streptococcus phage Javan454, complete genome	36125-36156	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448766	Streptococcus phage Javan465, complete genome	36821-36852	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448765	Streptococcus phage Javan459, complete genome	35696-35727	1	0.969
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448676	Streptococcus phage Javan131, complete genome	41326-41357	1	0.969
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448792	Streptococcus phage Javan521, complete genome	33746-33779	1	0.971
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	NC_004584	Streptococcus prophage 315.1, complete genome	33339-33372	1	0.971
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448958	Streptococcus phage Javan486, complete genome	34017-34050	1	0.971
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448770	Streptococcus phage Javan477, complete genome	33746-33779	1	0.971
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448793	Streptococcus phage Javan523, complete genome	35295-35328	1	0.971
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448978	Streptococcus phage Javan532, complete genome	33233-33266	1	0.971
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448785	Streptococcus phage Javan507, complete genome	33234-33267	1	0.971
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448777	Streptococcus phage Javan491, complete genome	31210-31242	1	0.97
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448763	Streptococcus phage Javan451, complete genome	31337-31369	1	0.97
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448676	Streptococcus phage Javan131, complete genome	41326-41358	1	0.97
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448953	Streptococcus phage Javan474, complete genome	15561-15596	1	0.972
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448790	Streptococcus phage Javan515, complete genome	12608-12643	1	0.972
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448954	Streptococcus phage Javan476, complete genome	12276-12311	1	0.972
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448946	Streptococcus phage Javan456, complete genome	40569-40602	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448858	Streptococcus phage Javan166, complete genome	42297-42330	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448784	Streptococcus phage Javan505, complete genome	37349-37382	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448769	Streptococcus phage Javan471, complete genome	31700-31733	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448947	Streptococcus phage Javan458, complete genome	37349-37382	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448965	Streptococcus phage Javan506, complete genome	37718-37751	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448684	Streptococcus phage Javan151, complete genome	31700-31733	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448690	Streptococcus phage Javan169, complete genome	38983-39016	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448689	Streptococcus phage Javan163, complete genome	37349-37382	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448974	Streptococcus phage Javan524, complete genome	37349-37382	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448789	Streptococcus phage Javan513, complete genome	37348-37381	1	0.971
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448678	Streptococcus phage Javan135, complete genome	35930-35963	1	0.971
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448960	Streptococcus phage Javan492, complete genome	12194-12227	2	0.941
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448762	Streptococcus phage Javan447, complete genome	12321-12354	2	0.941
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448970	Streptococcus phage Javan516, complete genome	16113-16146	2	0.941
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	NC_004584	Streptococcus prophage 315.1, complete genome	11126-11159	2	0.941
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448978	Streptococcus phage Javan532, complete genome	11021-11054	2	0.941
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448785	Streptococcus phage Javan507, complete genome	11021-11054	2	0.941
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448775	Streptococcus phage Javan489, complete genome	36653-36685	2	0.939
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448795	Streptococcus phage Javan527, complete genome	40277-40309	2	0.939
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448953	Streptococcus phage Javan474, complete genome	38374-38406	2	0.939
LS483335_3	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	MK448944	Streptococcus phage Javan452, complete genome	37311-37343	2	0.939
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MK448793	Streptococcus phage Javan523, complete genome	37480-37511	2	0.938
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448960	Streptococcus phage Javan492, complete genome	12194-12228	2	0.943
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448762	Streptococcus phage Javan447, complete genome	12321-12355	2	0.943
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448970	Streptococcus phage Javan516, complete genome	16113-16147	2	0.943
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	NC_004584	Streptococcus prophage 315.1, complete genome	11126-11160	2	0.943
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448978	Streptococcus phage Javan532, complete genome	11021-11055	2	0.943
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448785	Streptococcus phage Javan507, complete genome	11021-11055	2	0.943
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448775	Streptococcus phage Javan489, complete genome	36652-36685	2	0.941
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448795	Streptococcus phage Javan527, complete genome	40276-40309	2	0.941
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448953	Streptococcus phage Javan474, complete genome	38373-38406	2	0.941
LS483335_3	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	MK448944	Streptococcus phage Javan452, complete genome	37310-37343	2	0.941
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448775	Streptococcus phage Javan489, complete genome	38569-38601	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448961	Streptococcus phage Javan494, complete genome	35964-35996	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448794	Streptococcus phage Javan525, complete genome	35698-35730	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448970	Streptococcus phage Javan516, complete genome	42178-42210	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448953	Streptococcus phage Javan474, complete genome	40290-40322	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448945	Streptococcus phage Javan454, complete genome	36125-36157	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448766	Streptococcus phage Javan465, complete genome	36821-36853	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448765	Streptococcus phage Javan459, complete genome	35696-35728	2	0.939
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MK448793	Streptococcus phage Javan523, complete genome	37480-37512	2	0.939
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448960	Streptococcus phage Javan492, complete genome	12194-12229	2	0.944
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448762	Streptococcus phage Javan447, complete genome	12321-12356	2	0.944
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448970	Streptococcus phage Javan516, complete genome	16113-16148	2	0.944
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	NC_004584	Streptococcus prophage 315.1, complete genome	11126-11161	2	0.944
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448978	Streptococcus phage Javan532, complete genome	11021-11056	2	0.944
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448785	Streptococcus phage Javan507, complete genome	11021-11056	2	0.944
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448792	Streptococcus phage Javan521, complete genome	33745-33779	2	0.943
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	NC_004584	Streptococcus prophage 315.1, complete genome	33338-33372	2	0.943
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448958	Streptococcus phage Javan486, complete genome	34016-34050	2	0.943
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448770	Streptococcus phage Javan477, complete genome	33745-33779	2	0.943
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448793	Streptococcus phage Javan523, complete genome	35294-35328	2	0.943
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448978	Streptococcus phage Javan532, complete genome	33232-33266	2	0.943
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448785	Streptococcus phage Javan507, complete genome	33233-33267	2	0.943
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448777	Streptococcus phage Javan491, complete genome	31210-31243	2	0.941
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448763	Streptococcus phage Javan451, complete genome	31337-31370	2	0.941
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448676	Streptococcus phage Javan131, complete genome	41326-41359	2	0.941
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448792	Streptococcus phage Javan521, complete genome	11102-11135	3	0.912
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448770	Streptococcus phage Javan477, complete genome	11102-11135	3	0.912
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448792	Streptococcus phage Javan521, complete genome	11102-11136	3	0.914
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448770	Streptococcus phage Javan477, complete genome	11102-11136	3	0.914
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448792	Streptococcus phage Javan521, complete genome	11102-11137	3	0.917
LS483335_3	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	MK448770	Streptococcus phage Javan477, complete genome	11102-11137	3	0.917
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448775	Streptococcus phage Javan489, complete genome	36651-36685	3	0.914
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448795	Streptococcus phage Javan527, complete genome	40275-40309	3	0.914
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448953	Streptococcus phage Javan474, complete genome	38372-38406	3	0.914
LS483335_3	3.8\|1310113\|35\|LS483335\|CRISPRCasFinder	1310113-1310147	35	MK448944	Streptococcus phage Javan452, complete genome	37309-37343	3	0.914
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448775	Streptococcus phage Javan489, complete genome	38569-38602	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448961	Streptococcus phage Javan494, complete genome	35964-35997	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448794	Streptococcus phage Javan525, complete genome	35698-35731	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448970	Streptococcus phage Javan516, complete genome	42178-42211	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448953	Streptococcus phage Javan474, complete genome	40290-40323	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448945	Streptococcus phage Javan454, complete genome	36125-36158	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448766	Streptococcus phage Javan465, complete genome	36821-36854	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448765	Streptococcus phage Javan459, complete genome	35696-35729	3	0.912
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MK448793	Streptococcus phage Javan523, complete genome	37480-37513	3	0.912
LS483335_3	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	MK448793	Streptococcus phage Javan523, complete genome	12939-12972	7	0.794
LS483335_3	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	MK448793	Streptococcus phage Javan523, complete genome	12939-12973	7	0.8
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	HQ634175	Cyanophage P-RSM1 genomic sequence	158395-158426	8	0.75
LS483335_3	3.3\|1310179\|32\|LS483335\|CRT	1310179-1310210	32	MT074483	Salmonella phage skrot, complete genome	33069-33100	9	0.719
LS483335_3	3.6\|1310180\|33\|LS483335\|PILER-CR	1310180-1310212	33	MT074483	Salmonella phage skrot, complete genome	33069-33101	9	0.727
LS483335_3	3.9\|1310179\|34\|LS483335\|CRISPRCasFinder	1310179-1310212	34	MT074483	Salmonella phage skrot, complete genome	33069-33102	10	0.706

1. spacer 3.1|1310046|34|LS483335|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacat	Protospacer
**********************************

2. spacer 3.1|1310046|34|LS483335|CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacat	Protospacer
**********************************

3. spacer 3.1|1310046|34|LS483335|CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacat	Protospacer
**********************************

4. spacer 3.3|1310179|32|LS483335|CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

5. spacer 3.3|1310179|32|LS483335|CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

6. spacer 3.3|1310179|32|LS483335|CRT matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

7. spacer 3.3|1310179|32|LS483335|CRT matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

8. spacer 3.3|1310179|32|LS483335|CRT matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

9. spacer 3.3|1310179|32|LS483335|CRT matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

10. spacer 3.3|1310179|32|LS483335|CRT matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

11. spacer 3.3|1310179|32|LS483335|CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

12. spacer 3.3|1310179|32|LS483335|CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

13. spacer 3.3|1310179|32|LS483335|CRT matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

14. spacer 3.3|1310179|32|LS483335|CRT matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

15. spacer 3.3|1310179|32|LS483335|CRT matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

16. spacer 3.3|1310179|32|LS483335|CRT matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaa	Protospacer
********************************

17. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatt	Protospacer
***********************************

18. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatt	Protospacer
***********************************

19. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

gagagtaagttaaatgcgaggtaaaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatt	Protospacer
***********************************

20. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

21. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

22. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

23. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

24. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

25. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

26. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

27. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

28. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

29. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

30. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

31. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 0, identity: 1.0

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaa	Protospacer
*********************************

32. spacer 3.2|1310113|33|LS483335|CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

33. spacer 3.2|1310113|33|LS483335|CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

34. spacer 3.2|1310113|33|LS483335|CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

35. spacer 3.2|1310113|33|LS483335|CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

36. spacer 3.2|1310113|33|LS483335|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

37. spacer 3.2|1310113|33|LS483335|CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

38. spacer 3.2|1310113|33|LS483335|CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.97

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

39. spacer 3.3|1310179|32|LS483335|CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

40. spacer 3.3|1310179|32|LS483335|CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

41. spacer 3.3|1310179|32|LS483335|CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

42. spacer 3.3|1310179|32|LS483335|CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

43. spacer 3.3|1310179|32|LS483335|CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

44. spacer 3.3|1310179|32|LS483335|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

45. spacer 3.3|1310179|32|LS483335|CRT matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

46. spacer 3.3|1310179|32|LS483335|CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

47. spacer 3.3|1310179|32|LS483335|CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

48. spacer 3.3|1310179|32|LS483335|CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaa	Protospacer
******** ***********************

49. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

50. spacer 3.5|1310114|34|LS483335|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

51. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

52. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

53. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

54. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

55. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.971

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

56. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 1, identity: 0.97

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaag	Protospacer
********************************.

57. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 1, identity: 0.97

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaaa	Protospacer
******** ************************

58. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 1, identity: 0.97

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaaa	Protospacer
******** ************************

59. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.972

gagagtaagttaaatgcgaggtaaaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacattg	Protospacer
***********************************.

60. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 1, identity: 0.972

gagagtaagttaaatgcgaggtaaaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacattg	Protospacer
***********************************.

61. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 1, identity: 0.972

gagagtaagttaaatgcgaggtaaaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacattg	Protospacer
***********************************.

62. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

63. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

64. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

65. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

66. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

67. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

68. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

69. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

70. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

71. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

72. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

73. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 1, identity: 0.971

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaaag	Protospacer
*********************************.

