CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483344	Streptococcus pyogenes strain NCTC12840 genome assembly, chromosome: 1	2 crisprs	cas3,cas3HD,cas5,cas8c,cas7,cas4,cas1,cas2,csm6,DinG,DEDDh,csa3	2	9	12	4

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483344_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483344_1

279198-279428

TypeI

I-C

Consensus_repeat	Method
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	PILER-CR
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	CRISPRCasFinder
GTCTCACCCTTCATGGGTGAGTGGATTGAAATA	CRT

3 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD

The CRISPR arrays of LS483344_1

>merge|LS483344|1|279198-279428|PILER-CR,CRISPRCasFinder,CRT
GTCTCGCCCTTCATGGGTGAGTGGATTGAAATTTTGTTGATAATAACTTCGTCTTCGACGCGACCGTCTCACCCTTTATGGGTGAGTGGATTGAAATAGTCCCTCTTGAGGCAATCTGGTGACAGTATCATGTCTCACCCTTCATGGGTGAGTGGATTGAAATAATGTTCATTTTTACCTCGCATTTAACTTACTCTCGTCTCACCCTTCATGGGTGAGTGGATTGAAAGA

>LS483344|1|1|279198-279427|PILER-CR
GTCTCGCCCTTCATGGGTGAGTGGATTGAAAT	TTTGTTGATAATAACTTCGTCTTCGACGCGACC
GTCTCACCCTTTATGGGTGAGTGGATTGAAAT	AGTCCCTCTTGAGGCAATCTGGTGACAGTATCAT
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AATGTTCATTTTTACCTCGCATTTAACTTACTCTC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAG

>LS483344|1|1|279198-279426|CRISPRCasFinder
GTCTCGCCCTTCATGGGTGAGTGGATTGAAA	TTTTGTTGATAATAACTTCGTCTTCGACGCGACC
GTCTCACCCTTTATGGGTGAGTGGATTGAAA	TAGTCCCTCTTGAGGCAATCTGGTGACAGTATCAT
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	TAATGTTCATTTTTACCTCGCATTTAACTTACTCTC
GTCTCACCCTTCATGGGTGAGTGGATTGAAA

>LS483344|1|1|279198-279428|CRT
GTCTCGCCCTTCATGGGTGAGTGGATTGAAATT	TTGTTGATAATAACTTCGTCTTCGACGCGACC
GTCTCACCCTTTATGGGTGAGTGGATTGAAATA	GTCCCTCTTGAGGCAATCTGGTGACAGTATCAT
GTCTCACCCTTCATGGGTGAGTGGATTGAAATA	ATGTTCATTTTTACCTCGCATTTAACTTACTCTC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAGA

Protein	Signature genes	Signature genes Name	Protein_function
LS483344.1\|SQF35596.1\|280309_280933_+\|disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|239264
LS483344.1\|SQF35602.1\|284712_285792_+\|cytoplasmic-protein	unknown	unknown	gnl\|CDD\|225197
LS483344.1\|SQF35594.1\|278755_279049_+\|hypothetical-cytosolic-protein	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
LS483344.1\|SQF35587.1\|276209_277058_+\|putative-cytoplasmic-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
LS483344.1\|SQF35598.1\|282169_282910_+\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483344.1\|SQF35609.1\|287212_287893_+\|Fumarate-and-nitrate-reduction-regulatory-protein	unknown	unknown	gnl\|CDD\|223736
LS483344.1\|SQF35607.1\|286597_287071_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
LS483344.1\|SQF35589.1\|277059_277734_+\|RecB-family-exonuclease	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
LS483344.1\|SQF35595.1\|279586_280297_+\|cytochrome-c-type-biogenesis-protein	unknown	unknown	gnl\|CDD\|223856
LS483344.1\|SQF35580.1\|271588_273448_+\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483344.1\|SQF35597.1\|280975_282082_+\|bifunctional-methionine-sulfoxide-reductase-A/B	unknown	unknown	gnl\|CDD\|184456
LS483344.1\|SQF35604.1\|285814_286531_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483344.1\|SQF35582.1\|273398_274310_+\|CRISPR-associated-protein-cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
LS483344.1\|SQF35600.1\|282906_284640_+\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483344.1\|SQF35591.1\|277730_278363_+\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483344.1\|SQF35578.1\|268235_270887_+\|valyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235582
LS483344.1\|SQF35611.1\|288166_289402_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
LS483344.1\|SQF35579.1\|271040_271547_+\|ATP-dependent-RNA-helicase	cas3HD	cd09641_cas3HD_CAS-I	gnl\|CDD\|193608
LS483344.1\|SQF35593.1\|278328_278745_+\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483344.1\|SQF35584.1\|274309_276205_+\|CRISPR-associated-protein,-Csd1-family	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839

Protein	Function_ID	Function_description	E-value
LS483344.1\|SQF35596.1\|280309_280933_+\|disulfide-interchange-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.12746e-34
LS483344.1\|SQF35602.1\|284712_285792_+\|cytoplasmic-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.05813e-33
LS483344.1\|SQF35594.1\|278755_279049_+\|hypothetical-cytosolic-protein	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
LS483344.1\|SQF35587.1\|276209_277058_+\|putative-cytoplasmic-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.21991e-159
LS483344.1\|SQF35598.1\|282169_282910_+\|two-component-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.46705e-83
LS483344.1\|SQF35609.1\|287212_287893_+\|Fumarate-and-nitrate-reduction-regulatory-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40
LS483344.1\|SQF35607.1\|286597_287071_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.23847e-66
LS483344.1\|SQF35589.1\|277059_277734_+\|RecB-family-exonuclease	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.18604e-43
LS483344.1\|SQF35595.1\|279586_280297_+\|cytochrome-c-type-biogenesis-protein	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	4.54755e-43
LS483344.1\|SQF35580.1\|271588_273448_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.96215e-135
LS483344.1\|SQF35597.1\|280975_282082_+\|bifunctional-methionine-sulfoxide-reductase-A/B	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	1.02229e-162
LS483344.1\|SQF35604.1\|285814_286531_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.24939e-103
LS483344.1\|SQF35582.1\|273398_274310_+\|CRISPR-associated-protein-cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.39512e-116
LS483344.1\|SQF35600.1\|282906_284640_+\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.90982e-64
LS483344.1\|SQF35591.1\|277730_278363_+\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	1.18968e-106
LS483344.1\|SQF35578.1\|268235_270887_+\|valyl-tRNA-synthetase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
LS483344.1\|SQF35611.1\|288166_289402_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
LS483344.1\|SQF35579.1\|271040_271547_+\|ATP-dependent-RNA-helicase	gnl\|CDD\|193608	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; HD-like nuclease, specifically digesting double-stranded oligonucleotides and preferably cleaving at G:C pairs; signature gene for Type I.	1.60039e-18
LS483344.1\|SQF35593.1\|278328_278745_+\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	1.4484e-79
LS483344.1\|SQF35584.1\|274309_276205_+\|CRISPR-associated-protein,-Csd1-family	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0

>LS483344.1|SQF35594.1|278755_279049_+|hypothetical-cytosolic-protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>LS483344.1|SQF35593.1|278328_278745_+|DNA-polymerase
MLLPSCLLVTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>LS483344.1|SQF35591.1|277730_278363_+|DNA-polymerase
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDDIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVTALLSFGYV
>LS483344.1|SQF35589.1|277059_277734_+|RecB-family-exonuclease
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>LS483344.1|SQF35587.1|276209_277058_+|putative-cytoplasmic-protein
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEAFWFTHSSKLGNVSSARVFDLLEYNQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>LS483344.1|SQF35584.1|274309_276205_+|CRISPR-associated-protein,-Csd1-family
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFSYYSAEMGQTQYDSFHKQLNNWIDYCEEGDVKKFLTFVQQFILKPEFLTLILDSLIAPDYQHNQLKVTYFDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVIALATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSSLRTPTFHDILNVSYGVDKDRFLELDNDNFKSDQIQKLVASLIDGKPMPLSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNDDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>LS483344.1|SQF35582.1|273398_274310_+|CRISPR-associated-protein-cas5
MTRKEELNTIQLAFTSNSKRKKINKRLLEDLVNLPIIINNYYQFRLFNKIRLQKKQKKESSLYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>LS483344.1|SQF35580.1|271588_273448_+|CRISPR-associated-helicase-Cas3
MSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQAVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEERQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>LS483344.1|SQF35579.1|271040_271547_+|ATP-dependent-RNA-helicase
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLSNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKNYVIMATKI
>LS483344.1|SQF35578.1|268235_270887_+|valyl-tRNA-synthetase
MSKELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKHVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNAAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMQKIKS
>LS483344.1|SQF35595.1|279586_280297_+|cytochrome-c-type-biogenesis-protein
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHMLLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LS483344.1|SQF35596.1|280309_280933_+|disulfide-interchange-protein
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVISPGHQGEKSEADFTKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LS483344.1|SQF35597.1|280975_282082_+|bifunctional-methionine-sulfoxide-reductase-A/B
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDATNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPVSPDVIRYKEDKSFNMTRTEVRSRSGDSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>LS483344.1|SQF35598.1|282169_282910_+|two-component-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLSGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>LS483344.1|SQF35600.1|282906_284640_+|two-component-sensor-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNSEIQDFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNPQLTMKTSSDMMAETWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGMLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTFFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGMGLLACLICGLTTILVLRKWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKPLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDHFTEIQLSLPKMHELMADDTQENE
>LS483344.1|SQF35602.1|284712_285792_+|cytoplasmic-protein
MSLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVEGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDLPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKKHGVAAVRGPRRLSPQLIAFLKEKEYLKENN
>LS483344.1|SQF35604.1|285814_286531_+|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNSQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTTTDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALEFIEGSAKMYLHATPSLHVLDKDNPHVPLFTEN
>LS483344.1|SQF35607.1|286597_287071_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATICGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>LS483344.1|SQF35609.1|287212_287893_+|Fumarate-and-nitrate-reduction-regulatory-protein
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>LS483344.1|SQF35611.1|288166_289402_+|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI

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Crispr_ID: LS483344_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483344_2

512508-512608

Orphan

Consensus_repeat	Method
TATAATTAGACTATACCAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483344_2

>merge|LS483344|2|512508-512608|CRISPRCasFinder
TATAATTAGACTATACCAATTTTATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGGTATAATTAGACTATACCAATTAT

>LS483344|2|2|512508-512608|CRISPRCasFinder
TATAATTAGACTATACCAATTTT	ATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGG
TATAATTAGACTATACCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
LS483344.1\|SQF36082.1\|511926_512484_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LS483344.1\|SQF36087.1\|514669_515005_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|225380
LS483344.1\|SQF36066.1\|503149_503764_+\|membrane-protein	unknown	unknown	gnl\|CDD\|223475
LS483344.1\|SQF36067.1\|503890_504676_-\|ABC-transporter-permease-protein	unknown	unknown	unknown
LS483344.1\|SQF36072.1\|509130_510144_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
LS483344.1\|SQF36091.1\|515762_516392_+\|histidine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483344.1\|SQF36070.1\|505940_509051_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LS483344.1\|SQF36079.1\|510206_511709_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LS483344.1\|SQF36063.1\|501332_502133_-\|streptodornase	unknown	unknown	gnl\|CDD\|372824
LS483344.1\|SQF36068.1\|504685_505360_-\|ABC-transporter-family-protein	unknown	unknown	gnl\|CDD\|224054
LS483344.1\|SQF36094.1\|517612_518386_+\|protein-B	unknown	unknown	gnl\|CDD\|369335
LS483344.1\|SQF36089.1\|515111_515753_+\|histidine-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LS483344.1\|SQF36085.1\|512659_514474_+\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LS483344.1\|SQF36069.1\|505384_505756_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LS483344.1\|SQF36103.1\|521962_524281_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
LS483344.1\|SQF36097.1\|518755_519991_-\|cation-diffusion-facilitator-transporter-family-protein	unknown	unknown	gnl\|CDD\|223131
LS483344.1\|SQF36093.1\|516407_517244_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483344.1\|SQF36064.1\|502370_502559_+\|paratox	unknown	unknown	unknown
LS483344.1\|SQF36100.1\|520110_521433_-\|amino-acid-symporter	unknown	unknown	gnl\|CDD\|224040
LS483344.1\|SQF36105.1\|524643_524892_+\|transglycosylase-associated-family-protein	unknown	unknown	gnl\|CDD\|225170

