CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483356	Streptococcus pyogenes strain NCTC8230 genome assembly, chromosome: 1	1 crisprs	DinG,csm6,cas3,DEDDh,csa3	0	0	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483356_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483356_2

1042483-1042584

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483356_2

>merge|LS483356|2|1042483-1042584|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>LS483356|2|2|1042483-1042584|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
LS483356.1\|SQF60462.1\|1035099_1036335_+\|cation-diffusion-facilitator-transporter-family-protein	unknown	unknown	gnl\|CDD\|223131
LS483356.1\|SQF60482.1\|1043382_1044885_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LS483356.1\|SQF60492.1\|1050414_1051200_+\|ABC-transporter-permease-protein	unknown	unknown	unknown
LS483356.1\|SQF60484.1\|1044947_1045961_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
LS483356.1\|SQF60478.1\|1040617_1042432_-\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LS483356.1\|SQF60490.1\|1049706_1050405_+\|ABC-transporter-family-protein	unknown	unknown	gnl\|CDD\|224054
LS483356.1\|SQF60458.1\|1032154_1033165_-\|transposase	unknown	unknown	gnl\|CDD\|225382
LS483356.1\|SQF60460.1\|1033657_1034980_+\|amino-acid-symporter	unknown	unknown	gnl\|CDD\|224040
LS483356.1\|SQF60495.1\|1052535_1052724_-\|phage-protein	unknown	unknown	gnl\|CDD\|269889
LS483356.1\|SQF60497.1\|1052838_1053627_-\|exotoxin-M-precursor	unknown	unknown	gnl\|CDD\|280949
LS483356.1\|SQF60486.1\|1046040_1049151_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LS483356.1\|SQF60476.1\|1040086_1040422_-\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|225380
LS483356.1\|SQF60493.1\|1051330_1051945_-\|membrane-protein	unknown	unknown	gnl\|CDD\|223475
LS483356.1\|SQF60480.1\|1042607_1043165_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LS483356.1\|SQF60488.1\|1049335_1049707_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LS483356.1\|SQF60470.1\|1039338_1039980_-\|histidine-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LS483356.1\|SQF60464.1\|1036704_1037478_-\|protein-B	unknown	unknown	gnl\|CDD\|369335
LS483356.1\|SQF60466.1\|1037847_1038684_-\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483356.1\|SQF60468.1\|1038699_1039329_-\|histidine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483356.1\|SQF60456.1\|1029724_1032043_-\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429

Protein	Function_ID	Function_description	E-value
LS483356.1\|SQF60462.1\|1035099_1036335_+\|cation-diffusion-facilitator-transporter-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	4.75704e-95
LS483356.1\|SQF60482.1\|1043382_1044885_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LS483356.1\|SQF60484.1\|1044947_1045961_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
LS483356.1\|SQF60478.1\|1040617_1042432_-\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LS483356.1\|SQF60490.1\|1049706_1050405_+\|ABC-transporter-family-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
LS483356.1\|SQF60458.1\|1032154_1033165_-\|transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	2.10125e-103
LS483356.1\|SQF60460.1\|1033657_1034980_+\|amino-acid-symporter	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LS483356.1\|SQF60495.1\|1052535_1052724_-\|phage-protein	gnl\|CDD\|269889	cd06603, GH31_GANC_GANAB_alpha, neutral alpha-glucosidase C, neutral alpha-glucosidase AB. This subgroup includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.	0.00788697
LS483356.1\|SQF60497.1\|1052838_1053627_-\|exotoxin-M-precursor	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	3.5341e-08
LS483356.1\|SQF60486.1\|1046040_1049151_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LS483356.1\|SQF60476.1\|1040086_1040422_-\|phosphonoacetate-hydrolase	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	1.37463e-64
LS483356.1\|SQF60493.1\|1051330_1051945_-\|membrane-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
LS483356.1\|SQF60480.1\|1042607_1043165_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
LS483356.1\|SQF60488.1\|1049335_1049707_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
LS483356.1\|SQF60470.1\|1039338_1039980_-\|histidine-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.36474e-71
LS483356.1\|SQF60464.1\|1036704_1037478_-\|protein-B	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	3.19117e-97
LS483356.1\|SQF60466.1\|1037847_1038684_-\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.79673e-109
LS483356.1\|SQF60468.1\|1038699_1039329_-\|histidine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.38566e-110
LS483356.1\|SQF60456.1\|1029724_1032043_-\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0

>LS483356.1|SQF60478.1|1040617_1042432_-|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LS483356.1|SQF60476.1|1040086_1040422_-|phosphonoacetate-hydrolase
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVFDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LS483356.1|SQF60470.1|1039338_1039980_-|histidine-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKVPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LS483356.1|SQF60468.1|1038699_1039329_-|histidine-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHSQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LS483356.1|SQF60466.1|1037847_1038684_-|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQNKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LS483356.1|SQF60464.1|1036704_1037478_-|protein-B
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>LS483356.1|SQF60462.1|1035099_1036335_+|cation-diffusion-facilitator-transporter-family-protein
MTQDPIANLKLARKGPIVSIIVYLLLSAAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMILEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLVDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHHTHYRIVKM
>LS483356.1|SQF60460.1|1033657_1034980_+|amino-acid-symporter
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNESVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LS483356.1|SQF60458.1|1032154_1033165_-|transposase
MQDYYTPKGKQLTIHERRQIQRWKLEGRSNREIARLLGKAPQTIHNEIKRGLVRQQVRKGKFEAVYSAQHAQLVYQENRKRSVRPIRQRKQDREAIEHYMRQNYSPEMIVKAKGVQVPVSTIYYWIHHGKLSLGKEAMLYPRKAKQARKHASPYFKPAGKSIEQRPDSINQRLEAGHYEIDTVILTRAKNQCLLTLTDRKTRHQLIRLIPDKSAQAVNKALTGILKDYTVNSITADNGTEFSRLSDVFPASDIYYAHPYASWERGTNENHNRLIRRCLPKGTKTTTPKEVAAIEHWINHYPKRLFNYKSPVEMLKLANFNLKFGEIAIIFKYLILN
>LS483356.1|SQF60456.1|1029724_1032043_-|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALSLNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNTQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANSLGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LS483356.1|SQF60480.1|1042607_1043165_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LS483356.1|SQF60482.1|1043382_1044885_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LS483356.1|SQF60484.1|1044947_1045961_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LS483356.1|SQF60486.1|1046040_1049151_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDAKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LS483356.1|SQF60488.1|1049335_1049707_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LS483356.1|SQF60490.1|1049706_1050405_+|ABC-transporter-family-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LS483356.1|SQF60492.1|1050414_1051200_+|ABC-transporter-permease-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LS483356.1|SQF60493.1|1051330_1051945_-|membrane-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LS483356.1|SQF60495.1|1052535_1052724_-|phage-protein
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK
>LS483356.1|SQF60497.1|1052838_1053627_-|exotoxin-M-precursor
MRIFLHQNCRLVNMSTTFFIVVLSLMVFSVRMVSAEGTINIKDIYSPRWDVDKTLSPTTLREIYNRDTIKKVNKPITGKRGTQVIMDAQHKTKVWEFDDYNFIISSNLHPSVEGKFNVGDNVDVFGLALSAEVFSKDQIHSINGGLVKVNERKGAGKTIYMNVFIDGHKKDDTSKYKITFEKSPVTFQEVDVRLRKSFMLNDEIKLYQYDSKVLSGNWEFHGSGEKEEGADLFKYPDYRYNNLIDIDKKSHIDVYLFTNKEN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

38795 : 50035

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF58418.1\|38795_41447_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.4e-27	27.3
SQF58419.1\|41607_43062_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	33.3
SQF58420.1\|43089_44112_+	phosphoribosylaminoimidazole synthetase	A0A0E3FGG1	Synechococcus_phage	6.9e-63	41.4
SQF58421.1\|44279_44834_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
SQF58422.1\|45017_46565_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	9.8e-45	52.4
SQF58423.1\|46623_47748_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQF58424.1\|47910_49266_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQF58425.1\|49543_50035_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	3.2e-18	42.3

DBSCAN-SWA_2

186764 : 232611

Streptococcus_phage(55.56%)