74. spacer 3.1|1310046|34|LS483335|CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.941

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaac--	Protospacer
***********************  *********

75. spacer 3.1|1310046|34|LS483335|CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.941

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaac--	Protospacer
***********************  *********

76. spacer 3.1|1310046|34|LS483335|CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.941

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaac--	Protospacer
***********************  *********

77. spacer 3.1|1310046|34|LS483335|CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.941

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaac--	Protospacer
***********************  *********

78. spacer 3.1|1310046|34|LS483335|CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.941

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaac--	Protospacer
***********************  *********

79. spacer 3.1|1310046|34|LS483335|CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.941

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaac--	Protospacer
***********************  *********

80. spacer 3.2|1310113|33|LS483335|CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.939

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

81. spacer 3.2|1310113|33|LS483335|CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.939

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

82. spacer 3.2|1310113|33|LS483335|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.939

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

83. spacer 3.2|1310113|33|LS483335|CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 2, identity: 0.939

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

84. spacer 3.3|1310179|32|LS483335|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.938

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
gggcgtgtcgaagacgaagttattatcaacaa	Protospacer
** **.**************************

85. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.943

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaaca--	Protospacer
***********************  **********

86. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.943

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaaca--	Protospacer
***********************  **********

87. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.943

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaaca--	Protospacer
***********************  **********

88. spacer 3.4|1310047|35|LS483335|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.943

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaaca--	Protospacer
***********************  **********

89. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.943

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaaca--	Protospacer
***********************  **********

90. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.943

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaaca--	Protospacer
***********************  **********

91. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.941

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

92. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.941

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

93. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.941

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

94. spacer 3.5|1310114|34|LS483335|PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 2, identity: 0.941

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

95. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

96. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

97. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

98. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

99. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

100. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

101. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

102. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaag	Protospacer
******** ***********************.

103. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.939

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
gggcgtgtcgaagacgaagttattatcaacaaa	Protospacer
** **.***************************

104. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.944

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaacat--	Protospacer
***********************  ***********

105. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.944

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaacat--	Protospacer
***********************  ***********

106. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.944

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaacat--	Protospacer
***********************  ***********

107. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.944

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaacat--	Protospacer
***********************  ***********

108. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.944

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaacat--	Protospacer
***********************  ***********

109. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.944

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaacaaaatgaacat--	Protospacer
***********************  ***********

110. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

111. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

112. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

113. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

114. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

115. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

116. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.943

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcaccagatagcctcaagagggactg	Protospacer
****************** ***************.

117. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 2, identity: 0.941

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtcgaagacgaagttattatcaacaagg	Protospacer
********************************..

118. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 2, identity: 0.941

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaaag	Protospacer
******** ************************.

119. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.941

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaaag	Protospacer
******** ************************.

120. spacer 3.1|1310046|34|LS483335|CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.912

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatacgaggtaacaaaatgaac--	Protospacer
***************.*******  *********

121. spacer 3.1|1310046|34|LS483335|CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.912

gagagtaagttaaatgcgaggta--aaaatgaacat	CRISPR spacer
gagagtaagttaaatacgaggtaacaaaatgaac--	Protospacer
***************.*******  *********

122. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.914

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatacgaggtaacaaaatgaaca--	Protospacer
***************.*******  **********

123. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.914

gagagtaagttaaatgcgaggta--aaaatgaacatt	CRISPR spacer
gagagtaagttaaatacgaggtaacaaaatgaaca--	Protospacer
***************.*******  **********

124. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.917

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatacgaggtaacaaaatgaacat--	Protospacer
***************.*******  ***********

125. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.917

gagagtaagttaaatgcgaggta--aaaatgaacatta	CRISPR spacer
gagagtaagttaaatacgaggtaacaaaatgaacat--	Protospacer
***************.*******  ***********

126. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.914

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcgccagattgccgcaagagggactg	Protospacer
***********.********** ***********.

127. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 3, identity: 0.914

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcgccagattgccgcaagagggactg	Protospacer
***********.********** ***********.

128. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.914

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcgccagattgccgcaagagggactg	Protospacer
***********.********** ***********.

129. spacer 3.8|1310113|35|LS483335|CRISPRCasFinder matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 3, identity: 0.914

atgatactgtcaccagattgcctcaagagggacta	CRISPR spacer
atgatactgtcgccagattgccgcaagagggactg	Protospacer
***********.********** ***********.

130. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

131. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

132. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

133. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

134. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

135. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

136. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

137. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
ggtcgcgtagaagacgaagttattatcaacaagg	Protospacer
******** ***********************..

138. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 3, identity: 0.912

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
gggcgtgtcgaagacgaagttattatcaacaaag	Protospacer
** **.***************************.

139. spacer 3.1|1310046|34|LS483335|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 7, identity: 0.794

gagagtaagttaaatgcgaggtaaaaatgaacat-----	CRISPR spacer
gagagtaagttaaatgcgaggtaa-----accacttttg	Protospacer
************************     * **.

140. spacer 3.4|1310047|35|LS483335|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 7, identity: 0.8

gagagtaagttaaatgcgaggtaaaaatgaacatt-----	CRISPR spacer
gagagtaagttaaatgcgaggtaa-----accacttttgg	Protospacer
************************     * **.*

141. spacer 3.3|1310179|32|LS483335|CRT matches to HQ634175 (Cyanophage P-RSM1 genomic sequence) position: , mismatch: 8, identity: 0.75

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
gctgaggaagaagacgaagttaatatgaacaa	Protospacer
* * . *  ************* *** *****

142. spacer 3.3|1310179|32|LS483335|CRT matches to MT074483 (Salmonella phage skrot, complete genome) position: , mismatch: 9, identity: 0.719

ggtcgcgtcgaagacgaagttattatcaacaa	CRISPR spacer
cgcaacgtcgaagtcgaatttattatcaatcc	Protospacer
 *. .******** **** **********.

143. spacer 3.6|1310180|33|LS483335|PILER-CR matches to MT074483 (Salmonella phage skrot, complete genome) position: , mismatch: 9, identity: 0.727

ggtcgcgtcgaagacgaagttattatcaacaaa	CRISPR spacer
cgcaacgtcgaagtcgaatttattatcaatcca	Protospacer
 *. .******** **** **********.  *

144. spacer 3.9|1310179|34|LS483335|CRISPRCasFinder matches to MT074483 (Salmonella phage skrot, complete genome) position: , mismatch: 10, identity: 0.706

ggtcgcgtcgaagacgaagttattatcaacaaaa	CRISPR spacer
cgcaacgtcgaagtcgaatttattatcaatccac	Protospacer
 *. .******** **** **********.  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36227 : 47345

Synechococcus_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF16878.1\|36227_40001_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.0e-39	27.4
SQF16879.1\|40234_41689_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
SQF16880.1\|41716_42739_+	phosphoribosylaminoimidazole synthetase	A0A0E3FGG1	Synechococcus_phage	1.4e-63	42.0
SQF16881.1\|42906_43461_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.6e-24	35.0
SQF16882.1\|43644_45192_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	3.4e-45	51.3
SQF16883.1\|45261_46125_-\|transposase	transposase	NA	NA	NA	NA
SQF16884.1\|46220_47345_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6

DBSCAN-SWA_2

333228 : 339260

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17150.1\|333228_333864_+	thymidylate kinase	M1PSC7	Streptococcus_phage	2.0e-65	63.4
SQF17151.1\|333881_334757_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-68	46.6
SQF17152.1\|334775_335015_+	Tpl protein	NA	NA	NA	NA
SQF17153.1\|335418_335742_+	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQF17154.1\|335746_336610_+	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	1.9e-114	74.3
SQF17155.1\|336636_337029_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF17156.1\|337075_337705_-	copper homeostasis protein	NA	NA	NA	NA
SQF17157.1\|338002_338359_+	arsenate reductase	M1PLC0	Streptococcus_phage	1.8e-39	65.0
SQF17158.1\|338432_339260_-	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	5.8e-129	79.3

DBSCAN-SWA_3

347607 : 390361

Mycobacterium_phage(18.18%)

bacteriocin,transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17162.1\|347607_349605_+\|tRNA	methionyl-tRNA synthetase	A0A1V0SHR2	Klosneuvirus	1.3e-86	35.0
SQF17163.1\|350099_351113_+	ribonucleotide-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	5.5e-97	53.4
SQF17164.1\|351116_351605_+	nrdI protein	R4JF54	Bacillus_phage	1.3e-11	37.5
SQF17165.1\|351571_353752_+	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	9.5e-171	43.2
SQF17166.1\|353955_354708_-	ADP-ribosyltransferase	NA	NA	NA	NA
SQF17167.1\|355164_355617_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF17168.1\|355804_356056_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF17169.1\|356150_356852_-	phage protein	NA	NA	NA	NA
SQF17170.1\|357530_357863_+	Uncharacterised protein	NA	NA	NA	NA
SQF17171.1\|357902_358028_-	Uncharacterised protein	NA	NA	NA	NA
SQF17172.1\|358164_358863_-	exotoxin J	NA	NA	NA	NA
SQF17173.1\|359131_359788_-	phage protein	NA	NA	NA	NA
SQF17174.1\|360147_360384_+	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA
SQF17175.1\|360376_361075_+	3-ketoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.2e-10	25.2
SQF17176.1\|361150_362110_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
SQF17177.1\|362442_363780_+	phosphoglycerate transporter protein	NA	NA	NA	NA
SQF17178.1\|363952_365335_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A2K9L4K9	Tupanvirus	8.5e-32	36.0
SQF17179.1\|365368_365923_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA
SQF17180.1\|365922_366174_+	membrane protein	NA	NA	NA	NA
SQF17181.1\|366193_366889_+	MTA/SAH nucleosidase	NA	NA	NA	NA
SQF17182.1\|367039_367381_+	Uncharacterised protein	NA	NA	NA	NA
SQF17183.1\|367479_368127_-	metalloregulator ScaR	NA	NA	NA	NA
SQF17184.1\|368272_369205_+	manganese-binding protein	NA	NA	NA	NA
SQF17185.1\|369268_369994_+	manganese transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.1e-17	32.6
SQF17186.1\|369994_370849_+	ABC 3 transport family protein	NA	NA	NA	NA
SQF17187.1\|370995_371802_-	cyclophilin type peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.9e-20	36.6
SQF17188.1\|372018_374424_+	cell division protein FtsK	S5VNE3	Mycobacterium_phage	3.8e-88	51.7
SQF17189.1\|374494_374848_-	integral membrane protein	NA	NA	NA	NA
SQF17190.1\|375091_375517_+	50S ribosomal protein L11	NA	NA	NA	NA
SQF17191.1\|375622_376312_+	50S ribosomal protein L1	NA	NA	NA	NA
SQF17192.1\|376636_377365_+	uridylate kinase	NA	NA	NA	NA
SQF17193.1\|377393_377951_+	ribosome recycling factor	NA	NA	NA	NA
SQF17194.1\|378059_378917_+	s1 RNA binding domain	NA	NA	NA	NA
SQF17195.1\|378989_379499_+	methionine sulfoxide reductase A	NA	NA	NA	NA
SQF17196.1\|379495_379711_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF17197.1\|379866_381036_+	lysM domain protein	A0A0E3XB61	Gordonia_phage	5.5e-16	40.5
SQF17198.1\|381349_383122_+	myosin-cross-reactive antigen	NA	NA	NA	NA
SQF17199.1\|383280_384333_+	phosphate starvation-induced protein	W8D063	Erwinia_phage	1.2e-46	50.0
SQF17200.1\|384378_384954_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA
SQF17201.1\|385112_385610_+\|protease	metalloprotease	NA	NA	NA	NA
SQF17202.1\|385590_385998_+	diacylglycerol kinase	NA	NA	NA	NA
SQF17203.1\|386117_387014_+	GTP-binding protein Era	NA	NA	NA	NA
SQF17204.1\|387033_387510_+	phosphohydrolase	NA	NA	NA	NA
SQF17205.1\|387815_388070_-	Uncharacterised protein	NA	NA	NA	NA
SQF17206.1\|388467_388713_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF17207.1\|388727_388910_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF17208.1\|389247_389397_-\|transposase	IS1191 transposase	NA	NA	NA	NA
SQF17209.1\|389393_389816_-\|transposase	transposase, Mutator family protein	NA	NA	NA	NA
SQF17210.1\|390133_390361_+\|bacteriocin	bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_4