Protein	Function_ID	Function_description	E-value
LS483344.1\|SQF36082.1\|511926_512484_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
LS483344.1\|SQF36089.1\|515111_515753_+\|histidine-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.36474e-71
LS483344.1\|SQF36066.1\|503149_503764_+\|membrane-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
LS483344.1\|SQF36087.1\|514669_515005_+\|phosphonoacetate-hydrolase	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.87366e-64
LS483344.1\|SQF36091.1\|515762_516392_+\|histidine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.89978e-111
LS483344.1\|SQF36070.1\|505940_509051_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LS483344.1\|SQF36079.1\|510206_511709_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LS483344.1\|SQF36072.1\|509130_510144_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
LS483344.1\|SQF36068.1\|504685_505360_-\|ABC-transporter-family-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.38532e-60
LS483344.1\|SQF36094.1\|517612_518386_+\|protein-B	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	2.99641e-97
LS483344.1\|SQF36085.1\|512659_514474_+\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LS483344.1\|SQF36069.1\|505384_505756_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
LS483344.1\|SQF36103.1\|521962_524281_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
LS483344.1\|SQF36097.1\|518755_519991_-\|cation-diffusion-facilitator-transporter-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.35889e-95
LS483344.1\|SQF36093.1\|516407_517244_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.79673e-109
LS483344.1\|SQF36063.1\|501332_502133_-\|streptodornase	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	7.25745e-26
LS483344.1\|SQF36100.1\|520110_521433_-\|amino-acid-symporter	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LS483344.1\|SQF36105.1\|524643_524892_+\|transglycosylase-associated-family-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13

>LS483344.1|SQF36082.1|511926_512484_+|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LS483344.1|SQF36079.1|510206_511709_+|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LS483344.1|SQF36072.1|509130_510144_+|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LS483344.1|SQF36070.1|505940_509051_+|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLKGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELIIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDYFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LS483344.1|SQF36069.1|505384_505756_-|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LS483344.1|SQF36068.1|504685_505360_-|ABC-transporter-family-protein
MFQNLTVKKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LS483344.1|SQF36067.1|503890_504676_-|ABC-transporter-permease-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTITLAFAIAIVIVPMFNVNELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHNHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LS483344.1|SQF36066.1|503149_503764_+|membrane-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LS483344.1|SQF36064.1|502370_502559_+|paratox
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDYIK
>LS483344.1|SQF36063.1|501332_502133_-|streptodornase
MSKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTGSYQLVLGDLDNLQRPTFAHIQLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDRGHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYYENRLDSWLALHPNFWLDYKVTPVYHKNELVPRQVVLQYVGIDENRDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDYQTGMMLDSTQNEEDSNLETEEFEEAA
>LS483344.1|SQF36085.1|512659_514474_+|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LS483344.1|SQF36087.1|514669_515005_+|phosphonoacetate-hydrolase
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVALDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LS483344.1|SQF36089.1|515111_515753_+|histidine-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKVPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LS483344.1|SQF36091.1|515762_516392_+|histidine-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LS483344.1|SQF36093.1|516407_517244_+|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQNKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LS483344.1|SQF36094.1|517612_518386_+|protein-B
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKDQVQEIKALEEKVINYPDLQPTGRATIYTKAKLNKAIWNTRLERDKKVLGIKPFGVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>LS483344.1|SQF36097.1|518755_519991_-|cation-diffusion-facilitator-transporter-family-protein
MTQDPIANLKLARKGPIVSIIVYLLLSAAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHHTHYRIVKM
>LS483344.1|SQF36100.1|520110_521433_-|amino-acid-symporter
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDASGHISGGPMYYIVNGMGTKWKPLAILFASSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LS483344.1|SQF36103.1|521962_524281_+|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLLDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEASEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LS483344.1|SQF36105.1|524643_524892_+|transglycosylase-associated-family-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	LS483344.1	497038-497071	2	0.941
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	LS483344.1	497039-497071	2	0.939

1. spacer 1.2|279295|34|LS483344|PILER-CR matches to position: 497038-497071, mismatch: 2, identity: 0.941

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

2. spacer 1.8|279296|33|LS483344|CRT matches to position: 497039-497071, mismatch: 2, identity: 0.939

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448946	Streptococcus phage Javan456, complete genome	40569-40601	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448858	Streptococcus phage Javan166, complete genome	42297-42329	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448784	Streptococcus phage Javan505, complete genome	37349-37381	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448769	Streptococcus phage Javan471, complete genome	31700-31732	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448947	Streptococcus phage Javan458, complete genome	37349-37381	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448965	Streptococcus phage Javan506, complete genome	37718-37750	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448684	Streptococcus phage Javan151, complete genome	31700-31732	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448690	Streptococcus phage Javan169, complete genome	38983-39015	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448689	Streptococcus phage Javan163, complete genome	37349-37381	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448974	Streptococcus phage Javan524, complete genome	37349-37381	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448789	Streptococcus phage Javan513, complete genome	37348-37380	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448678	Streptococcus phage Javan135, complete genome	35930-35962	0	1.0
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448953	Streptococcus phage Javan474, complete genome	15561-15595	0	1.0
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448790	Streptococcus phage Javan515, complete genome	12608-12642	0	1.0
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448954	Streptococcus phage Javan476, complete genome	12276-12310	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448946	Streptococcus phage Javan456, complete genome	40569-40600	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448858	Streptococcus phage Javan166, complete genome	42297-42328	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448784	Streptococcus phage Javan505, complete genome	37349-37380	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448769	Streptococcus phage Javan471, complete genome	31700-31731	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448947	Streptococcus phage Javan458, complete genome	37349-37380	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448965	Streptococcus phage Javan506, complete genome	37718-37749	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448684	Streptococcus phage Javan151, complete genome	31700-31731	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448690	Streptococcus phage Javan169, complete genome	38983-39014	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448777	Streptococcus phage Javan491, complete genome	31210-31241	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448689	Streptococcus phage Javan163, complete genome	37349-37380	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448974	Streptococcus phage Javan524, complete genome	37349-37380	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448789	Streptococcus phage Javan513, complete genome	37348-37379	0	1.0
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448678	Streptococcus phage Javan135, complete genome	35930-35961	0	1.0
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448953	Streptococcus phage Javan474, complete genome	15561-15594	0	1.0
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448790	Streptococcus phage Javan515, complete genome	12608-12641	0	1.0
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448954	Streptococcus phage Javan476, complete genome	12276-12309	0	1.0
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448777	Streptococcus phage Javan491, complete genome	31210-31242	1	0.97
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448763	Streptococcus phage Javan451, complete genome	31337-31369	1	0.97
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448676	Streptococcus phage Javan131, complete genome	41326-41358	1	0.97
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448792	Streptococcus phage Javan521, complete genome	33746-33779	1	0.971
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	NC_004584	Streptococcus prophage 315.1, complete genome	33339-33372	1	0.971
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448958	Streptococcus phage Javan486, complete genome	34017-34050	1	0.971
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448770	Streptococcus phage Javan477, complete genome	33746-33779	1	0.971
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448793	Streptococcus phage Javan523, complete genome	35295-35328	1	0.971
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448978	Streptococcus phage Javan532, complete genome	33233-33266	1	0.971
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448785	Streptococcus phage Javan507, complete genome	33234-33267	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448946	Streptococcus phage Javan456, complete genome	40569-40602	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448858	Streptococcus phage Javan166, complete genome	42297-42330	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448784	Streptococcus phage Javan505, complete genome	37349-37382	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448769	Streptococcus phage Javan471, complete genome	31700-31733	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448947	Streptococcus phage Javan458, complete genome	37349-37382	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448965	Streptococcus phage Javan506, complete genome	37718-37751	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448684	Streptococcus phage Javan151, complete genome	31700-31733	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448690	Streptococcus phage Javan169, complete genome	38983-39016	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448689	Streptococcus phage Javan163, complete genome	37349-37382	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448974	Streptococcus phage Javan524, complete genome	37349-37382	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448789	Streptococcus phage Javan513, complete genome	37348-37381	1	0.971
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448678	Streptococcus phage Javan135, complete genome	35930-35963	1	0.971
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448953	Streptococcus phage Javan474, complete genome	15561-15596	1	0.972
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448790	Streptococcus phage Javan515, complete genome	12608-12643	1	0.972
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448954	Streptococcus phage Javan476, complete genome	12276-12311	1	0.972
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448775	Streptococcus phage Javan489, complete genome	38569-38600	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448961	Streptococcus phage Javan494, complete genome	35964-35995	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448794	Streptococcus phage Javan525, complete genome	35698-35729	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448970	Streptococcus phage Javan516, complete genome	42178-42209	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448763	Streptococcus phage Javan451, complete genome	31337-31368	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448953	Streptococcus phage Javan474, complete genome	40290-40321	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448945	Streptococcus phage Javan454, complete genome	36125-36156	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448766	Streptococcus phage Javan465, complete genome	36821-36852	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448765	Streptococcus phage Javan459, complete genome	35696-35727	1	0.969
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448676	Streptococcus phage Javan131, complete genome	41326-41357	1	0.969
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448792	Streptococcus phage Javan521, complete genome	33747-33779	1	0.97
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	NC_004584	Streptococcus prophage 315.1, complete genome	33340-33372	1	0.97
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448958	Streptococcus phage Javan486, complete genome	34018-34050	1	0.97
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448770	Streptococcus phage Javan477, complete genome	33747-33779	1	0.97
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448793	Streptococcus phage Javan523, complete genome	35296-35328	1	0.97
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448978	Streptococcus phage Javan532, complete genome	33234-33266	1	0.97
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448785	Streptococcus phage Javan507, complete genome	33235-33267	1	0.97
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448775	Streptococcus phage Javan489, complete genome	38569-38601	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448961	Streptococcus phage Javan494, complete genome	35964-35996	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448794	Streptococcus phage Javan525, complete genome	35698-35730	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448970	Streptococcus phage Javan516, complete genome	42178-42210	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448953	Streptococcus phage Javan474, complete genome	40290-40322	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448945	Streptococcus phage Javan454, complete genome	36125-36157	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448766	Streptococcus phage Javan465, complete genome	36821-36853	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448765	Streptococcus phage Javan459, complete genome	35696-35728	2	0.939
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MK448793	Streptococcus phage Javan523, complete genome	37480-37512	2	0.939
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448775	Streptococcus phage Javan489, complete genome	36652-36685	2	0.941
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448795	Streptococcus phage Javan527, complete genome	40276-40309	2	0.941
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448953	Streptococcus phage Javan474, complete genome	38373-38406	2	0.941
LS483344_1	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	MK448944	Streptococcus phage Javan452, complete genome	37310-37343	2	0.941
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448960	Streptococcus phage Javan492, complete genome	12194-12228	2	0.943
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448762	Streptococcus phage Javan447, complete genome	12321-12355	2	0.943
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448970	Streptococcus phage Javan516, complete genome	16113-16147	2	0.943
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	NC_004584	Streptococcus prophage 315.1, complete genome	11126-11160	2	0.943
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448978	Streptococcus phage Javan532, complete genome	11021-11055	2	0.943
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448785	Streptococcus phage Javan507, complete genome	11021-11055	2	0.943
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448777	Streptococcus phage Javan491, complete genome	31210-31243	2	0.941
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448763	Streptococcus phage Javan451, complete genome	31337-31370	2	0.941
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448676	Streptococcus phage Javan131, complete genome	41326-41359	2	0.941
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448792	Streptococcus phage Javan521, complete genome	33745-33779	2	0.943
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	NC_004584	Streptococcus prophage 315.1, complete genome	33338-33372	2	0.943
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448958	Streptococcus phage Javan486, complete genome	34016-34050	2	0.943
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448770	Streptococcus phage Javan477, complete genome	33745-33779	2	0.943
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448793	Streptococcus phage Javan523, complete genome	35294-35328	2	0.943
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448978	Streptococcus phage Javan532, complete genome	33232-33266	2	0.943
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448785	Streptococcus phage Javan507, complete genome	33233-33267	2	0.943
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448960	Streptococcus phage Javan492, complete genome	12194-12229	2	0.944
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448762	Streptococcus phage Javan447, complete genome	12321-12356	2	0.944
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448970	Streptococcus phage Javan516, complete genome	16113-16148	2	0.944
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	NC_004584	Streptococcus prophage 315.1, complete genome	11126-11161	2	0.944
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448978	Streptococcus phage Javan532, complete genome	11021-11056	2	0.944
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448785	Streptococcus phage Javan507, complete genome	11021-11056	2	0.944
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MK448793	Streptococcus phage Javan523, complete genome	37480-37511	2	0.938
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448775	Streptococcus phage Javan489, complete genome	36653-36685	2	0.939
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448795	Streptococcus phage Javan527, complete genome	40277-40309	2	0.939
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448953	Streptococcus phage Javan474, complete genome	38374-38406	2	0.939
LS483344_1	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	MK448944	Streptococcus phage Javan452, complete genome	37311-37343	2	0.939
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448960	Streptococcus phage Javan492, complete genome	12194-12227	2	0.941
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448762	Streptococcus phage Javan447, complete genome	12321-12354	2	0.941
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448970	Streptococcus phage Javan516, complete genome	16113-16146	2	0.941
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	NC_004584	Streptococcus prophage 315.1, complete genome	11126-11159	2	0.941
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448978	Streptococcus phage Javan532, complete genome	11021-11054	2	0.941
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448785	Streptococcus phage Javan507, complete genome	11021-11054	2	0.941
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448792	Streptococcus phage Javan521, complete genome	11102-11136	3	0.914
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448770	Streptococcus phage Javan477, complete genome	11102-11136	3	0.914
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448775	Streptococcus phage Javan489, complete genome	38569-38602	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448961	Streptococcus phage Javan494, complete genome	35964-35997	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448794	Streptococcus phage Javan525, complete genome	35698-35731	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448970	Streptococcus phage Javan516, complete genome	42178-42211	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448953	Streptococcus phage Javan474, complete genome	40290-40323	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448945	Streptococcus phage Javan454, complete genome	36125-36158	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448766	Streptococcus phage Javan465, complete genome	36821-36854	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448765	Streptococcus phage Javan459, complete genome	35696-35729	3	0.912
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MK448793	Streptococcus phage Javan523, complete genome	37480-37513	3	0.912
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448775	Streptococcus phage Javan489, complete genome	36651-36685	3	0.914
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448795	Streptococcus phage Javan527, complete genome	40275-40309	3	0.914
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448953	Streptococcus phage Javan474, complete genome	38372-38406	3	0.914
LS483344_1	1.5\|279294\|35\|LS483344\|CRISPRCasFinder	279294-279328	35	MK448944	Streptococcus phage Javan452, complete genome	37309-37343	3	0.914
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448792	Streptococcus phage Javan521, complete genome	11102-11137	3	0.917
LS483344_1	1.6\|279360\|36\|LS483344\|CRISPRCasFinder	279360-279395	36	MK448770	Streptococcus phage Javan477, complete genome	11102-11137	3	0.917
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448792	Streptococcus phage Javan521, complete genome	11102-11135	3	0.912
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448770	Streptococcus phage Javan477, complete genome	11102-11135	3	0.912
LS483344_1	1.3\|279361\|35\|LS483344\|PILER-CR	279361-279395	35	MK448793	Streptococcus phage Javan523, complete genome	12939-12973	7	0.8
LS483344_1	1.9\|279362\|34\|LS483344\|CRT	279362-279395	34	MK448793	Streptococcus phage Javan523, complete genome	12939-12972	7	0.794
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	HQ634175	Cyanophage P-RSM1 genomic sequence	158395-158426	8	0.75
LS483344_1	1.1\|279230\|33\|LS483344\|PILER-CR	279230-279262	33	MT074483	Salmonella phage skrot, complete genome	33069-33101	9	0.727
LS483344_1	1.7\|279231\|32\|LS483344\|CRT	279231-279262	32	MT074483	Salmonella phage skrot, complete genome	33069-33100	9	0.719
LS483344_1	1.4\|279229\|34\|LS483344\|CRISPRCasFinder	279229-279262	34	MT074483	Salmonella phage skrot, complete genome	33069-33102	10	0.706

1. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

2. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

3. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

4. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

5. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

6. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

7. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

8. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

9. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

10. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

11. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

12. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 0, identity: 1.0

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacgcgacc	Protospacer
*********************************

13. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

aatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
aatgttcatttttacctcgcatttaacttactctc	Protospacer
***********************************

14. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

aatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
aatgttcatttttacctcgcatttaacttactctc	Protospacer
***********************************

15. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

aatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
aatgttcatttttacctcgcatttaacttactctc	Protospacer
***********************************

16. spacer 1.7|279231|32|LS483344|CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

17. spacer 1.7|279231|32|LS483344|CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

18. spacer 1.7|279231|32|LS483344|CRT matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

19. spacer 1.7|279231|32|LS483344|CRT matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

20. spacer 1.7|279231|32|LS483344|CRT matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

21. spacer 1.7|279231|32|LS483344|CRT matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

22. spacer 1.7|279231|32|LS483344|CRT matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

23. spacer 1.7|279231|32|LS483344|CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

24. spacer 1.7|279231|32|LS483344|CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

25. spacer 1.7|279231|32|LS483344|CRT matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

26. spacer 1.7|279231|32|LS483344|CRT matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

27. spacer 1.7|279231|32|LS483344|CRT matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

28. spacer 1.7|279231|32|LS483344|CRT matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 0, identity: 1.0

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacgcgacc	Protospacer
********************************

29. spacer 1.9|279362|34|LS483344|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

atgttcatttttacctcgcatttaacttactctc	CRISPR spacer
atgttcatttttacctcgcatttaacttactctc	Protospacer
**********************************

30. spacer 1.9|279362|34|LS483344|CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

atgttcatttttacctcgcatttaacttactctc	CRISPR spacer
atgttcatttttacctcgcatttaacttactctc	Protospacer
**********************************

31. spacer 1.9|279362|34|LS483344|CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

atgttcatttttacctcgcatttaacttactctc	CRISPR spacer
atgttcatttttacctcgcatttaacttactctc	Protospacer
**********************************

32. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 1, identity: 0.97

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttcgacgcgacc	Protospacer
.********************************

33. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 1, identity: 0.97

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttctacgcgacc	Protospacer
************************ ********

34. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 1, identity: 0.97

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttctacgcgacc	Protospacer
************************ ********

35. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

36. spacer 1.2|279295|34|LS483344|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

37. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

38. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

39. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

40. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

41. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.971

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgaggctatctggtgacagtatcat	Protospacer
*************** ******************

42. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

43. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

44. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

45. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

46. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

47. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

48. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

49. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

50. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

51. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

52. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

53. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 1, identity: 0.971

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacgcgacc	Protospacer
.*********************************

54. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.972

taatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
caatgttcatttttacctcgcatttaacttactctc	Protospacer
.***********************************

55. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 1, identity: 0.972

taatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
caatgttcatttttacctcgcatttaacttactctc	Protospacer
.***********************************

56. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 1, identity: 0.972

taatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
caatgttcatttttacctcgcatttaacttactctc	Protospacer
.***********************************

57. spacer 1.7|279231|32|LS483344|CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

58. spacer 1.7|279231|32|LS483344|CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

59. spacer 1.7|279231|32|LS483344|CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

60. spacer 1.7|279231|32|LS483344|CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

61. spacer 1.7|279231|32|LS483344|CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

62. spacer 1.7|279231|32|LS483344|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

63. spacer 1.7|279231|32|LS483344|CRT matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

64. spacer 1.7|279231|32|LS483344|CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

65. spacer 1.7|279231|32|LS483344|CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

66. spacer 1.7|279231|32|LS483344|CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 1, identity: 0.969

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttctacgcgacc	Protospacer
*********************** ********

67. spacer 1.8|279296|33|LS483344|CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

68. spacer 1.8|279296|33|LS483344|CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

69. spacer 1.8|279296|33|LS483344|CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

70. spacer 1.8|279296|33|LS483344|CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

71. spacer 1.8|279296|33|LS483344|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

72. spacer 1.8|279296|33|LS483344|CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

73. spacer 1.8|279296|33|LS483344|CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.97

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgaggctatctggtgacagtatcat	Protospacer
************** ******************

74. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

75. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

76. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

77. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

78. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

79. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

80. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

81. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
cttgttgataataacttcgtcttctacgcgacc	Protospacer
.*********************** ********

82. spacer 1.1|279230|33|LS483344|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.939

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tttgttgataataacttcgtcttcgacacgccc	Protospacer
***************************.** **

83. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.941

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

84. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.941

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

85. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.941

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

86. spacer 1.2|279295|34|LS483344|PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 2, identity: 0.941

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

87. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.943

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgcatttaacttactctc	Protospacer
  *********  ************************

88. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.943

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgcatttaacttactctc	Protospacer
  *********  ************************

89. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.943

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgcatttaacttactctc	Protospacer
  *********  ************************

90. spacer 1.3|279361|35|LS483344|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.943

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgcatttaacttactctc	Protospacer
  *********  ************************

91. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.943

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgcatttaacttactctc	Protospacer
  *********  ************************

92. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.943

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgcatttaacttactctc	Protospacer
  *********  ************************

93. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 2, identity: 0.941

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttcgacgcgacc	Protospacer
..********************************

94. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 2, identity: 0.941

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttctacgcgacc	Protospacer
.************************ ********

95. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.941

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttctacgcgacc	Protospacer
.************************ ********

96. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

97. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

98. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

99. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

100. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

101. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

102. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.943

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgaggctatctggtgacagtatcat	Protospacer
.*************** ******************

103. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.944

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgcatttaacttactctc	Protospacer
  **********  ************************

104. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.944

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgcatttaacttactctc	Protospacer
  **********  ************************

105. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.944

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgcatttaacttactctc	Protospacer
  **********  ************************

106. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.944

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgcatttaacttactctc	Protospacer
  **********  ************************

107. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.944

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgcatttaacttactctc	Protospacer
  **********  ************************

108. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.944

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgcatttaacttactctc	Protospacer
  **********  ************************

109. spacer 1.7|279231|32|LS483344|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.938

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttgataataacttcgtcttcgacacgccc	Protospacer
**************************.** **

110. spacer 1.8|279296|33|LS483344|CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.939

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

111. spacer 1.8|279296|33|LS483344|CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.939

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

112. spacer 1.8|279296|33|LS483344|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.939

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

113. spacer 1.8|279296|33|LS483344|CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 2, identity: 0.939

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

114. spacer 1.9|279362|34|LS483344|CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.941

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgcatttaacttactctc	Protospacer
  ********  ************************

115. spacer 1.9|279362|34|LS483344|CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.941

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgcatttaacttactctc	Protospacer
  ********  ************************

116. spacer 1.9|279362|34|LS483344|CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 2, identity: 0.941

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgcatttaacttactctc	Protospacer
  ********  ************************

117. spacer 1.9|279362|34|LS483344|CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.941

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgcatttaacttactctc	Protospacer
  ********  ************************

118. spacer 1.9|279362|34|LS483344|CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.941

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgcatttaacttactctc	Protospacer
  ********  ************************

119. spacer 1.9|279362|34|LS483344|CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.941

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgcatttaacttactctc	Protospacer
  ********  ************************

120. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.914

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgtatttaacttactctc	Protospacer
  *********  ********.***************

121. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.914

aatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--tgttcattttgttacctcgtatttaacttactctc	Protospacer
  *********  ********.***************

122. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

123. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

124. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

125. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

126. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

127. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

128. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

129. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ccttgttgataataacttcgtcttctacgcgacc	Protospacer
..*********************** ********

130. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 3, identity: 0.912

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ctttgttgataataacttcgtcttcgacacgccc	Protospacer
.***************************.** **

131. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.914

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgcggcaatctggcgacagtatcat	Protospacer
.*********** **********.***********

132. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 3, identity: 0.914

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgcggcaatctggcgacagtatcat	Protospacer
.*********** **********.***********

133. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.914

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgcggcaatctggcgacagtatcat	Protospacer
.*********** **********.***********

134. spacer 1.5|279294|35|LS483344|CRISPRCasFinder matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 3, identity: 0.914

tagtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
cagtccctcttgcggcaatctggcgacagtatcat	Protospacer
.*********** **********.***********

135. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.917

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgtatttaacttactctc	Protospacer
  **********  ********.***************

136. spacer 1.6|279360|36|LS483344|CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.917

taatgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--atgttcattttgttacctcgtatttaacttactctc	Protospacer
  **********  ********.***************

137. spacer 1.9|279362|34|LS483344|CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.912

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgtatttaacttactctc	Protospacer
  ********  ********.***************

138. spacer 1.9|279362|34|LS483344|CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.912

atgttcattt--ttacctcgcatttaacttactctc	CRISPR spacer
--gttcattttgttacctcgtatttaacttactctc	Protospacer
  ********  ********.***************

139. spacer 1.3|279361|35|LS483344|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 7, identity: 0.8

-----aatgttcatttttacctcgcatttaacttactctc	CRISPR spacer
ccaaaagtg-----gtttacctcgcatttaacttactctc	Protospacer
     *.**      *************************

140. spacer 1.9|279362|34|LS483344|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 7, identity: 0.794

-----atgttcatttttacctcgcatttaacttactctc	CRISPR spacer
caaaagtg-----gtttacctcgcatttaacttactctc	Protospacer
     .**      *************************

141. spacer 1.7|279231|32|LS483344|CRT matches to HQ634175 (Cyanophage P-RSM1 genomic sequence) position: , mismatch: 8, identity: 0.75

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ttgttcatattaacttcgtcttcttcctcagc	Protospacer
***** *** *************  * . * *

142. spacer 1.1|279230|33|LS483344|PILER-CR matches to MT074483 (Salmonella phage skrot, complete genome) position: , mismatch: 9, identity: 0.727

tttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
tggattgataataaattcgacttcgacgttgcg	Protospacer
*  .********** **** ********. .*

143. spacer 1.7|279231|32|LS483344|CRT matches to MT074483 (Salmonella phage skrot, complete genome) position: , mismatch: 9, identity: 0.719

ttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
ggattgataataaattcgacttcgacgttgcg	Protospacer
  .********** **** ********. .*

144. spacer 1.4|279229|34|LS483344|CRISPRCasFinder matches to MT074483 (Salmonella phage skrot, complete genome) position: , mismatch: 10, identity: 0.706

ttttgttgataataacttcgtcttcgacgcgacc	CRISPR spacer
gtggattgataataaattcgacttcgacgttgcg	Protospacer
 *  .********** **** ********. .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

174498 : 237635

Streptococcus_pyogenes_phage(53.73%)

transposase,portal,terminase,tRNA,tail,integrase

attL 194852:194867|attR 210268:210283

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF35364.1\|174498_175434_+\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	6.0e-05	38.5
SQF35366.1\|175423_176746_+	16S rRNA m(5)C 967 methyltransferase	NA	NA	NA	NA
SQF35368.1\|176783_177524_+	protein phosphatase 2C	NA	NA	NA	NA
SQF35370.1\|177520_179419_+	serine/threonine-protein kinase PrkC	B5LWE2	Feldmannia_species_virus	1.4e-21	30.7
SQF35372.1\|179541_180234_+	transporter	NA	NA	NA	NA
SQF35374.1\|180230_181235_+	histidine kinase family protein	NA	NA	NA	NA
SQF35376.1\|181227_181869_+	two-component response regulator	NA	NA	NA	NA
SQF35378.1\|181905_183306_+	cyclophilin-type protein	A0A1V0S9I2	Catovirus	6.0e-25	42.3
SQF35380.1\|183305_183683_+	S1 RNA binding domain-containing protein	NA	NA	NA	NA
SQF35382.1\|183700_184642_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	1.6e-130	77.9
SQF35384.1\|184769_185402_-	Xaa-Pro dipeptidase	A0A1X9I5T8	Streptococcus_phage	4.2e-63	54.3
SQF35386.1\|185456_186782_+	helicase conserved C-terminal domain protein	A0A1X9I5S6	Streptococcus_phage	6.3e-117	51.3
SQF35388.1\|186753_187419_+	comF operon protein C ComFC	NA	NA	NA	NA
SQF35391.1\|187498_188047_+	ribosome-associated factor Y	NA	NA	NA	NA
194852:194867	attL	NA	NA	NA	NA
SQF35394.1\|195019_195406_-\|transposase	transposase	A0A1X9I619	Streptococcus_phage	2.1e-25	56.7
SQF35396.1\|195775_196309_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQF35398.1\|196388_197165_-	recX family protein	NA	NA	NA	NA
SQF35400.1\|197312_197705_-\|integrase	phage integrase	A0A1S5SEH2	Streptococcus_phage	1.9e-13	48.6
SQF35402.1\|197728_198397_-\|integrase	phage integrase	C5J953	Streptococcus_phage	8.8e-51	47.2
SQF35405.1\|198570_199257_-	phage protein	A0A1P8VVT3	Streptococcus_phage	4.8e-121	99.1
SQF35407.1\|199427_199580_-	phage protein	A0A1P8VVQ0	Streptococcus_phage	5.2e-20	100.0
SQF35409.1\|199590_199968_-	cI-like repressor	A0A1P8VVK5	Streptococcus_phage	4.0e-69	100.0
SQF35411.1\|199951_200311_-	Transcriptional regulator, MerR family	A0A1P8VVN3	Streptococcus_phage	1.8e-58	98.3
SQF35414.1\|200499_200718_+	Transcriptional regulator, Cro family	A0A1P8VVR5	Streptococcus_phage	4.1e-34	100.0
SQF35416.1\|200812_201064_+	phage protein	A0A1P8VVV6	Streptococcus_phage	1.4e-41	98.8
SQF35418.1\|201094_201232_+	phage protein	A0A1P8VVR9	Streptococcus_phage	9.2e-16	91.1
SQF35420.1\|201247_201562_+	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	7.0e-51	96.2
SQF35423.1\|201709_202192_+	phage protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
SQF35425.1\|202192_202873_+	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQF35427.1\|202974_204204_+	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	2.8e-236	99.5
SQF35429.1\|204218_204677_+	phage protein	A0A1P8VVN0	Streptococcus_phage	5.0e-82	99.3
SQF35431.1\|204688_205492_+	phage protein	A0A1P8VVM6	Streptococcus_phage	4.3e-153	98.9
SQF35434.1\|205481_206963_+	DNA primase	A0A1P8VVM0	Streptococcus_phage	4.2e-295	99.4
SQF35436.1\|207167_208031_+\|transposase	transposase	NA	NA	NA	NA
SQF35438.1\|208176_208497_+	phage protein	A0A1P8VVL5	Streptococcus_phage	5.8e-53	99.1
SQF35440.1\|208480_208837_+	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	1.8e-58	95.8
SQF35442.1\|208833_209085_+	phage protein	A0A1P8VVV4	Streptococcus_phage	3.4e-40	92.8
SQF35444.1\|209078_209363_+	phage protein	A0A1P8VVP5	Streptococcus_phage	2.7e-49	97.9
SQF35446.1\|209359_209773_+	phage protein	Q938M1	Temperate_phage	1.2e-34	63.1
SQF35448.1\|209769_209940_+	phage protein	Q938M0	Temperate_phage	2.5e-10	96.8
SQF35450.1\|209936_210221_+	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	5.0e-40	91.5
SQF35452.1\|210223_210559_+	Uncharacterised protein	A0A097PAS4	Streptococcus_pyogenes_phage	4.7e-45	100.0
210268:210283	attR	NA	NA	NA	NA
SQF35454.1\|210724_210910_+	phage protein	A0A097PBF0	Streptococcus_pyogenes_phage	7.0e-27	100.0
SQF35456.1\|211196_211700_+	phage protein	A0A097PAV5	Streptococcus_pyogenes_phage	2.2e-91	98.2
SQF35458.1\|211696_211867_+	phage protein	A0A097PAS8	Streptococcus_pyogenes_phage	2.9e-27	100.0
SQF35460.1\|212151_212586_+	autolysin regulatory protein	J7KDQ1	Streptococcus_phage	2.2e-71	94.4
SQF35463.1\|213195_213576_+	phage protein	A0A097PAR5	Streptococcus_pyogenes_phage	1.0e-64	100.0
SQF35466.1\|213565_214840_+\|terminase	terminase large subunit	A0A097PAV9	Streptococcus_pyogenes_phage	1.1e-251	100.0
SQF35468.1\|214839_216165_+\|portal	portal protein	A0A097PAT2	Streptococcus_pyogenes_phage	7.4e-243	100.0
SQF35470.1\|216133_217042_+	phage protein	A0A097PBF2	Streptococcus_pyogenes_phage	4.2e-88	100.0
SQF35472.1\|217048_217315_+	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	2.6e-38	100.0
SQF35474.1\|217464_218037_+	phage scaffold protein	A0A097PAW3	Streptococcus_pyogenes_phage	1.2e-72	100.0
SQF35476.1\|218054_218945_+	phage protein	A0A097PAW2	Streptococcus_pyogenes_phage	8.6e-86	99.4
SQF35478.1\|218957_219251_+	phage protein	A0A097PBF3	Streptococcus_pyogenes_phage	2.0e-47	100.0
SQF35480.1\|219264_219609_+	phage protein	A0A097PAS2	Streptococcus_pyogenes_phage	1.1e-54	100.0
SQF35482.1\|219605_219917_+	phage protein	A0A097PAW7	Streptococcus_pyogenes_phage	2.6e-50	99.0
SQF35484.1\|219925_220309_+	antigen C	A0A097PAT9	Streptococcus_pyogenes_phage	1.7e-59	100.0
SQF35486.1\|220310_220721_+	antigen B	A0A097PAW5	Streptococcus_pyogenes_phage	1.4e-70	100.0
SQF35488.1\|220732_221239_+	antigen A	A0A097PBF4	Streptococcus_pyogenes_phage	2.6e-79	100.0
SQF35490.1\|221251_221569_+	phage protein	A0A097PAS6	Streptococcus_pyogenes_phage	4.9e-52	100.0
SQF35493.1\|221541_222000_+	phage protein	A0A097PAX1	Streptococcus_pyogenes_phage	8.6e-82	99.3
SQF35495.1\|221992_222361_+	phage protein	A0A097PAU2	Streptococcus_pyogenes_phage	5.4e-18	92.2
SQF35497.1\|222389_223799_+	phage, tape measure protein	A0A097PAU2	Streptococcus_pyogenes_phage	2.1e-219	99.4
SQF35500.1\|223799_225284_+\|tail	siphovirus tail component family protein	A0A097PAW9	Streptococcus_pyogenes_phage	4.3e-292	99.8
SQF35503.1\|225284_228725_+	phage protein	A0A097PBF5	Streptococcus_pyogenes_phage	0.0e+00	99.9
SQF35505.1\|228729_230592_+	phage structural protein	A0A097PAT0	Streptococcus_pyogenes_phage	0.0e+00	99.7
SQF35507.1\|230602_230950_+	phage protein	A0A097PAX5	Streptococcus_pyogenes_phage	3.5e-59	100.0
SQF35510.1\|230963_231086_+	phage protein	A0A097PAU6	Streptococcus_pyogenes_phage	2.4e-15	97.5
SQF35512.1\|231099_231423_+	phage protein	A0A097PAX2	Streptococcus_pyogenes_phage	7.7e-53	100.0
SQF35514.1\|231422_231755_+	N-acetylmuramoyl-L-alanine amidase	A0A097PBF6	Streptococcus_pyogenes_phage	5.7e-51	100.0
SQF35519.1\|231756_232521_+	phage-associated cell wall hydrolase	A0A097PAT3	Streptococcus_pyogenes_phage	1.5e-150	100.0
SQF35521.1\|232532_233135_+	phage protein	A0A097PAX9	Streptococcus_pyogenes_phage	7.8e-91	98.8
SQF35525.1\|233145_233919_+	phage protein	A0A097PAV0	Streptococcus_pyogenes_phage	3.9e-135	100.0
SQF35527.1\|233928_234150_+	phage protein	A0A097PAX7	Streptococcus_pyogenes_phage	2.5e-18	84.5
SQF35529.1\|234149_234809_+	phage protein	A0A097PBF7	Streptococcus_pyogenes_phage	8.5e-123	100.0
SQF35531.1\|234930_235686_-	exotoxin type A	A0A097PAT7	Streptococcus_pyogenes_phage	2.2e-143	100.0
SQF35532.1\|235906_236089_+	paratox	J7KBZ4	Streptococcus_phage	1.1e-19	81.4
SQF35533.1\|236279_237635_+	RNA methyltransferase	A0A2K5B251	Erysipelothrix_phage	4.3e-73	32.7