integrase,holin,tRNA,tail,terminase,protease,portal,capsid,transposase

attL 188035:188052|attR 232608:232625

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF58554.1\|186764_187898_+\|transposase	transposase	NA	NA	NA	NA
SQF58556.1\|187902_188130_+	exfoliative toxin	NA	NA	NA	NA
188035:188052	attL	NA	NA	NA	NA
SQF58557.1\|188067_188931_-	membrane protein	NA	NA	NA	NA
SQF58564.1\|189149_190292_+\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.9e-86	43.9
SQF58566.1\|190509_190821_+	helper of Tim protein 13	NA	NA	NA	NA
SQF58568.1\|190824_191364_+	biotin transporter	NA	NA	NA	NA
SQF58570.1\|191503_192283_+	metal-dependent hydrolase	NA	NA	NA	NA
SQF58572.1\|192282_192798_+\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
SQF58573.1\|193411_194632_-	S-layer protein	NA	NA	NA	NA
SQF58575.1\|195019_196162_-\|integrase	integrase	A0A141E0H2	Streptococcus_phage	6.4e-118	56.7
SQF58577.1\|196288_196822_-	putative lipoprotein	A0A1S5SAH9	Streptococcus_phage	1.3e-20	55.3
SQF58578.1\|196833_197214_-	phage protein	Q938N7	Temperate_phage	1.4e-40	64.0
SQF58579.1\|197223_197574_-	phage transcriptional regulator, Cro/CI family	A0A1S5SFC6	Streptococcus_phage	4.8e-32	60.3
SQF58581.1\|197884_198100_+	phage protein	M1Q1B4	Streptococcus_phage	2.2e-24	78.6
SQF58582.1\|198173_198308_+	Uncharacterised protein	A3F616	Streptococcus_phage	2.1e-17	100.0
SQF58584.1\|198304_199048_+	phage associated antirepressor	A3F617	Streptococcus_phage	1.5e-120	86.1
SQF58586.1\|199123_199336_+	Uncharacterised protein	NA	NA	NA	NA
SQF58589.1\|199369_199561_+	Uncharacterised protein	NA	NA	NA	NA
SQF58591.1\|199592_199748_+	Uncharacterised protein	NA	NA	NA	NA
SQF58593.1\|199749_200292_-	Uncharacterised protein	NA	NA	NA	NA
SQF58595.1\|200422_200683_+	Uncharacterised protein	A0A1S5SAL2	Streptococcus_phage	1.1e-28	73.3
SQF58598.1\|200701_200890_+	Uncharacterised protein	NA	NA	NA	NA
SQF58599.1\|200876_202223_+	DNA polymerase III delta prime subunit	A0A1P8VVQ6	Streptococcus_phage	9.3e-209	84.9
SQF58601.1\|202209_202812_+	Uncharacterised protein	A0A1P8VVT8	Streptococcus_phage	1.7e-106	93.0
SQF58605.1\|202789_203536_+	DNA replication protein, putative	A0A1P8VVR3	Streptococcus_phage	2.2e-135	96.8
SQF58607.1\|203536_204361_+	phage DNA replication protein	A0A1P8VVV9	Streptococcus_phage	1.4e-127	79.6
SQF58609.1\|204360_204588_+	phage protein	C5J991	Streptococcus_phage	7.1e-13	50.7
SQF58612.1\|204577_204778_+	Uncharacterised protein	NA	NA	NA	NA
SQF58615.1\|204774_205059_+	phage protein	A0A097PAV1	Streptococcus_pyogenes_phage	5.9e-41	93.6
SQF58617.1\|205055_205700_+	modification methylase	A0A140HLV8	Bacillus_phage	2.1e-65	65.1
SQF58619.1\|205687_205843_+	DNA methylase	A0A1S5SFL7	Streptococcus_phage	1.6e-08	60.5
SQF58621.1\|206048_206288_+	DNA methylase	A0A1X9I6Y5	Streptococcus_phage	8.0e-15	61.5
SQF58622.1\|206277_206751_+	gp29	A3F631	Streptococcus_phage	8.0e-91	98.7
SQF58625.1\|206869_207202_+	gp24	A0A1S5SCX1	Streptococcus_phage	1.2e-32	57.4
SQF58628.1\|207194_207524_+	cro/CI family prophage LambdaSa2	A0A1P8VVV5	Streptococcus_phage	3.2e-22	45.5
SQF58631.1\|207520_207694_+	Uncharacterised protein	A0A1J0MGB9	Staphylococcus_phage	1.1e-05	46.9
SQF58632.1\|207696_207945_+	Uncharacterised protein	NA	NA	NA	NA
SQF58637.1\|207941_208121_+	Uncharacterised protein	A0A060QN65	Streptococcus_phage	1.1e-05	55.3
SQF58639.1\|208129_208279_+	Uncharacterised protein	NA	NA	NA	NA
SQF58642.1\|208247_208448_+	Uncharacterised protein	NA	NA	NA	NA
SQF58644.1\|208471_208891_+	RNA polymerase ECF family sigma factor	A0A1S5SF97	Streptococcus_phage	1.1e-19	42.0
SQF58650.1\|208982_209549_+\|integrase	prophage LambdaSa2, site-specific recombinase phage integrase family protein	A0A1S5SCL7	Streptococcus_phage	1.2e-61	61.0
SQF58652.1\|209720_210014_+	Uncharacterised protein	NA	NA	NA	NA
SQF58654.1\|210010_210340_+	HNH endonuclease	A0A1S7FZ53	Listeria_phage	6.7e-20	49.5
SQF58656.1\|210461_210809_+	Uncharacterised protein	E2ELI1	Clostridium_phage	4.0e-07	34.5
SQF58659.1\|210789_212448_+\|terminase	putative phage terminase, large subunit	E2ELI2	Clostridium_phage	4.0e-129	44.4
SQF58661.1\|212646_213882_+\|portal	HK97 family phage portal protein	A0A1S7FYX7	Listeria_phage	3.6e-74	37.6
SQF58663.1\|213885_214602_+\|protease	Prophage Clp protease-like protein	D2XR17	Bacillus_phage	1.4e-38	42.9
SQF58669.1\|214637_215831_+\|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	A0A1B1P752	Bacillus_phage	1.7e-41	30.8
SQF58672.1\|215845_216133_+	HeH/LEM domain	NA	NA	NA	NA
SQF58673.1\|216152_216446_+	Uncharacterised protein	NA	NA	NA	NA
SQF58675.1\|216447_216825_+	Uncharacterised protein	NA	NA	NA	NA
SQF58677.1\|216796_217168_+	Uncharacterised protein	NA	NA	NA	NA
SQF58679.1\|217176_217599_+	Uncharacterised protein	A0A1S7FZ20	Listeria_phage	3.1e-25	48.5
SQF58681.1\|217609_218197_+	Uncharacterised protein	A0A1B1P778	Bacillus_phage	1.1e-28	36.4
SQF58683.1\|218217_218589_+	Uncharacterised protein	NA	NA	NA	NA
SQF58685.1\|218624_218783_+	Uncharacterised protein	NA	NA	NA	NA
SQF58687.1\|218856_222258_+\|tail	tail protein	J7KDT4	Streptococcus_phage	9.5e-93	58.8
SQF58689.1\|222257_222965_+	phage protein	A0A1B1P761	Bacillus_phage	1.3e-28	35.2
SQF58690.1\|222961_225010_+	Phage endopeptidase	Q938K1	Temperate_phage	2.2e-121	44.0
SQF58692.1\|225009_226026_+	phage hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.2e-157	86.7
SQF58694.1\|226041_228057_+	Phage infection protein	Q938J9	Temperate_phage	3.6e-180	74.1
SQF58696.1\|228068_228500_+	phage protein	Q938J8	Temperate_phage	4.0e-73	99.3
SQF58699.1\|228502_229120_+	phage protein	Q938J7	Temperate_phage	8.3e-80	89.8
SQF58701.1\|229129_229585_+\|holin	holin	A0A0M4R3G6	Streptococcus_phage	8.9e-63	80.8
SQF58704.1\|229586_229700_+	phage membrane protein	A7J2B4	Streptococcus_phage	2.6e-08	91.4
SQF58706.1\|229696_230902_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	3.1e-208	84.5
SQF58708.1\|231017_232190_-	DNA/RNA non-specific endonuclease family protein	A7J2B8	Streptococcus_phage	1.4e-75	49.5
SQF58710.1\|232428_232611_+	phage protein	A3F673	Streptococcus_phage	1.1e-19	80.0
232608:232625	attR	NA	NA	NA	NA

DBSCAN-SWA_3

375898 : 431104

Streptococcus_phage(33.33%)

bacteriocin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF59095.1\|375898_376489_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.6e-54	55.7
SQF59096.1\|376983_377259_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF59097.1\|377507_378143_+	thymidylate kinase	M1PSC7	Streptococcus_phage	1.2e-65	63.4
SQF59098.1\|378160_379036_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	4.1e-72	47.9
SQF59099.1\|379054_379294_+	Tpl protein	NA	NA	NA	NA
SQF59100.1\|379697_380021_+	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQF59101.1\|380025_380889_+	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	1.7e-115	75.0
SQF59102.1\|380915_381308_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF59103.1\|381354_381984_-	copper homeostasis protein	NA	NA	NA	NA
SQF59104.1\|382281_382638_+	arsenate reductase	M1PLC0	Streptococcus_phage	1.1e-39	65.8
SQF59105.1\|382711_383539_-	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	3.2e-127	79.1
SQF59106.1\|383772_384954_+	L-lactate oxidase	NA	NA	NA	NA
SQF59107.1\|385219_390163_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA
SQF59108.1\|390935_391643_+	permease	NA	NA	NA	NA
SQF59109.1\|391885_393883_+\|tRNA	methionyl-tRNA synthetase	A0A1V0SHR2	Klosneuvirus	6.0e-87	35.2
SQF59110.1\|394376_395390_+	ribonucleotide-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	1.6e-96	53.0
SQF59111.1\|395393_395882_+	nrdI protein	R4JF54	Bacillus_phage	1.3e-11	37.5
SQF59112.1\|395848_398029_+	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	7.3e-171	43.2
SQF59113.1\|398231_398984_-	ADP-ribosyltransferase	NA	NA	NA	NA
SQF59114.1\|399441_399792_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF59115.1\|400206_400458_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF59116.1\|400551_400824_-	phage protein	NA	NA	NA	NA
SQF59117.1\|400820_401075_-	Uncharacterised protein	NA	NA	NA	NA
SQF59118.1\|401436_401673_+	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA
SQF59119.1\|401665_402364_+	3-ketoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	7.1e-11	25.6
SQF59120.1\|402439_403399_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
SQF59121.1\|403731_405069_+	phosphoglycerate transporter protein	NA	NA	NA	NA
SQF59122.1\|405242_406625_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A2K9L4K9	Tupanvirus	6.5e-32	36.0
SQF59123.1\|406658_407213_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA
SQF59124.1\|407212_407464_+	membrane protein	NA	NA	NA	NA
SQF59125.1\|407483_408179_+	MTA/SAH nucleosidase	NA	NA	NA	NA
SQF59126.1\|408329_408671_+	Uncharacterised protein	NA	NA	NA	NA
SQF59130.1\|408769_409417_-	metalloregulator ScaR	NA	NA	NA	NA
SQF59132.1\|409562_410495_+	manganese-binding protein	NA	NA	NA	NA
SQF59134.1\|410558_411284_+	manganese transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.4e-17	32.6
SQF59136.1\|411284_412139_+	ABC 3 transport family protein	NA	NA	NA	NA
SQF59138.1\|412285_413092_-	cyclophilin type peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
SQF59140.1\|413308_415714_+	cell division protein FtsK	S5VNE3	Mycobacterium_phage	2.2e-88	51.4
SQF59142.1\|415783_416137_-	integral membrane protein	NA	NA	NA	NA
SQF59144.1\|416380_416806_+	50S ribosomal protein L11	NA	NA	NA	NA
SQF59146.1\|416911_417601_+	50S ribosomal protein L1	NA	NA	NA	NA
SQF59148.1\|417922_418651_+	uridylate kinase	NA	NA	NA	NA
SQF59149.1\|418679_419237_+	ribosome recycling factor	NA	NA	NA	NA
SQF59151.1\|419345_420203_+	s1 RNA binding domain	NA	NA	NA	NA
SQF59153.1\|420275_420785_+	methionine sulfoxide reductase A	NA	NA	NA	NA
SQF59155.1\|420781_420997_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF59157.1\|421152_422334_+	lysM domain protein	A0A0E3XB61	Gordonia_phage	2.1e-15	39.6
SQF59159.1\|422648_424421_+	myosin-cross-reactive antigen	NA	NA	NA	NA
SQF59160.1\|424579_425632_+	phosphate starvation-induced protein	W8D063	Erwinia_phage	1.2e-46	50.0
SQF59162.1\|425677_426253_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA
SQF59163.1\|426411_426909_+\|protease	metalloprotease	NA	NA	NA	NA
SQF59165.1\|426889_427297_+	diacylglycerol kinase	NA	NA	NA	NA
SQF59166.1\|427416_428313_+	GTP-binding protein Era	NA	NA	NA	NA
SQF59168.1\|428333_428810_+	phosphohydrolase	NA	NA	NA	NA
SQF59170.1\|429116_429371_-	Uncharacterised protein	NA	NA	NA	NA
SQF59178.1\|429768_429903_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF59180.1\|430015_430198_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF59182.1\|430535_430685_-\|transposase	IS1191 transposase	NA	NA	NA	NA
SQF59184.1\|430681_431104_-\|transposase	transposase, Mutator family protein	NA	NA	NA	NA