526884 : 558221

Streptococcus_phage(50.0%)

transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17346.1\|526884_528231_+\|tRNA	asparaginyl-tRNA synthetase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8
SQF17347.1\|528644_529535_+	P-loop ATPase protein family protein	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
SQF17348.1\|529531_530509_+	transporter	A1IMD5	Streptococcus_phage	1.2e-138	74.2
SQF17349.1\|530505_531417_+	sporulation Regulator WhiA C terminal domain-containing protein	Q7AWZ3	Streptococcus_phage	1.1e-104	64.0
SQF17350.1\|531744_532158_+	Uncharacterised protein	NA	NA	NA	NA
SQF17351.1\|532455_532701_+\|transposase	truncated transposase	NA	NA	NA	NA
SQF17352.1\|532658_533042_+\|transposase	transposase	Q9MBM9	Staphylococcus_prophage	3.9e-19	39.7
SQF17353.1\|533218_534352_+\|transposase	transposase	NA	NA	NA	NA
SQF17354.1\|534356_534578_+	hupothetical protein	NA	NA	NA	NA
SQF17355.1\|534798_535452_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	4.0e-24	33.0
SQF17356.1\|536284_537703_+	dipeptidase	NA	NA	NA	NA
SQF17357.1\|537854_539402_+	high-affinity zinc uptake system protein	NA	NA	NA	NA
SQF17358.1\|539552_540275_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQF17359.1\|540294_541494_+	tagatose-6-phosphate ketose/aldose isomerase	NA	NA	NA	NA
SQF17360.1\|541590_541851_-	50S ribosomal protein L31	NA	NA	NA	NA
SQF17361.1\|541965_542907_-	DHH family protein	NA	NA	NA	NA
SQF17362.1\|543300_543750_+	flavodoxin	NA	NA	NA	NA
SQF17363.1\|543924_544209_+	chorismate mutase	NA	NA	NA	NA
SQF17364.1\|544201_545464_+	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.2e-93	50.3
SQF17365.1\|545578_545926_+	50S ribosomal protein L19	NA	NA	NA	NA
SQF17366.1\|546940_547510_+	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA
SQF17367.1\|547510_549463_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	8.9e-144	46.2
SQF17368.1\|549830_551555_+	septation ring formation regulator	NA	NA	NA	NA
SQF17369.1\|551686_552145_-	hypothetical cytosolic protein	W6LLD2	Streptococcus_phage	1.8e-18	39.1
SQF17370.1\|552377_553685_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	1.2e-240	96.6
SQF17371.1\|554454_554616_+\|bacteriocin	bacteriocin protoxin, streptolysin S family protein	NA	NA	NA	NA
SQF17372.1\|554837_555788_+	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA
SQF17373.1\|555784_556843_+\|bacteriocin	bacteriocin biosynthesis cyclodehydratase	NA	NA	NA	NA
SQF17374.1\|556862_558221_+\|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_5

618791 : 629394

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17429.1\|618791_621002_-	phosphoglycerol transferase	W6LM83	Streptococcus_phage	8.5e-268	68.9
SQF17430.1\|621109_622273_+	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQF17431.1\|622269_622956_+	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQF17432.1\|623049_624216_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
SQF17433.1\|624276_624618_+	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	40.2
SQF17434.1\|624838_626191_+	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-31	24.2
SQF17435.1\|626278_627547_-	folylpolyglutamate synthase	NA	NA	NA	NA
SQF17436.1\|627576_628017_-	membrane protein	NA	NA	NA	NA
SQF17437.1\|628251_629394_+	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	8.3e-25	27.3

DBSCAN-SWA_6

656350 : 691341

Bacillus_phage(25.0%)

head,transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17462.1\|656350_657082_+\|tRNA	tRNA (guanine-N(1)-)-methyltransferase	NA	NA	NA	NA
SQF17463.1\|657081_658074_+	thioredoxin reductase	Q9JRK7	Streptococcus_phage	8.2e-29	54.9
SQF17464.1\|658251_659310_+	regulatory protein	NA	NA	NA	NA
SQF17465.1\|659322_660246_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
SQF17466.1\|660546_661215_+	deoR-like helix-turn-helix domain-containing protein	A0A077SK06	Escherichia_phage	4.8e-17	32.7
SQF17467.1\|661211_662123_+	1-phosphofructokinase	NA	NA	NA	NA
SQF17468.1\|662119_664066_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA
SQF17469.1\|664164_664758_+	N-acetylmuramidase	A0A249Y0X5	Enterococcus_phage	3.5e-11	33.8
SQF17470.1\|664908_665616_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	Q332B8	Clostridium_botulinum_C_phage	1.9e-11	36.4
SQF17471.1\|665771_665891_-\|transposase	degenerate transposase	NA	NA	NA	NA
SQF17472.1\|666187_666862_-	exotoxin J	NA	NA	NA	NA
SQF17473.1\|667026_667791_-	Exotoxin type C precursor	Q938J1	Temperate_phage	4.9e-114	81.6
SQF17474.1\|667950_668814_+\|transposase	transposase	NA	NA	NA	NA
SQF17475.1\|668861_669887_-\|protease	igG-degrading protease	NA	NA	NA	NA
SQF17476.1\|670390_670567_+	nucleoside diphosphate kinase	NA	NA	NA	NA
SQF17477.1\|670794_671175_+\|transposase	transposase	NA	NA	NA	NA
SQF17478.1\|671174_672023_+	degV family protein	NA	NA	NA	NA
SQF17479.1\|672147_673356_+\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	5.3e-38	45.0
SQF17480.1\|673352_675230_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	8.7e-64	31.5
SQF17481.1\|676121_676532_+	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQF17482.1\|676612_678007_-	5'-nucleotidase	NA	NA	NA	NA
SQF17483.1\|678057_678624_-	5'-nucleotidase	NA	NA	NA	NA
SQF17484.1\|678843_679494_+	GTP pyrophosphokinase	NA	NA	NA	NA
SQF17485.1\|679496_680165_+	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQF17486.1\|680173_681406_+	two component system histidine kinase	NA	NA	NA	NA
SQF17487.1\|681699_682578_+	mevalonate kinase	NA	NA	NA	NA
SQF17488.1\|682559_683504_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQF17489.1\|683496_684510_+	phosphomevalonate kinase	NA	NA	NA	NA
SQF17490.1\|684496_685486_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQF17491.1\|685715_686993_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQF17492.1\|686979_688155_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQF17493.1\|688375_689215_+	thymidylate synthase	U5J9N5	Bacillus_phage	1.7e-83	53.2
SQF17494.1\|689294_689792_+	dihydrofolate reductase	W5QU76	Bacillus_phage	1.1e-10	34.4
SQF17495.1\|689811_689982_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF17496.1\|690111_691341_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.7e-137	60.5

DBSCAN-SWA_7

724475 : 777927

Streptococcus_phage(78.85%)

portal,tRNA,tail,integrase,terminase

attL 738778:738826|attR 779024:779072

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17528.1\|724475_725375_+\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQF17529.1\|725447_726686_+	GTP-binding protein HflX	NA	NA	NA	NA
SQF17530.1\|726669_727314_+	cystathionine beta-lyase	NA	NA	NA	NA
SQF17531.1\|727328_728258_+	ribonuclease Z	NA	NA	NA	NA
SQF17532.1\|728257_729022_+	short chain dehydrogenase	NA	NA	NA	NA
SQF17533.1\|729018_731229_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	6.6e-71	30.2
SQF17534.1\|731378_731897_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-30	42.4
SQF17535.1\|731977_732661_+	DNA replication protein DnaD	Q938N2	Temperate_phage	2.2e-09	36.8
SQF17536.1\|732657_733314_+	endonuclease III	NA	NA	NA	NA
SQF17537.1\|733385_734072_+	SAM-dependent methyltransferase	NA	NA	NA	NA
SQF17538.1\|734061_734850_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF17539.1\|734889_735996_+	FAD dependent oxidoreductase family protein	NA	NA	NA	NA
SQF17540.1\|736053_736923_+	glucose-1-phosphate thymidyl transferase	K7QKA7	Escherichia_phage	2.4e-101	64.6
SQF17541.1\|736922_737516_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
SQF17542.1\|737759_738800_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-68	43.9
738778:738826	attL	NA	NA	NA	NA
SQF17543.1\|738882_740022_-\|integrase	phage integrase	A1EAB7	Streptococcus_phage	1.2e-119	56.3
SQF17544.1\|740149_740416_-	phage protein	NA	NA	NA	NA
SQF17545.1\|740427_740814_-	phage protein	M1PFJ2	Streptococcus_phage	3.3e-34	55.5
SQF17546.1\|740816_741167_-	DNA-binding phage protein	C5J980	Streptococcus_phage	1.1e-33	62.6
SQF17547.1\|741474_741690_+	phage protein	M1Q1B4	Streptococcus_phage	1.2e-25	79.7
SQF17548.1\|741700_741967_+	phage protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
SQF17549.1\|741901_742708_-	protein Ymh	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
SQF17550.1\|742849_743089_-	phage protein	NA	NA	NA	NA
SQF17551.1\|743255_743441_+	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQF17552.1\|743518_743830_+	excisionase	A0A1S5SA25	Streptococcus_phage	8.2e-44	80.4
SQF17553.1\|743831_744002_+	phage protein	A7J273	Streptococcus_phage	1.2e-20	89.3
SQF17554.1\|743994_744198_+	phage protein	NA	NA	NA	NA
SQF17555.1\|744194_744581_+	phage protein	A7J274	Streptococcus_phage	3.3e-58	89.0
SQF17556.1\|744577_744715_+	phage protein	NA	NA	NA	NA
SQF17557.1\|744724_745075_+	phage protein	NA	NA	NA	NA
SQF17558.1\|745071_745275_+	phage protein	A7J276	Streptococcus_phage	1.6e-32	98.5
SQF17559.1\|745363_745663_+	phage protein	A7J277	Streptococcus_phage	1.8e-43	100.0
SQF17560.1\|745662_746820_+	phage protein	A7J278	Streptococcus_phage	8.8e-216	97.9
SQF17561.1\|746834_747392_+	phage protein	D2J040	Enterococcus_phage	3.3e-51	58.5
SQF17562.1\|747434_749357_+	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	99.1
SQF17563.1\|749361_751746_+	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	4.8e-277	94.8
SQF17564.1\|752131_752407_+	phage protein	A7J283	Streptococcus_phage	7.7e-46	97.8
SQF17565.1\|752403_753726_+	SNF2 family phage protein	A7J284	Streptococcus_phage	5.1e-252	97.7
SQF17566.1\|753726_753897_+	phage protein	A7J285	Streptococcus_phage	9.0e-21	92.3
SQF17567.1\|753889_754162_+	phage membrane protein	A7J287	Streptococcus_phage	5.7e-25	73.3
SQF17568.1\|754164_754311_+	Uncharacterised protein	NA	NA	NA	NA
SQF17569.1\|754294_754711_+	phage protein	A7J289	Streptococcus_phage	3.3e-72	99.3
SQF17570.1\|754800_755253_+\|terminase	phage terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
SQF17571.1\|755242_756520_+\|terminase	terminase large subunit	A7J291	Streptococcus_phage	3.1e-246	99.8
SQF17572.1\|756535_758068_+\|portal	phage portal protein	A7J292	Streptococcus_phage	4.5e-292	99.8
SQF17573.1\|758027_759476_+	phage protein	A7J293	Streptococcus_phage	1.2e-278	99.8
SQF17574.1\|759575_759692_+	phage membrane protein	A7J294	Streptococcus_phage	2.0e-08	100.0
SQF17575.1\|759696_759963_+	putative phage associated protein	Q938K9	Temperate_phage	2.9e-37	96.6
SQF17576.1\|760130_760700_+	phage protein	A7J296	Streptococcus_phage	1.9e-83	100.0
SQF17577.1\|760712_761600_+	phage protein	A7J297	Streptococcus_phage	2.1e-161	100.0
SQF17578.1\|761611_761968_+	phage protein	A7J298	Streptococcus_phage	4.6e-59	100.0
SQF17579.1\|761978_762257_+	phage protein	A7J299	Streptococcus_phage	1.9e-47	100.0
SQF17580.1\|762253_762598_+	phage protein	A7J2A0	Streptococcus_phage	5.1e-55	98.2
SQF17581.1\|762601_762961_+	phage protein	A7J2A1	Streptococcus_phage	1.2e-57	98.3
SQF17582.1\|762972_763572_+\|tail	phage major tail protein	A7J2A2	Streptococcus_phage	1.7e-90	97.1
SQF17583.1\|763625_764081_+	phage protein	A7J2A3	Streptococcus_phage	1.2e-75	98.7
SQF17584.1\|764155_764389_+	phage protein	A7J2A4	Streptococcus_phage	6.4e-33	97.4
SQF17585.1\|764403_768786_+\|tail	phage minor tail protein	A7J2A5	Streptococcus_phage	1.3e-224	74.0
SQF17586.1\|768797_769640_+	phage protein	A7J2A6	Streptococcus_phage	3.9e-157	97.5
SQF17587.1\|769649_771632_+	phage protein	A7J2A7	Streptococcus_phage	0.0e+00	93.9
SQF17588.1\|771631_772741_+	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.3e-120	71.3
SQF17589.1\|772750_774769_+	Phage infection protein	Q938J9	Temperate_phage	3.9e-126	58.8
SQF17590.1\|774777_774939_+	phage protein	NA	NA	NA	NA
SQF17591.1\|774941_775553_+	phage protein	Q938J7	Temperate_phage	8.8e-82	91.1
SQF17592.1\|775563_775884_+	Uncharacterised protein	A3F663	Streptococcus_phage	1.2e-50	99.1
SQF17593.1\|775896_776229_+	N-acetylmuramoyl-L-alanine amidase	A3F664	Streptococcus_phage	2.8e-50	98.2
SQF17594.1\|776230_776983_+	phage-associated cell wall hydrolase	A3F665	Streptococcus_phage	1.0e-140	96.8
SQF17595.1\|777147_777927_+	exotoxin I precursor	A0A075M4C7	Staphylococcus_phage	4.6e-27	32.3
779024:779072	attR	NA	NA	NA	NA