DBSCAN-SWA_2

368228 : 427704

Bacillus_phage(21.43%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF35785.1\|368228_369257_-\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQF35789.1\|369458_370163_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQF35791.1\|370281_370998_+	16S pseudouridylate synthetase	NA	NA	NA	NA
SQF35795.1\|371292_372255_+	competence CoiA-like family protein	NA	NA	NA	NA
SQF35798.1\|372267_374073_+	oligoendopeptidase F	NA	NA	NA	NA
SQF35802.1\|374448_375645_+	major facilitator superfamily protein	NA	NA	NA	NA
SQF35804.1\|375746_376418_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.9e-08	27.2
SQF35806.1\|376480_377536_+	foldase protein prsA 1	NA	NA	NA	NA
SQF35809.1\|377922_380541_+\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	5.1e-62	34.1
SQF35813.1\|380894_381116_+	XRE family transcriptional regulator	NA	NA	NA	NA
SQF35815.1\|381112_381874_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF35817.1\|381892_382588_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQF35819.1\|382685_383111_-	Transposase	A0A1P8CWQ3	Bacillus_phage	2.5e-27	44.1
SQF35821.1\|383589_383835_-\|transposase	transposase	NA	NA	NA	NA
SQF35823.1\|383930_385244_-	chloride channel protein	NA	NA	NA	NA
SQF35826.1\|385218_386178_-	ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.8e-126	70.2
SQF35828.1\|386381_388541_-	ribonucleotide-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	4.7e-263	63.6
SQF35831.1\|388560_388779_-	glutaredoxin	A0A249XUR7	Enterococcus_phage	1.1e-13	49.3
SQF35834.1\|389171_389435_+	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA
SQF35836.1\|389439_391173_+	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA
SQF35838.1\|391357_392785_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
SQF35840.1\|392878_394024_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
SQF35842.1\|394042_394153_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
SQF35844.1\|394263_395349_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-33	32.3
SQF35846.1\|395446_396073_+	uridine kinase	A0A1V0SAA3	Catovirus	2.2e-35	39.7
SQF35848.1\|396152_396416_+	membrane protein	NA	NA	NA	NA
SQF35851.1\|396468_397278_-	membrane protein	NA	NA	NA	NA
SQF35853.1\|397422_397920_+	GAF domain-containing protein	NA	NA	NA	NA
SQF35855.1\|397919_399590_+	DNA polymerase III subunits gamma and tau	E7DN81	Pneumococcus_phage	6.6e-47	40.6
SQF35862.1\|399852_400794_-	biotin-protein ligase	NA	NA	NA	NA
SQF35864.1\|400997_403376_+	leucine Rich Repeat family protein	NA	NA	NA	NA
SQF35866.1\|403912_405109_+	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	9.9e-138	65.4
SQF35868.1\|405282_406542_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQF35870.1\|406899_407805_+	protein G-related alpha 2M-bindingprotein	NA	NA	NA	NA
SQF35872.1\|408042_408585_+	acetyltransferase family protein	NA	NA	NA	NA
SQF35874.1\|408593_409283_+	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA
SQF35876.1\|409308_409878_+	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA
SQF35878.1\|409892_410753_+	methionine aminopeptidase Map	NA	NA	NA	NA
SQF35880.1\|410754_411720_+	ribonuclease BN-like family protein	NA	NA	NA	NA
SQF35882.1\|411830_413114_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
SQF35884.1\|413106_413598_+	shikimate kinase	NA	NA	NA	NA
SQF35886.1\|413805_415257_+	cell envelope-related function transcriptional attenuator common domain-containing protein	NA	NA	NA	NA
SQF35888.1\|415338_416694_+\|tRNA	tRNA (uracil-5-)-methyltransferase	D0R096	Streptococcus_phage	3.1e-252	98.0
SQF35890.1\|416732_416843_+	phosphorylase Pnp/Udp family protein	NA	NA	NA	NA
SQF35892.1\|417001_417514_+	phosphorylase superfamily protein	F5CA76	Streptococcus_phi-m46.1-like_phage	9.6e-90	95.9
SQF35894.1\|417598_418000_+	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA
SQF35896.1\|418104_419589_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQF35898.1\|419962_421183_+	sugar (and other) transporter family protein	NA	NA	NA	NA
SQF35900.1\|421302_421668_-	thioesterase superfamily protein	NA	NA	NA	NA
SQF35902.1\|421782_422514_+	16S pseudouridylate synthase	NA	NA	NA	NA
SQF35904.1\|422530_422854_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	6.1e-18	46.9
SQF35906.1\|423332_423578_-\|transposase	transposase	NA	NA	NA	NA
SQF35908.1\|423655_424966_-	membrane protein	NA	NA	NA	NA
SQF35910.1\|425189_426062_+	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA
SQF35912.1\|426361_427168_-\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	8.3e-64	50.4
SQF35914.1\|427188_427704_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

443408 : 503764

Streptococcus_phage(43.33%)

transposase,portal,terminase,head,holin,tail,integrase

attL 462328:462387|attR 502652:502729

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF35946.1\|443408_444272_+\|transposase	transposase	NA	NA	NA	NA
SQF35948.1\|444508_444652_+	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA
SQF35951.1\|444663_446202_+	D-alanine--poly(phosphoribitol) ligase subunit 1	A0A2K9KZV5	Tupanvirus	3.5e-42	28.1
SQF35953.1\|446198_447455_+	Protein dltB	NA	NA	NA	NA
SQF35955.1\|447472_447712_+	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA
SQF35957.1\|447704_448955_+	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA
SQF35960.1\|448985_449969_+	alpha/beta fold family hydrolase	NA	NA	NA	NA
SQF35962.1\|450482_450866_-\|transposase	transposase	Q9MBM9	Staphylococcus_prophage	5.1e-19	40.5
SQF35964.1\|450862_451069_-\|transposase	truncated transposase	NA	NA	NA	NA
SQF35967.1\|451442_452279_-	maltose transport system permease	NA	NA	NA	NA
SQF35968.1\|452278_453640_-	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA
SQF35970.1\|453913_455161_-	maltose/maltodextrin-binding protein	NA	NA	NA	NA
SQF35972.1\|455270_456134_+\|transposase	transposase	NA	NA	NA	NA
SQF35974.1\|456373_457390_+	LacI family transcription regulator	C6ZCU4	Enterobacteria_phage	3.7e-16	27.5
SQF35976.1\|457504_458998_+	4-alpha-glucanotransferase	NA	NA	NA	NA
SQF35978.1\|459032_461297_+	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
SQF35980.1\|461553_462174_-	phage protein	NA	NA	NA	NA
462328:462387	attL	NA	NA	NA	NA
SQF35982.1\|462447_463536_-\|integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	4.2e-204	99.4
SQF35984.1\|463785_464595_-	phage protein	J7KDP1	Streptococcus_phage	3.8e-24	35.8
SQF35986.1\|464607_465444_-	phage transcriptional repressor	A0A097PBE5	Streptococcus_pyogenes_phage	1.8e-125	88.0
SQF35988.1\|465602_465704_+	Uncharacterised protein	NA	NA	NA	NA
SQF35990.1\|465799_465958_+	Uncharacterised protein	J7KH24	Streptococcus_phage	3.4e-22	92.3
SQF35992.1\|465993_466128_+	Uncharacterised protein	X2KTZ3	Streptococcus_phage	3.4e-07	79.5
SQF35994.1\|466085_466769_-	phage protein	A0A1X9I5M7	Streptococcus_phage	1.2e-71	59.4
SQF35996.1\|466866_467067_+	helix-turn-helix family protein	A0A141E205	Streptococcus_phage	2.7e-08	59.6
SQF35997.1\|467176_467386_-	Uncharacterised protein	NA	NA	NA	NA
SQF35999.1\|467572_467779_+	Uncharacterised protein	NA	NA	NA	NA
SQF36000.1\|467798_467930_+	Uncharacterised protein	NA	NA	NA	NA
SQF36001.1\|467915_468134_-	Uncharacterised protein	NA	NA	NA	NA
SQF36002.1\|468277_468463_+	phage protein	J7KH19	Streptococcus_phage	4.6e-18	68.9
SQF36003.1\|468540_468837_+	phage protein	A0A097PAT8	Streptococcus_pyogenes_phage	2.3e-43	84.7
SQF36004.1\|468833_468968_+	phage protein	A0A1P8VVR9	Streptococcus_phage	9.6e-18	95.5
SQF36005.1\|468983_469298_+	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	5.9e-50	94.2
SQF36006.1\|469311_470214_+	DNA replication protein dnaD	J7KBV5	Streptococcus_phage	3.0e-118	87.5
SQF36007.1\|470306_471065_+	phage DNA replication protein	A0A1S5S7L9	Streptococcus_phage	1.3e-47	42.4
SQF36008.1\|471064_471202_+	phage protein	J7KBQ4	Streptococcus_phage	3.5e-07	75.7
SQF36009.1\|471212_471569_+	phage protein	A0A097PAU3	Streptococcus_pyogenes_phage	3.0e-50	99.2
SQF36010.1\|471549_471804_+	phage protein	Q938N0	Temperate_phage	1.8e-41	97.6
SQF36011.1\|471824_472307_+	phage protein	Q938M9	Temperate_phage	1.6e-49	98.8
SQF36012.1\|472307_472982_+	Single-stranded DNA-binding protein	Q938M8	Temperate_phage	2.0e-103	97.3
SQF36013.1\|472974_473394_+	single-stranded DNA-binding protein ssb	Q938M7	Temperate_phage	3.1e-70	97.1
SQF36015.1\|473602_474043_+	phage protein	A0A097PAS0	Streptococcus_pyogenes_phage	4.5e-80	97.9
SQF36016.1\|474039_474396_+	phage protein	A0A1P8VVP9	Streptococcus_phage	2.1e-59	97.5
SQF36017.1\|474392_474638_+	phage protein	A0A097PBE9	Streptococcus_pyogenes_phage	4.8e-39	93.8
SQF36018.1\|474637_474925_+	phage protein	J7KDH9	Streptococcus_phage	5.1e-32	75.0
SQF36020.1\|474908_475322_+	phage protein	Q938M1	Temperate_phage	4.6e-34	62.4
SQF36021.1\|475318_475489_+	phage protein	Q938M0	Temperate_phage	8.5e-11	100.0
SQF36022.1\|475485_475770_+	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	2.6e-36	86.2
SQF36023.1\|475774_475975_+	Uncharacterised protein	A0A0E3T873	Gordonia_phage	4.6e-08	45.3
SQF36024.1\|475987_476389_+	Uncharacterised protein	NA	NA	NA	NA
SQF36025.1\|476388_477024_+	phage protein	L0P368	Streptococcus_phage	5.5e-87	67.9
SQF36026.1\|477294_477735_+	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	7.2e-78	97.3
SQF36028.1\|478303_478735_+\|terminase	phage terminase small subunit	A0A1S5SCD2	Streptococcus_phage	1.8e-49	72.6
SQF36029.1\|478712_480020_+\|terminase	terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	5.9e-184	75.2
SQF36030.1\|480031_481534_+\|portal	phage portal protein, SPP1 family	C9W9H5	Streptococcus_virus	4.1e-141	54.3
SQF36031.1\|481514_483140_+\|head	phage head morphogenesis, SPP1 gp7 family domain protein	U6E9F1	Streptococcus_phage	1.1e-46	43.8
SQF36032.1\|483130_483310_+	Uncharacterised protein	NA	NA	NA	NA
SQF36034.1\|483369_483636_+	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.7e-34	84.1
SQF36035.1\|483770_484304_+	phage protein	A0A141E0S7	Streptococcus_phage	1.4e-14	83.9
SQF36036.1\|484313_484694_+	structural protein	A0A0K2CNR0	Brevibacillus_phage	5.8e-07	37.1
SQF36037.1\|484693_485770_+\|head	phage head protein	A0A2H4J022	uncultured_Caudovirales_phage	5.5e-103	56.0
SQF36039.1\|485779_486022_+	phage protein	NA	NA	NA	NA
SQF36040.1\|486035_486389_+	phage protein	A0A2H4J002	uncultured_Caudovirales_phage	9.7e-25	49.6
SQF36041.1\|486385_486694_+	phage protein	A0A2P1JTW8	Anoxybacillus_phage	5.7e-13	40.2
SQF36042.1\|486674_487040_+	phage protein	A0A097BY98	Enterococcus_phage	7.7e-17	46.3
SQF36044.1\|487036_487426_+	phage protein	Q38611	Lactococcus_phage	3.5e-44	68.2
SQF36045.1\|487435_488083_+\|tail	phage major tail protein	D7RWD5	Brochothrix_phage	1.4e-40	52.0
SQF36046.1\|488135_488495_+	phage protein	D7RWD6	Brochothrix_phage	4.3e-20	44.5
SQF36047.1\|488536_488866_+	phage protein	A0A1P8BLR3	Lactococcus_phage	2.0e-11	41.5
SQF36048.1\|488880_492147_+	tape measure domain protein	U6E979	Streptococcus_phage	1.6e-04	30.4
SQF36050.1\|492178_492958_+\|tail	phage tail protein	A3F655	Streptococcus_phage	1.9e-68	55.5
SQF36051.1\|492954_495006_+	phage protein	A3F656	Streptococcus_phage	0.0e+00	84.6
SQF36052.1\|495002_496010_+	phage hyaluronidase	A7J2A8	Streptococcus_phage	1.4e-137	71.7
SQF36054.1\|496022_497933_+	phage infection protein	Q938J9	Temperate_phage	1.3e-120	67.8
SQF36055.1\|497946_498108_+	phage protein	NA	NA	NA	NA
SQF36056.1\|498110_498728_+	phage protein	Q938J7	Temperate_phage	2.7e-78	89.3
SQF36057.1\|498737_499013_+\|holin	phage holin	A7J2B2	Streptococcus_phage	2.6e-41	100.0
SQF36058.1\|499009_499237_+	phage protein	A7J2B3	Streptococcus_phage	2.0e-31	100.0
SQF36060.1\|499245_499356_+	phage membrane protein	A7J2B4	Streptococcus_phage	3.0e-09	94.4
SQF36061.1\|499352_500558_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	1.7e-206	84.3
SQF36062.1\|500627_501062_-	phage membrane protein	NA	NA	NA	NA
SQF36063.1\|501332_502133_-	streptodornase	NA	NA	NA	NA
SQF36064.1\|502370_502559_+	paratox	A3F673	Streptococcus_phage	1.3e-20	83.1
SQF36066.1\|503149_503764_+	membrane protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
502652:502729	attR	NA	NA	NA	NA