DBSCAN-SWA_4

488483 : 494885

Streptococcus_phage(66.67%)

portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF59296.1\|488483_488693_-	vanUG2	A0A2K5B263	Erysipelothrix_phage	1.3e-16	61.5
SQF59297.1\|488682_490341_-	ATPase	NA	NA	NA	NA
SQF59299.1\|490331_490556_-	Uncharacterised protein	NA	NA	NA	NA
SQF59301.1\|490555_491197_-	Uncharacterised protein	NA	NA	NA	NA
SQF59303.1\|491239_491398_+	prophage LambdaSa04	M1PSF2	Streptococcus_phage	3.9e-18	86.5
SQF59305.1\|491452_491755_+	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA
SQF59307.1\|491754_492060_+	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA
SQF59309.1\|492078_492351_+	cytoplasmic protein	E4ZFM1	Streptococcus_phage	2.7e-06	47.9
SQF59311.1\|492455_492908_+\|portal	portal protein	E4ZFM3	Streptococcus_phage	1.3e-61	85.6
SQF59312.1\|492973_493282_+	prophage minor structural protein	Q6DMT0	Streptococcus_phage	5.7e-21	64.9
SQF59314.1\|493698_494037_+	huntington interacting protein HYPE	NA	NA	NA	NA
SQF59317.1\|494192_494885_+	asparagine ligase A	M1PB22	Moumouvirus	4.4e-21	34.1

DBSCAN-SWA_5

563960 : 618132

Streptococcus_phage(46.15%)

bacteriocin,protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF59448.1\|563960_566456_+	helicase DinG	A0A1X9I5C8	Streptococcus_phage	1.1e-202	48.3
SQF59450.1\|566392_567373_-\|transposase	transposase	H7BW61	unidentified_phage	2.7e-32	35.0
SQF59452.1\|567882_569076_+	aspartate aminotransferase	NA	NA	NA	NA
SQF59454.1\|569096_570443_+\|tRNA	asparaginyl-tRNA synthetase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8
SQF59456.1\|570856_571747_+	P-loop ATPase protein family protein	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
SQF59458.1\|571743_572721_+	transporter	A1IMD5	Streptococcus_phage	1.2e-138	74.2
SQF59461.1\|572717_573629_+	sporulation Regulator WhiA C terminal domain-containing protein	Q7AWZ3	Streptococcus_phage	1.7e-105	64.7
SQF59463.1\|573761_575159_+	dipeptidase	NA	NA	NA	NA
SQF59465.1\|575310_576858_+	high-affinity zinc uptake system protein	NA	NA	NA	NA
SQF59467.1\|577007_577730_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQF59470.1\|577749_578949_+	tagatose-6-phosphate ketose/aldose isomerase	NA	NA	NA	NA
SQF59472.1\|579045_579306_-	50S ribosomal protein L31	NA	NA	NA	NA
SQF59474.1\|579420_580362_-	DHH family protein	NA	NA	NA	NA
SQF59476.1\|580755_581205_+	flavodoxin	NA	NA	NA	NA
SQF59478.1\|581379_581664_+	chorismate mutase	NA	NA	NA	NA
SQF59480.1\|581656_582919_+	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	3.2e-94	50.5
SQF59482.1\|583033_583381_+	50S ribosomal protein L19	NA	NA	NA	NA
SQF59484.1\|584396_584966_+	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA
SQF59486.1\|584966_586919_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	8.9e-144	46.2
SQF59489.1\|587286_589011_+	septation ring formation regulator	NA	NA	NA	NA
SQF59491.1\|589142_589601_-	hypothetical cytosolic protein	W6LLD2	Streptococcus_phage	2.3e-18	39.1
SQF59492.1\|589827_591135_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	1.2e-240	96.6
SQF59495.1\|591905_592067_+\|bacteriocin	bacteriocin protoxin, streptolysin S family protein	NA	NA	NA	NA
SQF59503.1\|592288_593239_+	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA
SQF59505.1\|593235_594294_+\|bacteriocin	bacteriocin biosynthesis cyclodehydratase	NA	NA	NA	NA
SQF59507.1\|594313_595672_+\|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	NA	NA	NA	NA
SQF59579.1\|595646_596318_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQF59581.1\|596314_596998_+	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA
SQF59583.1\|597020_597944_+	ABC transporter family protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-33	31.4
SQF59585.1\|597952_599080_+	ABC transporter	NA	NA	NA	NA
SQF59587.1\|599076_600195_+	ABC transporter	NA	NA	NA	NA
SQF59589.1\|600766_603499_+	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA
SQF59591.1\|604470_606429_+	NAD-dependent DNA ligase	A0A0K2QQN8	Ralstonia_phage	9.9e-103	34.9
SQF59592.1\|606442_607465_+	lipid kinase	A0A1V0SBJ0	Catovirus	3.6e-19	27.9
SQF59594.1\|607856_608054_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
SQF59596.1\|608088_608805_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
SQF59598.1\|608822_609317_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
SQF59600.1\|609316_609853_+	ATP synthase delta chain	NA	NA	NA	NA
SQF59602.1\|609868_611377_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
SQF59604.1\|611392_612268_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
SQF59606.1\|612429_613836_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
SQF59608.1\|613848_614265_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
SQF59610.1\|614530_614788_+	membrane protein	NA	NA	NA	NA
SQF59612.1\|614852_616124_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQF59614.1\|616127_616316_+	epuA protein	NA	NA	NA	NA
SQF59616.1\|616351_616891_+	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA
SQF59618.1\|616998_618132_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

657559 : 728922

Streptococcus_phage(19.23%)