DBSCAN-SWA_8

972534 : 1104277

177

Streptococcus_phage(61.98%)

head,portal,transposase,tRNA,tail,integrase,terminase,holin,capsid

attL 1006080:1006096|attR 1113673:1113689

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17783.1\|972534_973419_-\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
SQF17784.1\|973534_974875_-	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA
SQF17785.1\|974971_975928_-	membrane protein	NA	NA	NA	NA
SQF17786.1\|975938_976535_-	type I restriction-modification system specificty subunit	NA	NA	NA	NA
SQF17787.1\|976626_979263_-	permease family protein	NA	NA	NA	NA
SQF17788.1\|979277_979979_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-36	37.5
SQF17789.1\|980096_980639_+	bacterial regulatory s, tetR family protein	NA	NA	NA	NA
SQF17790.1\|980781_981423_-	bacterial regulatory s, gntR family protein	NA	NA	NA	NA
SQF17791.1\|981585_982074_-	general stress protein, Gls24 family	NA	NA	NA	NA
SQF17792.1\|982084_982285_-	csbD-like family protein	J7KJ36	Streptococcus_phage	2.3e-07	51.5
SQF17793.1\|982325_982865_-	response regulator	NA	NA	NA	NA
SQF17794.1\|982877_983066_-	membrane protein	NA	NA	NA	NA
SQF17795.1\|983076_983664_-	membrane protein	NA	NA	NA	NA
SQF17796.1\|983724_983973_-	transglycosylase associated family protein	NA	NA	NA	NA
SQF17797.1\|984335_986654_-	DNA helicase II / ATP-dependent DNA helicase PcrA	A7KV33	Bacillus_phage	7.1e-132	41.3
SQF17798.1\|987183_988506_+	amino acid symporter	NA	NA	NA	NA
SQF17799.1\|988625_989861_+	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
SQF17800.1\|990230_991004_-	protein B	NA	NA	NA	NA
SQF17801.1\|991372_992209_-	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA
SQF17802.1\|992224_992854_-	histidine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-27	35.5
SQF17803.1\|992863_993505_-	histidine transporter permease	NA	NA	NA	NA
SQF17804.1\|993611_993947_-	phosphonoacetate hydrolase	NA	NA	NA	NA
SQF17805.1\|994142_995957_-	glucosamine-fructose-6-phosphate aminotransferase	A7IW18	Paramecium_bursaria_Chlorella_virus	1.2e-97	38.7
SQF17806.1\|996132_996690_-	signal peptidase I	NA	NA	NA	NA
SQF17807.1\|996907_998410_-	pyruvate kinase	NA	NA	NA	NA
SQF17808.1\|998472_999486_-	6-phosphofructokinase	NA	NA	NA	NA
SQF17809.1\|999565_1002676_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	5.4e-119	29.8
SQF17810.1\|1002860_1003232_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQF17811.1\|1003231_1003930_+	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQF17812.1\|1003939_1004725_+	ABC transporter permease protein	NA	NA	NA	NA
SQF17813.1\|1004851_1005466_-	membrane protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
SQF17814.1\|1006056_1006245_-	paratox	A3F673	Streptococcus_phage	1.3e-20	83.1
1006080:1006096	attL	NA	NA	NA	NA
SQF17815.1\|1006482_1007283_+	streptodornase	NA	NA	NA	NA
SQF17816.1\|1007553_1007988_+	phage membrane protein	NA	NA	NA	NA
SQF17817.1\|1008057_1009263_-	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	1.7e-206	84.3
SQF17818.1\|1009259_1009370_-	phage membrane protein	A7J2B4	Streptococcus_phage	3.0e-09	94.4
SQF17819.1\|1009378_1009606_-	phage protein	A7J2B3	Streptococcus_phage	2.0e-31	100.0
SQF17820.1\|1009602_1009878_-\|holin	phage holin	A7J2B2	Streptococcus_phage	2.6e-41	100.0
SQF17821.1\|1009887_1010505_-	phage protein	Q938J7	Temperate_phage	2.7e-78	89.3
SQF17822.1\|1010507_1010669_-	phage protein	NA	NA	NA	NA
SQF17823.1\|1010682_1012593_-	phage infection protein	Q938J9	Temperate_phage	1.3e-120	67.8
SQF17824.1\|1012605_1013613_-	phage hyaluronidase	A7J2A8	Streptococcus_phage	1.4e-137	71.7
SQF17825.1\|1013609_1015661_-	phage protein	A3F656	Streptococcus_phage	0.0e+00	84.6
SQF17826.1\|1015657_1016437_-\|tail	phage tail protein	A3F655	Streptococcus_phage	1.9e-68	55.5
SQF17827.1\|1016468_1019735_-	tape measure domain protein	U6E979	Streptococcus_phage	1.6e-04	30.4
SQF17828.1\|1019749_1020079_-	phage protein	A0A1P8BLR3	Lactococcus_phage	2.0e-11	41.5
SQF17829.1\|1020120_1020480_-	phage protein	D7RWD6	Brochothrix_phage	4.3e-20	44.5
SQF17830.1\|1020532_1021180_-\|tail	phage major tail protein	D7RWD5	Brochothrix_phage	1.4e-40	52.0
SQF17831.1\|1021189_1021579_-	phage protein	Q38611	Lactococcus_phage	3.5e-44	68.2
SQF17832.1\|1021575_1021941_-	phage protein	A0A097BY98	Enterococcus_phage	7.7e-17	46.3
SQF17833.1\|1021921_1022230_-	phage protein	A0A2P1JTW8	Anoxybacillus_phage	5.7e-13	40.2
SQF17834.1\|1022226_1022580_-	phage protein	A0A2H4J002	uncultured_Caudovirales_phage	9.7e-25	49.6
SQF17835.1\|1022593_1022836_-	phage protein	NA	NA	NA	NA
SQF17836.1\|1022845_1023922_-\|head	phage head protein	A0A2H4J022	uncultured_Caudovirales_phage	5.5e-103	56.0
SQF17837.1\|1023921_1024302_-	structural protein	A0A0K2CNR0	Brevibacillus_phage	5.8e-07	37.1
SQF17838.1\|1024311_1024845_-	phage protein	A0A141E0S7	Streptococcus_phage	1.4e-14	83.9
SQF17839.1\|1024979_1025246_-	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.7e-34	84.1
SQF17840.1\|1025305_1025485_-	Uncharacterised protein	NA	NA	NA	NA
SQF17841.1\|1025475_1027101_-\|head	phage head morphogenesis, SPP1 gp7 family domain protein	U6E9F1	Streptococcus_phage	1.1e-46	43.8
SQF17842.1\|1027081_1028584_-\|portal	phage portal protein, SPP1 family	C9W9H5	Streptococcus_virus	4.1e-141	54.3
SQF17843.1\|1028595_1029903_-\|terminase	terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	5.9e-184	75.2
SQF17844.1\|1029880_1030312_-\|terminase	phage terminase small subunit	A0A1S5SCD2	Streptococcus_phage	1.8e-49	72.6
SQF17845.1\|1030880_1031321_-	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	7.2e-78	97.3
SQF17846.1\|1031591_1032227_-	phage protein	L0P368	Streptococcus_phage	5.5e-87	67.9
SQF17847.1\|1032226_1032628_-	Uncharacterised protein	NA	NA	NA	NA
SQF17848.1\|1032640_1032841_-	Uncharacterised protein	A0A0E3T873	Gordonia_phage	4.6e-08	45.3
SQF17849.1\|1032845_1033130_-	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	2.6e-36	86.2
SQF17850.1\|1033126_1033297_-	phage protein	Q938M0	Temperate_phage	8.5e-11	100.0
SQF17851.1\|1033293_1033707_-	phage protein	Q938M1	Temperate_phage	4.6e-34	62.4
SQF17852.1\|1033690_1033978_-	phage protein	J7KDH9	Streptococcus_phage	5.1e-32	75.0
SQF17853.1\|1033977_1034223_-	phage protein	A0A097PBE9	Streptococcus_pyogenes_phage	4.8e-39	93.8
SQF17854.1\|1034219_1034576_-	phage protein	A0A1P8VVP9	Streptococcus_phage	2.1e-59	97.5
SQF17855.1\|1034572_1035013_-	phage protein	A0A097PAS0	Streptococcus_pyogenes_phage	4.5e-80	97.9
SQF17856.1\|1035221_1035641_-	single-stranded DNA-binding protein ssb	Q938M7	Temperate_phage	3.1e-70	97.1
SQF17857.1\|1035633_1036308_-	Single-stranded DNA-binding protein	Q938M8	Temperate_phage	2.0e-103	97.3
SQF17858.1\|1036308_1036791_-	phage protein	Q938M9	Temperate_phage	1.6e-49	98.8
SQF17859.1\|1036811_1037066_-	phage protein	Q938N0	Temperate_phage	1.8e-41	97.6
SQF17860.1\|1037046_1037403_-	phage protein	A0A097PAU3	Streptococcus_pyogenes_phage	3.0e-50	99.2
SQF17861.1\|1037413_1037551_-	phage protein	J7KBQ4	Streptococcus_phage	3.5e-07	75.7
SQF17862.1\|1037550_1038393_-	phage DNA replication protein	A0A1S5S7L9	Streptococcus_phage	1.3e-48	40.7
SQF17863.1\|1038402_1039305_-	DNA replication protein dnaD	J7KBV5	Streptococcus_phage	3.0e-118	87.5
SQF17864.1\|1039318_1039633_-	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	5.9e-50	94.2
SQF17865.1\|1039648_1039783_-	phage protein	A0A1P8VVR9	Streptococcus_phage	9.6e-18	95.5
SQF17866.1\|1039779_1040076_-	phage protein	A0A097PAT8	Streptococcus_pyogenes_phage	2.3e-43	84.7
SQF17867.1\|1040153_1040339_-	phage protein	J7KH19	Streptococcus_phage	4.6e-18	68.9
SQF17868.1\|1040482_1040701_+	Uncharacterised protein	NA	NA	NA	NA
SQF17869.1\|1040686_1040818_-	Uncharacterised protein	NA	NA	NA	NA
SQF17870.1\|1040837_1041044_-	Uncharacterised protein	NA	NA	NA	NA
SQF17871.1\|1041230_1041440_+	Uncharacterised protein	NA	NA	NA	NA
SQF17872.1\|1041549_1041750_-	helix-turn-helix family protein	A0A141E205	Streptococcus_phage	2.7e-08	59.6
SQF17873.1\|1041847_1042531_+	phage protein	A0A1X9I5M7	Streptococcus_phage	1.2e-71	59.4
SQF17874.1\|1042488_1042623_-	Uncharacterised protein	X2KTZ3	Streptococcus_phage	3.4e-07	79.5
SQF17875.1\|1042658_1042817_-	Uncharacterised protein	J7KH24	Streptococcus_phage	3.4e-22	92.3
SQF17876.1\|1042912_1043014_-	Uncharacterised protein	NA	NA	NA	NA
SQF17877.1\|1043172_1044009_+	phage transcriptional repressor	A0A097PBE5	Streptococcus_pyogenes_phage	1.8e-125	88.0
SQF17878.1\|1044021_1044831_+	phage protein	J7KDP1	Streptococcus_phage	3.8e-24	35.8
SQF17879.1\|1045080_1046169_+\|integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	4.2e-204	99.4
SQF17880.1\|1046426_1046609_-	phage protein	A3F673	Streptococcus_phage	1.0e-17	71.7
SQF17881.1\|1046807_1047017_-	repressor C1	A3F668	Streptococcus_phage	1.2e-30	100.0
SQF17882.1\|1047170_1047317_+	Uncharacterised protein	A3F667	Streptococcus_phage	4.0e-17	97.9
SQF17883.1\|1047457_1047709_+	Uncharacterised protein	A3F666	Streptococcus_phage	2.8e-42	96.4
SQF17884.1\|1047972_1048212_+	Phage protein	NA	NA	NA	NA
SQF17885.1\|1048269_1048626_+	phage protein	NA	NA	NA	NA
SQF17886.1\|1048741_1049950_-	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	2.9e-214	87.5
SQF17887.1\|1049946_1050057_-	phage membrane protein	A7J2B4	Streptococcus_phage	1.8e-09	97.2
SQF17888.1\|1050065_1050293_-	phage protein	A7J2B3	Streptococcus_phage	7.6e-31	98.7
SQF17889.1\|1050289_1050562_-	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQF17890.1\|1050573_1051206_-	phage protein	Q938J7	Temperate_phage	2.0e-44	49.5
SQF17891.1\|1051208_1051637_-	phage protein	Q938J8	Temperate_phage	8.1e-58	84.3
SQF17892.1\|1051648_1053553_-	Phage infection protein	Q938J9	Temperate_phage	1.1e-210	83.7
SQF17893.1\|1053562_1054570_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	9.9e-115	64.9
SQF17894.1\|1054566_1056618_-	phage protein	A3F656	Streptococcus_phage	0.0e+00	85.3
SQF17895.1\|1056614_1057385_-\|tail	phage tail protein	A3F655	Streptococcus_phage	2.1e-128	87.5
SQF17896.1\|1057397_1061498_-\|tail	tail protein	A3F654	Streptococcus_phage	0.0e+00	68.4
SQF17897.1\|1061541_1061640_-	Uncharacterised protein	A3F653	Streptococcus_phage	7.0e-10	96.9
SQF17898.1\|1061723_1062026_-	Uncharacterised protein	A3F652	Streptococcus_phage	1.8e-48	96.0
SQF17899.1\|1062118_1062703_-\|tail	major tail protein - phage associated	A3F651	Streptococcus_phage	3.1e-92	90.2
SQF17900.1\|1062714_1063095_-	Uncharacterised protein	A3F650	Streptococcus_phage	7.4e-63	99.2
SQF17901.1\|1063087_1063486_-	Uncharacterised protein	A3F649	Streptococcus_phage	2.9e-70	100.0
SQF17902.1\|1063487_1063850_-	Uncharacterised protein	A3F648	Streptococcus_phage	1.1e-60	97.5
SQF17903.1\|1063842_1064151_-	Uncharacterised protein	A3F647	Streptococcus_phage	1.2e-47	99.0
SQF17904.1\|1064150_1064324_-	Uncharacterised protein	A3F646	Streptococcus_phage	6.4e-22	94.7
SQF17905.1\|1064337_1065471_-\|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	A3F645	Streptococcus_phage	3.2e-202	96.8
SQF17906.1\|1065487_1066294_-	scaffolding protein	A3F644	Streptococcus_phage	4.6e-147	98.1
SQF17907.1\|1066274_1067462_-\|portal	HK97 family phage portal protein	A3F643	Streptococcus_phage	5.6e-218	96.2
SQF17908.1\|1067614_1067827_-	Uncharacterised protein	A3F642	Streptococcus_phage	1.4e-34	97.1
SQF17909.1\|1067829_1069560_-\|terminase	putative phage terminase, large subunit	A3F641	Streptococcus_phage	0.0e+00	97.0
SQF17910.1\|1069572_1069890_-	Uncharacterised protein	A3F640	Streptococcus_phage	3.9e-49	99.0
SQF17911.1\|1070030_1070336_-	HNH endonuclease	A3F639	Streptococcus_phage	3.8e-54	96.0
SQF17912.1\|1070328_1070715_-	Uncharacterised protein	A3F638	Streptococcus_phage	1.4e-64	93.0
SQF17913.1\|1070740_1070944_-	Uncharacterised protein	NA	NA	NA	NA
SQF17914.1\|1071001_1071295_-	Uncharacterised protein	NA	NA	NA	NA
SQF17915.1\|1071448_1072024_-	phage associated recombinase	A3F636	Streptococcus_phage	7.4e-107	99.5
SQF17916.1\|1072183_1072585_-	phage 31 late promoter transcriptional activator	A3F635	Streptococcus_phage	2.7e-71	100.0
SQF17917.1\|1072599_1073427_-	B-cell receptor associated protein-like protein	A3F634	Streptococcus_phage	1.3e-117	100.0
SQF17918.1\|1073429_1073768_-	immunity repressor protein - phage associated	A3F633	Streptococcus_phage	1.1e-54	92.9
SQF17919.1\|1073764_1074046_-	Uncharacterised protein	A3F632	Streptococcus_phage	4.5e-33	92.2
SQF17920.1\|1074060_1074453_-	single strand binding protein	A0A1P8VVS8	Streptococcus_phage	6.9e-48	70.3
SQF17921.1\|1074449_1074671_-	Uncharacterised protein	NA	NA	NA	NA
SQF17922.1\|1074667_1075153_-	phage protein	A0A1S5S9L5	Streptococcus_phage	5.6e-23	41.4
SQF17923.1\|1075157_1075790_-	phage protein	L0P368	Streptococcus_phage	5.9e-81	65.7
SQF17924.1\|1075791_1076061_-	phage membrane protein	A7J287	Streptococcus_phage	1.4e-28	80.9
SQF17925.1\|1076057_1076228_-	phage protein	Q938M0	Temperate_phage	2.7e-09	55.4
SQF17926.1\|1076224_1076668_-	phage protein	A0A1C9LX52	Streptococcus_phage	1.6e-32	55.0
SQF17927.1\|1076684_1076810_-	phage protein	NA	NA	NA	NA
SQF17928.1\|1076823_1077051_-	phage protein	C5J991	Streptococcus_phage	9.3e-13	49.3
SQF17929.1\|1077050_1077863_-	phage DNA replication protein	A0A1P8VVV9	Streptococcus_phage	5.2e-122	77.6
SQF17930.1\|1077862_1078624_-	dnaD and phage-associated domain protein	A0A220GFI5	Streptococcus_phage	9.1e-28	56.1
SQF17931.1\|1078616_1079957_-	DNA polymerase III delta prime subunit	A0A1P8VVQ6	Streptococcus_phage	7.1e-209	84.7
SQF17932.1\|1079943_1080132_-	Uncharacterised protein	NA	NA	NA	NA
SQF17933.1\|1080252_1080444_-	Uncharacterised protein	NA	NA	NA	NA
SQF17934.1\|1080536_1080794_-	phage protein	A3F618	Streptococcus_phage	5.4e-41	98.8
SQF17935.1\|1080867_1081587_-	antirepressor - phage associated	A3F617	Streptococcus_phage	4.6e-106	78.7
SQF17936.1\|1081638_1082139_+	Uncharacterised protein	NA	NA	NA	NA
SQF17937.1\|1082258_1082393_-	Uncharacterised protein	A3F616	Streptococcus_phage	2.4e-16	95.5
SQF17938.1\|1082466_1082679_-	phage protein	M1Q1B4	Streptococcus_phage	1.7e-13	52.9
SQF17939.1\|1082713_1082989_-	Uncharacterised protein	NA	NA	NA	NA
SQF17940.1\|1083277_1083628_+	repressor - phage associated	A0A1S5SAD3	Streptococcus_phage	1.2e-35	63.5
SQF17941.1\|1083631_1084024_+	phage protein	A3F612	Streptococcus_phage	2.2e-38	68.7
SQF17942.1\|1084034_1084775_+	phage protein	A3F611	Streptococcus_phage	1.6e-130	100.0
SQF17943.1\|1085085_1086282_+\|integrase	phage associated integrase	A3F610	Streptococcus_phage	3.9e-227	99.0
SQF17944.1\|1086477_1087098_+	phage protein	NA	NA	NA	NA
SQF17945.1\|1087354_1089619_-	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
SQF17946.1\|1089653_1091147_-	4-alpha-glucanotransferase	NA	NA	NA	NA
SQF17947.1\|1091261_1092281_-	LacI family transcription regulator	C6ZCU4	Enterobacteria_phage	1.3e-16	27.8
SQF17948.1\|1092524_1093772_+	maltose/maltodextrin-binding protein	NA	NA	NA	NA
SQF17949.1\|1094045_1095407_+	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA
SQF17950.1\|1095406_1096243_+	maltose transport system permease	NA	NA	NA	NA
SQF17951.1\|1096616_1096823_+\|transposase	truncated transposase	NA	NA	NA	NA
SQF17952.1\|1096819_1097203_+\|transposase	transposase	Q9MBM9	Staphylococcus_prophage	5.1e-19	40.5
SQF17953.1\|1097716_1098700_-	alpha/beta fold family hydrolase	NA	NA	NA	NA
SQF17954.1\|1098730_1099981_-	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA
SQF17955.1\|1099973_1100213_-	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA
SQF17956.1\|1100230_1101487_-	Protein dltB	NA	NA	NA	NA
SQF17957.1\|1101483_1103022_-	D-alanine--poly(phosphoribitol) ligase subunit 1	A0A2K9KZV5	Tupanvirus	3.5e-42	28.1
SQF17958.1\|1103033_1103177_-	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA
SQF17959.1\|1103413_1104277_-\|transposase	transposase	NA	NA	NA	NA
1113673:1113689	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1119981 : 1169762

Bacillus_phage(23.08%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF17975.1\|1119981_1120497_+\|transposase	transposase	NA	NA	NA	NA
SQF17976.1\|1120517_1121324_+\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	8.3e-64	50.4
SQF17977.1\|1121623_1122496_-	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA
SQF17978.1\|1122719_1124030_+	membrane protein	NA	NA	NA	NA
SQF17979.1\|1124107_1124353_+\|transposase	transposase	NA	NA	NA	NA
SQF17980.1\|1124831_1125155_+\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	6.1e-18	46.9
SQF17981.1\|1125171_1125903_-	16S pseudouridylate synthase	NA	NA	NA	NA
SQF17982.1\|1126017_1126383_+	thioesterase superfamily protein	NA	NA	NA	NA
SQF17983.1\|1126502_1127723_-	sugar (and other) transporter family protein	NA	NA	NA	NA
SQF17984.1\|1128096_1129581_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF17985.1\|1129685_1130087_-	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA
SQF17986.1\|1130171_1130684_-	phosphorylase superfamily protein	F5CA76	Streptococcus_phi-m46.1-like_phage	9.6e-90	95.9
SQF17987.1\|1130842_1130953_-	phosphorylase Pnp/Udp family protein	NA	NA	NA	NA
SQF17988.1\|1130991_1132347_-\|tRNA	tRNA (uracil-5-)-methyltransferase	D0R096	Streptococcus_phage	3.1e-252	98.0
SQF17989.1\|1132428_1133880_-	cell envelope-related function transcriptional attenuator common domain-containing protein	NA	NA	NA	NA
SQF17990.1\|1134087_1134579_-	shikimate kinase	NA	NA	NA	NA
SQF17991.1\|1134571_1135855_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
SQF17992.1\|1135965_1136931_-	ribonuclease BN-like family protein	NA	NA	NA	NA
SQF17993.1\|1136932_1137793_-	methionine aminopeptidase Map	NA	NA	NA	NA
SQF17994.1\|1137807_1139091_-	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA
SQF17995.1\|1139099_1139642_-	acetyltransferase family protein	NA	NA	NA	NA
SQF17996.1\|1139879_1140785_-	protein G-related alpha 2M-bindingprotein	NA	NA	NA	NA
SQF17997.1\|1141142_1142402_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQF17998.1\|1142575_1143772_-	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	9.9e-138	65.4
SQF17999.1\|1144308_1146687_-	leucine Rich Repeat family protein	NA	NA	NA	NA
SQF18000.1\|1146890_1147832_+	biotin-protein ligase	NA	NA	NA	NA
SQF18001.1\|1148094_1149765_-	DNA polymerase III subunits gamma and tau	E7DN81	Pneumococcus_phage	6.6e-47	40.6
SQF18002.1\|1149764_1150262_-	GAF domain-containing protein	NA	NA	NA	NA
SQF18003.1\|1150406_1151216_+	membrane protein	NA	NA	NA	NA
SQF18004.1\|1151268_1151532_-	membrane protein	NA	NA	NA	NA
SQF18005.1\|1151611_1152238_-	uridine kinase	A0A1V0SAA3	Catovirus	2.2e-35	39.7
SQF18006.1\|1152335_1153421_+	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-33	32.3
SQF18007.1\|1153531_1154806_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
SQF18008.1\|1154899_1156327_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
SQF18009.1\|1156511_1158245_-	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA
SQF18010.1\|1158249_1158513_-	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA
SQF18011.1\|1158905_1159124_+	glutaredoxin	A0A249XUR7	Enterococcus_phage	1.1e-13	49.3
SQF18012.1\|1159143_1161303_+	ribonucleotide-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	4.7e-263	63.6
SQF18013.1\|1161506_1162466_+	ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.8e-126	70.2
SQF18014.1\|1162440_1163754_+	chloride channel protein	NA	NA	NA	NA
SQF18015.1\|1163849_1164095_+\|transposase	transposase	NA	NA	NA	NA
SQF18016.1\|1164573_1164999_+	Transposase	A0A1P8CWQ3	Bacillus_phage	2.5e-27	44.1
SQF18017.1\|1165096_1165792_-\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQF18018.1\|1165810_1166572_-	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF18019.1\|1166568_1166790_-	XRE family transcriptional regulator	NA	NA	NA	NA
SQF18020.1\|1167143_1169762_-\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	5.1e-62	34.1

DBSCAN-SWA_10

1178427 : 1251775

Streptococcus_phage(67.69%)

portal,transposase,tRNA,tail,integrase,terminase,protease,holin,capsid

attL 1207503:1207522|attR 1249160:1249179

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF18028.1\|1178427_1179456_+\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQF18029.1\|1179495_1180683_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF18030.1\|1180796_1181387_-	S11 family peptidase	NA	NA	NA	NA
SQF18031.1\|1181383_1181632_-	lipoprotein	NA	NA	NA	NA
SQF18032.1\|1181687_1181834_-	Uncharacterised protein	NA	NA	NA	NA
SQF18033.1\|1182000_1182606_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
SQF18034.1\|1182702_1183743_-	DNA polymerase III subunit delta	NA	NA	NA	NA
SQF18035.1\|1183834_1186033_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	9.0e-52	59.4
SQF18036.1\|1186037_1186700_-	comE operon 1 domain-containing protein	NA	NA	NA	NA
SQF18037.1\|1186899_1187802_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQF18038.1\|1187806_1188940_-\|transposase	transposase	NA	NA	NA	NA
SQF18039.1\|1189083_1189860_+	methyltransferase	NA	NA	NA	NA
SQF18040.1\|1189849_1190128_+	GIY-YIG catalytic domain-containing protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
SQF18041.1\|1190151_1192152_-	Kup system potassium uptake protein	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	5.8e-66	34.0
SQF18042.1\|1192278_1193898_-	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
SQF18043.1\|1194204_1195749_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.8e-35	29.0
SQF18044.1\|1195996_1196692_-	integral membrane family protein	NA	NA	NA	NA
SQF18045.1\|1196771_1198163_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
SQF18046.1\|1198353_1199400_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
SQF18047.1\|1199500_1200097_-	recombination protein	NA	NA	NA	NA
SQF18048.1\|1200894_1201674_-	formate transporter	NA	NA	NA	NA
SQF18049.1\|1201797_1202340_-	membrane protein	NA	NA	NA	NA
SQF18050.1\|1202500_1203022_-	3H domain-containing protein	NA	NA	NA	NA
SQF18051.1\|1203128_1203824_-	phosphoglyceromutase	NA	NA	NA	NA
SQF18052.1\|1204062_1204998_+	dihydroorotate dehydrogenase 1A	A0A1V0SH91	Hokovirus	3.0e-65	44.8
SQF18053.1\|1205297_1207160_-	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	5.4e-90	34.1
1207503:1207522	attL	NA	NA	NA	NA
SQF18054.1\|1207692_1207875_-	paratox	A3F673	Streptococcus_phage	3.1e-19	76.7
SQF18055.1\|1208114_1208873_+	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA
SQF18056.1\|1208983_1209691_+	exotoxin type C	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1
SQF18057.1\|1209759_1210512_-	phage-associated cell wall hydrolase	A3F665	Streptococcus_phage	7.9e-141	96.8
SQF18058.1\|1210517_1210628_-	putative phage membrane protein	NA	NA	NA	NA
SQF18059.1\|1210629_1211085_-\|holin	holin	A0A0M4R3G6	Streptococcus_phage	2.3e-63	81.5
SQF18060.1\|1211095_1211734_-	phage protein	A3F662	Streptococcus_phage	1.2e-44	53.7
SQF18061.1\|1211736_1212165_-	phage protein	A3F661	Streptococcus_phage	1.7e-63	86.5
SQF18062.1\|1212176_1214063_-	gp58-like family protein	Q938J9	Temperate_phage	1.3e-203	86.5
SQF18063.1\|1214075_1215098_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.2e-168	91.7
SQF18064.1\|1215094_1217239_-	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	93.1
SQF18065.1\|1217235_1217943_-	phage protein	Q938K2	Temperate_phage	1.7e-92	71.1
SQF18066.1\|1217942_1221866_-\|tail	phage tail protein	J7KDT4	Streptococcus_phage	1.9e-238	48.7
SQF18067.1\|1221878_1222046_-	phage protein	J7KBS0	Streptococcus_phage	2.9e-19	87.3
SQF18068.1\|1222075_1222402_-	phage protein	J7KK85	Streptococcus_phage	6.0e-37	73.1
SQF18069.1\|1222454_1223063_-\|tail	major tail protein	J7KKC8	Streptococcus_phage	2.3e-74	70.5
SQF18070.1\|1223079_1223505_-	phage protein	J7KBZ9	Streptococcus_phage	5.0e-68	85.1
SQF18071.1\|1223501_1223879_-	phage protein	J7KDM3	Streptococcus_phage	1.4e-45	72.8
SQF18072.1\|1223875_1224223_-	phage protein	J7KJ42	Streptococcus_phage	1.5e-49	85.5
SQF18073.1\|1224219_1224522_-	phage protein	J7KC36	Streptococcus_phage	6.1e-44	87.0
SQF18074.1\|1224657_1225860_-\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	6.0e-135	64.4
SQF18075.1\|1225885_1226551_-\|protease	phage ClpP protease	M1Q115	Streptococcus_phage	4.6e-92	77.7
SQF18076.1\|1226528_1227749_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	2.0e-186	81.7
SQF18077.1\|1227782_1228007_-	phage protein	Q938K9	Temperate_phage	3.6e-17	61.4
SQF18078.1\|1227999_1228170_-	phage protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
SQF18079.1\|1228166_1229921_-\|terminase	phage terminase, large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.2
SQF18080.1\|1229935_1230403_-\|terminase	phage terminase, small subunit	J7KC46	Streptococcus_phage	3.9e-82	98.7
SQF18081.1\|1230573_1230912_-	Phage endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
SQF18082.1\|1231496_1231937_-	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	1.9e-78	99.3
SQF18083.1\|1232212_1232584_-	Uncharacterised protein	NA	NA	NA	NA
SQF18084.1\|1232580_1233291_-	phage protein	Q938L9	Temperate_phage	3.0e-25	46.2
SQF18085.1\|1233293_1233926_-	phage protein	L0P368	Streptococcus_phage	2.3e-85	68.6
SQF18086.1\|1233927_1234212_-	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.4e-37	89.4
SQF18087.1\|1234208_1234613_-	phage protein	A3F627	Streptococcus_phage	1.6e-39	65.2
SQF18088.1\|1234622_1234892_-	phage protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
SQF18089.1\|1234888_1235173_-	phage protein	A0A1P8VVP5	Streptococcus_phage	2.2e-48	96.8
SQF18090.1\|1235218_1235407_-	phage protein	A0A1P8VVV4	Streptococcus_phage	5.0e-20	97.8
SQF18091.1\|1235403_1235760_-	phage protein	A0A1P8VVP9	Streptococcus_phage	4.6e-59	97.5
SQF18092.1\|1235743_1236064_-	phage protein	A0A1P8VVL5	Streptococcus_phage	7.1e-51	94.3
SQF18093.1\|1236060_1236474_-	phage protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.8e-15	50.0
SQF18094.1\|1236735_1238211_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	5.9e-249	86.9
SQF18095.1\|1238200_1239004_-	phage protein	A0A1P8VVM6	Streptococcus_phage	4.3e-153	98.9
SQF18096.1\|1239015_1239474_-	phage protein	A0A1P8VVN0	Streptococcus_phage	5.0e-82	99.3
SQF18097.1\|1239488_1240718_-	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	2.8e-236	99.5
SQF18098.1\|1240819_1241500_-	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQF18099.1\|1241500_1241983_-	phage protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
SQF18100.1\|1242130_1242445_-	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	7.0e-51	96.2
SQF18101.1\|1242460_1242598_-	phage protein	A0A1P8VVR9	Streptococcus_phage	6.4e-17	95.6
SQF18102.1\|1242599_1242911_-	excisionase	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
SQF18103.1\|1242988_1243174_-	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQF18104.1\|1243340_1243580_+	phage protein	NA	NA	NA	NA
SQF18105.1\|1243730_1243940_+	phage protein	NA	NA	NA	NA
SQF18106.1\|1243898_1244144_-	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	1.2e-34	95.1
SQF18107.1\|1244192_1244999_+	protein Ymh	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
SQF18108.1\|1244933_1245200_-	phage protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
SQF18109.1\|1245210_1245450_-	Cro/CI family phage transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	1.4e-35	98.7
SQF18110.1\|1245543_1246143_+	phage protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
SQF18111.1\|1246172_1246331_-	phage protein	A0A097PAP2	Streptococcus_pyogenes_phage	4.8e-24	100.0
SQF18112.1\|1246427_1246529_-	Uncharacterised protein	NA	NA	NA	NA
SQF18113.1\|1246703_1247492_+	Phage transcriptional repressor	A0A1S5SD15	Streptococcus_phage	2.0e-86	63.0
SQF18114.1\|1247501_1247807_+	phage membrane protein	NA	NA	NA	NA
SQF18115.1\|1247929_1249072_+\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
SQF18116.1\|1249161_1249437_-	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
1249160:1249179	attR	NA	NA	NA	NA
SQF18117.1\|1249535_1250123_-	membrane protein	NA	NA	NA	NA
SQF18118.1\|1250100_1250961_-	GDSL family lipase	NA	NA	NA	NA
SQF18119.1\|1250935_1251775_-	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7

DBSCAN-SWA_11

1351805 : 1394421

Streptococcus_pyogenes_phage(59.02%)

portal,transposase,tail,integrase,terminase

attL 1379158:1379173|attR 1394574:1394589

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF18210.1\|1351805_1353161_-	RNA methyltransferase	A0A2K5B251	Erysipelothrix_phage	4.3e-73	32.7
SQF18211.1\|1353351_1353534_-	paratox	J7KBZ4	Streptococcus_phage	1.1e-19	81.4
SQF18212.1\|1353754_1354510_+	exotoxin type A	A0A097PAT7	Streptococcus_pyogenes_phage	2.2e-143	100.0
SQF18213.1\|1354631_1355291_-	phage protein	A0A097PBF7	Streptococcus_pyogenes_phage	8.5e-123	100.0
SQF18214.1\|1355290_1355512_-	phage protein	A0A097PAX7	Streptococcus_pyogenes_phage	2.5e-18	84.5
SQF18215.1\|1355521_1356295_-	phage protein	A0A097PAV0	Streptococcus_pyogenes_phage	3.9e-135	100.0
SQF18216.1\|1356305_1356908_-	phage protein	A0A097PAX9	Streptococcus_pyogenes_phage	7.8e-91	98.8
SQF18217.1\|1356919_1357684_-	phage-associated cell wall hydrolase	A0A097PAT3	Streptococcus_pyogenes_phage	1.5e-150	100.0
SQF18218.1\|1357685_1358018_-	N-acetylmuramoyl-L-alanine amidase	A0A097PBF6	Streptococcus_pyogenes_phage	5.7e-51	100.0
SQF18219.1\|1358017_1358341_-	phage protein	A0A097PAX2	Streptococcus_pyogenes_phage	7.7e-53	100.0
SQF18220.1\|1358354_1358477_-	phage protein	A0A097PAU6	Streptococcus_pyogenes_phage	2.4e-15	97.5
SQF18221.1\|1358490_1358838_-	phage protein	A0A097PAX5	Streptococcus_pyogenes_phage	3.5e-59	100.0
SQF18222.1\|1358848_1360711_-	phage structural protein	A0A097PAT0	Streptococcus_pyogenes_phage	0.0e+00	99.7
SQF18223.1\|1360715_1364156_-	phage protein	A0A097PBF5	Streptococcus_pyogenes_phage	0.0e+00	99.9
SQF18224.1\|1364156_1365641_-\|tail	siphovirus tail component family protein	A0A097PAW9	Streptococcus_pyogenes_phage	4.3e-292	99.8
SQF18225.1\|1365641_1367051_-	phage, tape measure protein	A0A097PAU2	Streptococcus_pyogenes_phage	2.1e-219	99.4
SQF18226.1\|1367079_1367448_-	phage protein	A0A097PAU2	Streptococcus_pyogenes_phage	5.4e-18	92.2
SQF18227.1\|1367440_1367899_-	phage protein	A0A097PAX1	Streptococcus_pyogenes_phage	8.6e-82	99.3
SQF18228.1\|1367871_1368189_-	phage protein	A0A097PAS6	Streptococcus_pyogenes_phage	4.9e-52	100.0
SQF18229.1\|1368201_1368708_-	antigen A	A0A097PBF4	Streptococcus_pyogenes_phage	2.6e-79	100.0
SQF18230.1\|1368719_1369130_-	antigen B	A0A097PAW5	Streptococcus_pyogenes_phage	1.4e-70	100.0
SQF18231.1\|1369131_1369515_-	antigen C	A0A097PAT9	Streptococcus_pyogenes_phage	1.7e-59	100.0
SQF18232.1\|1369523_1369835_-	phage protein	A0A097PAW7	Streptococcus_pyogenes_phage	2.6e-50	99.0
SQF18233.1\|1369831_1370176_-	phage protein	A0A097PAS2	Streptococcus_pyogenes_phage	1.1e-54	100.0
SQF18234.1\|1370189_1370483_-	phage protein	A0A097PBF3	Streptococcus_pyogenes_phage	2.0e-47	100.0
SQF18235.1\|1370495_1371386_-	phage protein	A0A097PAW2	Streptococcus_pyogenes_phage	8.6e-86	99.4
SQF18236.1\|1371403_1371976_-	phage scaffold protein	A0A097PAW3	Streptococcus_pyogenes_phage	1.2e-72	100.0
SQF18237.1\|1372125_1372392_-	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	2.6e-38	100.0
SQF18238.1\|1372398_1373307_-	phage protein	A0A097PBF2	Streptococcus_pyogenes_phage	4.2e-88	100.0
SQF18239.1\|1373275_1374601_-\|portal	portal protein	A0A097PAT2	Streptococcus_pyogenes_phage	7.4e-243	100.0
SQF18240.1\|1374600_1375875_-\|terminase	terminase large subunit	A0A097PAV9	Streptococcus_pyogenes_phage	1.1e-251	100.0
SQF18241.1\|1375864_1376245_-	phage protein	A0A097PAR5	Streptococcus_pyogenes_phage	1.0e-64	100.0
SQF18242.1\|1376854_1377289_-	autolysin regulatory protein	J7KDQ1	Streptococcus_phage	2.2e-71	94.4
SQF18243.1\|1377573_1377744_-	phage protein	A0A097PAS8	Streptococcus_pyogenes_phage	2.9e-27	100.0
SQF18244.1\|1377740_1378244_-	phage protein	A0A097PAV5	Streptococcus_pyogenes_phage	2.2e-91	98.2
SQF18245.1\|1378530_1378716_-	phage protein	A0A097PBF0	Streptococcus_pyogenes_phage	7.0e-27	100.0
SQF18246.1\|1378881_1379217_-	Uncharacterised protein	A0A097PAS4	Streptococcus_pyogenes_phage	4.7e-45	100.0
1379158:1379173	attL	NA	NA	NA	NA
SQF18247.1\|1379219_1379504_-	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	5.0e-40	91.5
SQF18248.1\|1379500_1379671_-	phage protein	Q938M0	Temperate_phage	2.5e-10	96.8
SQF18249.1\|1379667_1380081_-	phage protein	Q938M1	Temperate_phage	1.2e-34	63.1
SQF18250.1\|1380077_1380362_-	phage protein	A0A1P8VVP5	Streptococcus_phage	2.7e-49	97.9
SQF18251.1\|1380355_1380607_-	phage protein	A0A1P8VVV4	Streptococcus_phage	3.4e-40	92.8
SQF18252.1\|1380603_1380960_-	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	1.8e-58	95.8
SQF18253.1\|1380943_1381264_-	phage protein	A0A1P8VVL5	Streptococcus_phage	5.8e-53	99.1
SQF18254.1\|1381409_1382273_-\|transposase	transposase	NA	NA	NA	NA
SQF18255.1\|1382477_1383959_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	4.2e-295	99.4
SQF18256.1\|1383948_1384752_-	phage protein	A0A1P8VVM6	Streptococcus_phage	4.3e-153	98.9
SQF18257.1\|1384763_1385222_-	phage protein	A0A1P8VVN0	Streptococcus_phage	5.0e-82	99.3
SQF18258.1\|1385236_1386466_-	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	2.8e-236	99.5
SQF18259.1\|1386567_1387248_-	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQF18260.1\|1387248_1387731_-	phage protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
SQF18261.1\|1387878_1388193_-	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	7.0e-51	96.2
SQF18262.1\|1388208_1388346_-	phage protein	A0A1P8VVR9	Streptococcus_phage	9.2e-16	91.1
SQF18263.1\|1388376_1388628_-	phage protein	A0A1P8VVV6	Streptococcus_phage	1.4e-41	98.8
SQF18264.1\|1388722_1388941_-	Transcriptional regulator, Cro family	A0A1P8VVR5	Streptococcus_phage	4.1e-34	100.0
SQF18265.1\|1389129_1389489_+	Transcriptional regulator, MerR family	A0A1P8VVN3	Streptococcus_phage	1.8e-58	98.3
SQF18266.1\|1389472_1389850_+	cI-like repressor	A0A1P8VVK5	Streptococcus_phage	4.0e-69	100.0
SQF18267.1\|1389860_1390013_+	phage protein	A0A1P8VVQ0	Streptococcus_phage	5.2e-20	100.0
SQF18268.1\|1390183_1390870_+	phage protein	A0A1P8VVT3	Streptococcus_phage	4.8e-121	99.1
SQF18269.1\|1391043_1391712_+\|integrase	phage integrase	C5J953	Streptococcus_phage	8.8e-51	47.2
SQF18270.1\|1391735_1392128_+\|integrase	phage integrase	A0A1S5SEH2	Streptococcus_phage	1.9e-13	48.6
SQF18271.1\|1392275_1393052_+	recX family protein	NA	NA	NA	NA
SQF18272.1\|1393131_1393665_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF18273.1\|1394034_1394421_+\|transposase	transposase	A0A1X9I619	Streptococcus_phage	2.1e-25	56.7
1394574:1394589	attR	NA	NA	NA	NA

DBSCAN-SWA_12

1679401 : 1750249

Synechococcus_phage(11.11%)

bacteriocin,transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF18534.1\|1679401_1680745_-\|tRNA	cysteinyl-tRNA synthetase	A0A1V0SAQ2	Catovirus	8.5e-53	30.1
SQF18535.1\|1680772_1681003_-	Uncharacterised protein	NA	NA	NA	NA
SQF18536.1\|1681481_1682063_-	serine acetyl transferase	NA	NA	NA	NA
SQF18537.1\|1682071_1682824_-	polynucleotide phosphorylase/polyadenylase	NA	NA	NA	NA
SQF18538.1\|1685228_1685957_-	translaldolase	H8ZNI7	Synechococcus_phage	8.4e-15	33.0
SQF18539.1\|1685969_1687349_-	PTS system ascorbate-specific transporter subunit IIC	NA	NA	NA	NA
SQF18540.1\|1687375_1687660_-	PTS system transporter subunit IIB	NA	NA	NA	NA
SQF18541.1\|1687652_1689713_-	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA
SQF18542.1\|1690064_1690334_-	30S ribosomal protein S15	NA	NA	NA	NA
SQF18543.1\|1690509_1690710_-	Uncharacterised protein	NA	NA	NA	NA
SQF18544.1\|1691218_1691833_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.3e-13	38.9
SQF18545.1\|1691866_1692409_-	oxidoreductase	NA	NA	NA	NA
SQF18546.1\|1692538_1692967_-	MarR family transcriptional regulator	NA	NA	NA	NA
SQF18547.1\|1693076_1697474_-	DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	1.7e-17	40.8
SQF18548.1\|1697727_1699584_-\|tRNA	prolyl-tRNA synthetase	A0A2K9L297	Tupanvirus	4.1e-05	24.6
SQF18549.1\|1699781_1701041_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
SQF18550.1\|1701113_1701908_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
SQF18551.1\|1701920_1702670_-	undecaprenyl pyrophosphate synthase	R9W0U9	Flavobacterium_phage	9.6e-22	41.7
SQF18552.1\|1702898_1703264_-	preprotein translocase subunit YajC	NA	NA	NA	NA
SQF18553.1\|1703379_1703727_-\|bacteriocin	bacteriocin transporter	NA	NA	NA	NA
SQF18554.1\|1703868_1707366_-	pullulanase	NA	NA	NA	NA
SQF18555.1\|1707755_1709363_-	glucan 1,6-alpha-glucosidase	NA	NA	NA	NA
SQF18556.1\|1709491_1710625_-	Multiple sugar-binding transport ATP-binding protein msmK	G3M9Y6	Bacillus_virus	1.1e-24	32.9
SQF18557.1\|1710922_1711771_-	leucine rich protein	NA	NA	NA	NA
SQF18558.1\|1712130_1713453_+	streptokinase C	NA	NA	NA	NA
SQF18559.1\|1713550_1713994_-\|tRNA	D-tyrosyl-tRNA deacylase	NA	NA	NA	NA
SQF18560.1\|1714008_1716228_-	GTP pyrophosphokinase	A0A1S6L1R3	Vibrio_phage	1.5e-06	36.9
SQF18561.1\|1716479_1716755_-	collagen-like protein	NA	NA	NA	NA
SQF18562.1\|1716905_1717325_-	collagen-like protein	NA	NA	NA	NA
SQF18563.1\|1717725_1718859_+\|transposase	transposase	NA	NA	NA	NA
SQF18564.1\|1718863_1718998_+	hupothetical protein	NA	NA	NA	NA
SQF18565.1\|1719032_1719515_+	nrdI Flavodoxin like family protein	NA	NA	NA	NA
SQF18566.1\|1719909_1720728_-	putative RgfB protein	NA	NA	NA	NA
SQF18567.1\|1720806_1722993_-	PTS system, glucose-specific II ABC component	A0A2I7SAJ6	Vibrio_phage	1.9e-06	43.0
SQF18568.1\|1723354_1724104_-	16S ribosomal RNA methyltransferase	NA	NA	NA	NA
SQF18569.1\|1724103_1725057_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
SQF18570.1\|1725127_1725598_-	Protein of uncharacterised function (DUF3013)	NA	NA	NA	NA
SQF18571.1\|1725653_1725755_-	RhuM	NA	NA	NA	NA
SQF18572.1\|1726291_1727155_+\|transposase	transposase	NA	NA	NA	NA
SQF18573.1\|1727298_1727640_-	Uncharacterised protein	NA	NA	NA	NA
SQF18574.1\|1728436_1730194_+	para-aminobenzoate synthetase componentI/4-amino-4-deoxychorismate lyase	A0A0B5J984	Pandoravirus	1.2e-38	30.1
SQF18575.1\|1730226_1730793_+	anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.5e-32	42.4
SQF18576.1\|1730825_1732094_+	Chromosome segregation helicase	A0A127AWE7	Bacillus_phage	4.5e-96	46.9
SQF18577.1\|1732592_1733033_+	acetyltransferase	NA	NA	NA	NA
SQF18578.1\|1733087_1733558_+	topology modulation protein	A0A097BYE2	Leuconostoc_phage	2.1e-27	42.3
SQF18579.1\|1733842_1734544_+	mitogenic exotoxin Z	A0EX09	Staphylococcus_phage	7.3e-16	36.2
SQF18580.1\|1734870_1735095_-	putative cytoplasmic protein	NA	NA	NA	NA
SQF18581.1\|1735273_1736902_+	Glutathione-binding protein gsiB	NA	NA	NA	NA
SQF18582.1\|1737014_1737992_+	oligopeptide ABC transporter (permease)	NA	NA	NA	NA
SQF18583.1\|1737988_1738810_+	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	NA	NA	NA	NA
SQF18584.1\|1738821_1739625_+	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	W6JKT0	Anomala_cuprea_entomopoxvirus	6.5e-08	23.9
SQF18585.1\|1739608_1740235_+	Dipeptide transport ATP-binding protein dppF	A0A2H4P6Z4	Pseudomonas_phage	1.0e-05	26.1
SQF18586.1\|1740317_1740518_-	CsbD-like protein	J7KJ36	Streptococcus_phage	1.3e-21	86.4
SQF18587.1\|1740686_1743158_-	histidine triad protein	NA	NA	NA	NA
SQF18588.1\|1743170_1744091_-	Laminin-binding surface protein	NA	NA	NA	NA
SQF18589.1\|1744268_1745402_-\|transposase	transposase	NA	NA	NA	NA
SQF18590.1\|1745652_1749156_-	C5A peptidase	NA	NA	NA	NA
SQF18591.1\|1749589_1750249_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.9e-114	91.3

DBSCAN-SWA_13

1845371 : 1861090

Streptococcus_phage(61.54%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF19145.1\|1845371_1846163_-	transcriptional regulator	A0A1S5SE31	Streptococcus_phage	7.5e-09	48.5
SQF19147.1\|1846254_1846488_+	transcriptional regulator	NA	NA	NA	NA
SQF19149.1\|1846542_1846950_+	phage protein	A0A1X9I5V7	Streptococcus_phage	1.3e-49	69.4
SQF19150.1\|1846963_1847581_+	pRha family phage regulatory protein	A0A159B6D5	Gordonia_phage	2.2e-11	38.8
SQF19152.1\|1847814_1848156_+	phage protein	NA	NA	NA	NA
SQF19155.1\|1848142_1848364_+	Uncharacterised protein	NA	NA	NA	NA
SQF19157.1\|1848366_1848558_+	phage protein	NA	NA	NA	NA
SQF19159.1\|1848569_1848899_+	phage protein	NA	NA	NA	NA
SQF19161.1\|1848901_1849174_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
SQF19163.1\|1849174_1850032_+	replication protein	A0A1X9I6L2	Streptococcus_phage	4.5e-124	74.8
SQF19165.1\|1850000_1851689_+	phage/plasmid primase, P4 family, C-terminal domain protein	A0A1X9I717	Streptococcus_phage	2.5e-259	82.1
SQF19167.1\|1851975_1852149_+	Uncharacterised protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
SQF19169.1\|1852154_1852328_+	phage protein	NA	NA	NA	NA
SQF19171.1\|1852329_1852839_+	phage protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
SQF19173.1\|1852912_1853401_+	phage protein	A0A1X9I5V2	Streptococcus_phage	1.4e-45	54.9
SQF19175.1\|1853799_1854162_+	phage protein	A0A2H4JFS1	uncultured_Caudovirales_phage	1.3e-05	29.9
SQF19177.1\|1854136_1854520_+	phage protein	Q938L8	Temperate_phage	3.7e-14	41.7
SQF19179.1\|1854720_1855383_+	secreted phage protein	NA	NA	NA	NA
SQF19180.1\|1855779_1858335_-	DNA mismatch repair protein mutS	A0A1V0SGG8	Hokovirus	3.0e-43	23.4
SQF19182.1\|1858321_1858528_-	cytoplasmic protein	NA	NA	NA	NA
SQF19184.1\|1858670_1859108_-	arginine repressor	NA	NA	NA	NA
SQF19186.1\|1859398_1861090_+\|tRNA	arginyl-tRNA synthetase	A0A2I2L3K1	Orpheovirus	7.1e-73	32.2

Anti-CRISPR protein detection

Acr_ID: LS483335.1|SQF17865.1|1039648_1039783_-|phage-protein

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Acr_ID: LS483335.1|SQF17866.1|1039779_1040076_-|phage-protein

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Acr_ID: LS483335.1|SQF17874.1|1042488_1042623_-|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF17875.1|1042658_1042817_-|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF17882.1|1047170_1047317_+|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF17883.1|1047457_1047709_+|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF17884.1|1047972_1048212_+|Phage-protein

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Acr_ID: LS483335.1|SQF17904.1|1064150_1064324_-|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF17919.1|1073764_1074046_-|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF17921.1|1074449_1074671_-|Uncharacterised-protein

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Acr_ID: LS483335.1|SQF18101.1|1242460_1242598_-|phage-protein

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Acr_ID: LS483335.1|SQF18102.1|1242599_1242911_-|excisionase

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

LS483335.1|SQF17865.1|1039648_1039783_-|phage-protein

1039648_1039783_-

44 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17866.1|1039779_1040076_-|phage-protein

1039779_1040076_-

98 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17874.1|1042488_1042623_-|Uncharacterised-protein

1042488_1042623_-

44 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17875.1|1042658_1042817_-|Uncharacterised-protein

1042658_1042817_-

52 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17882.1|1047170_1047317_+|Uncharacterised-protein

1047170_1047317_+

48 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17883.1|1047457_1047709_+|Uncharacterised-protein

1047457_1047709_+

83 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17884.1|1047972_1048212_+|Phage-protein

1047972_1048212_+

79 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17904.1|1064150_1064324_-|Uncharacterised-protein

1064150_1064324_-

57 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17919.1|1073764_1074046_-|Uncharacterised-protein

1073764_1074046_-

93 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF17921.1|1074449_1074671_-|Uncharacterised-protein

1074449_1074671_-

73 aa aa

972534-1104277

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1052505-1052537	1
LS483335_3	TypeI	3.2\|1310113\|33\|LS483335\|CRT	1310113-1310145	33	1011545-1011577	2
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1052505-1052538	1
LS483335_3	TypeI	3.5\|1310114\|34\|LS483335\|PILER-CR	1310114-1310147	34	1011545-1011578	2

1. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1052505-1052537, mismatch: 1

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcaccagatagcctcaagagggac	Protospacer
****************** **************

2. spacer 3.2|1310113|33|LS483335|CRT matches to LS483335 position: 1011545-1011577, mismatch: 2

atgatactgtcaccagattgcctcaagagggac	CRISPR spacer
atgatactgtcgccagattgccgcaagagggac	Protospacer
***********.********** **********

3. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1052505-1052538, mismatch: 1

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcaccagatagcctcaagagggact	Protospacer
****************** ***************

4. spacer 3.5|1310114|34|LS483335|PILER-CR matches to LS483335 position: 1011545-1011578, mismatch: 2

atgatactgtcaccagattgcctcaagagggact	CRISPR spacer
atgatactgtcgccagattgccgcaagagggact	Protospacer
***********.********** ***********

LS483335.1|SQF18101.1|1242460_1242598_-|phage-protein

1242460_1242598_-

45 aa aa

1178427-1251775

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
LS483335_3	TypeI	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	1233317-1233284
LS483335_3	TypeI	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	1233317-1233283
LS483335_3	TypeI	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	1233317-1233282

1. spacer 3.1|1310046|34|LS483335|CRT matches to LS483335 position: 1233317-1233284, mismatch: 0

gagagtaagttaaatgcgaggtaaaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacat	Protospacer
**********************************

2. spacer 3.4|1310047|35|LS483335|PILER-CR matches to LS483335 position: 1233317-1233283, mismatch: 0

gagagtaagttaaatgcgaggtaaaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatt	Protospacer
***********************************

3. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to LS483335 position: 1233317-1233282, mismatch: 0

gagagtaagttaaatgcgaggtaaaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatta	Protospacer
************************************

LS483335.1|SQF18102.1|1242599_1242911_-|excisionase

1242599_1242911_-

103 aa aa

1178427-1251775

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
LS483335_3	TypeI	3.1\|1310046\|34\|LS483335\|CRT	1310046-1310079	34	1233317-1233284
LS483335_3	TypeI	3.4\|1310047\|35\|LS483335\|PILER-CR	1310047-1310081	35	1233317-1233283
LS483335_3	TypeI	3.7\|1310046\|36\|LS483335\|CRISPRCasFinder	1310046-1310081	36	1233317-1233282

1. spacer 3.1|1310046|34|LS483335|CRT matches to LS483335 position: 1233317-1233284, mismatch: 0

gagagtaagttaaatgcgaggtaaaaatgaacat	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacat	Protospacer
**********************************

2. spacer 3.4|1310047|35|LS483335|PILER-CR matches to LS483335 position: 1233317-1233283, mismatch: 0

gagagtaagttaaatgcgaggtaaaaatgaacatt	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatt	Protospacer
***********************************

3. spacer 3.7|1310046|36|LS483335|CRISPRCasFinder matches to LS483335 position: 1233317-1233282, mismatch: 0

gagagtaagttaaatgcgaggtaaaaatgaacatta	CRISPR spacer
gagagtaagttaaatgcgaggtaaaaatgaacatta	Protospacer
************************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483335

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information