DBSCAN-SWA_4

718239 : 772576

Streptococcus_phage(80.39%)

portal,terminase,protease,tail,integrase

attL 729558:729606|attR 769804:769852

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF36450.1\|718239_718566_-\|protease	protease	NA	NA	NA	NA
SQF36451.1\|718595_719381_-	acetyl esterase	NA	NA	NA	NA
SQF36453.1\|719513_721175_-	Zn-dependent hydrolase	NA	NA	NA	NA
SQF36454.1\|721378_722137_-	spermidine/putrescine import ATP-binding protein potA	W5SAS9	Pithovirus	1.0e-10	28.5
SQF36456.1\|722133_723003_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SQF36458.1\|723178_723343_-	Uncharacterised protein	NA	NA	NA	NA
SQF36460.1\|723347_724346_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQF36462.1\|724699_726352_+	fibronectin-binding protein	A0A1J0F9J4	Only_Syngen_Nebraska_virus	1.7e-07	41.0
SQF36464.1\|726410_727658_-	Tetratricopeptide repeat family protein	NA	NA	NA	NA
SQF36466.1\|727647_728829_-	permease	NA	NA	NA	NA
SQF36468.1\|728886_729363_-	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA
729558:729606	attL	NA	NA	NA	NA
SQF36470.1\|729966_730677_-	exotoxin H precursor	NA	NA	NA	NA
SQF36471.1\|730702_731482_-	exotoxin I precursor	A0A075M4C7	Staphylococcus_phage	4.6e-27	32.3
SQF36473.1\|731646_732399_-	phage-associated cell wall hydrolase	A3F665	Streptococcus_phage	1.0e-140	96.8
SQF36474.1\|732400_732733_-	N-acetylmuramoyl-L-alanine amidase	A3F664	Streptococcus_phage	2.8e-50	98.2
SQF36476.1\|732745_733066_-	Uncharacterised protein	A3F663	Streptococcus_phage	1.2e-50	99.1
SQF36478.1\|733076_733688_-	phage protein	Q938J7	Temperate_phage	8.8e-82	91.1
SQF36479.1\|733690_733852_-	phage protein	NA	NA	NA	NA
SQF36481.1\|733860_735879_-	Phage infection protein	Q938J9	Temperate_phage	3.9e-126	58.8
SQF36483.1\|735888_736998_-	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.3e-120	71.3
SQF36485.1\|736997_738980_-	phage protein	A7J2A7	Streptococcus_phage	0.0e+00	93.9
SQF36486.1\|738989_739832_-	phage protein	A7J2A6	Streptococcus_phage	3.9e-157	97.5
SQF36488.1\|739843_744226_-\|tail	phage minor tail protein	A7J2A5	Streptococcus_phage	1.3e-224	74.0
SQF36490.1\|744240_744474_-	phage protein	A7J2A4	Streptococcus_phage	6.4e-33	97.4
SQF36492.1\|744548_745004_-	phage protein	A7J2A3	Streptococcus_phage	1.2e-75	98.7
SQF36494.1\|745057_745657_-\|tail	phage major tail protein	A7J2A2	Streptococcus_phage	1.7e-90	97.1
SQF36497.1\|745668_746028_-	phage protein	A7J2A1	Streptococcus_phage	1.2e-57	98.3
SQF36499.1\|746031_746376_-	phage protein	A7J2A0	Streptococcus_phage	5.1e-55	98.2
SQF36500.1\|746372_746651_-	phage protein	A7J299	Streptococcus_phage	1.9e-47	100.0
SQF36502.1\|746661_747018_-	phage protein	A7J298	Streptococcus_phage	4.6e-59	100.0
SQF36504.1\|747029_747917_-	phage protein	A7J297	Streptococcus_phage	2.1e-161	100.0
SQF36506.1\|747929_748499_-	phage protein	A7J296	Streptococcus_phage	1.9e-83	100.0
SQF36508.1\|748666_748933_-	putative phage associated protein	Q938K9	Temperate_phage	2.9e-37	96.6
SQF36510.1\|748937_749054_-	phage membrane protein	A7J294	Streptococcus_phage	2.0e-08	100.0
SQF36512.1\|749153_750602_-	phage protein	A7J293	Streptococcus_phage	1.2e-278	99.8
SQF36514.1\|750561_752094_-\|portal	phage portal protein	A7J292	Streptococcus_phage	4.5e-292	99.8
SQF36516.1\|752109_753387_-\|terminase	terminase large subunit	A7J291	Streptococcus_phage	3.1e-246	99.8
SQF36518.1\|753376_753829_-\|terminase	phage terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
SQF36520.1\|753918_754335_-	phage protein	A7J289	Streptococcus_phage	3.3e-72	99.3
SQF36522.1\|754318_754465_-	Uncharacterised protein	NA	NA	NA	NA
SQF36523.1\|754467_754740_-	phage membrane protein	A7J287	Streptococcus_phage	5.7e-25	73.3
SQF36524.1\|754732_754903_-	phage protein	A7J285	Streptococcus_phage	9.0e-21	92.3
SQF36525.1\|754903_756226_-	SNF2 family phage protein	A7J284	Streptococcus_phage	5.1e-252	97.7
SQF36526.1\|756222_756498_-	phage protein	A7J283	Streptococcus_phage	7.7e-46	97.8
SQF36527.1\|756883_759268_-	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	4.8e-277	94.8
SQF36528.1\|759272_761195_-	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	99.1
SQF36529.1\|761237_761795_-	phage protein	D2J040	Enterococcus_phage	3.3e-51	58.5
SQF36531.1\|761809_762967_-	phage protein	A7J278	Streptococcus_phage	8.8e-216	97.9
SQF36533.1\|762966_763266_-	phage protein	A7J277	Streptococcus_phage	1.8e-43	100.0
SQF36535.1\|763354_763558_-	phage protein	A7J276	Streptococcus_phage	1.6e-32	98.5
SQF36537.1\|763554_763905_-	phage protein	NA	NA	NA	NA
SQF36539.1\|763914_764052_-	phage protein	NA	NA	NA	NA
SQF36541.1\|764048_764435_-	phage protein	A7J274	Streptococcus_phage	3.3e-58	89.0
SQF36543.1\|764431_764635_-	phage protein	NA	NA	NA	NA
SQF36544.1\|764627_764798_-	phage protein	A7J273	Streptococcus_phage	1.2e-20	89.3
SQF36546.1\|764799_765111_-	excisionase	A0A1S5SA25	Streptococcus_phage	8.2e-44	80.4
SQF36548.1\|765188_765374_-	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQF36549.1\|765540_765780_+	phage protein	NA	NA	NA	NA
SQF36551.1\|765921_766728_+	protein Ymh	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
SQF36553.1\|766662_766929_-	phage protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
SQF36555.1\|766939_767155_-	phage protein	M1Q1B4	Streptococcus_phage	1.2e-25	79.7
SQF36557.1\|767462_767813_+	DNA-binding phage protein	C5J980	Streptococcus_phage	1.1e-33	62.6
SQF36559.1\|767815_768202_+	phage protein	M1PFJ2	Streptococcus_phage	3.3e-34	55.5
SQF36561.1\|768213_768480_+	phage protein	NA	NA	NA	NA
SQF36563.1\|768607_769747_+\|integrase	phage integrase	A1EAB7	Streptococcus_phage	1.2e-119	56.3
SQF36564.1\|769829_770870_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-68	43.9
769804:769852	attR	NA	NA	NA	NA
SQF36565.1\|771113_771707_-	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
SQF36566.1\|771706_772576_-	glucose-1-phosphate thymidyl transferase	K7QKA7	Escherichia_phage	2.4e-101	64.6