head,protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF59694.1\|657559_659770_-	phosphoglycerol transferase	W6LM83	Streptococcus_phage	1.3e-268	69.2
SQF59696.1\|659877_661041_+	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQF59700.1\|661037_661724_+	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQF59702.1\|661817_662984_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
SQF59704.1\|663044_663386_+	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.0e-18	39.3
SQF59706.1\|663606_664959_+	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-30	24.0
SQF59708.1\|665046_666315_-	folylpolyglutamate synthase	NA	NA	NA	NA
SQF59710.1\|666344_666785_-	membrane protein	NA	NA	NA	NA
SQF59714.1\|667019_668162_+	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	4.1e-24	27.0
SQF59716.1\|668173_669388_+	thiamine biosynthesis protein thiI	NA	NA	NA	NA
SQF59719.1\|669425_670718_+	metallophosphatase	A0A2H4JC87	uncultured_Caudovirales_phage	2.9e-34	30.8
SQF59722.1\|670841_671825_+\|transposase	transposase	H7BW61	unidentified_phage	2.7e-32	35.0
SQF59725.1\|672016_672331_+	50S ribosomal protein L21	NA	NA	NA	NA
SQF59727.1\|672342_672669_+	hypothetical ribosome-associated protein	NA	NA	NA	NA
SQF59729.1\|672696_672990_+	LSU ribosomal protein L27p	NA	NA	NA	NA
SQF59732.1\|673135_673246_+	Uncharacterised protein	NA	NA	NA	NA
SQF59734.1\|673347_674262_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQF59736.1\|674258_674717_+	signal peptidase II	NA	NA	NA	NA
SQF59738.1\|674706_675597_+	ribosomal large subunit pseudouridine synthase D	A0A2H4UV25	Bodo_saltans_virus	3.6e-07	25.3
SQF59745.1\|675992_676514_+	Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein pyrR	NA	NA	NA	NA
SQF59747.1\|676529_677789_+	uracil permease	Q9KX94	Enterobacteria_phage	2.7e-61	36.2
SQF59750.1\|677798_678785_+	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.2e-25	32.6
SQF59752.1\|678828_679911_+	carbamoyl phosphate synthase small subunit	R4TGJ8	Halovirus	4.7e-62	36.9
SQF59753.1\|680173_683350_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
SQF59757.1\|683556_684828_+	RND family efflux transporter MFP subunit	NA	NA	NA	NA
SQF59761.1\|684827_685538_+	bacitracin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-36	42.5
SQF59763.1\|685549_686770_+	permease family protein	NA	NA	NA	NA
SQF59765.1\|687023_688757_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
SQF59768.1\|688883_689156_+	30S ribosomal protein S16	NA	NA	NA	NA
SQF59770.1\|689165_689405_+	RNA binding protein	NA	NA	NA	NA
SQF59772.1\|690337_693364_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA
SQF59774.1\|693383_693785_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
SQF59776.1\|693964_694840_-	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
SQF59778.1\|694975_695497_+	transcriptional regulator, TetR family	NA	NA	NA	NA
SQF59779.1\|695711_696230_+	16S rRNA-processing protein	NA	NA	NA	NA
SQF59781.1\|696219_696951_+\|tRNA	tRNA (guanine-N(1)-)-methyltransferase	NA	NA	NA	NA
SQF59783.1\|696950_697943_+	thioredoxin reductase	Q9JRK7	Streptococcus_phage	8.2e-29	54.9
SQF59785.1\|698120_699179_+	regulatory protein	NA	NA	NA	NA
SQF59787.1\|699191_700115_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
SQF59789.1\|700415_701084_+	deoR-like helix-turn-helix domain-containing protein	A0A077SK06	Escherichia_phage	2.2e-17	32.7
SQF59793.1\|701080_701992_+	1-phosphofructokinase	NA	NA	NA	NA
SQF59795.1\|701988_703935_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA
SQF59797.1\|704033_704627_+	N-acetylmuramidase	A0A249Y0X5	Enterococcus_phage	2.7e-11	33.8
SQF59799.1\|704778_705486_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	Q332B8	Clostridium_botulinum_C_phage	6.5e-12	36.4
SQF59802.1\|705542_705761_-\|transposase	degenerate transposase	A0A1B1P773	Bacillus_phage	2.7e-09	55.9
SQF59820.1\|706442_707468_-\|protease	igG-degrading protease	NA	NA	NA	NA
SQF59822.1\|707971_708148_+	nucleoside diphosphate kinase	NA	NA	NA	NA
SQF59824.1\|708375_708756_+\|transposase	transposase	NA	NA	NA	NA
SQF59826.1\|708755_709604_+	degV family protein	NA	NA	NA	NA
SQF59828.1\|709728_710937_+\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	6.9e-38	45.0
SQF59830.1\|710933_712811_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.3e-62	31.1
SQF59832.1\|713702_714113_+	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQF59833.1\|714194_716207_-	5'-nucleotidase	NA	NA	NA	NA
SQF59835.1\|716426_717077_+	GTP pyrophosphokinase	NA	NA	NA	NA
SQF59838.1\|717079_717748_+	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQF59840.1\|717756_718989_+	two component system histidine kinase	NA	NA	NA	NA
SQF59842.1\|719292_720171_+	mevalonate kinase	NA	NA	NA	NA
SQF59844.1\|720152_721097_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQF59847.1\|721089_722103_+	phosphomevalonate kinase	NA	NA	NA	NA
SQF59849.1\|722089_723079_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQF59852.1\|723308_724586_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQF59854.1\|724572_725748_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQF59856.1\|725956_726796_+	thymidylate synthase	U5J9N5	Bacillus_phage	1.9e-82	52.9
SQF59858.1\|726875_727373_+	dihydrofolate reductase	W5QU76	Bacillus_phage	1.9e-10	33.6
SQF59860.1\|727392_727563_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF59861.1\|727692_728922_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.9e-137	60.2

DBSCAN-SWA_7

759944 : 815283

Streptococcus_phage(46.3%)

head,integrase,tRNA,tail,terminase,capsid

attL 774247:774297|attR 816381:816431

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF59917.1\|759944_760844_+\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQF59918.1\|760916_762155_+	GTP-binding protein HflX	NA	NA	NA	NA
SQF59920.1\|762147_762783_+	cystathionine beta-lyase	NA	NA	NA	NA
SQF59922.1\|762797_763727_+	ribonuclease Z	NA	NA	NA	NA
SQF59924.1\|763726_764491_+	short chain dehydrogenase	NA	NA	NA	NA
SQF59927.1\|764487_766698_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.1e-70	30.0
SQF59929.1\|766847_767366_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.7e-30	42.9
SQF59931.1\|767446_768130_+	DNA replication protein DnaD	Q938N2	Temperate_phage	2.9e-09	36.8
SQF59933.1\|768126_768783_+	endonuclease III	NA	NA	NA	NA
SQF59935.1\|768854_769541_+	SAM-dependent methyltransferase	NA	NA	NA	NA
SQF59937.1\|769530_770319_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF59939.1\|770358_771465_+	FAD dependent oxidoreductase family protein	NA	NA	NA	NA
SQF59941.1\|771522_772392_+	glucose-1-phosphate thymidyl transferase	K7QKA7	Escherichia_phage	3.2e-101	64.2
SQF59945.1\|772391_772985_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	1.3e-08	29.5
SQF59947.1\|773228_774269_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-68	43.9
774247:774297	attL	NA	NA	NA	NA
SQF59948.1\|774351_775491_-\|integrase	phage integrase	A1EAB7	Streptococcus_phage	1.3e-118	56.1
SQF59950.1\|775610_776468_-	Site-specific DNA methylase	A0A2H4UUI2	Bodo_saltans_virus	8.1e-17	29.7
SQF59952.1\|776506_778171_-	prophage Lp2 protein 4	NA	NA	NA	NA
SQF59954.1\|778172_778556_-	cI-like repressor	A0A1P8VVK5	Streptococcus_phage	1.2e-52	76.0
SQF59956.1\|778539_778881_-	phage repressor protein	J7KJZ4	Streptococcus_phage	1.2e-48	85.8
SQF59958.1\|779078_779291_+	phage family protein	J7KBP9	Streptococcus_phage	9.2e-31	95.7
SQF59961.1\|779318_780038_+	phage antirepressor family protein	M1Q1T4	Streptococcus_phage	1.5e-88	70.7
SQF59963.1\|780041_780392_+	phage protein	NA	NA	NA	NA
SQF59964.1\|780366_780681_-	Uncharacterised protein	NA	NA	NA	NA
SQF59966.1\|781095_781407_+	excisionase	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
SQF59968.1\|781408_781579_+	phage protein	A7J273	Streptococcus_phage	1.2e-20	89.3
SQF59970.1\|781571_781775_+	phage protein	NA	NA	NA	NA
SQF59972.1\|781814_782159_+	phage protein	A7J274	Streptococcus_phage	4.5e-51	88.6
SQF59974.1\|782155_782305_+	phage protein	A7J275	Streptococcus_phage	2.2e-15	90.0
SQF59975.1\|782301_782505_+	phage protein	A7J276	Streptococcus_phage	9.4e-33	100.0
SQF59977.1\|782592_782892_+	phage protein	A7J277	Streptococcus_phage	1.8e-43	100.0
SQF59979.1\|782891_784049_+	phage protein	A7J278	Streptococcus_phage	1.0e-216	98.2
SQF59981.1\|784063_784621_+	phage protein	D2J040	Enterococcus_phage	3.3e-51	58.5
SQF59983.1\|784663_786586_+	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	98.9
SQF59985.1\|786590_788975_+	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	2.8e-285	97.6
SQF59987.1\|789340_789616_+	phage protein	A7J283	Streptococcus_phage	1.3e-45	97.8
SQF59989.1\|789612_790935_+	SNF2 family phage protein	A7J284	Streptococcus_phage	3.0e-252	97.7
SQF59991.1\|790935_791106_+	phage protein	A7J285	Streptococcus_phage	9.0e-21	92.3
SQF59993.1\|791098_791371_+	phage membrane protein	A7J287	Streptococcus_phage	5.7e-25	73.3
SQF59995.1\|791373_791520_+	Uncharacterised protein	NA	NA	NA	NA
SQF59996.1\|791503_791920_+	phage protein	A7J289	Streptococcus_phage	3.3e-72	99.3
SQF59998.1\|792039_792735_+	phage protein	A0A2H4J4R0	uncultured_Caudovirales_phage	3.4e-29	34.5
SQF60000.1\|792736_794023_+\|terminase	phage terminase	A0A1S5SA45	Streptococcus_phage	5.9e-221	85.0
SQF60002.1\|794036_795539_+\|capsid	Minor capsid protein	Q938L2	Temperate_phage	3.8e-280	99.4
SQF60004.1\|795543_797022_+\|capsid	capsid protein	Q938L1	Temperate_phage	9.0e-274	99.6
SQF60006.1\|796993_797233_+	phage protein	Q938L0	Temperate_phage	2.8e-36	100.0
SQF60008.1\|797294_797561_+	putative phage associated protein	Q938K9	Temperate_phage	1.1e-36	95.5
SQF60009.1\|797692_798301_+	phage protein	Q938K8	Temperate_phage	4.0e-95	95.0
SQF60011.1\|798304_799123_+\|head	putative major head protein	Q79S85	Temperate_phage	4.0e-146	100.0
SQF60013.1\|799176_799593_+	phage protein	Q938K7	Temperate_phage	4.3e-56	99.1
SQF60015.1\|799555_799915_+\|capsid	minor capsid protein - phage associated	Q79S86	Temperate_phage	1.0e-58	100.0
SQF60016.1\|799914_800271_+	phage protein	Q79S88	Temperate_phage	4.5e-62	100.0
SQF60018.1\|800267_800666_+\|capsid	minor capsid protein	Q79S87	Temperate_phage	1.3e-70	99.2
SQF60020.1\|800665_801127_+\|tail	tail shaft protein	Q938K6	Temperate_phage	1.4e-60	78.8
SQF60021.1\|801170_801605_+	phage protein	Q938K5	Temperate_phage	5.5e-70	98.6
SQF60023.1\|801608_802190_+	bacteriophage Gp15 family protein	Q938K4	Temperate_phage	1.6e-104	98.4
SQF60026.1\|802179_805440_+	phage protein	Q938K3	Temperate_phage	0.0e+00	99.3
SQF60036.1\|805436_806153_+	phage protein	Q938K2	Temperate_phage	1.2e-135	99.2
SQF60038.1\|806149_808297_+	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	93.2
SQF60040.1\|808296_809415_+	phage hyaluronidase	A7J2A8	Streptococcus_phage	1.5e-135	78.3
SQF60042.1\|809429_811316_+	gp58-like family protein	Q938J9	Temperate_phage	1.9e-215	84.4
SQF60044.1\|811327_811759_+	phage protein	Q938J8	Temperate_phage	1.4e-70	96.5
SQF60045.1\|811761_812373_+	phage protein	Q938J7	Temperate_phage	1.0e-82	92.6
SQF60046.1\|812384_812657_+	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQF60048.1\|812653_812881_+	phage protein	A7J2B3	Streptococcus_phage	2.0e-31	100.0
SQF60050.1\|812889_812997_+	phage membrane protein	A7J2B4	Streptococcus_phage	3.3e-05	88.2
SQF60052.1\|812997_814332_+	Phage lysin, N-acetylmuramoyl-L-alanine amidase	Q5MY96	Streptococcus_phage	5.9e-248	93.2
SQF60054.1\|814503_815283_+	exotoxin I precursor	A0A075M4C7	Staphylococcus_phage	4.6e-27	32.3
816381:816431	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1017924 : 1135450

133

Streptococcus_phage(46.58%)

integrase,tRNA,tail,terminase,portal,protease,transposase

attL 1089135:1089151|attR 1136967:1136983

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF60431.1\|1017924_1018809_-\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
SQF60432.1\|1018924_1020265_-	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA
SQF60433.1\|1020361_1021318_-	membrane protein	NA	NA	NA	NA
SQF60435.1\|1021328_1021925_-	type I restriction-modification system specificty subunit	NA	NA	NA	NA
SQF60436.1\|1022016_1024653_-	permease family protein	NA	NA	NA	NA
SQF60438.1\|1024667_1025369_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.9e-36	37.0
SQF60440.1\|1025486_1026029_+	bacterial regulatory s, tetR family protein	NA	NA	NA	NA
SQF60442.1\|1026171_1026813_-	bacterial regulatory s, gntR family protein	NA	NA	NA	NA
SQF60444.1\|1026975_1027464_-	general stress protein, Gls24 family	NA	NA	NA	NA
SQF60446.1\|1027474_1027675_-	csbD-like family protein	J7KJ36	Streptococcus_phage	1.8e-07	50.0
SQF60448.1\|1027715_1028255_-	response regulator	NA	NA	NA	NA
SQF60450.1\|1028267_1028456_-	membrane protein	NA	NA	NA	NA
SQF60451.1\|1028466_1029054_-	membrane protein	NA	NA	NA	NA
SQF60453.1\|1029114_1029363_-	transglycosylase associated family protein	NA	NA	NA	NA
SQF60456.1\|1029724_1032043_-	DNA helicase II / ATP-dependent DNA helicase PcrA	A7KV33	Bacillus_phage	2.1e-131	41.2
SQF60458.1\|1032154_1033165_-\|transposase	transposase	H7BW61	unidentified_phage	2.1e-32	35.0
SQF60460.1\|1033657_1034980_+	amino acid symporter	NA	NA	NA	NA
SQF60462.1\|1035099_1036335_+	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
SQF60464.1\|1036704_1037478_-	protein B	NA	NA	NA	NA
SQF60466.1\|1037847_1038684_-	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA
SQF60468.1\|1038699_1039329_-	histidine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-27	35.5
SQF60470.1\|1039338_1039980_-	histidine transporter permease	NA	NA	NA	NA
SQF60476.1\|1040086_1040422_-	phosphonoacetate hydrolase	NA	NA	NA	NA
SQF60478.1\|1040617_1042432_-	glucosamine-fructose-6-phosphate aminotransferase	A7IW18	Paramecium_bursaria_Chlorella_virus	1.2e-97	38.7
SQF60480.1\|1042607_1043165_-	signal peptidase I	NA	NA	NA	NA
SQF60482.1\|1043382_1044885_-	pyruvate kinase	NA	NA	NA	NA
SQF60484.1\|1044947_1045961_-	6-phosphofructokinase	NA	NA	NA	NA
SQF60486.1\|1046040_1049151_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.4e-119	29.8
SQF60488.1\|1049335_1049707_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQF60490.1\|1049706_1050405_+	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQF60492.1\|1050414_1051200_+	ABC transporter permease protein	NA	NA	NA	NA
SQF60493.1\|1051330_1051945_-	membrane protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
SQF60495.1\|1052535_1052724_-	phage protein	A3F673	Streptococcus_phage	1.2e-21	84.7
SQF60497.1\|1052838_1053627_-	exotoxin M precursor	Q938J1	Temperate_phage	9.1e-47	41.4
SQF60498.1\|1053908_1054622_-	mitogen	Q938J1	Temperate_phage	9.0e-78	59.5
SQF60501.1\|1054925_1055792_-	phage protein	Q938J2	Temperate_phage	3.7e-134	100.0
SQF60503.1\|1055779_1056304_-	phage protein	Q938J3	Temperate_phage	4.0e-99	100.0
SQF60504.1\|1056443_1057640_-	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	Q938J4	Temperate_phage	1.8e-200	84.2
SQF60506.1\|1057636_1057747_-	phage membrane protein	A7J2B4	Streptococcus_phage	1.8e-09	97.2
SQF60509.1\|1057750_1057936_-	phage protein	Q938J5	Temperate_phage	1.1e-24	96.7
SQF60510.1\|1057932_1058232_-	phage protein	Q938J6	Temperate_phage	6.7e-35	79.2
SQF60512.1\|1058242_1058860_-	phage protein	Q938J7	Temperate_phage	1.5e-81	90.7
SQF60514.1\|1058862_1059294_-	phage protein	Q938J8	Temperate_phage	1.1e-73	100.0
SQF60516.1\|1059305_1061342_-	Phage infection protein	Q938J9	Temperate_phage	9.1e-184	71.4
SQF60518.1\|1061351_1062359_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	7.6e-107	62.3
SQF60520.1\|1062355_1064500_-	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	90.9
SQF60522.1\|1064496_1065204_-	phage protein	Q938K2	Temperate_phage	1.1e-91	69.8
SQF60524.1\|1065203_1069127_-\|tail	phage tail protein	J7KDT4	Streptococcus_phage	5.0e-239	48.6
SQF60526.1\|1069336_1069663_-	phage protein	J7KK85	Streptococcus_phage	8.3e-39	75.0
SQF60529.1\|1069715_1070324_-\|tail	major tail protein	J7KKC8	Streptococcus_phage	6.7e-74	71.9
SQF60531.1\|1070339_1070765_-	phage protein	J7KBZ9	Streptococcus_phage	7.2e-67	84.4
SQF60533.1\|1070761_1071139_-	phage protein	J7KDM3	Streptococcus_phage	1.5e-47	76.0
SQF60534.1\|1071135_1071483_-	phage protein	J7KJ42	Streptococcus_phage	2.6e-46	80.9
SQF60537.1\|1071479_1071782_-	phage protein	J7KC36	Streptococcus_phage	3.0e-43	88.8
SQF60539.1\|1071926_1073111_-	phage protein	J7KJ82	Streptococcus_phage	1.5e-162	76.6
SQF60541.1\|1073135_1073801_-\|protease	phage ClpP protease	M1Q115	Streptococcus_phage	1.9e-90	77.7
SQF60543.1\|1073778_1074999_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	5.8e-186	81.9
SQF60545.1\|1075032_1075257_-	phage protein	Q938K9	Temperate_phage	3.6e-17	61.4
SQF60546.1\|1075249_1075420_-	phage protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
SQF60548.1\|1075416_1077171_-\|terminase	phage terminase, large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.1
SQF60550.1\|1077185_1077653_-\|terminase	phage terminase, small subunit	J7KC46	Streptococcus_phage	3.9e-82	98.7
SQF60552.1\|1077821_1078163_-	Phage endonuclease	J7KH36	Streptococcus_phage	9.6e-54	89.8
SQF60555.1\|1078159_1078300_-	Uncharacterised protein	NA	NA	NA	NA
SQF60556.1\|1078398_1078584_+	phage protein	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
SQF60558.1\|1078635_1079013_+	phage protein	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
SQF60560.1\|1079150_1079612_-	Uncharacterised protein	NA	NA	NA	NA