DBSCAN-SWA_5

783254 : 839768

Bacillus_virus(21.43%)

transposase,protease,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF36606.1\|783254_784154_-\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQF36608.1\|784287_784464_+	putative uncharacterized protein ORF 3	NA	NA	NA	NA
SQF36610.1\|784581_785505_-	exfoliative toxin	NA	NA	NA	NA
SQF36612.1\|785742_786162_-	glutathione S-transferase	NA	NA	NA	NA
SQF36614.1\|786472_787459_-	Rhodanese domain protein UPF0176, Firmicutes subgroup	NA	NA	NA	NA
SQF36616.1\|787659_787962_+	Uncharacterised protein	NA	NA	NA	NA
SQF36617.1\|788508_789714_-	30S ribosomal protein S1	NA	NA	NA	NA
SQF36619.1\|790104_790335_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQF36621.1\|790398_791421_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQF36623.1\|791543_793967_-	topoisomerase IV subunit	G3M9Z5	Bacillus_virus	1.5e-95	32.9
SQF36625.1\|794199_795018_-	phosphate ABC transporter ATPase	NA	NA	NA	NA
SQF36627.1\|795084_797034_-	topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.9e-122	42.0
SQF36629.1\|797168_797810_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQF36631.1\|797867_799136_-	dihydroorotase	NA	NA	NA	NA
SQF36633.1\|799293_799947_-	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	3.1e-40	40.5
SQF36635.1\|800178_801180_+\|transposase	transposase	H7BW61	unidentified_phage	2.1e-32	35.0
SQF36637.1\|801165_801816_-	amino-acid ABC transporter permease yckA	NA	NA	NA	NA
SQF36638.1\|801844_802708_-	cystine-binding protein	NA	NA	NA	NA
SQF36640.1\|802825_804280_-	amidase	NA	NA	NA	NA
SQF36642.1\|804476_805106_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
SQF36644.1\|805163_805856_-	orotidine 5'-phosphate decarboxylase	NA	NA	NA	NA
SQF36646.1\|806131_806668_-	Uncharacterised protein	NA	NA	NA	NA
SQF36648.1\|806940_807795_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQF36650.1\|807873_808662_-	LytR family transcriptional regulator	NA	NA	NA	NA
SQF36652.1\|808654_809368_-	Purine nucleoside phosphorylase	NA	NA	NA	NA
SQF36654.1\|810030_810840_-	purine nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	1.5e-52	41.9
SQF36656.1\|810823_811264_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.9e-34	53.8
SQF36658.1\|811282_812494_-	phosphopentomutase	NA	NA	NA	NA
SQF36660.1\|812570_813254_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
SQF36662.1\|813631_815731_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	4.3e-120	39.2
SQF36664.1\|815788_816532_-	virulence factor relevant regulator	NA	NA	NA	NA
SQF36666.1\|816679_817279_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
SQF36668.1\|817288_818518_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-135	60.0
SQF36670.1\|818647_818818_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQF36672.1\|818837_819335_-	dihydrofolate reductase	W5QU76	Bacillus_phage	1.1e-10	34.4
SQF36674.1\|819414_820254_-	thymidylate synthase	U5J9N5	Bacillus_phage	1.7e-83	53.2
SQF36676.1\|820474_821650_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQF36678.1\|821636_822914_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQF36680.1\|823143_824133_-	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQF36682.1\|824119_825133_-	phosphomevalonate kinase	NA	NA	NA	NA
SQF36684.1\|825125_826070_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQF36686.1\|826051_826930_-	mevalonate kinase	NA	NA	NA	NA
SQF36688.1\|827223_828456_-	two component system histidine kinase	NA	NA	NA	NA
SQF36690.1\|828464_829133_-	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQF36692.1\|829135_829732_-	GTP pyrophosphokinase	NA	NA	NA	NA
SQF36693.1\|830005_830572_+	5'-nucleotidase	NA	NA	NA	NA
SQF36695.1\|830622_832017_+	5'-nucleotidase	NA	NA	NA	NA
SQF36697.1\|832097_832508_-	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQF36699.1\|833399_835277_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	8.7e-64	31.5
SQF36701.1\|835273_836482_-\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	5.3e-38	45.0
SQF36703.1\|836606_837455_-	degV family protein	NA	NA	NA	NA
SQF36705.1\|837454_837835_-\|transposase	transposase	NA	NA	NA	NA
SQF36706.1\|838062_838239_-	nucleoside diphosphate kinase	NA	NA	NA	NA
SQF36708.1\|838742_839768_+\|protease	igG-degrading protease	NA	NA	NA	NA

DBSCAN-SWA_6

878869 : 889472

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF36756.1\|878869_880012_-	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	8.3e-25	27.3
SQF36757.1\|880246_880687_+	membrane protein	NA	NA	NA	NA
SQF36758.1\|880716_881985_+	folylpolyglutamate synthase	NA	NA	NA	NA
SQF36759.1\|882072_883425_-	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-31	24.2
SQF36760.1\|883645_883987_-	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	40.2
SQF36761.1\|884047_885214_-	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
SQF36762.1\|885307_885994_-	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQF36763.1\|885990_887154_-	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQF36764.1\|887261_889472_+	phosphoglycerol transferase	W6LM83	Streptococcus_phage	8.5e-268	68.9

DBSCAN-SWA_7

924882 : 975605

Streptococcus_phage(30.0%)

transposase,protease,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF36797.1\|924882_927288_-\|tRNA	phenylalanyl-tRNA synthetase subunit beta	NA	NA	NA	NA
SQF36798.1\|927497_928541_-\|tRNA	phenylalanyl-tRNA synthetase alpha subunit	A0A2K9L3A8	Tupanvirus	4.6e-30	34.3
SQF36799.1\|928823_929363_-	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA
SQF36800.1\|929398_929587_-	epuA protein	NA	NA	NA	NA
SQF36801.1\|929590_930862_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQF36802.1\|930926_931184_-	membrane protein	NA	NA	NA	NA
SQF36803.1\|931449_931866_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
SQF36804.1\|931878_933285_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
SQF36805.1\|933446_934322_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
SQF36806.1\|934337_935846_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
SQF36807.1\|935861_936398_-	ATP synthase delta chain	NA	NA	NA	NA
SQF36808.1\|936397_936892_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
SQF36809.1\|936909_937626_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
SQF36810.1\|937660_937858_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
SQF36811.1\|938249_939272_-	lipid kinase	A0A1V0SBJ0	Catovirus	3.6e-19	27.9
SQF36812.1\|939285_941244_-	NAD-dependent DNA ligase	A0A0K2QQN8	Ralstonia_phage	9.9e-103	34.9
SQF36813.1\|942215_944948_-	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA
SQF36814.1\|945519_946638_-	ABC transporter	NA	NA	NA	NA
SQF36815.1\|946634_947762_-	ABC transporter	NA	NA	NA	NA
SQF36816.1\|947770_948694_-	ABC transporter family protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.7e-33	38.1
SQF36817.1\|948716_949400_-	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA
SQF36818.1\|949396_950068_-\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQF36819.1\|950042_951401_-\|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	NA	NA	NA	NA
SQF36820.1\|951420_952479_-\|bacteriocin	bacteriocin biosynthesis cyclodehydratase	NA	NA	NA	NA
SQF36821.1\|952475_953426_-	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA
SQF36822.1\|953647_953809_-\|bacteriocin	bacteriocin protoxin, streptolysin S family protein	NA	NA	NA	NA
SQF36823.1\|954579_955887_-	Enolase	A0A1X9I5Z8	Streptococcus_phage	1.2e-240	96.6
SQF36824.1\|956119_956578_+	hypothetical cytosolic protein	W6LLD2	Streptococcus_phage	1.8e-18	39.1
SQF36825.1\|956709_958434_-	septation ring formation regulator	NA	NA	NA	NA
SQF36826.1\|958801_960754_-	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	8.9e-144	46.2
SQF36827.1\|960754_961324_-	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA
SQF36828.1\|962338_962686_-	50S ribosomal protein L19	NA	NA	NA	NA
SQF36829.1\|962800_964063_-	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.2e-93	50.3
SQF36830.1\|964055_964340_-	chorismate mutase	NA	NA	NA	NA
SQF36831.1\|964514_964964_-	flavodoxin	NA	NA	NA	NA
SQF36832.1\|965357_966299_+	DHH family protein	NA	NA	NA	NA
SQF36833.1\|966413_966674_+	50S ribosomal protein L31	NA	NA	NA	NA
SQF36834.1\|966770_967970_-	tagatose-6-phosphate ketose/aldose isomerase	NA	NA	NA	NA
SQF36835.1\|967989_968712_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQF36836.1\|968862_970410_-	high-affinity zinc uptake system protein	NA	NA	NA	NA
SQF36837.1\|970560_971979_-	dipeptidase	NA	NA	NA	NA
SQF36838.1\|972811_973465_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	4.0e-24	33.0
SQF36839.1\|973685_973907_-	hupothetical protein	NA	NA	NA	NA
SQF36840.1\|973911_975045_-\|transposase	transposase	NA	NA	NA	NA
SQF36841.1\|975221_975605_-\|transposase	transposase	Q9MBM9	Staphylococcus_prophage	3.9e-19	39.7

DBSCAN-SWA_8

1091368 : 1123151

Tupanvirus(14.29%)

transposase,protease,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF36956.1\|1091368_1093312_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	1.4e-120	38.7
SQF36957.1\|1093733_1095068_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
SQF36958.1\|1095069_1096068_-	glycosyltransferase	NA	NA	NA	NA
SQF36959.1\|1096198_1097200_-	Catabolite control protein A	C6ZCU4	Enterobacteria_phage	8.9e-23	28.2
SQF36960.1\|1097373_1098459_+	Xaa-Pro dipeptidase	NA	NA	NA	NA
SQF36961.1\|1098507_1099173_+	NAD(P)H nitroreductase yfkO	NA	NA	NA	NA
SQF36962.1\|1099183_1099561_+	bleomycin resistance protein	NA	NA	NA	NA
SQF36963.1\|1099705_1100632_+	glucosyl transferase family 2	V5USA4	Oenococcus_phage	4.4e-77	47.2
SQF36964.1\|1100842_1101526_+	membrane protein	NA	NA	NA	NA
SQF36965.1\|1101525_1102452_+	membrane protein	NA	NA	NA	NA
SQF36966.1\|1102501_1103149_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
SQF36967.1\|1103264_1103984_-	glutamine cyclotransferase	NA	NA	NA	NA
SQF36968.1\|1103989_1104457_-	ssrA-binding protein	W5RAM5	Staphylococcus_phage	7.5e-41	57.0
SQF36969.1\|1104459_1106790_-	ribonuclease R	Q0GXV6	Lactococcus_phage	5.2e-90	39.6
SQF36970.1\|1106886_1107123_-	preprotein translocase subunit	NA	NA	NA	NA
SQF36971.1\|1107311_1108505_-	major facilitator superfamily protein	NA	NA	NA	NA
SQF36972.1\|1108626_1110129_-	ATPase	A0A248XCZ8	Klebsiella_phage	4.4e-74	41.6
SQF36973.1\|1110318_1110912_-	dephospho-CoA kinase	NA	NA	NA	NA
SQF36974.1\|1110908_1111736_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	2.3e-16	27.5
SQF36975.1\|1111907_1112774_-	transcriptional regulator	NA	NA	NA	NA
SQF36976.1\|1113271_1113451_+	SLH, S-layer homology domain W	NA	NA	NA	NA
SQF36977.1\|1113845_1114115_+	Uncharacterised protein	NA	NA	NA	NA
SQF36978.1\|1114462_1114861_-	histidine kinase	NA	NA	NA	NA
SQF36979.1\|1114953_1116021_-	Uncharacterised protein	NA	NA	NA	NA
SQF36980.1\|1116274_1116676_-	Uncharacterised protein	NA	NA	NA	NA
SQF36981.1\|1116854_1117151_-	Uncharacterised protein	NA	NA	NA	NA
SQF36982.1\|1117689_1117890_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQF36983.1\|1117902_1118130_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
SQF36984.1\|1118447_1118870_+\|transposase	transposase, Mutator family protein	NA	NA	NA	NA
SQF36985.1\|1118866_1119016_+\|transposase	IS1191 transposase	NA	NA	NA	NA
SQF36986.1\|1119353_1119536_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF36987.1\|1119550_1119796_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF36988.1\|1120193_1120448_+	Uncharacterised protein	NA	NA	NA	NA
SQF36989.1\|1120753_1121230_-	phosphohydrolase	NA	NA	NA	NA
SQF36990.1\|1121249_1122146_-	GTP-binding protein Era	NA	NA	NA	NA
SQF36991.1\|1122265_1122673_-	diacylglycerol kinase	NA	NA	NA	NA
SQF36992.1\|1122653_1123151_-\|protease	metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_9

1169003 : 1175035

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF37035.1\|1169003_1169831_+	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	5.8e-129	79.3
SQF37036.1\|1169904_1170261_-	arsenate reductase	M1PLC0	Streptococcus_phage	1.8e-39	65.0
SQF37037.1\|1170558_1171188_+	copper homeostasis protein	NA	NA	NA	NA
SQF37038.1\|1171234_1171627_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQF37039.1\|1171653_1172517_-	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	1.9e-114	74.3
SQF37040.1\|1172521_1172845_-	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQF37041.1\|1173248_1173488_-	Tpl protein	NA	NA	NA	NA
SQF37042.1\|1173506_1174382_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.6e-68	46.6
SQF37043.1\|1174399_1175035_-	thymidylate kinase	M1PSC7	Streptococcus_phage	2.0e-65	63.4