SQF60562.1\|1079630_1080545_-	phage protein	NA	NA	NA	NA
SQF60564.1\|1081465_1081906_-	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	5.0e-79	100.0
SQF60567.1\|1082178_1082814_-	phage protein	L0P368	Streptococcus_phage	2.5e-87	68.4
SQF60569.1\|1082813_1083215_-	Uncharacterised protein	NA	NA	NA	NA
SQF60571.1\|1083312_1083540_-	phage protein	A3F630	Streptococcus_phage	1.9e-26	76.0
SQF60572.1\|1083543_1084029_-	DNA N-4 cytosine methyltransferase M.NgoMXV	A0A097PAU8	Streptococcus_pyogenes_phage	4.6e-94	98.8
SQF60574.1\|1084032_1084317_-	phage protein	A3F628	Streptococcus_phage	8.6e-40	91.5
SQF60576.1\|1084313_1084727_-	phage protein	Q938M1	Temperate_phage	2.4e-35	63.8
SQF60578.1\|1084723_1085008_-	phage protein	A0A1P8VVP5	Streptococcus_phage	2.7e-49	97.9
SQF60580.1\|1085001_1085253_-	phage protein	A0A1P8VVV4	Streptococcus_phage	1.6e-42	98.8
SQF60582.1\|1085249_1085606_-	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	4.6e-59	96.6
SQF60584.1\|1085589_1085910_-	phage protein	A0A1P8VVL5	Streptococcus_phage	5.5e-51	94.3
SQF60585.1\|1085944_1086319_-	phage protein	A0A2H4JHE6	uncultured_Caudovirales_phage	8.2e-14	51.7
SQF60587.1\|1086569_1088045_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.0e-249	87.1
SQF60589.1\|1088034_1088838_-	phage protein	A0A1P8VVM6	Streptococcus_phage	1.5e-150	97.4
SQF60591.1\|1088849_1089308_-	phage protein	A0A1P8VVN0	Streptococcus_phage	3.8e-82	100.0
1089135:1089151	attL	NA	NA	NA	NA
SQF60593.1\|1089323_1090553_-	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	1.3e-236	99.8
SQF60594.1\|1090654_1091335_-	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQF60596.1\|1091335_1091818_-	phage protein	A0A1P8VVS5	Streptococcus_phage	7.9e-78	98.8
SQF60598.1\|1092046_1092361_-	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	1.2e-50	95.2
SQF60600.1\|1092376_1092514_-	phage protein	A0A1P8VVR9	Streptococcus_phage	5.4e-16	91.1
SQF60601.1\|1092510_1092807_-	phage protein	A0A097PAT8	Streptococcus_pyogenes_phage	1.4e-48	99.0
SQF60604.1\|1092885_1093071_-	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQF60605.1\|1093237_1093477_+	phage protein	NA	NA	NA	NA
SQF60607.1\|1093626_1093836_+	phage protein	NA	NA	NA	NA
SQF60609.1\|1093794_1094040_-	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	1.2e-34	95.1
SQF60611.1\|1094051_1094291_-	Cro/CI family phage transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	3.1e-35	97.5
SQF60613.1\|1094364_1094847_+	Uncharacterised protein	NA	NA	NA	NA
SQF60615.1\|1094843_1094990_-	Uncharacterised protein	NA	NA	NA	NA
SQF60617.1\|1095164_1095953_+	Phage transcriptional repressor	A0A1S5SD15	Streptococcus_phage	2.9e-85	62.6
SQF60618.1\|1095962_1096268_+	phage membrane protein	NA	NA	NA	NA
SQF60619.1\|1096387_1097476_+\|integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	4.7e-203	99.2
SQF60621.1\|1097749_1098370_+	phage protein	NA	NA	NA	NA
SQF60622.1\|1098626_1100891_-	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
SQF60624.1\|1100925_1102419_-	4-alpha-glucanotransferase	NA	NA	NA	NA
SQF60627.1\|1102533_1103553_-	LacI family transcription regulator	C6ZCU4	Enterobacteria_phage	5.7e-17	27.8
SQF60629.1\|1103797_1105045_+	maltose/maltodextrin-binding protein	NA	NA	NA	NA
SQF60630.1\|1105318_1106680_+	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA
SQF60632.1\|1106679_1107516_+	maltose transport system permease	NA	NA	NA	NA
SQF60634.1\|1107889_1108477_+\|transposase	truncated transposase	Q9MBM9	Staphylococcus_prophage	3.5e-27	39.1
SQF60636.1\|1108990_1109974_-	alpha/beta fold family hydrolase	NA	NA	NA	NA
SQF60638.1\|1110004_1111255_-	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA
SQF60640.1\|1111247_1111487_-	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA
SQF60642.1\|1111504_1112761_-	Protein dltB	NA	NA	NA	NA
SQF60644.1\|1112757_1114296_-	D-alanine--poly(phosphoribitol) ligase subunit 1	A0A2K9KZV5	Tupanvirus	5.0e-41	28.2
SQF60646.1\|1114307_1114451_-	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA
SQF60648.1\|1114714_1116706_-	excinuclease ABC subunit B	NA	NA	NA	NA
SQF60650.1\|1116898_1119073_+	glutamine-binding protein/glutamine transpor tsystem permease protein	NA	NA	NA	NA
SQF60652.1\|1119072_1119813_+	glutamine transport ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	1.5e-35	42.1
SQF60654.1\|1119960_1120083_-	Uncharacterised protein	NA	NA	NA	NA
SQF60656.1\|1120107_1121487_-	PTS system cellobiose-specific transporter subunit IIC	NA	NA	NA	NA
SQF60657.1\|1121677_1122112_-	Domain of uncharacterised function (DUF3284)	NA	NA	NA	NA
SQF60659.1\|1122108_1122444_-	PTS system cellobiose-specific transporter subunit IIA	NA	NA	NA	NA
SQF60662.1\|1122446_1122758_-	PTS system cellobiose-specific component IIB	NA	NA	NA	NA
SQF60664.1\|1122780_1124775_-	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA
SQF60666.1\|1124880_1125975_-	outer surface protein	NA	NA	NA	NA
SQF60669.1\|1125983_1127384_-	beta-glucosidase	NA	NA	NA	NA
SQF60671.1\|1127608_1128304_+	nicotinamide mononucleotide transporter	NA	NA	NA	NA
SQF60673.1\|1128308_1128467_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQF60675.1\|1128535_1129849_-	GTPase ObgE	NA	NA	NA	NA
SQF60677.1\|1129905_1130034_-	membrane protein	NA	NA	NA	NA
SQF60679.1\|1130275_1130791_+\|transposase	transposase	NA	NA	NA	NA
SQF60681.1\|1130811_1131618_+\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	1.1e-63	50.0
SQF60686.1\|1131917_1132790_-	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA
SQF60688.1\|1133013_1134324_+	membrane protein	NA	NA	NA	NA
SQF60690.1\|1134401_1134695_+\|transposase	transposase	NA	NA	NA	NA
SQF60692.1\|1134727_1135450_+\|integrase	integrase core domain protein	A0A1P8CWQ3	Bacillus_phage	1.9e-38	40.1
1136967:1136983	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1174004 : 1255263

Streptococcus_phage(62.71%)

head,integrase,holin,tRNA,tail,terminase,protease,transposase

attL 1216355:1216374|attR 1252648:1252667

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF60753.1\|1174004_1174298_+\|transposase	transposase	NA	NA	NA	NA
SQF60755.1\|1174330_1175053_+\|integrase	integrase core domain protein	A0A1P8CWQ3	Bacillus_phage	1.9e-38	40.1
SQF60757.1\|1175256_1175952_-\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQF60759.1\|1175970_1176732_-	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF60760.1\|1176728_1176944_-	XRE family transcriptional regulator	NA	NA	NA	NA
SQF60762.1\|1176984_1177119_-	Uncharacterised protein	NA	NA	NA	NA
SQF60763.1\|1177304_1179923_-\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	1.8e-62	34.1
SQF60765.1\|1180309_1181365_-	foldase protein prsA 1	NA	NA	NA	NA
SQF60767.1\|1181427_1182099_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.9e-08	27.2
SQF60769.1\|1182200_1183397_-	major facilitator superfamily protein	NA	NA	NA	NA
SQF60771.1\|1183772_1185578_-	oligoendopeptidase F	NA	NA	NA	NA
SQF60772.1\|1185590_1186553_-	competence CoiA-like family protein	NA	NA	NA	NA
SQF60774.1\|1186847_1187564_-	16S pseudouridylate synthetase	NA	NA	NA	NA
SQF60776.1\|1187682_1188387_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQF60778.1\|1188588_1189617_+\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQF60780.1\|1189656_1190844_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQF60783.1\|1190957_1191548_-	S11 family peptidase	NA	NA	NA	NA
SQF60785.1\|1191772_1192006_-	beta-lactamase	NA	NA	NA	NA
SQF60786.1\|1192172_1192778_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
SQF60789.1\|1192874_1193915_-	DNA polymerase III subunit delta	NA	NA	NA	NA
SQF60791.1\|1193985_1196229_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	9.8e-54	58.7
SQF60793.1\|1196209_1196872_-	comE operon 1 domain-containing protein	NA	NA	NA	NA
SQF60795.1\|1197070_1197811_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQF60797.1\|1197850_1198705_+	methyltransferase	NA	NA	NA	NA
SQF60799.1\|1198694_1198973_+	GIY-YIG catalytic domain-containing protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
SQF60800.1\|1198996_1200997_-	Kup system potassium uptake protein	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	6.4e-65	34.0
SQF60802.1\|1201123_1202743_-	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
SQF60804.1\|1203049_1204594_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	9.8e-37	29.3
SQF60806.1\|1204841_1205537_-	integral membrane family protein	NA	NA	NA	NA
SQF60808.1\|1205640_1207008_-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase	NA	NA	NA	NA
SQF60810.1\|1207206_1208253_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
SQF60811.1\|1208353_1208950_-	recombination protein	NA	NA	NA	NA
SQF60813.1\|1209746_1210526_-	formate transporter	NA	NA	NA	NA
SQF60815.1\|1210649_1211192_-	membrane protein	NA	NA	NA	NA
SQF60817.1\|1211352_1211874_-	3H domain-containing protein	NA	NA	NA	NA
SQF60819.1\|1211980_1212676_-	phosphoglyceromutase	NA	NA	NA	NA
SQF60820.1\|1212914_1213850_+	dihydroorotate dehydrogenase 1A	A0A1V0SH91	Hokovirus	4.6e-66	45.1
SQF60822.1\|1214149_1216012_-	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	1.1e-90	34.0
1216355:1216374	attL	NA	NA	NA	NA
SQF60824.1\|1216543_1216726_-	paratox	A3F673	Streptococcus_phage	1.4e-19	76.7
SQF60826.1\|1216964_1217765_+	streptodornase	NA	NA	NA	NA
SQF60828.1\|1218035_1218470_+	phage membrane protein	NA	NA	NA	NA
SQF60829.1\|1218539_1219748_-	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	4.1e-208	84.6
SQF60832.1\|1219863_1220091_-	phage protein	A7J2B3	Streptococcus_phage	5.8e-31	98.7
SQF60833.1\|1220087_1220363_-\|holin	phage holin	A7J2B2	Streptococcus_phage	2.6e-41	100.0
SQF60835.1\|1220372_1220990_-	phage protein	Q938J7	Temperate_phage	1.1e-76	88.3
SQF60837.1\|1220992_1221424_-	phage protein	Q938J8	Temperate_phage	3.9e-68	95.8
SQF60839.1\|1221435_1223220_-	phage minor structural, region domain-containing protein	Q938J9	Temperate_phage	4.1e-95	47.3
SQF60840.1\|1223234_1224236_-	hyaluronidase	Q938K0	Temperate_phage	2.3e-127	71.6
SQF60842.1\|1224235_1226194_-	phage endopeptidase	M1PKG3	Streptococcus_phage	5.3e-96	49.2
SQF60844.1\|1226190_1226886_-	phage protein	A0A1B1P761	Bacillus_phage	7.6e-05	29.6
SQF60846.1\|1226882_1229240_-	phage protein	M1NRG5	Streptococcus_phage	6.5e-141	50.6
SQF60847.1\|1229239_1229890_-	phage protein	M1PL84	Streptococcus_phage	6.6e-35	62.4
SQF60849.1\|1229900_1230494_-\|tail	major tail protein	M1PKG8	Streptococcus_phage	2.7e-59	62.5
SQF60851.1\|1230505_1230841_-	phage protein	A0A1P8BMR5	Lactococcus_phage	9.8e-35	64.9
SQF60853.1\|1230841_1231078_-	phage protein	A0A0B5A7G2	Streptococcus_phage	2.5e-21	71.4
SQF60856.1\|1231070_1231409_-	phage protein	M1PFF8	Streptococcus_phage	2.2e-42	70.3
SQF60858.1\|1231368_1231791_-	phage Gp19/Gp15/Gp42 family protein	A0A0B5A2F6	Streptococcus_phage	3.7e-47	70.8
SQF60860.1\|1231800_1232001_-	phage protein	NA	NA	NA	NA
SQF60862.1\|1232000_1232546_-\|head	phage, major head protein	M1PFL0	Streptococcus_phage	1.4e-54	62.0
SQF60864.1\|1232511_1232913_-\|head	phage, major head protein	M1PFL0	Streptococcus_phage	5.2e-51	73.6
SQF60865.1\|1232937_1233399_-	phage protein	M1Q1L0	Streptococcus_phage	4.5e-38	53.2
SQF60867.1\|1233479_1234895_-\|terminase	phage terminase	A0A0B5A091	Streptococcus_phage	2.9e-213	74.2
SQF60869.1\|1235004_1235271_-	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	7.3e-33	86.4
SQF60871.1\|1235263_1235443_-	phage protein	NA	NA	NA	NA
SQF60873.1\|1235492_1235717_-	phage protein	NA	NA	NA	NA
SQF60875.1\|1235722_1237216_-	phage protein	M1Q184	Streptococcus_phage	2.0e-87	55.0
SQF60877.1\|1237208_1238477_-	structural phage protein	M1PFL4	Streptococcus_phage	2.2e-188	75.6
SQF60878.1\|1238473_1238830_-	phage protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
SQF60880.1\|1239431_1239851_-	phage protein	A0A1X9I5B5	Streptococcus_phage	8.7e-57	79.9
SQF60882.1\|1240118_1240754_-	phage protein	L0P368	Streptococcus_phage	2.0e-89	69.4
SQF60884.1\|1240755_1241025_-	phage protein	A7J287	Streptococcus_phage	9.6e-25	71.9
SQF60886.1\|1241108_1241621_-	phage protein	Q708P9	Streptococcus_phage	2.3e-67	78.0
SQF60888.1\|1241617_1241959_-	phage protein	M1NS23	Streptococcus_phage	1.1e-12	38.7
SQF60890.1\|1242136_1242304_-	phage protein	A0A1S5SEF3	Streptococcus_phage	3.3e-07	51.9
SQF60892.1\|1242313_1243111_-	phage protein	J7KGZ1	Streptococcus_phage	6.0e-131	84.5
SQF60893.1\|1243107_1244037_-	recombinase, phage RecT family protein	M1NRN6	Streptococcus_phage	1.1e-91	72.2
SQF60895.1\|1244039_1244369_-	phage protein	J7KGX3	Streptococcus_phage	2.1e-45	83.5
SQF60900.1\|1244424_1244631_-	phage protein	NA	NA	NA	NA
SQF60902.1\|1244639_1244780_-	phage protein	NA	NA	NA	NA
SQF60903.1\|1244776_1245010_-	phage protein	Q938N1	Temperate_phage	6.1e-36	94.8
SQF60906.1\|1244990_1245380_-	DNA replication protein dnaD	Q938N2	Temperate_phage	9.3e-45	81.4
SQF60908.1\|1245863_1246049_-	phage protein	Q938N3	Temperate_phage	5.8e-21	88.5
SQF60910.1\|1246050_1246362_-	excisionase	A0A1S5SA25	Streptococcus_phage	4.1e-43	78.4
SQF60911.1\|1246439_1246625_-	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQF60913.1\|1246791_1247031_+	phage protein	NA	NA	NA	NA
SQF60915.1\|1247172_1247979_+	protein Ymh	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
SQF60917.1\|1247913_1248180_-	phage protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
SQF60919.1\|1248211_1248928_-	phage antirepressor KilAC domain-containing protein	C9WB91	Streptococcus_virus	5.8e-117	87.3
SQF60920.1\|1248939_1249131_-	phage protein	A7J270	Streptococcus_phage	4.0e-25	92.1
SQF60922.1\|1249437_1249587_+	Uncharacterised protein	NA	NA	NA	NA
SQF60924.1\|1250284_1250632_+	Cro/CI family phage transcriptional regulator	A0A1S5SEQ8	Streptococcus_phage	3.6e-40	71.8
SQF60925.1\|1250635_1251016_+	peptidase	A0A1S5SFH2	Streptococcus_phage	8.0e-41	61.1
SQF60927.1\|1251027_1251294_+	phage protein	NA	NA	NA	NA
SQF60929.1\|1251417_1252560_+\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
SQF60931.1\|1252649_1252925_-	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
1252648:1252667	attR	NA	NA	NA	NA
SQF60938.1\|1253023_1253611_-	membrane protein	NA	NA	NA	NA
SQF60940.1\|1253588_1254449_-	GDSL family lipase	NA	NA	NA	NA
SQF60942.1\|1254423_1255263_-	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7

DBSCAN-SWA_10

1260625 : 1268430

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF60954.1\|1260625_1261966_-	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	8.2e-40	30.9
SQF60955.1\|1262118_1262973_-	tetrahydrofolate dehydrogenase	A0A249XZQ2	Enterococcus_phage	2.0e-39	39.8
SQF60957.1\|1263180_1264875_-	phosphoglucomutase	A0A1X9I671	Streptococcus_phage	4.5e-128	42.2
SQF60959.1\|1265130_1266129_+\|transposase	transposase	H7BW61	unidentified_phage	2.7e-32	35.0
SQF60961.1\|1266138_1267548_-	deoxyribodipyrimidine photolyase	A0A1V0SGL1	Hokovirus	4.4e-60	32.6
SQF60962.1\|1267695_1268430_-	arginine transport ATP-binding protein	G9BWD6	Planktothrix_phage	6.3e-34	38.4

DBSCAN-SWA_11

1527750 : 1594827

Streptococcus_phage(41.67%)