DBSCAN-SWA_10

1535714 : 1546832

Synechococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF37385.1\|1535714_1536839_+	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQF37386.1\|1536934_1537798_+\|transposase	transposase	NA	NA	NA	NA
SQF37387.1\|1537867_1539415_-	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	3.4e-45	51.3
SQF37388.1\|1539598_1540153_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.6e-24	35.0
SQF37389.1\|1540320_1541343_-	phosphoribosylaminoimidazole synthetase	A0A0E3FGG1	Synechococcus_phage	1.4e-63	42.0
SQF37390.1\|1541370_1542825_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
SQF37391.1\|1543058_1546832_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.0e-39	27.4

DBSCAN-SWA_11

1604222 : 1668373

Streptococcus_phage(16.67%)

transposase,protease,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF37428.1\|1604222_1605566_-\|tRNA	cysteinyl-tRNA synthetase	A0A1V0SAQ2	Catovirus	8.5e-53	30.1
SQF37429.1\|1605593_1605824_-	Uncharacterised protein	NA	NA	NA	NA
SQF37430.1\|1606302_1606884_-	serine acetyl transferase	NA	NA	NA	NA
SQF37431.1\|1606892_1607645_-	polynucleotide phosphorylase/polyadenylase	NA	NA	NA	NA
SQF37432.1\|1610049_1610778_-	translaldolase	H8ZNI7	Synechococcus_phage	8.4e-15	33.0
SQF37433.1\|1610790_1612170_-	PTS system ascorbate-specific transporter subunit IIC	NA	NA	NA	NA
SQF37434.1\|1612196_1612481_-	PTS system transporter subunit IIB	NA	NA	NA	NA
SQF37435.1\|1612473_1614534_-	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA
SQF37436.1\|1614885_1615155_-	30S ribosomal protein S15	NA	NA	NA	NA
SQF37437.1\|1615330_1615531_-	Uncharacterised protein	NA	NA	NA	NA
SQF37438.1\|1616039_1616654_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.3e-13	38.9
SQF37439.1\|1616687_1617230_-	oxidoreductase	NA	NA	NA	NA
SQF37440.1\|1617359_1617788_-	MarR family transcriptional regulator	NA	NA	NA	NA
SQF37441.1\|1617897_1622295_-	DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	1.7e-17	40.8
SQF37442.1\|1622548_1624405_-\|tRNA	prolyl-tRNA synthetase	A0A2K9L297	Tupanvirus	4.1e-05	24.6
SQF37443.1\|1624602_1625862_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
SQF37444.1\|1625934_1626729_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
SQF37445.1\|1626741_1627491_-	undecaprenyl pyrophosphate synthase	R9W0U9	Flavobacterium_phage	9.6e-22	41.7
SQF37446.1\|1627719_1627941_-	preprotein translocase subunit YajC	NA	NA	NA	NA
SQF37447.1\|1628200_1628548_-\|bacteriocin	bacteriocin transporter	NA	NA	NA	NA
SQF37448.1\|1628689_1632187_-	pullulanase	NA	NA	NA	NA
SQF37449.1\|1632576_1634184_-	glucan 1,6-alpha-glucosidase	NA	NA	NA	NA
SQF37450.1\|1634312_1635446_-	Multiple sugar-binding transport ATP-binding protein msmK	G3M9Y6	Bacillus_virus	4.8e-25	32.9
SQF37451.1\|1635743_1636592_-	leucine rich protein	NA	NA	NA	NA
SQF37452.1\|1636951_1638274_+	streptokinase C	NA	NA	NA	NA
SQF37453.1\|1638371_1638815_-\|tRNA	D-tyrosyl-tRNA deacylase	NA	NA	NA	NA
SQF37454.1\|1638829_1641049_-	GTP pyrophosphokinase	A0A1S6L1R3	Vibrio_phage	1.5e-06	36.9
SQF37455.1\|1641300_1641576_-	collagen-like protein	NA	NA	NA	NA
SQF37456.1\|1641726_1642146_-	collagen-like protein	NA	NA	NA	NA
SQF37457.1\|1642546_1643680_+\|transposase	transposase	NA	NA	NA	NA
SQF37458.1\|1643684_1643819_+	hupothetical protein	NA	NA	NA	NA
SQF37459.1\|1643853_1644336_+	nrdI Flavodoxin like family protein	NA	NA	NA	NA
SQF37460.1\|1644730_1645408_-	putative RgfB protein	NA	NA	NA	NA
SQF37461.1\|1645776_1647534_+	para-aminobenzoate synthetase componentI/4-amino-4-deoxychorismate lyase	A0A0B5J984	Pandoravirus	1.2e-38	30.1
SQF37462.1\|1647566_1648133_+	anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.5e-32	42.4
SQF37463.1\|1648165_1649434_+	Chromosome segregation helicase	A0A127AWE7	Bacillus_phage	4.5e-96	46.9
SQF37464.1\|1649932_1650373_+	acetyltransferase	NA	NA	NA	NA
SQF37465.1\|1650427_1650898_+	topology modulation protein	A0A097BYE2	Leuconostoc_phage	2.1e-27	42.3
SQF37466.1\|1651182_1651884_+	mitogenic exotoxin Z	A0EX09	Staphylococcus_phage	7.3e-16	36.2
SQF37467.1\|1652210_1652435_-	putative cytoplasmic protein	NA	NA	NA	NA
SQF37468.1\|1652613_1654242_+	Glutathione-binding protein gsiB	NA	NA	NA	NA
SQF37469.1\|1654354_1655332_+	oligopeptide ABC transporter (permease)	NA	NA	NA	NA
SQF37470.1\|1655328_1656150_+	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	NA	NA	NA	NA
SQF37471.1\|1656161_1656965_+	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	W6JKT0	Anomala_cuprea_entomopoxvirus	6.5e-08	23.9
SQF37472.1\|1656948_1657575_+	Dipeptide transport ATP-binding protein dppF	A0A2H4P6Z4	Pseudomonas_phage	1.0e-05	26.1
SQF37473.1\|1657657_1657858_-	CsbD-like protein	J7KJ36	Streptococcus_phage	1.3e-21	86.4
SQF37474.1\|1658026_1660498_-	histidine triad protein	NA	NA	NA	NA
SQF37475.1\|1660510_1661431_-	Laminin-binding surface protein	NA	NA	NA	NA
SQF37476.1\|1661608_1662742_-\|transposase	transposase	NA	NA	NA	NA
SQF37477.1\|1662992_1666496_-	C5A peptidase	NA	NA	NA	NA
SQF37478.1\|1666929_1667589_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.9e-114	91.3
SQF37479.1\|1667566_1668373_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	3.9e-130	91.6

DBSCAN-SWA_12

1762711 : 1778430

Streptococcus_phage(61.54%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF37560.1\|1762711_1763503_-	transcriptional regulator	A0A1S5SE31	Streptococcus_phage	7.5e-09	48.5
SQF37561.1\|1763594_1763828_+	transcriptional regulator	NA	NA	NA	NA
SQF37562.1\|1763882_1764290_+	phage protein	A0A1X9I5V7	Streptococcus_phage	1.3e-49	69.4
SQF37563.1\|1764303_1764921_+	pRha family phage regulatory protein	A0A159B6D5	Gordonia_phage	2.2e-11	38.8
SQF37564.1\|1765154_1765496_+	phage protein	NA	NA	NA	NA
SQF37565.1\|1765482_1765704_+	Uncharacterised protein	NA	NA	NA	NA
SQF37566.1\|1765706_1765898_+	phage protein	NA	NA	NA	NA
SQF37567.1\|1765909_1766239_+	phage protein	NA	NA	NA	NA
SQF37568.1\|1766241_1766514_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
SQF37569.1\|1766514_1767372_+	replication protein	A0A1X9I6L2	Streptococcus_phage	4.5e-124	74.8
SQF37570.1\|1767340_1769029_+	phage/plasmid primase, P4 family, C-terminal domain protein	A0A1X9I717	Streptococcus_phage	2.5e-259	82.1
SQF37571.1\|1769315_1769489_+	Uncharacterised protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
SQF37572.1\|1769494_1769668_+	phage protein	NA	NA	NA	NA
SQF37573.1\|1769669_1770179_+	phage protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
SQF37574.1\|1770252_1770741_+	phage protein	A0A1X9I5V2	Streptococcus_phage	1.4e-45	54.9
SQF37575.1\|1771139_1771502_+	phage protein	A0A2H4JFS1	uncultured_Caudovirales_phage	1.3e-05	29.9
SQF37576.1\|1771476_1771860_+	phage protein	Q938L8	Temperate_phage	3.7e-14	41.7
SQF37577.1\|1772060_1772723_+	secreted phage protein	NA	NA	NA	NA
SQF37578.1\|1773119_1775675_-	DNA mismatch repair protein mutS	A0A1V0SGG8	Hokovirus	3.0e-43	23.4
SQF37579.1\|1775661_1775868_-	cytoplasmic protein	NA	NA	NA	NA
SQF37580.1\|1776010_1776448_-	arginine repressor	NA	NA	NA	NA
SQF37581.1\|1776738_1778430_+\|tRNA	arginyl-tRNA synthetase	A0A2I2L3K1	Orpheovirus	7.1e-73	32.2

Anti-CRISPR protein detection

Acr_ID: LS483344.1|SQF35990.1|465799_465958_+|Uncharacterised-protein

Click the colored protein region to show detailed information

Acr_ID: LS483344.1|SQF35992.1|465993_466128_+|Uncharacterised-protein

Click the colored protein region to show detailed information

Acr_ID: LS483344.1|SQF36003.1|468540_468837_+|phage-protein

Click the colored protein region to show detailed information

Acr_ID: LS483344.1|SQF36004.1|468833_468968_+|phage-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

LS483344.1|SQF35990.1|465799_465958_+|Uncharacterised-protein

465799_465958_+

52 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.5087719298245614	0.9655172413793104

443408-503764

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483344_1	TypeI	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	497038-497071	2
LS483344_1	TypeI	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	497039-497071	2

1. spacer 1.2|279295|34|LS483344|PILER-CR matches to LS483344 position: 497038-497071, mismatch: 2

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

2. spacer 1.8|279296|33|LS483344|CRT matches to LS483344 position: 497039-497071, mismatch: 2

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

LS483344.1|SQF35992.1|465993_466128_+|Uncharacterised-protein

465993_466128_+

44 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.5087719298245614	0.9655172413793104

443408-503764

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483344_1	TypeI	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	497038-497071	2
LS483344_1	TypeI	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	497039-497071	2

1. spacer 1.2|279295|34|LS483344|PILER-CR matches to LS483344 position: 497038-497071, mismatch: 2

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

2. spacer 1.8|279296|33|LS483344|CRT matches to LS483344 position: 497039-497071, mismatch: 2

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

LS483344.1|SQF36003.1|468540_468837_+|phage-protein

468540_468837_+

98 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.46551724137931033	1.0

443408-503764

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483344_1	TypeI	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	497038-497071	2
LS483344_1	TypeI	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	497039-497071	2

1. spacer 1.2|279295|34|LS483344|PILER-CR matches to LS483344 position: 497038-497071, mismatch: 2

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

2. spacer 1.8|279296|33|LS483344|CRT matches to LS483344 position: 497039-497071, mismatch: 2

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

LS483344.1|SQF36004.1|468833_468968_+|phage-protein

468833_468968_+

44 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.46551724137931033	1.0

443408-503764

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483344_1	TypeI	1.2\|279295\|34\|LS483344\|PILER-CR	279295-279328	34	497038-497071	2
LS483344_1	TypeI	1.8\|279296\|33\|LS483344\|CRT	279296-279328	33	497039-497071	2

1. spacer 1.2|279295|34|LS483344|PILER-CR matches to LS483344 position: 497038-497071, mismatch: 2

agtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
agtccctcttgcggcaatctggcgacagtatcat	Protospacer
*********** **********.***********

2. spacer 1.8|279296|33|LS483344|CRT matches to LS483344 position: 497039-497071, mismatch: 2

gtccctcttgaggcaatctggtgacagtatcat	CRISPR spacer
gtccctcttgcggcaatctggcgacagtatcat	Protospacer
********** **********.***********

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483344

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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