head,tail,terminase,portal,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF61497.1\|1527750_1528734_-\|transposase	transposase	H7BW61	unidentified_phage	2.1e-32	35.0
SQF61498.1\|1528876_1529830_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
SQF61499.1\|1529924_1530809_-	Fructokinase	NA	NA	NA	NA
SQF61500.1\|1531072_1534072_-	endo-beta-N-acetylglucosaminidase F2	NA	NA	NA	NA
SQF61501.1\|1534302_1536186_-	PTS system sucrose-specific transporter subunit IIABC	NA	NA	NA	NA
SQF61502.1\|1536427_1537867_+	sucrose-6-phosphate hydrolase	NA	NA	NA	NA
SQF61503.1\|1537871_1538837_+	sucrose operon repressor	C6ZCU4	Enterobacteria_phage	8.0e-21	27.7
SQF61504.1\|1538977_1539430_-	transcription antitermination protein NusB	NA	NA	NA	NA
SQF61505.1\|1539422_1539812_-	Gls24 family general stress protein	NA	NA	NA	NA
SQF61506.1\|1539857_1540415_-	elongation factor P	NA	NA	NA	NA
SQF61507.1\|1540510_1540972_-	ComE operon protein 2	F8WPT6	Bacillus_phage	1.1e-33	55.1
SQF61508.1\|1541006_1542080_-	Xaa-Pro dipeptidase	A0A0P0I8D7	Acinetobacter_phage	3.0e-16	32.2
SQF61509.1\|1542195_1545024_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.4e-304	55.6
SQF61510.1\|1545250_1545433_-	paratox	A3F673	Streptococcus_phage	4.4e-21	83.3
SQF61511.1\|1545670_1546471_+	streptodornase	NA	NA	NA	NA
SQF61512.1\|1546740_1547175_+	phage membrane protein	NA	NA	NA	NA
SQF61513.1\|1547244_1548453_-	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	2.6e-210	85.8
SQF61514.1\|1548449_1548560_-	phage membrane protein	A7J2B4	Streptococcus_phage	1.8e-09	97.2
SQF61515.1\|1548568_1548796_-	phage protein	A7J2B3	Streptococcus_phage	7.6e-31	98.7
SQF61516.1\|1548792_1549065_-	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQF61517.1\|1549076_1549709_-	phage protein	Q938J7	Temperate_phage	2.0e-44	49.5
SQF61518.1\|1549711_1550140_-	phage protein	Q938J8	Temperate_phage	8.1e-58	84.3
SQF61519.1\|1550151_1552056_-	Phage infection protein	Q938J9	Temperate_phage	1.1e-210	83.7
SQF61520.1\|1552065_1553073_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.3e-109	63.2
SQF61521.1\|1553069_1555121_-	phage protein	A3F656	Streptococcus_phage	0.0e+00	85.2
SQF61522.1\|1555117_1555897_-\|tail	phage tail protein	A3F655	Streptococcus_phage	1.9e-65	54.0
SQF61523.1\|1555928_1559564_-	tape measure domain protein	U6E979	Streptococcus_phage	3.0e-04	44.4
SQF61524.1\|1559578_1559908_-	phage protein	A0A1P8BLR3	Lactococcus_phage	2.0e-11	41.5
SQF61525.1\|1559949_1560309_-	phage protein	D7RWD6	Brochothrix_phage	4.3e-20	44.5
SQF61526.1\|1560361_1561009_-\|tail	phage major tail protein	D7RWD5	Brochothrix_phage	2.7e-41	52.0
SQF61527.1\|1561018_1561408_-	phage protein	B5SP36	Lactococcus_phage	9.3e-45	67.4
SQF61528.1\|1561404_1561770_-	phage protein	A0A097BY98	Enterococcus_phage	5.9e-17	46.3
SQF61529.1\|1561750_1562059_-	phage protein	A0A2P1JTW8	Anoxybacillus_phage	3.3e-13	41.2
SQF61530.1\|1562055_1562409_-	phage protein	A0A2H4J002	uncultured_Caudovirales_phage	9.7e-25	49.6
SQF61531.1\|1562422_1562665_-	phage protein	NA	NA	NA	NA
SQF61532.1\|1562674_1563757_-	phage protein	A0A2H4J022	uncultured_Caudovirales_phage	9.1e-106	57.4
SQF61533.1\|1563759_1564140_-	phage protein	A0A0K2CNR0	Brevibacillus_phage	2.4e-05	32.5
SQF61534.1\|1564149_1564683_-	phage protein	A0A141E0S7	Streptococcus_phage	4.7e-15	84.2
SQF61535.1\|1564794_1565538_-	antirepressor	M1PKL6	Streptococcus_phage	5.3e-73	56.9
SQF61536.1\|1565539_1565788_-	Uncharacterised protein	NA	NA	NA	NA
SQF61537.1\|1565902_1566082_-	Uncharacterised protein	M1NRK8	Streptococcus_phage	2.6e-18	79.7
SQF61538.1\|1566177_1566447_-	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	2.3e-34	84.1
SQF61539.1\|1566506_1566686_-	Uncharacterised protein	NA	NA	NA	NA
SQF61540.1\|1566676_1568302_-\|head	phage head morphogenesis, SPP1 gp7 family domain protein	U6E9F1	Streptococcus_phage	1.7e-47	44.2
SQF61541.1\|1568282_1569785_-\|portal	phage portal protein, SPP1 family	C9W9H5	Streptococcus_virus	6.0e-140	54.3
SQF61542.1\|1569796_1571086_-\|terminase	terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	1.7e-183	74.9
SQF61543.1\|1571063_1571546_-\|terminase	phage terminase small subunit	E0Y3R8	Staphylococcus_virus	3.3e-15	40.3
SQF61544.1\|1572020_1572461_-	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	5.0e-79	100.0
SQF61545.1\|1572734_1572905_-	phage protein	A0A097PAS8	Streptococcus_pyogenes_phage	1.1e-26	98.2
SQF61546.1\|1572901_1573633_-	phage protein	A0A2H4JBN7	uncultured_Caudovirales_phage	1.4e-25	38.1
SQF61547.1\|1573680_1574445_-	Adenine-specific methyltransferase	A0A1S5SE41	Streptococcus_phage	4.2e-134	92.3
SQF61548.1\|1574434_1574917_-	DNA N-4 cytosine methyltransferase M.NgoMXV	A0A097PAU8	Streptococcus_pyogenes_phage	5.6e-92	99.4
SQF61549.1\|1574904_1575132_-	Uncharacterised protein	NA	NA	NA	NA
SQF61550.1\|1575135_1575408_-	phage protein	A7J287	Streptococcus_phage	1.7e-21	64.4
SQF61551.1\|1575410_1575632_-	phage associated protein	NA	NA	NA	NA
SQF61552.1\|1575628_1576024_-	phage protein	Q5YA86	Bacillus_phage	9.4e-45	65.6
SQF61553.1\|1576016_1576235_-	phage protein	A0A1S5SEA6	Streptococcus_phage	1.3e-16	64.3
SQF61554.1\|1576512_1578786_-	ATPase	Q5YA88	Bacillus_phage	6.4e-279	64.0
SQF61555.1\|1578775_1579405_-	AP2 domain protein	A0A2R4P8H7	Staphylococcus_phage	9.1e-42	43.1
SQF61556.1\|1579414_1580998_-	DNA/RNA helicase	A0A097BY72	Enterococcus_phage	1.3e-233	77.4
SQF61557.1\|1580997_1581633_-	phage protein	A0A097BY29	Enterococcus_phage	4.3e-31	46.7
SQF61558.1\|1581654_1582389_-	phage protein	Q0R597	Streptococcus_phage	1.0e-76	61.3
SQF61559.1\|1582390_1582813_-	phage protein	M1I9V9	Streptococcus_phage	4.2e-35	59.9
SQF61560.1\|1582852_1583932_-	phage protein	A0A0K2CZH1	Paenibacillus_phage	1.8e-98	52.6
SQF61561.1\|1583946_1585266_-	chromosome segregation ATPases	A0A097BY67	Enterococcus_phage	2.9e-154	64.3
SQF61562.1\|1585249_1585495_-	Uncharacterised protein	NA	NA	NA	NA
SQF61563.1\|1585496_1585715_-	phage protein	NA	NA	NA	NA
SQF61564.1\|1585724_1585865_-	phage protein	A0A1P8VVR9	Streptococcus_phage	2.1e-15	88.9
SQF61565.1\|1585894_1586152_-	phage protein	NA	NA	NA	NA
SQF61566.1\|1586558_1586789_+	Uncharacterised protein	NA	NA	NA	NA
SQF61567.1\|1586748_1586895_-	Uncharacterised protein	NA	NA	NA	NA
SQF61568.1\|1586914_1587121_-	Uncharacterised protein	NA	NA	NA	NA
SQF61569.1\|1587268_1587484_-	XRE family transcriptional regulator	J7KK54	Streptococcus_phage	5.0e-32	98.6
SQF61570.1\|1587581_1588265_+	phage protein	A0A1X9I5M7	Streptococcus_phage	1.2e-71	59.4
SQF61571.1\|1588222_1588357_-	Uncharacterised protein	X2KTZ3	Streptococcus_phage	3.4e-07	79.5
SQF61572.1\|1588391_1588550_-	phage protein	J7KH24	Streptococcus_phage	1.7e-21	92.3
SQF61573.1\|1588608_1588824_+	Uncharacterised protein	J7KBX0	Streptococcus_phage	8.8e-29	95.7
SQF61574.1\|1588809_1588959_-	Uncharacterised protein	J7KH12	Streptococcus_phage	4.3e-19	91.8
SQF61575.1\|1589050_1589152_-	Uncharacterised protein	NA	NA	NA	NA
SQF61576.1\|1589318_1590059_+	Repressor protein	J7KJ52	Streptococcus_phage	1.3e-127	92.2
SQF61577.1\|1590130_1590553_+	Lj965 prophage superinfection immunity protein	NA	NA	NA	NA
SQF61578.1\|1590725_1591823_+	DNA integration/recombination/inversion protein	Q938N9	Temperate_phage	5.1e-197	94.8
SQF61579.1\|1592066_1593011_+	magnesium and cobalt transport protein	NA	NA	NA	NA
SQF61580.1\|1593142_1593799_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF61581.1\|1593931_1594171_-	SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent	NA	NA	NA	NA
SQF61582.1\|1594335_1594827_-	single strand binding protein	A0A286QNX2	Streptococcus_phage	1.7e-59	74.2

DBSCAN-SWA_12

1884391 : 1897076

Streptococcus_phage(54.55%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF61841.1\|1884391_1885537_-	DNA integration/recombination/inversion protein	A0A1X9I5Y5	Streptococcus_phage	2.7e-84	44.9
SQF61842.1\|1886780_1887428_-	Cro/CI family transcriptional regulator	A0A2H4JGT9	uncultured_Caudovirales_phage	4.4e-15	28.1
SQF61843.1\|1887593_1887791_+	Cro/CI family transcriptional regulator	A0A1X9I5U5	Streptococcus_phage	3.7e-18	72.3
SQF61844.1\|1887804_1888431_+	phage antirepressor protein	A0A1W6JPC3	Staphylococcus_phage	8.8e-37	41.8
SQF61845.1\|1888444_1888687_+	Prophage antirepressor	NA	NA	NA	NA
SQF61846.1\|1888942_1889275_+	phage protein	NA	NA	NA	NA
SQF61847.1\|1889271_1889493_+	Uncharacterised protein	NA	NA	NA	NA
SQF61848.1\|1889495_1889687_+	phage protein	NA	NA	NA	NA
SQF61849.1\|1889698_1890061_+	phage protein	NA	NA	NA	NA
SQF61850.1\|1890057_1890387_+	phage protein	NA	NA	NA	NA
SQF61851.1\|1890389_1890662_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	3.6e-19	60.0
SQF61852.1\|1890662_1891523_+	replication protein	A0A1X9I6L2	Streptococcus_phage	2.5e-119	72.0
SQF61853.1\|1891540_1893037_+	DNA primase	Q9AZI5	Lactococcus_phage	1.1e-69	38.0
SQF61854.1\|1893492_1893666_+	phage protein	NA	NA	NA	NA
SQF61855.1\|1893667_1893934_+	phage protein	A0A1X9I5U4	Streptococcus_phage	8.9e-15	46.2
SQF61856.1\|1894199_1894802_+	Prophage ps3 protein 07	NA	NA	NA	NA
SQF61857.1\|1894791_1895121_+	Uncharacterised protein	NA	NA	NA	NA
SQF61858.1\|1895378_1895663_+	phage protein	NA	NA	NA	NA
SQF61859.1\|1895768_1896182_+	phage protein	A0A1S5S8W3	Streptococcus_phage	5.1e-09	30.8
SQF61860.1\|1896256_1896457_+	Uncharacterised protein	S6C469	Thermus_phage	5.1e-07	43.9
SQF61861.1\|1896544_1896718_+	phage protein	NA	NA	NA	NA
SQF61862.1\|1896692_1897076_+	phage protein	Q938L8	Temperate_phage	3.7e-14	41.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage