CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483383	Streptococcus cristatus strain NCTC12479 genome assembly, chromosome: 1	3 crisprs	WYL,cas3,DinG,csm6,DEDDh,csa3	22	18	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483383_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483383_1

381054-382807

Orphan

Consensus_repeat	Method
AGNCANAGNGNNTCAGNNTCANTNAG	CRT

35 spacers

The CRISPR arrays of LS483383_1

>merge|LS483383|1|381054-382807|CRT
AGCGCAAGTGCTTCAGCATCAGTAAGCCTAAGCCAGTCAGTTTCAACAAGCGAGTCTGCTTCAGCGTCATTGAGCACAAGTCAGTCTGTCTCAGCAAGTGAATCAGCTTCAACTTCATTGAGCACCAGCCAGTCTGTCTCAACAAGCGAGTCAGCTTCAGCGTCAATGAGCTTGAGTCAATCTGTCTCATTAAGCACAAGCGCCTCAGCGTCATTGAGCTTGAGCCAGTCAGTTTCAACAAGTGAATCAGCTTCAAGCTCATTGAGCACCAGCCAGTCTGTATCAGCCAGCGTAAGTGCTTCAGCGTCATTGAGCTTGAGCCAGTCAGTCTCAGCAAGCACAAGCGCTTCAGCGTCATTGAGCCTGAGTCAATCAGTTTCAACAAGCACAAGCGCTTCAGCATCAGTAAGCCTGAGTCAATCTGTCTCATTAAGCACAAGCGCCTCAGCATCATTGAGCGCAAGCCAGTCTGTATCAACAAGCACAAGCGCTTCAGCATCAGTAAGCCTGAGCCAGTCTGTCTCAGCAAGTGCAAGTGCTTCAGCATCAGTAAGCCTGAGTCAATCTGTCTCAGCAAGTGCCAGTGCTTCAGCATCGTTGAGCTTGAGTCAATCTGTCTCAGTAAGTGCCAGTGCTTCAGCATCAGTGAGCTTAAGCCAGTCTGTATCAGCAAGCGTAAGTACTTCAGCATCAGTAAGCCTGAGTCAGTCAGTTTCAGTAAGTGCCAGTGCTTCAGCGTCAATGAGCTTGAGCCAGTCAGTCTCAGTAAGCACAAGTGCCTCAATTTCATTGAGCACAAGTCAGTCTGTCTCAGCAAGTGCCAGTGCTTCAGCATCAGTAAGCCTGAGTCAATCTGTCTCAGCAAGTGCCAGTGCTTCAGCGTCAATGAGCTTGAGCCAGTCAGTCTCAGTAAGCACAAGTGCTTCAACCTCATTGAGCACCAGCCACTCAGTCTCAACAAGCGCAAGTGCTTCAGCTTCGTTGAGTGGTAGCCAATCCGTCTCATTAAGTAATAGTGCTTCAGCTTCGTTGAGCTTGAGTCAATCAGTTTCAACAAGTGCAAGCGCCTCAGCTTCGTTGAGTGGTAGTCAATCTGCCTCATTGAGTAATAGTGCTTCAGCTTCGTTGAGCTTGAGTCAGTCAGTTTCATTTAGTAATAGTGCTTCAGCATCACTGAGCTTGAGCCAGTCTGTCTCAGTAAGTGCCAGTGCTTCAGCATCAGTGAGCTTAAGCCAGTCTGTATCAGCAAGCGTAAGTACTTCAGCATCAGTAAGCCTGAGTCAGTCAGTTTCAGTAAGTGCCAGTGCTTCAGCGTCAATGAGCTTGAGCCAGTCAGTCTCAGTAAGCACAAGTGCCTCAATTTCATTGAGCACAAGTCAGTCTGTCTCAGCAAGTGAATCAGCTTCAACGTCATTGAGCACCAGCCAATCTGTATCAGTAAGCACAAGTGCCTCAACTTCATTGAGCACCAGCCAGTCAGTTTCAACCAGCGAATCAGCTTCAACCTCGTTGAGCTTGAGTCAGTCTGTCTCAGCAAGCACAAGCGCTTCAGCATCATTGAGCCTGAGTCAATCAGTTTCAACAAGCACAAGCGCTTCAGCATCGTTGAGCTTGAGCCAGTCAGTCTCAGTAAGTGCTAGTGCTTCAGCATCAGTAAGCCTGAGTCAATCTGTCTCAGCAAGTGCCAGTGCTTCAGCATCGTTGAGCTTGAGCCAGTCAGTCTCAGTAAGTGAATCAGCTTCAACTTCATTGAG

>LS483383|1|1|381054-382807|CRT
AGCGCAAGTGCTTCAGCATC	AGTAAGCCTAAGCCAGTCAGTTTCAACA
AGCGAGTCTGCTTCAGCGTC	ATTGAGCACAAGTCAGTCTGTCTCAGCA
AGTGAATCAGCTTCAACTTC	ATTGAGCACCAGCCAGTCTGTCTCAACA
AGCGAGTCAGCTTCAGCGTC	AATGAGCTTGAGTCAATCTGTCTCATTAAGCACAAGCGCCTCAGCGTCATTGAGCTTG
AGCCAGTCAGTTTCAACAAG	TGAATCAGCTTCAAGCTCATTGAGCACC
AGCCAGTCTGTATCAGCCAG	CGTAAGTGCTTCAGCGTCATTGAGCTTG
AGCCAGTCAGTCTCAGCAAG	CACAAGCGCTTCAGCGTCATTGAGCCTG
AGTCAATCAGTTTCAACAAG	CACAAGCGCTTCAGCATCAGTAAGCCTG
AGTCAATCTGTCTCATTAAG	CACAAGCGCCTCAGCATCATTGAGCGCA
AGCCAGTCTGTATCAACAAG	CACAAGCGCTTCAGCATCAGTAAGCCTG
AGCCAGTCTGTCTCAGCAAG	TGCAAGTGCTTCAGCATCAGTAAGCCTG
AGTCAATCTGTCTCAGCAAG	TGCCAGTGCTTCAGCATCGTTGAGCTTG
AGTCAATCTGTCTCAGTAAG	TGCCAGTGCTTCAGCATCAGTGAGCTTA
AGCCAGTCTGTATCAGCAAG	CGTAAGTACTTCAGCATCAGTAAGCCTG
AGTCAGTCAGTTTCAGTAAG	TGCCAGTGCTTCAGCGTCAATGAGCTTG
AGCCAGTCAGTCTCAGTAAG	CACAAGTGCCTCAATTTCATTGAGCACAAGTCAGTCTGTCTCAGCAAGTGCC
AGTGCTTCAGCATCAGTAAG	CCTGAGTCAATCTGTCTCAGCAAGTGCC
AGTGCTTCAGCGTCAATGAG	CTTGAGCCAGTCAGTCTCAGTAAGCACA
AGTGCTTCAACCTCATTGAG	CACCAGCCACTCAGTCTCAACAAGCGCA
AGTGCTTCAGCTTCGTTGAG	TGGTAGCCAATCCGTCTCATTAAGTAAT
AGTGCTTCAGCTTCGTTGAG	CTTGAGTCAATCAGTTTCAACAAGTGCA
AGCGCCTCAGCTTCGTTGAG	TGGTAGTCAATCTGCCTCATTGAGTAAT
AGTGCTTCAGCTTCGTTGAG	CTTGAGTCAGTCAGTTTCATTTAGTAAT
AGTGCTTCAGCATCACTGAG	CTTGAGCCAGTCTGTCTCAGTAAGTGCC
AGTGCTTCAGCATCAGTGAG	CTTAAGCCAGTCTGTATCAGCAAGCGTA
AGTACTTCAGCATCAGTAAG	CCTGAGTCAGTCAGTTTCAGTAAGTGCC
AGTGCTTCAGCGTCAATGAG	CTTGAGCCAGTCAGTCTCAGTAAGCACA
AGTGCCTCAATTTCATTGAG	CACAAGTCAGTCTGTCTCAGCAAGTGAA
TCAGCTTCAACGTCATTGAG	CACCAGCCAATCTGTATCAGTAAGCACA
AGTGCCTCAACTTCATTGAG	CACCAGCCAGTCAGTTTCAACCAGCGAA
TCAGCTTCAACCTCGTTGAG	CTTGAGTCAGTCTGTCTCAGCAAGCACA
AGCGCTTCAGCATCATTGAG	CCTGAGTCAATCAGTTTCAACAAGCACA
AGCGCTTCAGCATCGTTGAG	CTTGAGCCAGTCAGTCTCAGTAAGTGCT
AGTGCTTCAGCATCAGTAAG	CCTGAGTCAATCTGTCTCAGCAAGTGCC
AGTGCTTCAGCATCGTTGAG	CTTGAGCCAGTCAGTCTCAGTAAGTGAA
TCAGCTTCAACTTCATTGAG

Protein	Signature genes	Signature genes Name	Protein_function
LS483383.1\|SQG31735.1\|390234_390990_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31726.1\|378403_378736_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31734.1\|389769_390189_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31737.1\|391920_392688_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31738.1\|392939_394076_-\|L-lactate-oxidase	unknown	unknown	gnl\|CDD\|131755
LS483383.1\|SQG31736.1\|391082_391625_-\|membrane-protein	unknown	unknown	unknown
LS483383.1\|SQG31730.1\|385364_386996_+\|Na/Pi-cotransporter-family-protein	unknown	unknown	gnl\|CDD\|224202
LS483383.1\|SQG31718.1\|366651_367179_+\|Uncharacterized-protein-conserved-in-bacteria	unknown	unknown	gnl\|CDD\|237461
LS483383.1\|SQG31729.1\|382813_384316_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31719.1\|367250_367595_+\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|237616
LS483383.1\|SQG31731.1\|387294_388461_+\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|224733
LS483383.1\|SQG31725.1\|377881_378046_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31721.1\|369342_370806_+\|Holliday-junction-specific-endonuclease	unknown	unknown	gnl\|CDD\|376132
LS483383.1\|SQG31723.1\|375511_376060_-\|tRNA-intron-endonuclease,-N-terminal-domain	unknown	unknown	unknown
LS483383.1\|SQG31727.1\|379213_379996_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31722.1\|374445_375546_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31724.1\|376423_377710_-\|tRNA-intron-endonuclease,-N-terminal-domain	unknown	unknown	unknown
LS483383.1\|SQG31732.1\|388677_388866_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG31733.1\|388877_389723_+\|aldo/keto-reductase-family-oxidoreductase	unknown	unknown	gnl\|CDD\|381297
LS483383.1\|SQG31720.1\|368175_369330_+\|methyltransferase	unknown	unknown	gnl\|CDD\|223194

Protein	Function_ID	Function_description	E-value
LS483383.1\|SQG31719.1\|367250_367595_+\|DivIVA-domain-containing-protein	gnl\|CDD\|237616	PRK14127, PRK14127, cell division regulator GpsB.	4.33442e-40
LS483383.1\|SQG31731.1\|387294_388461_+\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|224733	COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism].	8.40159e-175
LS483383.1\|SQG31721.1\|369342_370806_+\|Holliday-junction-specific-endonuclease	gnl\|CDD\|376132	pfam18708, MapZ_C2, MapZ extracellular C-terminal domain 2. In the pneumococcus cell division, MapZ (Midcell Anchored Protein Z) locates at the division site before FtsZ and guides septum positioning. MapZ forms ring structures at the cell equator and moves apart as the cell elongates, therefore behaving as a permanent beacon of division sites. MapZ then positions the FtsZ-ring through direct protein-protein interactions. Structural analysis indicate that it displays a bi-modular structure composed of two subdomains separated by a flexible serine-rich linker. The extracellular C-terminal domain carries a conserved patch of amino acids which plays a crucial function in binding peptidoglycan and positioning MapZ at the cell equator.	3.40115e-43
LS483383.1\|SQG31738.1\|392939_394076_-\|L-lactate-oxidase	gnl\|CDD\|131755	TIGR02708, lactate_oxidase, L-lactate oxidase. Members of this protein oxidize L-lactate to pyruvate, reducing molecular oxygen to hydrogen peroxide. The enzyme is known in Aerococcus viridans, Streptococcus iniae, and some strains of Streptococcus pyogenes where it appears to contribute to virulence. [Energy metabolism, Other].	0
LS483383.1\|SQG31730.1\|385364_386996_+\|Na/Pi-cotransporter-family-protein	gnl\|CDD\|224202	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism].	0
LS483383.1\|SQG31733.1\|388877_389723_+\|aldo/keto-reductase-family-oxidoreductase	gnl\|CDD\|381297	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. The family includes AKR1A/B/C/D/E/G/I, AKR2A/B/C/D/E, AKR3A/B/C/D/E/G, AKR4A/B/C, AKR5A/B/C/D/E/F/G/H, and similar proteins.	4.53985e-143
LS483383.1\|SQG31718.1\|366651_367179_+\|Uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|237461	PRK13660, PRK13660, hypothetical protein; Provisional.	6.92991e-85
LS483383.1\|SQG31720.1\|368175_369330_+\|methyltransferase	gnl\|CDD\|223194	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].	3.24431e-177

>LS483383.1|SQG31727.1|379213_379996_-|Uncharacterised-protein
MLNELEADSLVETDWLRLTNAEALVLDESDALIEALRLVLKLVLAESEALIEALRLVLRLVLAESEALIEALRLVLRLVLAESEALIEALRLVLNELEADSLVETDWLRLTDAEALVLAESDVLIEALRLVLKLVLDESDALIEALRLVLKLVLAESEALIEALRLVLNELEADSLVETDWLKLNDAEADSLVDTDWLVLNDAEADSLVETDWLRLTDAEALALVDTDWLVLNELEAEALAETDLLKLKDAEALALVETD
>LS483383.1|SQG31726.1|378403_378736_-|Uncharacterised-protein
MLNELEADSLVETDWLALNEAEALALAETDWLRLTDAEALALTETDWLKLNDAEALALTETDWLVLNELEADSLVETDWLALNDAEALALAETDWLRLTDAEALVLVETD
>LS483383.1|SQG31725.1|377881_378046_-|Uncharacterised-protein
MLVETDWLKLNDAEALALTETDWLKLNDAEALTLAETDWLVLNELEADSLVETD
>LS483383.1|SQG31724.1|376423_377710_-|tRNA-intron-endonuclease,-N-terminal-domain
MLNEVEADSLADTDWLALIEVEADSLVETDWLKLNDAEALALTETDWLKLNDAEALVLTETDWLKLNDAEALVLTDTDWLVLNDVEADSLAETDWLKLNEAEALVLAETDWLVLNELEADSLVETDWLALNEAEALALAETDWLRLTDAEALALTETDWLKLNDAEALAETDWLVLNELEADSLAETDWLRLTDAEALALAETDWLKLIDAEALVLTDTDWLVLNEVEADSLAETDWLRLKDTETLALTETDWLKLKDAEADSLAETDWLKLNEVEALVLVETDWLALNEVEALALVETDWLRLSDAEALVLTETDWLKLNEAEALVLTETDWLVLNDVEADSLAETDWLKLKDAEALVLTDTDWLVLNEVEADSLADTDWLALIEVEADSLVETDWLKLNEVEADSLVETDWLKLKDAEADSLVETD
>LS483383.1|SQG31723.1|375511_376060_-|tRNA-intron-endonuclease,-N-terminal-domain
MLVETDWLRLTDAEALALAETDWLKLIDAEALVLVETDWLRLNDVEADSLAETDWLRLNEVEALALVETDWLRLSDAEALVLTETDWLKLNEAEALVLTDTDWLALNDAEALVLTETDWLVLNDAEALALVETDWLKLTDAEALALTETDWLKLNDVEADSLVETDWLRLTDAEALALAETD
>LS483383.1|SQG31722.1|374445_375546_-|Uncharacterised-protein
MLKHLHLLRQTDLCSMTLRHLCLLIQTGWCSMKLKQIHLPKQTGSSSMTLKRSCLLRRIDSSSTMLKLTHLLKLTGSGLLMLKHLHLLRQTGSGLLMLKCLCLLRQTDLCSRTLKLIHLLKLIDSSSRTLKHLRLLRLIDSGLLTLKLIHLLKRIDLSSTMLRHLRLLIQTGLRSLRLKQIHLLRLTGSGLLMLKHLHLLRLTGSSSRTLRHLCLLRQTDLCSMTLKQTRLLKLIDSSLLMLKCLYLLRLIDSNSLTLKHLRLLKLTGWCSMTLRQIHLLKRIDCHSTKMKHLHLLKLTGLRSMTLKQTRLLKRTGSSSTKPKRYYSMRQIDYHSVKRRRSYLMKLTDSSSTKMKHYYLMRRIDYR
>LS483383.1|SQG31721.1|369342_370806_+|Holliday-junction-specific-endonuclease
MSKEEKMPTEQESKETVLDLEDAKEMTVGQAARKNEEVEAGVTEGDNILDKYIKQHRDEIEAGKFETQKLRIMEELAQQKEALIQETIKQLKSQSQAKGNTANVPLPSVQPVKAEVANSANVETTKPAQPALTVAAEAPIIPATKPVSNPVPTVFEDEDEPETKPFYKKKGFLYSALGLVALAAGTTWYFHQGRGSHKSTTSSSSTVSSSKKKSTSSSEAKKEAAKEFEDLYASFFTDSSQTAIKNDKFGDLDKLKTKLDVLTGSSEYTAAKKKYDDLVKQISAIQSVNSQFNTGAIVDGLLKTDAQVKENANLPDVSTGNSKLDEVLKAAIAQGRSQQLPAPAPSPTVEPSAPSTAPVAPSTPPAVNPAPSDPSGIRNAETGIGLPSAGVNLQRHLSRVPYNQAAIDDVNNPAWTFNPGVLETILKVSRERGYITGDQFILEKVNIVKGNGYYNLYKPDGTYLFSMNCKTGYFVGNGAGYAEDLDY
>LS483383.1|SQG31720.1|368175_369330_+|methyltransferase
MKERFNLIATAAAGLEAVVGREIRDLGLDCQVENGRVRFNGDMATIIQTNLWLRSADRIKIVVGTFPAKTFEEFFQGVFALDWENYLPLGAKFPISKAKCVKSKLHNEPSVQAISKKAVVKKLQKHYARPEGVPLQENGAEFKIEVSILKDLVTVMIDTSGSSLFKRGYRTEKGGAPIKENMAAAILLLSNWYPDKPLIDPTCGSGTFCIEAAMIGMKMAPGLHRSFAFEDWNWVDKDLVRRLRAEALAQIDQDIQLDISGSDLDARLVEIAKKNAEEAGVADQIHFKQMRLQDLHTDKINGVIISNPPYGERLLDNDAVTKLYQEMGETFAPLKTWSKFILTSDEAFEAKYGSQADKKRKLYNGTLKVDLYQYFGQRVKRQLD
>LS483383.1|SQG31719.1|367250_367595_+|DivIVA-domain-containing-protein
MASIIYTAKDIFDQDFKREVRGYSKAEVDEFLDNVIKDYETYAALVKELREEITLLKEQVSNQETATPSTPSQPAPPTIEMPQMGTATNFDILKRLSRLEKEVFGKQILDNEEQ
>LS483383.1|SQG31718.1|366651_367179_+|Uncharacterized-protein-conserved-in-bacteria
MTSLLIVGYKAFELGITNEKDMRIKIIKEAVRRDLQRLLDEGLEWLIFTGNLGFETWVLEVAQELREDYNFKIATIFLFEDQGKNWNEGNQAKLADFKQVDFVKYAYPSYQNPSQFREYNQFLLQNTDGAYLFYDEENETNLKYLYREMKNQEQYFIKKLTFDDLNEVAEIFSEK
>LS483383.1|SQG31729.1|382813_384316_-|Uncharacterised-protein
MLDESEALIEALRLVLKLVLAESEALSEALRLVLKLVLVESEVLIEALRLVLKLVLAESEALSEALRLVLKLVLAESDALSEELRLVLKLVLAESEALSEALRLVLKLVLAESLALIDALRLVLKLVLAESEALCDALRLVLKLVLAESEALIEALRLVLKLVLAESLALIEALRLVLKLVLIDSEALIEALRLVLRLVLAESEALIEALRLVLKLVLAESEALIEALRLVLKLALAESEALSEALRLVLKLVLAESEALIEALRLVLKLALAESEALSEALRLVLKLVLVESEALIEALRLVLKLALADSEALSEALRLVLKLVLVESEALCDALRLVLKLVLAESEALSEALRLVLKLMLAESEALSEALRLVLKLVLIDSEALIEALRLVLRLVLAESEALIEALRLVLKLVLIDSEALIEVLRLVLRLVLAESDALIEALRLVLKLVLTESEALIEALRLVLKLVLAESDALIEALRLVLRLRLTEAEALALTETD
>LS483383.1|SQG31730.1|385364_386996_+|Na/Pi-cotransporter-family-protein
MSINWQEIIFSFLGGLGLFLYSIRMMGDGLQQAAGDRLRYFIDKYTSNPFLGVLVGIGMTALIQSSSGVTVITVGLVSAGLLTLRQAIGIVMGANIGTTVTSFIIGFKLGDYALPLLFIGAVCLFFTKNRSVNNIGRIFFGVGGIFFALNLMSGAMEPLKDLQVFRDYMVQLSKNPVLGVFVGTGLTLLIQASSATIGILQNLYASNLIDLHGALPVLFGDNIGTTITAIIASLGANIAAKRVAGAHVAFNVLGTIICMIFLLPFTSLIQWFETALHLSPEMTIAFAHGTFNITNTIIQFPFIGFLAYLVTKLIPGEDETVKYESLYLDTILIDQAPSLALGNAKKELLHLGGYAAKSFELAYDYIINYEEKSAEKGHKTEEAINAIDDELTRYLIVLSGQQLNPKESEVLTSILDSSRDLERIGDHSEALLNLTDYLHRKKVEFSPAALAELENIYQLTLDFIKEALTSVETNDVELANTLEAKHAAIDKLERSLRKTHIARLNKGECTPQAGVNFIDIISHYTRVADHAMNLAEKVQMEQI
>LS483383.1|SQG31731.1|387294_388461_+|N-acetylglucosamine-6-phosphate-deacetylase
MPKYIKADQFFYPQGIRKGGFLEVIDGKFGKLVQEVPADAEVVDYTGYSVAPGLVDTHIHGFGGVDVMDNNIEGTLHTMSEGLLTTGVTSFLPTTLTSSYEQLLAVTENIGARYQEASGAKIRGLYFEGPYFTEKYKGAQNPAYMKDPRMDEFRAWQKAANGLLNKIALAPEREGVGEFVRTITDEGVTVALGHSDATYDEAKAAVEAGASVWVHAYNGMRGLTHRELGMVGAMYELPHTYAELICDGHHVDPKACDILLKQKGHEHVALITDCMTAGGLEDGDYMLGEFPVVVANGTARLKSTGNLAGSILQLKDGLKNVVEWGIANPHQAVMMASLIPAKSVHIDDVCGQIKEGYDADFIVLDKDLELVATYLDGEKRFEAVSSVL
>LS483383.1|SQG31732.1|388677_388866_+|Uncharacterised-protein
MKKIDYKFMGMGLVFLFFGLLLHRFLIFIAGLAFIIYSFFSRGMAPTKENIFKPKLAKRKKK
>LS483383.1|SQG31733.1|388877_389723_+|aldo/keto-reductase-family-oxidoreductase
MKNYTLNNGVKIPVLGFGTWKAQDGEEAYQSVLAALKAGYRHIDTAAIYKNEESVGRAIKDSGIPREELFITTKLWNSKHTYEEALEAFDSSMERLGLDYLDLYLIHWPNPKPVREYGAWQKRNAEVWRAMEDLYQAGKIRAIGVSNFLPHHLEALLETARVTPAVNQIRLAPGVYQTEAVDFCRAHDILLEAWGPFGQGELFQNPAVQAIADKYGKTIAQIALAWSLQEGFLPLPKSVTPSRIASNLDCFDIELSPADLDILKNISGLEGGAPNPDGVDF
>LS483383.1|SQG31734.1|389769_390189_-|Uncharacterised-protein
MKLGASCPKMSFFIPERGIFSKNGASFLLFLSSSLSKEKDTKSPLIWHLFLTTNDRGAMDLITRNEKSVRGLDCKDSIGKMTGRGLDCHDSIGKITGRDLSCHDSIRKVTGRGLSRHDSIGKVTGRGLGHYKTSLNTNN
>LS483383.1|SQG31735.1|390234_390990_+|Uncharacterised-protein
MINTTYTIRPLSYSNLTHREFESLMVDSYQVLTIFTSSYRDEDMYSKHLEGFHSKLEQFQAQLANVEKKDSMSLVELDKERDNALVGLFTLHKGFAKIKDRDLKEAYEVLLPVFKKYKDITKHTNAVATAEIKSLLKTLQEEPYQGAVMSLGLLPMLTAVIAAQADYDKGEAEARAVKSAKEVGKTKQLRNEISRSYDLFVRYTAAVAEAYPERSHLTKLLKDLNTIRDSKRRLVGTNKKTKTEEAGERSA
>LS483383.1|SQG31736.1|391082_391625_-|membrane-protein
MEKISYRIGQIIAIAILIFSLWALVKAILFSITFFNNLPTLDTVIIVALVSGTISIASTIAKFIWERQQQKREYLTQKREEPYEQFVAIIYKIVKNKDQNYPELENDILTLNKCLSLWGSKNVVKSWSEFILLSFENTDRQKLLDKSEEILNHMRNDLGVKKTENTILRSLFISDINNLK
>LS483383.1|SQG31737.1|391920_392688_+|Uncharacterised-protein
MDKLAIFQMLGEFLNSQFISSMLGALLGAGVAVYIAKLQNKQQLKQLKYEHKLQREFFEKQEGNERERIFLQYTIERAERSYEILSDLRSAKKLFVDAIFELMKSLPNDLKLDEDIEFEKHFSLLYAEYLLPKYDSIIKLRDMLLLTLVIQDDIELSRLKEEVRKEVAIFVDYHKKISQVKIFEEYKEVADDFMSKSKLTEKCDELRTYLTKYITETTFRLVSPERMAEKILKQTKGDLNIRFKVVRKENMKGGN
>LS483383.1|SQG31738.1|392939_394076_-|L-lactate-oxidase
MSYKTSNAEGPVDFINTYDLEPMAQQVIPKAAFGYIASGAEDTFTLRENIRAFNHKLIVPHTLCDVENPSTEIEFAGEKLSSPIIMAPVAAHKLANEQGEVATARGVHEFGSLYTTSSYSTVDLPEISQALQGTPHWFQFYFSKDDGINRHIMDRVKAEGYTAIVLTADATVGGNREVDKRNGFVFPVGMPIVEEYLPEGAGKSMDFVYKSAKQRLSPRDVEFIAEYSGLPVYVKGPQCREDVERSLAAGASGIWVTNHGGRQIDGGPAAFDSLQEVAEAVDKRVPIVFDSGIRRGQHVFKALASGADLVAIGRPAIYGLALGGSVGVRQVFEHLNAELKTVMQLSGTQTIENVKHFKLRHNPYNPTFPVDPRDLKLY

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Crispr_ID: LS483383_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483383_2

710975-711134

Orphan

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	PILER-CR
GCTGTGTTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of LS483383_2

>merge|LS483383|2|710975-711134|PILER-CR,CRISPRCasFinder
GCTGTGTTGTTTCGAATGGTTCCAAAACGTAGGCCAATGCAGCTTCTGCAAACTTCTTGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACTATTTCTCATAACTATTTCATCAAGACCCAGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAT

>LS483383|2|1|710975-711133|PILER-CR
GCTGTGTTGTTTCGAATGGTTCCAAAACGTAGGCCAA	TGCAGCTTCTGCAAACTTCTTGTTTTAGAG
CTGTGTTGTTTCGAATGGTTCCAAAACTATTTCTCAT	AACTATTTCATCAAGACCCAGTTTTAGAGC
TGTGTTGTTTCGAATGGTTCCAAAA

>LS483383|2|1|710975-711134|CRISPRCasFinder
GCTGTGTTGTTTCGAATGGTTCCAAAAC	GTAGGCCAATGCAGCTTCTGCAAACTTCTTGTTTTAGA
GCTGTGTTGTTTCGAATGGTTCCAAAAC	TATTTCTCATAACTATTTCATCAAGACCCAGTTTTAGA
GCTGTGTTGTTTCGAATGGTTCCAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
LS483383.1\|SQG32046.1\|720248_720944_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|133022
LS483383.1\|SQG32047.1\|720948_721290_+\|membrane-protein	unknown	unknown	gnl\|CDD\|378376
LS483383.1\|SQG32042.1\|714785_717074_+\|ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
LS483383.1\|SQG32040.1\|712591_713440_+\|amino-acid-ABC-transporter-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483383.1\|SQG32044.1\|717567_718848_+\|O-acetylhomoserine-(thiol)-lyase	unknown	unknown	gnl\|CDD\|225428
LS483383.1\|SQG32036.1\|709889_710216_+\|camphor-resistance-protein-CrcB	unknown	unknown	gnl\|CDD\|172717
LS483383.1\|SQG32043.1\|717070_717469_+\|dATP-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|240022
LS483383.1\|SQG32041.1\|713447_714638_-\|cation-efflux-family-protein	unknown	unknown	gnl\|CDD\|223131
LS483383.1\|SQG32033.1\|707719_709102_+\|FeS-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
LS483383.1\|SQG32030.1\|705767_706010_-\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969
LS483383.1\|SQG32028.1\|704133_705444_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|237046
LS483383.1\|SQG32031.1\|706114_707050_-\|DHH-subfamily-1-protein	unknown	unknown	gnl\|CDD\|223691
LS483383.1\|SQG32032.1\|707155_707596_+\|flavodoxin	unknown	unknown	gnl\|CDD\|180922
LS483383.1\|SQG32034.1\|709255_709522_+\|chorismate-mutase	unknown	unknown	gnl\|CDD\|168880
LS483383.1\|SQG32035.1\|709518_709893_+\|camphor-resistance-protein-CrcB	unknown	unknown	gnl\|CDD\|184575
LS483383.1\|SQG32037.1\|710333_710681_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
LS483383.1\|SQG32045.1\|718971_719991_+\|UDP-glucose-4-epimerase	unknown	unknown	gnl\|CDD\|187558
LS483383.1\|SQG32039.1\|711950_712580_+\|amino-acid-ABC-transporter,-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483383.1\|SQG32038.1\|711300_711942_+\|amino-acid-(glutamine)-ABC-transporter,-permease-protein	unknown	unknown	gnl\|CDD\|223836
LS483383.1\|SQG32029.1\|705455_705611_+\|putative-extracellular-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
LS483383.1\|SQG32046.1\|720248_720944_+\|glycosyl-transferase	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.14845e-41
LS483383.1\|SQG32047.1\|720948_721290_+\|membrane-protein	gnl\|CDD\|378376	pfam10066, DUF2304, Uncharacterized conserved protein (DUF2304). Members of this family of hypothetical archaeal proteins have no known function.	3.52912e-21
LS483383.1\|SQG32042.1\|714785_717074_+\|ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
LS483383.1\|SQG32040.1\|712591_713440_+\|amino-acid-ABC-transporter-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.15978e-112
LS483383.1\|SQG32044.1\|717567_718848_+\|O-acetylhomoserine-(thiol)-lyase	gnl\|CDD\|225428	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism].	0
LS483383.1\|SQG32036.1\|709889_710216_+\|camphor-resistance-protein-CrcB	gnl\|CDD\|172717	PRK14229, PRK14229, fluoride efflux transporter CrcB.	1.33562e-51
LS483383.1\|SQG32041.1\|713447_714638_-\|cation-efflux-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.23242e-98
LS483383.1\|SQG32033.1\|707719_709102_+\|FeS-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
LS483383.1\|SQG32030.1\|705767_706010_-\|50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	5.7312e-48
LS483383.1\|SQG32028.1\|704133_705444_+\|GTP-binding-protein	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
LS483383.1\|SQG32031.1\|706114_707050_-\|DHH-subfamily-1-protein	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	7.44158e-94
LS483383.1\|SQG32032.1\|707155_707596_+\|flavodoxin	gnl\|CDD\|180922	PRK07308, PRK07308, flavodoxin; Validated.	4.57122e-78
LS483383.1\|SQG32034.1\|709255_709522_+\|chorismate-mutase	gnl\|CDD\|168880	PRK07248, PRK07248, chorismate mutase.	2.82615e-37
LS483383.1\|SQG32035.1\|709518_709893_+\|camphor-resistance-protein-CrcB	gnl\|CDD\|184575	PRK14221, PRK14221, fluoride efflux transporter CrcB.	1.13901e-50
LS483383.1\|SQG32037.1\|710333_710681_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	2.30917e-70
LS483383.1\|SQG32045.1\|718971_719991_+\|UDP-glucose-4-epimerase	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
LS483383.1\|SQG32039.1\|711950_712580_+\|amino-acid-ABC-transporter,-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.8836e-107
LS483383.1\|SQG32038.1\|711300_711942_+\|amino-acid-(glutamine)-ABC-transporter,-permease-protein	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.7559e-64
LS483383.1\|SQG32043.1\|717070_717469_+\|dATP-pyrophosphohydrolase	gnl\|CDD\|240022	cd04664, Nudix_Hydrolase_7, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	6.30742e-23

>LS483383.1|SQG32037.1|710333_710681_+|50S-ribosomal-protein-L19
MNPLIQSLTEGQLRSDIPAFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKGAGISENYTVRKISNGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRALQGKAARIKEIRR
>LS483383.1|SQG32036.1|709889_710216_+|camphor-resistance-protein-CrcB
MIWVLLIACGLGALVRYFFSKVNSRATLPIGTLMANVLGTFLIGYFYNHIQDKQLYSILATGFCGGLTTLSTFNAELAELFSDRKKFSLYLMLTYFIGFLAILLGIFI
>LS483383.1|SQG32035.1|709518_709893_+|camphor-resistance-protein-CrcB
MSEVKNSLAIFLGAMLGGLLRYQCSSFFTFTGYFPLATLLVNYLGTFLLIYLVKGYLSRKQVSKRLLLALSTGFCGGLTTFSSLLLDSLKLLDLGRYPELLLYLALSIGGSLCIALWAGRKVTA
>LS483383.1|SQG32034.1|709255_709522_+|chorismate-mutase
MTLEEIRQEIDQVDDALVALLEQRMNLVGQVVAFKQSNGKAVADPKREERIFARVASKIENKDYQETILATFADILKHSRAFQEKQIR
>LS483383.1|SQG32033.1|707719_709102_+|FeS-assembly-protein-SufB
MKERDYAFGFHDDIKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGPDLSGIRFDDIIYYQKLSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAVAQYESEVVYYNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENVGQFERSLMIIEEGGSIQYIEGCTAPTYTTNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVEEGGTLEWIDGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG
>LS483383.1|SQG32032.1|707155_707596_+|flavodoxin
MTLAKIVFASMTGNTEEIADIVADKLRELDVEVEVDECTTVDAEDFLEADITIVATYTYGDGELPDEMMDFYEDLSGLDLSGKVYGVVGSGDTFYDEFCKAVDDFDAVFAATGAVKGSECVKVDLSAEEDDIERLEAFAEELVSKV
>LS483383.1|SQG32031.1|706114_707050_-|DHH-subfamily-1-protein
MSIYSKILKKIKEYDKIIIHRHMRPDPDAIGSQVGLQKLLQLNFPEKSIKVTGYDEPSLTWLAKMDEVTDADYEQALVIVCDTANTPRIDDQRYSMGDFLIKIDHHPNDDAYGDLLLVDTDASSTSEIIALFAFENHLEANDYIAKLLYAGIVGDTGRFLYPATTARTFEVAGKLRQYAFNFSELSRKMDSITHQVAKLQGYVYDNLEIDENGAARVILSQQLLKENHLTDADTSAIVAAPGRIEDVQMWAIFVEQPDGHYRVRMRSKFTPINEIAKQHNGGGHPLASGANAYSKDEVDLIYQKLKERAKK
>LS483383.1|SQG32030.1|705767_706010_-|50S-ribosomal-protein-L31
MRKDIHPEYRPVVFMDTTTGYKFLSGSTKRSNETVEFEGETYPLIRVEISSDSHPFYTGRQKFTQADGRVDRFNKKYGLK
>LS483383.1|SQG32029.1|705455_705611_+|putative-extracellular-protein
MGDKPISFRDENGNFVSAADVWNAEKLEELFNRLNPNRKLRLEREKLKENQ
>LS483383.1|SQG32028.1|704133_705444_+|GTP-binding-protein
MSMFLDTAKIQVKAGKGGDGMVAFRREKYVPNGGPWGGDGGRGGDVIFVVDEGLRTLMDFRYNRHFKAQSGEKGMTKGMHGRGAEDLIIRVPQGTTVRDAETGKVITDLIEHGQRFVVAHGGRGGRGNIRFATPKNSAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITSAKPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKEFKQKLAANYDEFEELPQIFPISSLTKQGLATLLDATAELLDKTPEFLLYEESDMEDEAYYGFDEEAPAFEISRDDDATWVLSGDKLEKLFTMTNFDRDESIMKFSRQLRGMGVDEALRARGAKDGDLVRIGKFEFEFVD
>LS483383.1|SQG32038.1|711300_711942_+|amino-acid-(glutamine)-ABC-transporter,-permease-protein
MSYILEILPSLLSGAATTLQVFALVLVFSIPLGIMLAFSMQIRLKPLQWLLHIYIWIMRGTPLLLQLIFIYYVLPSLGIRLDRIPAAIIAFTLNYAAYFAEIFRGGISSIPTGQYEAAKVLKFTPVQTIRLIILPQVVKIVLPSVFNEVMTLVKDTSLVYALGISDLILASRTAANRDASLAPMFVAGLIYLLLIGLATLVAKQVEKKFSYYK
>LS483383.1|SQG32039.1|711950_712580_+|amino-acid-ABC-transporter,-ATP-binding-protein
MLELRNISKKFGDKQILKDFNLIVPEKQVLAIVGPSGGGKTTLLRMLAGLETIDSGQVIYNGEILDVAELEKRNLLGFVFQDFQLFPHLSVLENLTLSPIHTMNVSKEEAEEKAQALLTRLGLSEHAKAYPYSLSGGQKQRVALARTMMINPEIIGYDEPTSALDPALRLEVEKLILQNREMGMTQIVVTHDLQFAENIADSILKVIPK
>LS483383.1|SQG32040.1|712591_713440_+|amino-acid-ABC-transporter-binding-protein
MKLKNILLTCLTLILTFLLSACSSNVSDPSLDNWSKYEEKKQITIGFDNTFVPMGFEQKDGTYAGFDIDLANAVFEEYGIKVKWQPIDWDMKETELTNGTIDLIWNGYSATDERREKVEFTIPYMKNEQVLVSKKSSHISQASDMVGKVLGAQAGSSGYVAFESNPEILKTIVKNHTATQYQSFNEALIDLQNDRIDGLLIDRVYANYYLTEEGILDQYSVFSVGFESEDFAVGARKADRTLVEKVNAAFGKLYQEGKFQKIAEKWFGEDIATDQVKAYKNN
>LS483383.1|SQG32041.1|713447_714638_-|cation-efflux-family-protein
MNNHPSDNLKLAERGALLAIATYIGLSVTKIIAGTALTSSSLTADGFNNVSDIVANIAVLIGLRMARKPADKDHRFGHWKIEDLASLITSFIMFFVGFNVLIDTAQKIINKEETLIDPVGAIVGIVSAIIMFGVYLYNKNLAKRVKSKALDAAAKDNLSDAITSLGTSVAIIASSLKFPIVDRLAAIIITFFILKTAYDIFMESSFSLSDGFDQDLLDDYKRAILEIPKITRVKSQRGRTYGSNIYLDIILEMNPDLSVFESHEIADQVEDMLKEDFGVFDIDIHIEPAPIPEDEILDNVYQKLLMREQLVDQGSQLDALISSDFVYISQDGRQLNKEEFQLERAQTSPIKNLEITSVSQKTKLIRYQIGDVIHTSLWRRHEVWQNIFHQETRKNN
>LS483383.1|SQG32042.1|714785_717074_+|ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITFTNKAAREMKERAAALNPATQDCLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKNLNLDPKKWNERAILGTISNAKNDLIDEVAYANLAGDIYTEIVAKCYTAYQKELRQSEAMDFDDLIMLTLRLFDQNPDVLTYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKTILQAANEVIRNNRNRRPKNLWTQNEDGEEIVYYRANDEQDEALFVARTIDQLSREGYSHKDFAVLYRTNAQSRTVEEALLKANIPYTMVGGTKFYSRKEIRDVISYLNLIANPSDNISYERVVNEPKRGVGPGTVEKIRDFAASQEISLLEASANIMLSPVKGKAAQAVYEFANLILDLRDRLDDYSVTELVELVLKKTGYAAALAAQATLESQARIENIEEFLSVTKNFDENPDNPADETGLDKLSRFLNDLALIADTDDGDMESSEVTLMTLHAAKGLEFPVVFLVGMEENVFPLSRASEDEDELEEERRLAYVGITRAEKILYLTNANSRLLYGRTNYNQPTRFLREISSDLLNYQGLARPANSSFKVSYTNSDTSKFGQGMSLAQALQERKRQAAPSSISTNSLPFGKSSQSQPSKPEVAWAIGDIAHHKKWGDGTVLAVSGSGNSQELKISFPEVGLKKVLASIAPIEKKS
>LS483383.1|SQG32043.1|717070_717469_+|dATP-pyrophosphohydrolase
MMRQSIEAWIYHPEEREILLLKVEAEKVSFWQPITGGIESGESPEEACLREIKEETSLLLHRSNLTSLGDFMVKIDENLTIHKNLFLVLTEQKAIQISDEHVGAQWVALDKVSSQLYWPSNQATFEIMSEKL
>LS483383.1|SQG32044.1|717567_718848_+|O-acetylhomoserine-(thiol)-lyase
MTREFKFETLQLHAGQTVDPTTKSRALPIYQTTSYVFDDTQEGEDLFALRKPGNIYTRITNPTLSAFEERIAALEGGVGALATASGMAAVTYTILALAHTGDHVVAASTIYGGTFNLLKETLPRYGITTTFVDIENLAEVEAAIQDNTKLVLIESLGNPLINIPDFDDLAELVHAHKIPLISDNTFATPYLINVFSHGVDIAVHSATKFIGGHGTSIGGVIVDSGRFDWEASCKFPQFVDPDPSYHDISYTRDVGAAAFVTAVRTQLLRDTGAAMSPFNAFLFLQGLETLSLRVERHVSNAEKIVEFLAGHPKVEQVNYPKLADRPYHALAEKYFPKGVGSIFTFNVKGGEKEARKVIDSLEIFSDLANVADAKSLVVHPATTTHGQMSPEAQLAAGITPNQIRLSIGLENVDDLIEDLRIALESI
>LS483383.1|SQG32045.1|718971_719991_+|UDP-glucose-4-epimerase
MRHKILVTGGAGFIGTHTVIELVNAGHEVVVVDNLINSNKKSIEIVEKIVGKNIPFYIADVCDEEKLLEIFTKERPTGVIHFAALKAVGESTEIPLTYYKNNITGVLTLLKVMEEVNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMTEEILTDIYKADISWNVVILRYFNPIGAHESGDLGENPNGIPNNLLPYVTQVAVGKLPSVRVFGNDYPTVDGTGVRDYIHVVDLARGHVAALQKLEGKSGLNIYNLGTGKGYSVLEIIKNMEKAVGKKIPYEITERRAGDIASCYADSKKAKDELGWEAEFDIERMCQDAWRWQSKHPNGFDD
>LS483383.1|SQG32046.1|720248_720944_+|glycosyl-transferase
MKSSDLLIIIPAYNEEASIVSVVDNIIQNYSQYDYVIINDGSKDQTSAISHAKGYNIVDLPVNLGLAGAFQTGLRYAYEKGYKKAVQFDADGQHLPEYISVLEEMIDSGYEMVIGSRFVTEKRENSLRMLGNTLISGAIKLTTGKTINDPTSGMRMFSENLIKEFALNINYGPEPDTVSYLIRHGVKVAEAQVRMRERQAGESYLTFSRSIQYMIHMFASILIIQNFRKRG
>LS483383.1|SQG32047.1|720948_721290_+|membrane-protein
MTIWFQVVLTIVSILTCSFILRSIRKSQVQINDALFWIFFSIVLLVFSIFPKLAEKIANALGIVSAVNFIFLFIIFLLLINQFQLTLKLSKLDTKFKNLVQIIALRNKDEDTH

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Crispr_ID: LS483383_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483383_3

1147114-1147193

Orphan

Consensus_repeat	Method
TTCTGGTGTCTGCCACCGCTTGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483383_3

>merge|LS483383|3|1147114-1147193|CRISPRCasFinder
TTCTGGTGTCTGCCACCGCTTGGCCCGTACGTCCAAGATTGCTATCGGATTTTGTTCTGGTGTCCGCCACCGCTTGGCCC

>LS483383|3|2|1147114-1147193|CRISPRCasFinder
TTCTGGTGTCTGCCACCGCTTGGCCC	GTACGTCCAAGATTGCTATCGGATTTTG
TTCTGGTGTCCGCCACCGCTTGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
LS483383.1\|SQG32459.1\|1152423_1152783_-\|PrgI-family-protein	unknown	unknown	gnl\|CDD\|378907
LS483383.1\|SQG32463.1\|1155847_1156336_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG32449.1\|1138840_1139842_+\|lipoprotein,-NLP/P60-family	unknown	unknown	gnl\|CDD\|372680
LS483383.1\|SQG32450.1\|1139856_1140774_+\|putative-conjugative-transposon-protein	unknown	unknown	gnl\|CDD\|372237
LS483383.1\|SQG32447.1\|1134216_1136664_+\|Type-IV-secretory-pathway,-VirB4-components	unknown	unknown	gnl\|CDD\|315512
LS483383.1\|SQG32460.1\|1152836_1153691_-\|membrane-protein	unknown	unknown	unknown
LS483383.1\|SQG32457.1\|1147290_1150104_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380090
LS483383.1\|SQG32466.1\|1157548_1157782_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG32454.1\|1144692_1144923_+\|Helix-turn-helix-domain	unknown	unknown	gnl\|CDD\|378900
LS483383.1\|SQG32448.1\|1136732_1138844_+\|Tn916-ORF15-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|226809
LS483383.1\|SQG32455.1\|1145383_1145587_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|286167
LS483383.1\|SQG32452.1\|1143415_1143769_-\|anaerobic-benzoate-catabolism-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375856
LS483383.1\|SQG32453.1\|1144273_1144696_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
LS483383.1\|SQG32461.1\|1153707_1153950_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483383.1\|SQG32462.1\|1153970_1155848_-\|TraG/TraD-family-protein	unknown	unknown	gnl\|CDD\|226036
LS483383.1\|SQG32464.1\|1156325_1156625_-\|Tn5253-bacteriocine-putative	unknown	unknown	unknown
LS483383.1\|SQG32458.1\|1150115_1152473_-\|Type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|274279
LS483383.1\|SQG32451.1\|1141150_1143070_+\|tetracycline-resistance-protein-TetM	unknown	unknown	gnl\|CDD\|206731
LS483383.1\|SQG32456.1\|1145668_1146886_+\|Mobile-element-protein	unknown	unknown	gnl\|CDD\|334163
LS483383.1\|SQG32465.1\|1156958_1157546_-\|Tn5253-CAAX-amino-terminal-protease-family	unknown	unknown	gnl\|CDD\|376806

Protein	Function_ID	Function_description	E-value
LS483383.1\|SQG32459.1\|1152423_1152783_-\|PrgI-family-protein	gnl\|CDD\|378907	pfam12666, PrgI, PrgI family protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.	1.14154e-14
LS483383.1\|SQG32449.1\|1138840_1139842_+\|lipoprotein,-NLP/P60-family	gnl\|CDD\|372680	pfam13702, Lysozyme_like, Lysozyme-like.	7.50929e-80
LS483383.1\|SQG32450.1\|1139856_1140774_+\|putative-conjugative-transposon-protein	gnl\|CDD\|372237	pfam12642, TpcC, Conjugative transposon protein TcpC. This family of proteins are annotated as conjugative transposon protein TcpC. The transfer clostridial plasmid (tcp) locus is part of some conjugative antibiotic resistance and virulence plasmids. TcpC was one of five genes whose products had low-level sequence identity to Tn916 proteins, having similarity to ORF13 homologs from Tn916, Tn5397, and CW459tet. This family of proteins is found in bacteria. Proteins in this family are typically between 302 and 351 amino acids in length.	2.59172e-74
LS483383.1\|SQG32447.1\|1134216_1136664_+\|Type-IV-secretory-pathway,-VirB4-components	gnl\|CDD\|315512	pfam12846, AAA_10, AAA-like domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	0
LS483383.1\|SQG32457.1\|1147290_1150104_-\|CHAP-domain-containing-protein	gnl\|CDD\|380090	pfam18013, Phage_lysozyme2, Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer.	4.41389e-36
LS483383.1\|SQG32454.1\|1144692_1144923_+\|Helix-turn-helix-domain	gnl\|CDD\|378900	pfam12645, HTH_16, Helix-turn-helix domain. This domain appears to be a helix-turn-helix domain suggesting that this might be a transcriptional regulatory protein. Some members of this family are annotated as conjugative transposon domains.	4.41299e-26
LS483383.1\|SQG32448.1\|1136732_1138844_+\|Tn916-ORF15-signal-peptide-containing-protein	gnl\|CDD\|226809	COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown].	0.000479689
LS483383.1\|SQG32455.1\|1145383_1145587_+\|Mobile-element-protein	gnl\|CDD\|286167	pfam09035, Tn916-Xis, Excisionase from transposon Tn916. The phage-encoded excisionase protein Tn916-Xis adopts a winged-helix structure that consists of a three-stranded anti-parallel beta-sheet that packs against a helix-turn-helix (HTH) motif and a third C-terminal alpha-helix. It is encoded for by Tn916, which also codes for the integrase Tn916-Int. The protein interacts with DNA by the insertion of helix alpha-2 into the major groove and the contact of the hairpin that connects strands beta-2 and beta-3 with the adjacent phosphodiester backbone and/or minor groove. Tn916-Xis stimulates phage excision and inhibits viral integration by stabilizing distorted DNA structures.	1.3564e-15
LS483383.1\|SQG32452.1\|1143415_1143769_-\|anaerobic-benzoate-catabolism-transcriptional-regulator	gnl\|CDD\|375856	pfam18430, DBD_HTH, Putative DNA-binding domain. This is a putative DNA-binding protein dimerization domain found bacterial proteins such as CD3330, (a transposon-related DNA-binding protein from Clostridium difficile). Crystal structure analysis suggests that CD3330 N-terminus is involved in dimer formation and also in crystal packing but the C-terminus is open to solvent.	7.40397e-12
LS483383.1\|SQG32453.1\|1144273_1144696_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.0214e-10
LS483383.1\|SQG32462.1\|1153970_1155848_-\|TraG/TraD-family-protein	gnl\|CDD\|226036	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].	2.41457e-58
LS483383.1\|SQG32458.1\|1150115_1152473_-\|Type-IV-secretion-system-protein	gnl\|CDD\|274279	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.	1.37154e-14
LS483383.1\|SQG32451.1\|1141150_1143070_+\|tetracycline-resistance-protein-TetM	gnl\|CDD\|206731	cd04168, TetM_like, Tet(M)-like family includes Tet(M), Tet(O), Tet(W), and OtrA, containing tetracycline resistant proteins. Tet(M), Tet(O), Tet(W), and OtrA are tetracycline resistance genes found in Gram-positive and Gram-negative bacteria. Tetracyclines inhibit protein synthesis by preventing aminoacyl-tRNA from binding to the ribosomal acceptor site. This subfamily contains tetracycline resistance proteins that function through ribosomal protection and are typically found on mobile genetic elements, such as transposons or plasmids, and are often conjugative. Ribosomal protection proteins are homologous to the elongation factors EF-Tu and EF-G. EF-G and Tet(M) compete for binding on the ribosomes. Tet(M) has a higher affinity than EF-G, suggesting these two proteins may have overlapping binding sites and that Tet(M) must be released before EF-G can bind. Tet(M) and Tet(O) have been shown to have ribosome-dependent GTPase activity. These proteins are part of the GTP translation factor family, which includes EF-G, EF-Tu, EF2, LepA, and SelB.	5.67388e-145
LS483383.1\|SQG32456.1\|1145668_1146886_+\|Mobile-element-protein	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	6.12129e-48
LS483383.1\|SQG32465.1\|1156958_1157546_-\|Tn5253-CAAX-amino-terminal-protease-family	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.21785e-08

>LS483383.1|SQG32456.1|1145668_1146886_+|Mobile-element-protein
MSEKRRDNKGRILKTGESQRKDGRYLYKYIDSFGEPQFVYSWKLVATDRVPAGKRDCISLREKIAELQKDIHDGIDVVGKKMTLCQLYAKQNAQRPKVRKNTETGRKYLMDILKKDKLGVRSIDSIKPSDAKEWAIRMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLKAVLDDDTVPKTVLTEEQEEKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFENRLVNIDHQLLRDTEIGYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGYSDFLFLNRKNYPKVASDYNGMMKGLVKKYNKYNEDKLPHITPHSLRHTFCTNYANAGMNPKALQYIMGHANIAMTLNYYAHATFDSAMAEMKRLNKEKQQERLVA
>LS483383.1|SQG32455.1|1145383_1145587_+|Mobile-element-protein
MKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQIKRKQFEKIIDTLDAI
>LS483383.1|SQG32454.1|1144692_1144923_+|Helix-turn-helix-domain
MKTQYPMIPFPLIVKATDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIK
>LS483383.1|SQG32453.1|1144273_1144696_+|RNA-polymerase-sigma-factor
MKPSSFQTTIENQFDYICKRAMEDERKNYMLYLSRIAKREVSFSDVGDYLVSQFATTDNYSTDFQIFTLNGLSVGVENDLLSEALRELPDKKREILLLFYFMDMSDSEIADLLKLNRSTVYRHRTSGLALIKKFMEEFEE
>LS483383.1|SQG32452.1|1143415_1143769_-|anaerobic-benzoate-catabolism-transcriptional-regulator
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED
>LS483383.1|SQG32451.1|1141150_1143070_+|tetracycline-resistance-protein-TetM
MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPVYHGSAKSNIGIDNLIEVITNKFYSSTHRGPSELCGNVFKIEYSEKRQRLAYIRLYSGVLHLRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVAQLPLGSGVQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT
>LS483383.1|SQG32450.1|1139856_1140774_+|putative-conjugative-transposon-protein
MMKFRKNQNKEKQIPKEKKPRVYYKVNPHKKVVIALWVLLGLSFSFAIFKHFTAIDTHTIHETTIIEKEYVDTHHVENFVENFAKVYYSWEQSDKSIDNRMESLKGYLTDELQALNVDTVRKDIPVSSSVRGFQIWTVEPTGDNEFNVTYSVDQLITEGENTKTVHSAYIVSVYVDGSGNMVLVKNPTITNIPKKSSYKPKAIESEGTVDSITTNEINEFLTTFFKLYPTATASELSYYVNDGILKPIGKEYIFQELVNPIHNRKDNQVTVSLTVEYIDQQTKATQVSQFDLVLEKNGSNWKIIE
>LS483383.1|SQG32449.1|1138840_1139842_+|lipoprotein,-NLP/P60-family
MKLKTLVIGGSGLFLMVFSLLLFVAILFSDEQDSGISNIHYGGVNVSAEVLAHKPMVEKYAKEYGVEEYVNILLAIIQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGVKYFSELLASSERLSVDLESVIQSYNYGGGFLGYVANRGNKYTFELAQSFSKEYSGGEKVSYPNPIAIPINGGWRYNYGNMFYVQLVTQYLVTTEFDDDTVQAIMDEALKYEGWRYVYGGASPTTSFDCSGLTQWTYGKAGINLPRTAQQQYDVTQHIPLSEAQAGDLVFFHSTYNAGSYITHVGIYLGNNRMFHAGDPIGYADLTSPYWQQHLVGAGRIKQ
>LS483383.1|SQG32448.1|1136732_1138844_+|Tn916-ORF15-signal-peptide-containing-protein
MTVAFTLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPWNWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLAGVSANGFSTEGFYVGFLLLLILVLGVYVAYTGLIKRETTKAIHAIMNFVLVFILSASFIAYAPDYIKKINDFSSDISNASLSLGTKIVMPHSDSQGKDSVDLIRDSLFSIQVQQPWLLLQYNSSDIESIGIDRVESLLSTSPDSNNGEDREKIVAEEIEDRSNTNLTITKTINRLGTVFFLFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAITKLFNTILTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIVTFAGIYFKLGDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTTLGAGSAIVTGKKGQSGSGSSARTQADHSRPDGKEKSTLGKRIGQTIGTVADTKDRMVDTASGLKEQVKDLPTNARYAVYQGKSKVKENVRDLTSSISQTKADRASGRKEQQEQRRKTIAKRRSEMEQVKQKKQPASSVHERPTTRQEQYHDEQTSKQSNIQTSYKESQQAKQERPAVKSDFSSPKVERQGNTVQEKTVQKPATSTTTADRTSQRPITKERPSTVQRVPLQNTRSRPPIKTATIKKVGKKP
>LS483383.1|SQG32447.1|1134216_1136664_+|Type-IV-secretory-pathway,-VirB4-components
MAYPIKYIENNLVWNKDGECYAYYELVPYNYSFLSPEQKIQVHDSFRQLIAQNRDGKIHALQISTESSIRSAQERSKNEVTGKLKAVAYDKIDQQTDALISMIGENQVNYRFFIGFKLLLNDQEFSMKSLTVEAKNALSDFVYDVNHKLMGDFVSMSNDEILRFQKMEKLLENKISRRFKIRRLDKDDFGYLIEHLYGQTGTAYEEYEYHLSKKKLDNETLIKYYDLIKPTRCLVEEKQRYLKIQQEDETVYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANRKALSTVRNKKKELKDLDNHAWQSDNETSSNVAEALESVNELETNLDQSKESMYKLSYVVRVSANDLDELKRRCNEVKDFYDDLSVKLVRPFGDMLGLHEEFLPASKRYMNDYIQYVTSDFLAGLGFGATQMLGENEGIYVGYSLDTGRNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFANNLIVYYAVLYGAQAVIVDPKAERGRWKETLPEISHEINIVTLTSDEKNKGLLDPYVIMKNPKDSESLAIDILTFLTGISSRDGERFPILRKAIRAVTNSEVRGLMKVIEELRVENTPLSTSIADHIESFTDYDFAHLLFSNGYVEQSISLEKQLNIIQVADLVLPDKETSFEEYTTMELLSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVYFVTQNTDDLLDEKLKNNLGLKFAFRSTDLNEIKKTLAFFGVDPEDENNQKRLRDLENGQCLISDLYGRVGVIQFHPVFEELLHAFDTRPPVRKEV
>LS483383.1|SQG32457.1|1147290_1150104_-|CHAP-domain-containing-protein
MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVKKQKKDSAVLDEKAWKKEIKGKLEEMREASKARVKQANEDYNHILQNSPPSFLNRKELRDRRLPHARKRMKIAKKQFKEAKAQSKEERKERRKERKTNQKFLYGQELKHKSNFFFQGKSLEELKAKKEVKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNIGKASVKTGQATGRFTKKRLTNTKERYYHFKDGKGWKLAKDNPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPATWIVGGLVFLLLLMMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELNKPVHLFSSETYKDYLSTLWHDLNDGDDLKSMQDLYETPKYKLSKDDQEEMKELKEEGVYASMQELDNPFEGKSNEDSLTMIYRYGYYDLDGKPTLQEYILLEAKAHQTIVAPMDGVVSLDGDNIILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYAHSKNKKWYDLALQLDFMLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGSNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFVGGTHGTPAIYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
>LS483383.1|SQG32458.1|1150115_1152473_-|Type-IV-secretion-system-protein
MKRKSNTLKKQKTSMTNKKKEVKGKKEEVLPSTANTLSYQALYQNGLMQVKEDYFSQSYLLGDVNYQTVGLEDKGAIIEKYSDLINSLDDQTNFQLTIFNKRLNLEKFRQSVLYEEKEDGYDSYRKELNRMMNQNLDSGENNFSAVKLISFGRKDSNPKQAYRSLSQIGEYFKSGFSEIDARFESLAGEERVNLLADMLRGEHHLPFSYRDLTRSGQTTRHFIAPNLLDFKNKNYIQINDRLLQIVYVRDYGMELGDQFIRDLMQGDLELIVSLHAQSSTKADAMKKLRTKKTLMESQKIGEQQKLARTGIYLEKVGHVLESNIDEAEELLKTMTETGDKLFQTVFLIGVFGQDEEELKQALDTIQQVAGSNDLMIDKLPYMQEAAFNSLLPFGCDFLEGVSRSLLTSNVAVNSPWTSVDLQDRSGKYYGINQISSNIITIDRSLLNTPSGLILGTSGAGKGMATKHEIITTKIKESGENTEIIIVDPEAEYSVIGRAFGGEMIDIAPDSQTYLNVLDLSEENMDEDPVKVKSEFLLSFIGKLLDRKMDGREKSIIDRVTRLTYQSFKEPSLEEWVFVLSQQPEEEAQNLALDMELYVEGSLDIFSHKTNIQTGSNFLIYNVKKLGDELKQIALMVVFDQIWNRVVRNQKLGKKTWIYFDEMQLLLLDKYASDFFFKLWSRVRKYGASPTGITQNVETLLLDPNGRRIIANSEFMILLKQAKNDREELVQLLGLSKELEKYLVNPEKGAGLIKAGSVVVPFKNKIPQGTQLFDIMSTDPDKMASN
>LS483383.1|SQG32459.1|1152423_1152783_-|PrgI-family-protein
MNTRVFKDISKYQHRAWLGFTTRQIIFVLPAFIVTIIVLGLNLFFWQFGDWFVYGFVFAFTIPLMLFGVYKPNDLYFEHYLKYRLHFELTVPLRTITGKKGLEHEKKIKYIKETKNFND
>LS483383.1|SQG32460.1|1152836_1153691_-|membrane-protein
MNLSLVSPFVYLASEKISAENLFEGFNVDLQSTVDLIKSLSSYNPTVWTYMSSITKSVMQPLGVAILSVVLILEFSKMAKKIANSGGAMTFEALAPMLISYIMVAVVITNTTVIVEAIIGIASHAIEQVASIVAHGGAKYDTISGLKGSGFIGRMIVGFFALLIWLVRIVSAAMVNLLVSIRFIQLYLMIPFAPLTIPTFLSDEWKSIGIGYLKNIMVYAVQGVLIFLIVSLVPLFESAGKIAVSNGAGVLQSLAIMFGSLVQAILLIIALVGSQRTARSILGM
>LS483383.1|SQG32461.1|1153707_1153950_-|Uncharacterised-protein
MITHFKGFVYGVDASAMFAQAMSLLQKGLIAVGAFLVVVGIVNLATNIKDGGPGVRNAILEIVGGVMVGAAGAFVTQISI
>LS483383.1|SQG32462.1|1153970_1155848_-|TraG/TraD-family-protein
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKRLFYGKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKTGKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWTDFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPDNDSTFRFLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGNMKRHECLVRIANMPVFKSKKYNSTKHPNWKYLANQETDERWWNYQINPLNQRQENHLEGLRIRDLTFESSLK
>LS483383.1|SQG32463.1|1155847_1156336_-|Uncharacterised-protein
MSSEQQERMAVQYAERSLLFTVKSLLKILEWSRRQALAQDSAYKIGVQKLEELLQSPYAIDTINLKKDFLDKPIDIEKFKAFLEKEEIPLAIAWQGDSLHFYTKDRSILDNHLDHLLEKMVNDPEKLADFTMDKSLDDAIDEAKSQITFRQEGAVKQKEMVR
>LS483383.1|SQG32464.1|1156325_1156625_-|Tn5253-bacteriocine-putative
MKVVNLYDLKQMGNKGGCTIQLIHHFPFGMGLGHLKKDYIEFKRVGIFDGKAVEVTLREPYSRDLLQVVKSIKQRQKLIAYRYKEGKLLFVKKEASDVL
>LS483383.1|SQG32465.1|1156958_1157546_-|Tn5253-CAAX-amino-terminal-protease-family
MKRIIRVYLFQQVNVLLVSLYLLKFLCIGELTILQILYGASLISFLWVYCQRKKVVKLNMKTRIKWLGIGFVSLLIISLCFSLIHAQGSTNQANLIGLQHQVPWFSFLLFLINASMVEEFLYREILWNLVRKLDIRVALTSVLFALAHHPGSILAWCLYVSLGMFLGMVRYKSDLWGSMGLHLVWNLLVYSLLLF
>LS483383.1|SQG32466.1|1157548_1157782_-|Uncharacterised-protein
MAERFWENLSIILAERNISWIELTRKMFAGEFHYPSELNRLYQKIRHYKMEQRMPQSPWVERIVQVLDLDYEDLFRR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	380642-380669	0	1.0
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	380930-380957	0	1.0
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	LS483383.1	375500-375527	0	1.0
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	LS483383.1	380210-380237	0	1.0
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	LS483383.1	380978-381005	0	1.0
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	379988-380015	0	1.0
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	380594-380621	0	1.0
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	380882-380909	0	1.0
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	381026-381053	0	1.0
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	377162-377189	0	1.0
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	377348-377375	0	1.0
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	377900-377927	0	1.0
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	378518-378545	0	1.0
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	378710-378737	0	1.0
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	379472-379499	0	1.0
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	378422-378449	0	1.0
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	378422-378449	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	374954-374981	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	375290-375317	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	375530-375557	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	376010-376037	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	376106-376133	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	377114-377141	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	377252-377279	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	378140-378167	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	378614-378641	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	378848-378875	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	379088-379115	0	1.0
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	379328-379355	0	1.0
LS483383_1	1.18\|381944\|28\|LS483383\|CRT	381944-381971	28	LS483383.1	375794-375821	0	1.0
LS483383_1	1.21\|382088\|28\|LS483383\|CRT	382088-382115	28	LS483383.1	378824-378851	0	1.0
LS483383_1	1.21\|382088\|28\|LS483383\|CRT	382088-382115	28	LS483383.1	380138-380165	0	1.0
LS483383_1	1.22\|382136\|28\|LS483383\|CRT	382136-382163	28	LS483383.1	374546-374573	0	1.0
LS483383_1	1.27\|382376\|28\|LS483383\|CRT	382376-382403	28	LS483383.1	375794-375821	0	1.0
LS483383_1	1.28\|382424\|28\|LS483383\|CRT	382424-382451	28	LS483383.1	380216-380243	0	1.0
LS483383_1	1.28\|382424\|28\|LS483383\|CRT	382424-382451	28	LS483383.1	380984-381011	0	1.0
LS483383_1	1.31\|382568\|28\|LS483383\|CRT	382568-382595	28	LS483383.1	376178-376205	0	1.0
LS483383_1	1.32\|382616\|28\|LS483383\|CRT	382616-382643	28	LS483383.1	378398-378425	0	1.0
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	375308-375335	1	0.964
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	375548-375575	1	0.964
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	376028-376055	1	0.964
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	376124-376151	1	0.964
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	378158-378185	1	0.964
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	378866-378893	1	0.964
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	377180-377207	1	0.964
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	377918-377945	1	0.964
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	379298-379325	1	0.964
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	380258-380285	1	0.964
LS483383_1	1.4\|381218\|58\|LS483383\|CRT	381218-381275	58	LS483383.1	380690-380747	1	0.983
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	379694-379721	1	0.964
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	379970-379997	1	0.964
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	377540-377567	1	0.964
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	380480-380507	1	0.964
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	380720-380747	1	0.964
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	375242-375269	1	0.964
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	377852-377879	1	0.964
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	375242-375269	1	0.964
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	377852-377879	1	0.964
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	375626-375653	1	0.964
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	376346-376373	1	0.964
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	378800-378827	1	0.964
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	LS483383.1	377588-377615	1	0.964
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	LS483383.1	377996-378023	1	0.964
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	LS483383.1	378566-378593	1	0.964
LS483383_1	1.18\|381944\|28\|LS483383\|CRT	381944-381971	28	LS483383.1	376754-376781	1	0.964
LS483383_1	1.18\|381944\|28\|LS483383\|CRT	381944-381971	28	LS483383.1	377516-377543	1	0.964
LS483383_1	1.21\|382088\|28\|LS483383\|CRT	382088-382115	28	LS483383.1	376226-376253	1	0.964
LS483383_1	1.27\|382376\|28\|LS483383\|CRT	382376-382403	28	LS483383.1	376754-376781	1	0.964
LS483383_1	1.27\|382376\|28\|LS483383\|CRT	382376-382403	28	LS483383.1	377516-377543	1	0.964
LS483383_1	1.29\|382472\|28\|LS483383\|CRT	382472-382499	28	LS483383.1	375458-375485	1	0.964
LS483383_1	1.29\|382472\|28\|LS483383\|CRT	382472-382499	28	LS483383.1	376610-376637	1	0.964
LS483383_1	1.29\|382472\|28\|LS483383\|CRT	382472-382499	28	LS483383.1	377042-377069	1	0.964
LS483383_1	1.29\|382472\|28\|LS483383\|CRT	382472-382499	28	LS483383.1	377468-377495	1	0.964
LS483383_1	1.31\|382568\|28\|LS483383\|CRT	382568-382595	28	LS483383.1	380090-380117	1	0.964
LS483383_1	1.35\|382760\|28\|LS483383\|CRT	382760-382787	28	LS483383.1	376658-376685	1	0.964
LS483383_1	1.35\|382760\|28\|LS483383\|CRT	382760-382787	28	LS483383.1	377420-377447	1	0.964
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	379664-379691	2	0.929
LS483383_1	1.1\|381074\|28\|LS483383\|CRT	381074-381101	28	LS483383.1	379940-379967	2	0.929
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	LS483383.1	377180-377207	2	0.929
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	LS483383.1	377918-377945	2	0.929
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	374732-374759	2	0.929
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	376268-376295	2	0.929
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	377366-377393	2	0.929
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	378728-378755	2	0.929
LS483383_1	1.3\|381170\|28\|LS483383\|CRT	381170-381197	28	LS483383.1	379010-379037	2	0.929
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	376682-376709	2	0.929
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	377444-377471	2	0.929
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	LS483383.1	380240-380267	2	0.929
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	LS483383.1	375146-375173	2	0.929
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	LS483383.1	379232-379259	2	0.929
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	375386-375413	2	0.929
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	375818-375845	2	0.929
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	375962-375989	2	0.929
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	376058-376085	2	0.929
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	LS483383.1	376778-376805	2	0.929
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	375818-375845	2	0.929
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	376202-376229	2	0.929
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	376778-376805	2	0.929
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	379184-379211	2	0.929
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	LS483383.1	380114-380141	2	0.929
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	LS483383.1	375722-375749	2	0.929
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	375818-375845	2	0.929
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	376202-376229	2	0.929
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	376778-376805	2	0.929
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	379184-379211	2	0.929
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	LS483383.1	380114-380141	2	0.929
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	LS483383.1	382832-382859	2	0.929
LS483383_1	1.18\|381944\|28\|LS483383\|CRT	381944-381971	28	LS483383.1	380090-380117	2	0.929
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	LS483383.1	374738-374765	2	0.929
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	LS483383.1	379994-380021	2	0.929
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	LS483383.1	380600-380627	2	0.929
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	LS483383.1	380888-380915	2	0.929
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	LS483383.1	381032-381059	2	0.929
LS483383_1	1.21\|382088\|28\|LS483383\|CRT	382088-382115	28	LS483383.1	375650-375677	2	0.929
LS483383_1	1.21\|382088\|28\|LS483383\|CRT	382088-382115	28	LS483383.1	376370-376397	2	0.929
LS483383_1	1.21\|382088\|28\|LS483383\|CRT	382088-382115	28	LS483383.1	379208-379235	2	0.929
LS483383_1	1.27\|382376\|28\|LS483383\|CRT	382376-382403	28	LS483383.1	380090-380117	2	0.929
LS483383_1	1.29\|382472\|28\|LS483383\|CRT	382472-382499	28	LS483383.1	376706-376733	2	0.929
LS483383_1	1.31\|382568\|28\|LS483383\|CRT	382568-382595	28	LS483383.1	376754-376781	2	0.929
LS483383_1	1.31\|382568\|28\|LS483383\|CRT	382568-382595	28	LS483383.1	380312-380339	2	0.929
LS483383_1	1.32\|382616\|28\|LS483383\|CRT	382616-382643	28	LS483383.1	375122-375149	2	0.929
LS483383_1	1.32\|382616\|28\|LS483383\|CRT	382616-382643	28	LS483383.1	376034-376061	2	0.929

1. spacer 1.1|381074|28|LS483383|CRT matches to position: 380642-380669, mismatch: 0, identity: 1.0

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctaagccagtcagtttcaaca	Protospacer
****************************

2. spacer 1.1|381074|28|LS483383|CRT matches to position: 380930-380957, mismatch: 0, identity: 1.0

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctaagccagtcagtttcaaca	Protospacer
****************************

3. spacer 1.2|381122|28|LS483383|CRT matches to position: 375500-375527, mismatch: 0, identity: 1.0

attgagcacaagtcagtctgtctcagca	CRISPR spacer
attgagcacaagtcagtctgtctcagca	Protospacer
****************************

4. spacer 1.2|381122|28|LS483383|CRT matches to position: 380210-380237, mismatch: 0, identity: 1.0

attgagcacaagtcagtctgtctcagca	CRISPR spacer
attgagcacaagtcagtctgtctcagca	Protospacer
****************************

5. spacer 1.2|381122|28|LS483383|CRT matches to position: 380978-381005, mismatch: 0, identity: 1.0

attgagcacaagtcagtctgtctcagca	CRISPR spacer
attgagcacaagtcagtctgtctcagca	Protospacer
****************************

6. spacer 1.3|381170|28|LS483383|CRT matches to position: 379988-380015, mismatch: 0, identity: 1.0

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtctcaaca	Protospacer
****************************

7. spacer 1.3|381170|28|LS483383|CRT matches to position: 380594-380621, mismatch: 0, identity: 1.0

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtctcaaca	Protospacer
****************************

8. spacer 1.3|381170|28|LS483383|CRT matches to position: 380882-380909, mismatch: 0, identity: 1.0

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtctcaaca	Protospacer
****************************

9. spacer 1.3|381170|28|LS483383|CRT matches to position: 381026-381053, mismatch: 0, identity: 1.0

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtctcaaca	Protospacer
****************************

10. spacer 1.5|381296|28|LS483383|CRT matches to position: 377162-377189, mismatch: 0, identity: 1.0

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaagctcattgagcacc	Protospacer
****************************

11. spacer 1.5|381296|28|LS483383|CRT matches to position: 377348-377375, mismatch: 0, identity: 1.0

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaagctcattgagcacc	Protospacer
****************************

12. spacer 1.5|381296|28|LS483383|CRT matches to position: 377900-377927, mismatch: 0, identity: 1.0

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaagctcattgagcacc	Protospacer
****************************

13. spacer 1.5|381296|28|LS483383|CRT matches to position: 378518-378545, mismatch: 0, identity: 1.0

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaagctcattgagcacc	Protospacer
****************************

14. spacer 1.5|381296|28|LS483383|CRT matches to position: 378710-378737, mismatch: 0, identity: 1.0

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaagctcattgagcacc	Protospacer
****************************

15. spacer 1.5|381296|28|LS483383|CRT matches to position: 379472-379499, mismatch: 0, identity: 1.0

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaagctcattgagcacc	Protospacer
****************************

16. spacer 1.8|381440|28|LS483383|CRT matches to position: 378422-378449, mismatch: 0, identity: 1.0

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcttcagcatcagtaagcctg	Protospacer
****************************

17. spacer 1.10|381536|28|LS483383|CRT matches to position: 378422-378449, mismatch: 0, identity: 1.0

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcttcagcatcagtaagcctg	Protospacer
****************************

18. spacer 1.11|381584|28|LS483383|CRT matches to position: 374954-374981, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

19. spacer 1.11|381584|28|LS483383|CRT matches to position: 375290-375317, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

20. spacer 1.11|381584|28|LS483383|CRT matches to position: 375530-375557, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

21. spacer 1.11|381584|28|LS483383|CRT matches to position: 376010-376037, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

22. spacer 1.11|381584|28|LS483383|CRT matches to position: 376106-376133, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

23. spacer 1.11|381584|28|LS483383|CRT matches to position: 377114-377141, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

24. spacer 1.11|381584|28|LS483383|CRT matches to position: 377252-377279, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

25. spacer 1.11|381584|28|LS483383|CRT matches to position: 378140-378167, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

26. spacer 1.11|381584|28|LS483383|CRT matches to position: 378614-378641, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

27. spacer 1.11|381584|28|LS483383|CRT matches to position: 378848-378875, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

28. spacer 1.11|381584|28|LS483383|CRT matches to position: 379088-379115, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

29. spacer 1.11|381584|28|LS483383|CRT matches to position: 379328-379355, mismatch: 0, identity: 1.0

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcctg	Protospacer
****************************

30. spacer 1.18|381944|28|LS483383|CRT matches to position: 375794-375821, mismatch: 0, identity: 1.0

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtcagtctcagtaagcaca	Protospacer
****************************

31. spacer 1.21|382088|28|LS483383|CRT matches to position: 378824-378851, mismatch: 0, identity: 1.0

cttgagtcaatcagtttcaacaagtgca	CRISPR spacer
cttgagtcaatcagtttcaacaagtgca	Protospacer
****************************

32. spacer 1.21|382088|28|LS483383|CRT matches to position: 380138-380165, mismatch: 0, identity: 1.0

cttgagtcaatcagtttcaacaagtgca	CRISPR spacer
cttgagtcaatcagtttcaacaagtgca	Protospacer
****************************

33. spacer 1.22|382136|28|LS483383|CRT matches to position: 374546-374573, mismatch: 0, identity: 1.0

tggtagtcaatctgcctcattgagtaat	CRISPR spacer
tggtagtcaatctgcctcattgagtaat	Protospacer
****************************

34. spacer 1.27|382376|28|LS483383|CRT matches to position: 375794-375821, mismatch: 0, identity: 1.0

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtcagtctcagtaagcaca	Protospacer
****************************

35. spacer 1.28|382424|28|LS483383|CRT matches to position: 380216-380243, mismatch: 0, identity: 1.0

cacaagtcagtctgtctcagcaagtgaa	CRISPR spacer
cacaagtcagtctgtctcagcaagtgaa	Protospacer
****************************

36. spacer 1.28|382424|28|LS483383|CRT matches to position: 380984-381011, mismatch: 0, identity: 1.0

cacaagtcagtctgtctcagcaagtgaa	CRISPR spacer
cacaagtcagtctgtctcagcaagtgaa	Protospacer
****************************

37. spacer 1.31|382568|28|LS483383|CRT matches to position: 376178-376205, mismatch: 0, identity: 1.0

cttgagtcagtctgtctcagcaagcaca	CRISPR spacer
cttgagtcagtctgtctcagcaagcaca	Protospacer
****************************

38. spacer 1.32|382616|28|LS483383|CRT matches to position: 378398-378425, mismatch: 0, identity: 1.0

cctgagtcaatcagtttcaacaagcaca	CRISPR spacer
cctgagtcaatcagtttcaacaagcaca	Protospacer
****************************

39. spacer 1.1|381074|28|LS483383|CRT matches to position: 375308-375335, mismatch: 1, identity: 0.964

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctgagccagtcagtttcaaca	Protospacer
*********.******************

40. spacer 1.1|381074|28|LS483383|CRT matches to position: 375548-375575, mismatch: 1, identity: 0.964

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctgagccagtcagtttcaaca	Protospacer
*********.******************

41. spacer 1.1|381074|28|LS483383|CRT matches to position: 376028-376055, mismatch: 1, identity: 0.964

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctgagccagtcagtttcaaca	Protospacer
*********.******************

42. spacer 1.1|381074|28|LS483383|CRT matches to position: 376124-376151, mismatch: 1, identity: 0.964

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctgagccagtcagtttcaaca	Protospacer
*********.******************

43. spacer 1.1|381074|28|LS483383|CRT matches to position: 378158-378185, mismatch: 1, identity: 0.964

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctgagccagtcagtttcaaca	Protospacer
*********.******************

44. spacer 1.1|381074|28|LS483383|CRT matches to position: 378866-378893, mismatch: 1, identity: 0.964

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagcctgagccagtcagtttcaaca	Protospacer
*********.******************

45. spacer 1.3|381170|28|LS483383|CRT matches to position: 377180-377207, mismatch: 1, identity: 0.964

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtctcagca	Protospacer
*************************.**

46. spacer 1.3|381170|28|LS483383|CRT matches to position: 377918-377945, mismatch: 1, identity: 0.964

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtctcagca	Protospacer
*************************.**

47. spacer 1.3|381170|28|LS483383|CRT matches to position: 379298-379325, mismatch: 1, identity: 0.964

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtctgtatcaaca	Protospacer
********************* ******

48. spacer 1.3|381170|28|LS483383|CRT matches to position: 380258-380285, mismatch: 1, identity: 0.964

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccatccagtctgtctcaaca	Protospacer
*********** ****************

49. spacer 1.4|381218|58|LS483383|CRT matches to position: 380690-380747, mismatch: 1, identity: 0.983

aatgagcttgagtcaatctgtctcattaagcacaagcgcctcagcgtcattgagcttg	CRISPR spacer
aatgagcttgagtcaatctgtctcattaagcacaagcgcctcagcgtcattgagcctg	Protospacer
*******************************************************.**

50. spacer 1.5|381296|28|LS483383|CRT matches to position: 379694-379721, mismatch: 1, identity: 0.964

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatctgcttcaagctcattgagcacc	Protospacer
****** *********************

51. spacer 1.5|381296|28|LS483383|CRT matches to position: 379970-379997, mismatch: 1, identity: 0.964

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatctgcttcaagctcattgagcacc	Protospacer
****** *********************

52. spacer 1.7|381392|28|LS483383|CRT matches to position: 377540-377567, mismatch: 1, identity: 0.964

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcttcagcgtcattgagcttg	Protospacer
*************************.**

53. spacer 1.7|381392|28|LS483383|CRT matches to position: 380480-380507, mismatch: 1, identity: 0.964

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcctcagcgtcattgagcctg	Protospacer
*********.******************

54. spacer 1.7|381392|28|LS483383|CRT matches to position: 380720-380747, mismatch: 1, identity: 0.964

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcctcagcgtcattgagcctg	Protospacer
*********.******************

55. spacer 1.8|381440|28|LS483383|CRT matches to position: 375242-375269, mismatch: 1, identity: 0.964

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcctg	Protospacer
*******.********************

56. spacer 1.8|381440|28|LS483383|CRT matches to position: 377852-377879, mismatch: 1, identity: 0.964

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcctcagcatcagtaagcctg	Protospacer
*********.******************

57. spacer 1.10|381536|28|LS483383|CRT matches to position: 375242-375269, mismatch: 1, identity: 0.964

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcctg	Protospacer
*******.********************

58. spacer 1.10|381536|28|LS483383|CRT matches to position: 377852-377879, mismatch: 1, identity: 0.964

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcctcagcatcagtaagcctg	Protospacer
*********.******************

59. spacer 1.11|381584|28|LS483383|CRT matches to position: 375626-375653, mismatch: 1, identity: 0.964

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcttg	Protospacer
*************************.**

60. spacer 1.11|381584|28|LS483383|CRT matches to position: 376346-376373, mismatch: 1, identity: 0.964

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcttg	Protospacer
*************************.**

61. spacer 1.11|381584|28|LS483383|CRT matches to position: 378800-378827, mismatch: 1, identity: 0.964

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagtaagcttg	Protospacer
*************************.**

62. spacer 1.12|381632|28|LS483383|CRT matches to position: 377588-377615, mismatch: 1, identity: 0.964

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
tgcaagtgcttcagcatcgttgagcttg	Protospacer
*** ************************

63. spacer 1.12|381632|28|LS483383|CRT matches to position: 377996-378023, mismatch: 1, identity: 0.964

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
tgcaagtgcttcagcatcgttgagcttg	Protospacer
*** ************************

64. spacer 1.12|381632|28|LS483383|CRT matches to position: 378566-378593, mismatch: 1, identity: 0.964

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
tgcaagtgcttcagcatcgttgagcttg	Protospacer
*** ************************

65. spacer 1.18|381944|28|LS483383|CRT matches to position: 376754-376781, mismatch: 1, identity: 0.964

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtctgtctcagtaagcaca	Protospacer
************ ***************

66. spacer 1.18|381944|28|LS483383|CRT matches to position: 377516-377543, mismatch: 1, identity: 0.964

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtcggtctcagtaagcaca	Protospacer
************.***************

67. spacer 1.21|382088|28|LS483383|CRT matches to position: 376226-376253, mismatch: 1, identity: 0.964

cttgagtcaatcagtttcaacaagtgca	CRISPR spacer
cttgagccaatcagtttcaacaagtgca	Protospacer
******.*********************

68. spacer 1.27|382376|28|LS483383|CRT matches to position: 376754-376781, mismatch: 1, identity: 0.964

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtctgtctcagtaagcaca	Protospacer
************ ***************

69. spacer 1.27|382376|28|LS483383|CRT matches to position: 377516-377543, mismatch: 1, identity: 0.964

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtcggtctcagtaagcaca	Protospacer
************.***************

70. spacer 1.29|382472|28|LS483383|CRT matches to position: 375458-375485, mismatch: 1, identity: 0.964

caccagccaatctgtatcagtaagcaca	CRISPR spacer
caccagccagtctgtatcagtaagcaca	Protospacer
*********.******************

71. spacer 1.29|382472|28|LS483383|CRT matches to position: 376610-376637, mismatch: 1, identity: 0.964

caccagccaatctgtatcagtaagcaca	CRISPR spacer
caccagccagtctgtatcagtaagcaca	Protospacer
*********.******************

72. spacer 1.29|382472|28|LS483383|CRT matches to position: 377042-377069, mismatch: 1, identity: 0.964

caccagccaatctgtatcagtaagcaca	CRISPR spacer
caccagccagtctgtatcagtaagcaca	Protospacer
*********.******************

73. spacer 1.29|382472|28|LS483383|CRT matches to position: 377468-377495, mismatch: 1, identity: 0.964

caccagccaatctgtatcagtaagcaca	CRISPR spacer
caccagccagtctgtatcagtaagcaca	Protospacer
*********.******************

74. spacer 1.31|382568|28|LS483383|CRT matches to position: 380090-380117, mismatch: 1, identity: 0.964

cttgagtcagtctgtctcagcaagcaca	CRISPR spacer
cttgagccagtctgtctcagcaagcaca	Protospacer
******.*********************

75. spacer 1.35|382760|28|LS483383|CRT matches to position: 376658-376685, mismatch: 1, identity: 0.964

cttgagccagtcagtctcagtaagtgaa	CRISPR spacer
cttgagccagtcagtctcagcaagtgaa	Protospacer
********************.*******

76. spacer 1.35|382760|28|LS483383|CRT matches to position: 377420-377447, mismatch: 1, identity: 0.964

cttgagccagtcagtctcagtaagtgaa	CRISPR spacer
cttgagccagtcagtctcagcaagtgaa	Protospacer
********************.*******

77. spacer 1.1|381074|28|LS483383|CRT matches to position: 379664-379691, mismatch: 2, identity: 0.929

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagccttagccagtcggtttcaaca	Protospacer
********* ********.*********

78. spacer 1.1|381074|28|LS483383|CRT matches to position: 379940-379967, mismatch: 2, identity: 0.929

agtaagcctaagccagtcagtttcaaca	CRISPR spacer
agtaagccttagccagtcggtttcaaca	Protospacer
********* ********.*********

79. spacer 1.2|381122|28|LS483383|CRT matches to position: 377180-377207, mismatch: 2, identity: 0.929

attgagcacaagtcagtctgtctcagca	CRISPR spacer
attgagcaccagccagtctgtctcagca	Protospacer
********* **.***************

80. spacer 1.2|381122|28|LS483383|CRT matches to position: 377918-377945, mismatch: 2, identity: 0.929

attgagcacaagtcagtctgtctcagca	CRISPR spacer
attgagcaccagccagtctgtctcagca	Protospacer
********* **.***************

81. spacer 1.3|381170|28|LS483383|CRT matches to position: 374732-374759, mismatch: 2, identity: 0.929

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtcagtttcaaca	Protospacer
****************** **.******

82. spacer 1.3|381170|28|LS483383|CRT matches to position: 376268-376295, mismatch: 2, identity: 0.929

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcgcaagccagtctgtctcaaca	Protospacer
*******.* ******************

83. spacer 1.3|381170|28|LS483383|CRT matches to position: 377366-377393, mismatch: 2, identity: 0.929

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtcagtctcagca	Protospacer
****************** ******.**

84. spacer 1.3|381170|28|LS483383|CRT matches to position: 378728-378755, mismatch: 2, identity: 0.929

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtcagtctcagca	Protospacer
****************** ******.**

85. spacer 1.3|381170|28|LS483383|CRT matches to position: 379010-379037, mismatch: 2, identity: 0.929

attgagcaccagccagtctgtctcaaca	CRISPR spacer
attgagcaccagccagtcagtctcagca	Protospacer
****************** ******.**

86. spacer 1.5|381296|28|LS483383|CRT matches to position: 376682-376709, mismatch: 2, identity: 0.929

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaacgtcattgagcacc	Protospacer
**************  ************

87. spacer 1.5|381296|28|LS483383|CRT matches to position: 377444-377471, mismatch: 2, identity: 0.929

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaacgtcattgagcacc	Protospacer
**************  ************

88. spacer 1.5|381296|28|LS483383|CRT matches to position: 380240-380267, mismatch: 2, identity: 0.929

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
tgaatcagcttcaacttcattgagcacc	Protospacer
************** .************

89. spacer 1.6|381344|28|LS483383|CRT matches to position: 375146-375173, mismatch: 2, identity: 0.929

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
cgcaagtgcttcagcgtccttgagcttg	Protospacer
**.*************** *********

90. spacer 1.6|381344|28|LS483383|CRT matches to position: 379232-379259, mismatch: 2, identity: 0.929

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
cgcaagtgcttcagcgtccttgagcttg	Protospacer
**.*************** *********

91. spacer 1.7|381392|28|LS483383|CRT matches to position: 375386-375413, mismatch: 2, identity: 0.929

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacgagcgcttcagcgtcattgagcttg	Protospacer
***.*********************.**

92. spacer 1.7|381392|28|LS483383|CRT matches to position: 375818-375845, mismatch: 2, identity: 0.929

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcttcagcgtcactaagcctg	Protospacer
*******************.*.******

93. spacer 1.7|381392|28|LS483383|CRT matches to position: 375962-375989, mismatch: 2, identity: 0.929

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcttcagcgtcaatgagcttg	Protospacer
******************* *****.**

94. spacer 1.7|381392|28|LS483383|CRT matches to position: 376058-376085, mismatch: 2, identity: 0.929

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcttcagcgtcaatgagcttg	Protospacer
******************* *****.**

95. spacer 1.7|381392|28|LS483383|CRT matches to position: 376778-376805, mismatch: 2, identity: 0.929

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgcttcagcgtcactaagcctg	Protospacer
*******************.*.******

96. spacer 1.8|381440|28|LS483383|CRT matches to position: 375818-375845, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcttcagcgtcactaagcctg	Protospacer
***************.*** ********

97. spacer 1.8|381440|28|LS483383|CRT matches to position: 376202-376229, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcttg	Protospacer
*******.*****************.**

98. spacer 1.8|381440|28|LS483383|CRT matches to position: 376778-376805, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcttcagcgtcactaagcctg	Protospacer
***************.*** ********

99. spacer 1.8|381440|28|LS483383|CRT matches to position: 379184-379211, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcttg	Protospacer
*******.*****************.**

100. spacer 1.8|381440|28|LS483383|CRT matches to position: 380114-380141, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcttg	Protospacer
*******.*****************.**

101. spacer 1.9|381488|28|LS483383|CRT matches to position: 375722-375749, mismatch: 2, identity: 0.929

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
cacaagcgcttcagcgtcattgagcgca	Protospacer
*********.*****.************

102. spacer 1.10|381536|28|LS483383|CRT matches to position: 375818-375845, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcttcagcgtcactaagcctg	Protospacer
***************.*** ********

103. spacer 1.10|381536|28|LS483383|CRT matches to position: 376202-376229, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcttg	Protospacer
*******.*****************.**

104. spacer 1.10|381536|28|LS483383|CRT matches to position: 376778-376805, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcgcttcagcgtcactaagcctg	Protospacer
***************.*** ********

105. spacer 1.10|381536|28|LS483383|CRT matches to position: 379184-379211, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcttg	Protospacer
*******.*****************.**

106. spacer 1.10|381536|28|LS483383|CRT matches to position: 380114-380141, mismatch: 2, identity: 0.929

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cacaagcacttcagcatcagtaagcttg	Protospacer
*******.*****************.**

107. spacer 1.11|381584|28|LS483383|CRT matches to position: 382832-382859, mismatch: 2, identity: 0.929

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgccagtgcttcagcctcagtaagcctg	Protospacer
*** *********** ************

108. spacer 1.18|381944|28|LS483383|CRT matches to position: 380090-380117, mismatch: 2, identity: 0.929

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtctgtctcagcaagcaca	Protospacer
************ *******.*******

109. spacer 1.19|381992|28|LS483383|CRT matches to position: 374738-374765, mismatch: 2, identity: 0.929

caccagccactcagtctcaacaagcgca	CRISPR spacer
caccagccagtcagtttcaacaagcgca	Protospacer
********* *****.************

110. spacer 1.19|381992|28|LS483383|CRT matches to position: 379994-380021, mismatch: 2, identity: 0.929

caccagccactcagtctcaacaagcgca	CRISPR spacer
caccagccagtctgtctcaacaagcgca	Protospacer
********* ** ***************

111. spacer 1.19|381992|28|LS483383|CRT matches to position: 380600-380627, mismatch: 2, identity: 0.929

caccagccactcagtctcaacaagcgca	CRISPR spacer
caccagccagtctgtctcaacaagcgca	Protospacer
********* ** ***************

112. spacer 1.19|381992|28|LS483383|CRT matches to position: 380888-380915, mismatch: 2, identity: 0.929

caccagccactcagtctcaacaagcgca	CRISPR spacer
caccagccagtctgtctcaacaagcgca	Protospacer
********* ** ***************

113. spacer 1.19|381992|28|LS483383|CRT matches to position: 381032-381059, mismatch: 2, identity: 0.929

caccagccactcagtctcaacaagcgca	CRISPR spacer
caccagccagtctgtctcaacaagcgca	Protospacer
********* ** ***************

114. spacer 1.21|382088|28|LS483383|CRT matches to position: 375650-375677, mismatch: 2, identity: 0.929

cttgagtcaatcagtttcaacaagtgca	CRISPR spacer
cttgagccaatccgtttcaacaagtgca	Protospacer
******.***** ***************

115. spacer 1.21|382088|28|LS483383|CRT matches to position: 376370-376397, mismatch: 2, identity: 0.929

cttgagtcaatcagtttcaacaagtgca	CRISPR spacer
cttgagtcaatccgtttcaacaagcgca	Protospacer
************ ***********.***

116. spacer 1.21|382088|28|LS483383|CRT matches to position: 379208-379235, mismatch: 2, identity: 0.929

cttgagtcaatcagtttcaacaagtgca	CRISPR spacer
cttgagtcaatccgtttcaacaagcgca	Protospacer
************ ***********.***

117. spacer 1.27|382376|28|LS483383|CRT matches to position: 380090-380117, mismatch: 2, identity: 0.929

cttgagccagtcagtctcagtaagcaca	CRISPR spacer
cttgagccagtctgtctcagcaagcaca	Protospacer
************ *******.*******

118. spacer 1.29|382472|28|LS483383|CRT matches to position: 376706-376733, mismatch: 2, identity: 0.929

caccagccaatctgtatcagtaagcaca	CRISPR spacer
caccagccagtctgtctcagtaagcaca	Protospacer
*********.***** ************

119. spacer 1.31|382568|28|LS483383|CRT matches to position: 376754-376781, mismatch: 2, identity: 0.929

cttgagtcagtctgtctcagcaagcaca	CRISPR spacer
cttgagccagtctgtctcagtaagcaca	Protospacer
******.*************.*******

120. spacer 1.31|382568|28|LS483383|CRT matches to position: 380312-380339, mismatch: 2, identity: 0.929

cttgagtcagtctgtctcagcaagcaca	CRISPR spacer
cttgagccagtctgtctcagcaagcgca	Protospacer
******.******************.**

121. spacer 1.32|382616|28|LS483383|CRT matches to position: 375122-375149, mismatch: 2, identity: 0.929

cctgagtcaatcagtttcaacaagcaca	CRISPR spacer
cctgagtcaatcagtctcaacaagcgca	Protospacer
***************.*********.**

122. spacer 1.32|382616|28|LS483383|CRT matches to position: 376034-376061, mismatch: 2, identity: 0.929

cctgagtcaatcagtttcaacaagcaca	CRISPR spacer
cctgagccagtcagtttcaacaagcaca	Protospacer
******.**.******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50650-50677	4	0.857
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51082-51109	4	0.857
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50650-50677	4	0.857
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51082-51109	4	0.857
LS483383_1	1.13\|381680\|28\|LS483383\|CRT	381680-381707	28	NC_019730	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.02, complete sequence	109372-109399	4	0.857
LS483383_1	1.25\|382280\|28\|LS483383\|CRT	382280-382307	28	NC_006466	Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence	151404-151431	4	0.857
LS483383_1	1.25\|382280\|28\|LS483383\|CRT	382280-382307	28	NZ_CP046332	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2	37624-37651	4	0.857
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	NC_009444	Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence	124758-124785	5	0.821
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP017294	Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence	24261-24288	5	0.821
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	MG271909	Synechococcus phage S-LBS1, complete genome	19932-19959	5	0.821
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	NC_048860	Microbacterium phage Arete, complete genome	8495-8522	5	0.821
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50650-50677	5	0.821
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51082-51109	5	0.821
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	NZ_CP044987	Deinococcus sp. AJ005 plasmid p96k, complete sequence	39880-39907	5	0.821
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	378332-378359	5	0.821
LS483383_1	1.19\|381992\|28\|LS483383\|CRT	381992-382019	28	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	127143-127170	5	0.821
LS483383_1	1.35\|382760\|28\|LS483383\|CRT	382760-382787	28	NZ_CP049116	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence	273427-273454	5	0.821
LS483383_2	2.1\|711012\|30\|LS483383\|PILER-CR	711012-711041	30	MT900487	Streptococcus phage 23TH, complete genome	5157-5186	5	0.833
LS483383_2	2.1\|711012\|30\|LS483383\|PILER-CR	711012-711041	30	NC_027396	Streptococcus phage SpSL1, complete genome	24083-24112	5	0.833
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	NZ_AP022320	Burkholderia sp. THE68 plasmid BTHE68_p2, complete sequence	217215-217242	6	0.786
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	NC_003064	Agrobacterium fabrum str. C58 plasmid At, complete sequence	208666-208693	6	0.786
LS483383_1	1.2\|381122\|28\|LS483383\|CRT	381122-381149	28	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	476892-476919	6	0.786
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	NZ_KY503036	Pseudomonas fluorescens strain PC20 plasmid pPHE20, complete sequence	17133-17160	6	0.786
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	NZ_CP010420	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50e, complete sequence	66404-66431	6	0.786
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	NZ_MH061179	Pseudomonas fluorescens strain P69 plasmid pPHE69, complete sequence	41159-41186	6	0.786
LS483383_1	1.6\|381344\|28\|LS483383\|CRT	381344-381371	28	NZ_MH061178	Pseudomonas thivervalensis strain P101 plasmid pPHE101, complete sequence	12403-12430	6	0.786
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP053542	Vibrio europaeus strain NPI-1 plasmid pVEu, complete sequence	185216-185243	6	0.786
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	165274-165301	6	0.786
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP009356	Vibrio tubiashii ATCC 19109 plasmid p251, complete sequence	2926-2953	6	0.786
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NC_009444	Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence	124758-124785	6	0.786
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	303804-303831	6	0.786
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	1039679-1039706	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	49618-49645	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50290-50317	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50746-50773	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51442-51469	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50338-50365	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50698-50725	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51754-51781	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP023967	Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence	50090-50117	6	0.786
LS483383_1	1.8\|381440\|28\|LS483383\|CRT	381440-381467	28	NZ_CP023967	Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence	50444-50471	6	0.786
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	303804-303831	6	0.786
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	NZ_CP042168	Burkholderia contaminans strain ZCC plasmid unnamed2, complete sequence	36853-36880	6	0.786
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	NZ_CP046611	Burkholderia contaminans strain XL73 plasmid unnamed2, complete sequence	50008-50035	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	49618-49645	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50290-50317	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50746-50773	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51442-51469	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50338-50365	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50698-50725	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51754-51781	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP023967	Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence	50090-50117	6	0.786
LS483383_1	1.10\|381536\|28\|LS483383\|CRT	381536-381563	28	NZ_CP023967	Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence	50444-50471	6	0.786
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	NC_009444	Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence	124758-124785	6	0.786
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2405830-2405857	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026783	Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence	72776-72803	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP054891	Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence	17040-17067	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	200926-200953	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	100923-100950	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	128547-128574	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	6097-6124	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	179064-179091	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	134827-134854	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	46504-46531	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP019696	Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence	136646-136673	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026775	Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence	169415-169442	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026781	Shigella dysenteriae strain 53-3937 plasmid unnamed	17771-17798	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026796	Shigella boydii strain ATCC BAA-1247 plasmid unnamed	36177-36204	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP045785	Shigella dysenteriae strain CFSAN029786 plasmid p1CFSAN029786, complete sequence	167540-167567	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	151831-151858	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP053752	Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence	70240-70267	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	192488-192515	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP010830	Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence	136649-136676	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	151683-151710	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026829	Shigella dysenteriae strain ATCC 12037 plasmid unnamed, complete sequence	153975-154002	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026841	Shigella dysenteriae strain ATCC 9753 plasmid unnamed, complete sequence	195859-195886	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026879	Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence	30669-30696	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026785	Shigella dysenteriae strain 80-547 plasmid unnamed	85153-85180	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP027028	Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence	126549-126576	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP026844	Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence	71166-71193	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP024469	Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence	121728-121755	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	101348-101375	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	59632-59659	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026099	Shigella flexneri strain FDAARGOS_74 plasmid unnamed	214776-214803	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026812	Shigella flexneri strain 64-5500 plasmid unnamed, complete sequence	131539-131566	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026833	Shigella dysenteriae strain ATCC 49346 plasmid unnamed, complete sequence	125107-125134	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026826	Shigella dysenteriae strain ATCC 12021 plasmid unnamed	43308-43335	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	206939-206966	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP012138	Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence	76140-76167	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP044160	Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence	91281-91308	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	155352-155379	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	154017-154044	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	151081-151108	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NC_007607	Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence	56828-56855	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	31436-31463	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	194773-194800	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP000039	Shigella sonnei Ss046 plasmid pSS_046, complete sequence	133106-133133	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	155778-155805	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	55390-55417	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	153553-153580	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	HE616529	Shigella sonnei 53G plasmid A, complete genome	138765-138792	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	138880-138907	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	CP023646	Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence	182048-182075	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	23136-23163	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP050866	Escherichia coli strain 8-3-Ti3 plasmid unnamed1, complete sequence	183801-183828	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP050863	Escherichia coli strain 8-3-DC15 plasmid unnamed1, complete sequence	183799-183826	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	119508-119535	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NC_010660	Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence	152968-152995	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP020343	Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence	76157-76184	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	172586-172613	6	0.786
LS483383_1	1.14\|381728\|28\|LS483383\|CRT	381728-381755	28	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	156690-156717	6	0.786
LS483383_2	2.2\|711079\|30\|LS483383\|PILER-CR	711079-711108	30	AP013361	Uncultured Mediterranean phage uvMED DNA, complete genome, group G10, isolate: uvMED-CGR-U-MedDCM-OCT-S34-C1	14674-14703	6	0.8
LS483383_1	1.5\|381296\|28\|LS483383\|CRT	381296-381323	28	MH697589	Microbacterium phage Neferthena, complete genome	31200-31227	7	0.75
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP022209	Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence	65832-65859	7	0.75
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NC_015383	Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence	62915-62942	7	0.75
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP009321	Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence	58059-58086	7	0.75
LS483383_1	1.7\|381392\|28\|LS483383\|CRT	381392-381419	28	NZ_CP022007	Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence	198503-198530	7	0.75
LS483383_1	1.9\|381488\|28\|LS483383\|CRT	381488-381515	28	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	196281-196308	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	58704-58731	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	97003-97030	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	66209-66236	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	66705-66732	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	5195-5222	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP010386	Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence	46044-46071	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NC_032102	Enterobacter cloacae strain G6809 plasmid pG6809-1, complete sequence	7237-7264	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	75583-75610	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	345-372	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	45162-45189	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	72371-72398	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	63964-63991	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	47590-47617	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	34731-34758	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	51793-51820	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	82246-82273	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	8982-9009	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	23088-23115	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	74971-74998	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	49618-49645	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50290-50317	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	50746-50773	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	51442-51469	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP027605	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence	43150-43177	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	95277-95304	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	2051-2078	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_AP014953	Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_2, complete sequence	8012-8039	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	82517-82544	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	60736-60763	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	63296-63323	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	5129-5156	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	97807-97834	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	97450-97477	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	35901-35928	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	52771-52798	7	0.75
LS483383_1	1.11\|381584\|28\|LS483383\|CRT	381584-381611	28	GU071103	Prochlorococcus phage P-SSM7, complete genome	110204-110231	7	0.75
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1114802-1114829	7	0.75
LS483383_1	1.12\|381632\|28\|LS483383\|CRT	381632-381659	28	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1270799-1270826	7	0.75
LS483383_1	1.17\|381896\|28\|LS483383\|CRT	381896-381923	28	NC_031280	Acinetobacter phage vB_AbaM_phiAbaA1, complete genome	20967-20994	7	0.75
LS483383_1	1.34\|382712\|28\|LS483383\|CRT	382712-382739	28	NC_031280	Acinetobacter phage vB_AbaM_phiAbaA1, complete genome	20967-20994	7	0.75

1. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 4, identity: 0.857

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagcgcg	Protospacer
*.****** **************** .*

2. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 4, identity: 0.857

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagcgcg	Protospacer
*.****** **************** .*

3. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 4, identity: 0.857

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagcgcg	Protospacer
*.****** **************** .*

4. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 4, identity: 0.857

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagcgcg	Protospacer
*.****** **************** .*

5. spacer 1.13|381680|28|LS483383|CRT matches to NC_019730 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.02, complete sequence) position: , mismatch: 4, identity: 0.857

tgccagtgcttcagcatcagtgagctta	CRISPR spacer
ttctaatgcttcagcatcagtgagcgta	Protospacer
* *.*.******************* **

6. spacer 1.25|382280|28|LS483383|CRT matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 4, identity: 0.857

cttaagccagtctgtatcagcaa-gcgta	CRISPR spacer
gtgaagccagtctgtttcagcaaggcgt-	Protospacer
 * ************ ******* ****

7. spacer 1.25|382280|28|LS483383|CRT matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 4, identity: 0.857

cttaagccagtctgtatcagcaa-gcgta	CRISPR spacer
gtgaagccagtctgtttcagcaaggcgt-	Protospacer
 * ************ ******* ****

8. spacer 1.6|381344|28|LS483383|CRT matches to NC_009444 (Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence) position: , mismatch: 5, identity: 0.821

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
ctcaagtgcttcagcgtcgttgagctgt	Protospacer
* .***************.*******

9. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP017294 (Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
cacaagcgctttcgcgtcattgatgatg	Protospacer
***********. **********   **

10. spacer 1.9|381488|28|LS483383|CRT matches to MG271909 (Synechococcus phage S-LBS1, complete genome) position: , mismatch: 5, identity: 0.821

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
gaggagcgcctcaggatgattgagcgca	Protospacer
 * .********** ** **********

11. spacer 1.9|381488|28|LS483383|CRT matches to NC_048860 (Microbacterium phage Arete, complete genome) position: , mismatch: 5, identity: 0.821

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
cacaagcgcctgatcatcattgactaca	Protospacer
*********** * ********* ..**

12. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 5, identity: 0.821

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagcgcg	Protospacer
.*****.* **************** .*

13. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 5, identity: 0.821

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagcgcg	Protospacer
.*****.* **************** .*

14. spacer 1.12|381632|28|LS483383|CRT matches to NZ_CP044987 (Deinococcus sp. AJ005 plasmid p96k, complete sequence) position: , mismatch: 5, identity: 0.821

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
ttcaagtgcttcagcatcgctgagctgt	Protospacer
* * ***************.******

15. spacer 1.19|381992|28|LS483383|CRT matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 5, identity: 0.821

caccagccactcagtctcaacaagcgca	CRISPR spacer
ctttagcaactcagtctcaagaagcgca	Protospacer
* ..*** ************ *******

16. spacer 1.19|381992|28|LS483383|CRT matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 5, identity: 0.821

caccagccactcagtctcaacaagcgca	CRISPR spacer
ctttagcaactcagtctcaagaagcgca	Protospacer
* ..*** ************ *******

17. spacer 1.35|382760|28|LS483383|CRT matches to NZ_CP049116 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

cttgagccagtcagtctcagtaagtgaa	CRISPR spacer
cattcgccagtcattttcagtaagtgaa	Protospacer
* *  ******** *.************

18. spacer 2.1|711012|30|LS483383|PILER-CR matches to MT900487 (Streptococcus phage 23TH, complete genome) position: , mismatch: 5, identity: 0.833

gtaggccaatgcagcttctgcaaacttctt	CRISPR spacer
atatttcaatgctgcttctgcaaacttctt	Protospacer
.**  .****** *****************

19. spacer 2.1|711012|30|LS483383|PILER-CR matches to NC_027396 (Streptococcus phage SpSL1, complete genome) position: , mismatch: 5, identity: 0.833

gtaggccaatgcagcttctgcaaacttctt	CRISPR spacer
atatttcaatgctgcttctgcaaacttctt	Protospacer
.**  .****** *****************

20. spacer 1.2|381122|28|LS483383|CRT matches to NZ_AP022320 (Burkholderia sp. THE68 plasmid BTHE68_p2, complete sequence) position: , mismatch: 6, identity: 0.786

attgagcacaagtcagtctgtctcagca	CRISPR spacer
accgagcacacgtcagtctgtctcaaac	Protospacer
*..******* **************.

21. spacer 1.2|381122|28|LS483383|CRT matches to NC_003064 (Agrobacterium fabrum str. C58 plasmid At, complete sequence) position: , mismatch: 6, identity: 0.786

attgagcacaagtcagtctgtctcagca	CRISPR spacer
ttgcagcacaaggcaggctgtctcagcg	Protospacer
 *  ******** *** **********.

22. spacer 1.2|381122|28|LS483383|CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 6, identity: 0.786

attgagcacaagtcagtctgtctcagca	CRISPR spacer
ttgcagcacaaggcaggctgtctcagcg	Protospacer
 *  ******** *** **********.

23. spacer 1.6|381344|28|LS483383|CRT matches to NZ_KY503036 (Pseudomonas fluorescens strain PC20 plasmid pPHE20, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
ttgaatagcttcatcgtcattgagcttg	Protospacer
.  **  ****** **************

24. spacer 1.6|381344|28|LS483383|CRT matches to NZ_CP010420 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50e, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
ccgctgttcttcagcgtcattgaccttg	Protospacer
*    ** *************** ****

25. spacer 1.6|381344|28|LS483383|CRT matches to NZ_MH061179 (Pseudomonas fluorescens strain P69 plasmid pPHE69, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
ttgaatagcttcatcgtcattgagcttg	Protospacer
.  **  ****** **************

26. spacer 1.6|381344|28|LS483383|CRT matches to NZ_MH061178 (Pseudomonas thivervalensis strain P101 plasmid pPHE101, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtgcttcagcgtcattgagcttg	CRISPR spacer
ttgaatagcttcatcgtcattgagcttg	Protospacer
.  **  ****** **************

27. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP053542 (Vibrio europaeus strain NPI-1 plasmid pVEu, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
ggcaagcgctttagcgtcattgaccgtt	Protospacer
 .*********.*********** * *

28. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gccaagcacttcagcggcattgagcagg	Protospacer
  *****.******** ********  *

29. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP009356 (Vibrio tubiashii ATCC 19109 plasmid p251, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
ggcaagcgctttagcgtcattgaccgtt	Protospacer
 .*********.*********** * *

30. spacer 1.7|381392|28|LS483383|CRT matches to NC_009444 (Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
ctcaagtgcttcagcgtcgttgagctgt	Protospacer
* ****.***********.******.

31. spacer 1.7|381392|28|LS483383|CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gacaagcgcctcagcgtcattgggaata	Protospacer
 ********.************.*  *.

32. spacer 1.7|381392|28|LS483383|CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gccaagcacttcagcggcattgagcagg	Protospacer
  *****.******** ********  *

33. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

34. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

35. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

36. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

37. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcaacatcagtaagcgca	Protospacer
*.****** ****.*********** ..

38. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcaacatcagtaagcgca	Protospacer
*.****** ****.*********** ..

39. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcaacatcagtaagcgca	Protospacer
*.****** ****.*********** ..

40. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP023967 (Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcgtcagtaagcgca	Protospacer
*.****** ******.********* ..

41. spacer 1.8|381440|28|LS483383|CRT matches to NZ_CP023967 (Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcgtcagtaagcgca	Protospacer
*.****** ******.********* ..

42. spacer 1.9|381488|28|LS483383|CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 6, identity: 0.786

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
gacaagcgcctcagcgtcattgggaata	Protospacer
 **************.******.* ..*

43. spacer 1.9|381488|28|LS483383|CRT matches to NZ_CP042168 (Burkholderia contaminans strain ZCC plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
gagaaacgcctcggcatcattgagcgac	Protospacer
 * **.******.*************

44. spacer 1.9|381488|28|LS483383|CRT matches to NZ_CP046611 (Burkholderia contaminans strain XL73 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
gagaaacgcctcggcatcattgagcgac	Protospacer
 * **.******.*************

45. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

46. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

47. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

48. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
*.****** ***************. ..

49. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcaacatcagtaagcgca	Protospacer
*.****** ****.*********** ..

50. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcaacatcagtaagcgca	Protospacer
*.****** ****.*********** ..

51. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcaacatcagtaagcgca	Protospacer
*.****** ****.*********** ..

52. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP023967 (Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcgtcagtaagcgca	Protospacer
*.****** ******.********* ..

53. spacer 1.10|381536|28|LS483383|CRT matches to NZ_CP023967 (Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cacaagcgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcgtcagtaagcgca	Protospacer
*.****** ******.********* ..

54. spacer 1.12|381632|28|LS483383|CRT matches to NC_009444 (Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence) position: , mismatch: 6, identity: 0.786

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
ctcaagtgcttcagcgtcgttgagctgt	Protospacer
. * ***********.**********

55. spacer 1.12|381632|28|LS483383|CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.786

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
ggagacagcttcagcaccgttgagcttg	Protospacer
 *  *  *********.***********

56. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

57. spacer 1.14|381728|28|LS483383|CRT matches to CP054891 (Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

58. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

59. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

60. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

61. spacer 1.14|381728|28|LS483383|CRT matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

62. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

63. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

64. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

65. spacer 1.14|381728|28|LS483383|CRT matches to CP019696 (Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

66. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

67. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026781 (Shigella dysenteriae strain 53-3937 plasmid unnamed) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

68. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026796 (Shigella boydii strain ATCC BAA-1247 plasmid unnamed) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

69. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP045785 (Shigella dysenteriae strain CFSAN029786 plasmid p1CFSAN029786, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

70. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

71. spacer 1.14|381728|28|LS483383|CRT matches to CP053752 (Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

72. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

73. spacer 1.14|381728|28|LS483383|CRT matches to CP010830 (Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

74. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

75. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026829 (Shigella dysenteriae strain ATCC 12037 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

76. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026841 (Shigella dysenteriae strain ATCC 9753 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

77. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026879 (Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

78. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

79. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP027028 (Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

80. spacer 1.14|381728|28|LS483383|CRT matches to CP026844 (Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

81. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

82. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

83. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

84. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026099 (Shigella flexneri strain FDAARGOS_74 plasmid unnamed) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

85. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026812 (Shigella flexneri strain 64-5500 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

86. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026833 (Shigella dysenteriae strain ATCC 49346 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

87. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026826 (Shigella dysenteriae strain ATCC 12021 plasmid unnamed) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

88. spacer 1.14|381728|28|LS483383|CRT matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

89. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP012138 (Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

90. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP044160 (Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

91. spacer 1.14|381728|28|LS483383|CRT matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

92. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

93. spacer 1.14|381728|28|LS483383|CRT matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

94. spacer 1.14|381728|28|LS483383|CRT matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

95. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

96. spacer 1.14|381728|28|LS483383|CRT matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

97. spacer 1.14|381728|28|LS483383|CRT matches to CP000039 (Shigella sonnei Ss046 plasmid pSS_046, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

98. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

99. spacer 1.14|381728|28|LS483383|CRT matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

100. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

101. spacer 1.14|381728|28|LS483383|CRT matches to HE616529 (Shigella sonnei 53G plasmid A, complete genome) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

102. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

103. spacer 1.14|381728|28|LS483383|CRT matches to CP023646 (Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

104. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

105. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP050866 (Escherichia coli strain 8-3-Ti3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

106. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP050863 (Escherichia coli strain 8-3-DC15 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

107. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

108. spacer 1.14|381728|28|LS483383|CRT matches to NC_010660 (Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

109. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP020343 (Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

110. spacer 1.14|381728|28|LS483383|CRT matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

111. spacer 1.14|381728|28|LS483383|CRT matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 6, identity: 0.786

cgtaagtacttcagcatcagtaagcctg	CRISPR spacer
gataagtacttcagcatcaataaatccg	Protospacer
 .*****************.***..*.*

112. spacer 2.2|711079|30|LS483383|PILER-CR matches to AP013361 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G10, isolate: uvMED-CGR-U-MedDCM-OCT-S34-C1) position: , mismatch: 6, identity: 0.8

tatttctcataactatttcatcaagaccca	CRISPR spacer
cgtcactgataacgatttcatcaagaccca	Protospacer
..*. ** ***** ****************

113. spacer 1.5|381296|28|LS483383|CRT matches to MH697589 (Microbacterium phage Neferthena, complete genome) position: , mismatch: 7, identity: 0.75

tgaatcagcttcaagctcattgagcacc	CRISPR spacer
gccgtcagcctcaagctcatcgagcaca	Protospacer
   .*****.**********.******

114. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP022209 (Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gggaagcgcttcaccgtcattgaggtcg	Protospacer
 . ********** ********** ..*

115. spacer 1.7|381392|28|LS483383|CRT matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 7, identity: 0.75

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gggaagcgcttcaccgtcattgaggtcg	Protospacer
 . ********** ********** ..*

116. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP009321 (Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.75

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gggaagcgcttcaccgtcattgaggtcg	Protospacer
 . ********** ********** ..*

117. spacer 1.7|381392|28|LS483383|CRT matches to NZ_CP022007 (Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence) position: , mismatch: 7, identity: 0.75

cacaagcgcttcagcgtcattgagcctg	CRISPR spacer
gggaagcgcttcaccgtcattgaggtcg	Protospacer
 . ********** ********** ..*

118. spacer 1.9|381488|28|LS483383|CRT matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 7, identity: 0.75

cacaagcgcctcagcatcattgagcgca	CRISPR spacer
ggtctgcacctcggcatcattgagcgca	Protospacer
 ..  **.****.***************

119. spacer 1.11|381584|28|LS483383|CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

120. spacer 1.11|381584|28|LS483383|CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

121. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

122. spacer 1.11|381584|28|LS483383|CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

123. spacer 1.11|381584|28|LS483383|CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

124. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP010386 (Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

125. spacer 1.11|381584|28|LS483383|CRT matches to NC_032102 (Enterobacter cloacae strain G6809 plasmid pG6809-1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

126. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

127. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

128. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

129. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

130. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

131. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

132. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

133. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

134. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

135. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

136. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

137. spacer 1.11|381584|28|LS483383|CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

138. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
.*****.* ***************. ..

139. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
.*****.* ***************. ..

140. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
.*****.* ***************. ..

141. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
cgcaagcgattcagcatcagtaagtgca	Protospacer
.*****.* ***************. ..

142. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP027605 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

143. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

144. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

145. spacer 1.11|381584|28|LS483383|CRT matches to NZ_AP014953 (Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

146. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

147. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

148. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

149. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

150. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

151. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

152. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

153. spacer 1.11|381584|28|LS483383|CRT matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
tgcaagtgcttcagcatcagctgccgct	Protospacer
********************. . * .

154. spacer 1.11|381584|28|LS483383|CRT matches to GU071103 (Prochlorococcus phage P-SSM7, complete genome) position: , mismatch: 7, identity: 0.75

tgcaagtgcttcagcatcagtaagcctg	CRISPR spacer
agcaagtgcttcagcatctgtagcacca	Protospacer
 ***************** ***.  *..

155. spacer 1.12|381632|28|LS483383|CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 7, identity: 0.75

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
ctccagtgcttcagcatccttgatcagc	Protospacer
. **************** **** *

156. spacer 1.12|381632|28|LS483383|CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 7, identity: 0.75

tgccagtgcttcagcatcgttgagcttg	CRISPR spacer
ctccagtgcttcagcatccttgaccagc	Protospacer
. **************** **** *

157. spacer 1.17|381896|28|LS483383|CRT matches to NC_031280 (Acinetobacter phage vB_AbaM_phiAbaA1, complete genome) position: , mismatch: 7, identity: 0.75

cctgagtcaatctgtctcagcaagtgcc	CRISPR spacer
gtttgtacaatctgtctcagctagtgcc	Protospacer
 .* .  ************** ******

158. spacer 1.34|382712|28|LS483383|CRT matches to NC_031280 (Acinetobacter phage vB_AbaM_phiAbaA1, complete genome) position: , mismatch: 7, identity: 0.75

cctgagtcaatctgtctcagcaagtgcc	CRISPR spacer
gtttgtacaatctgtctcagctagtgcc	Protospacer
 .* .  ************** ******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1008945 : 1018544

Streptococcus_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG32336.1\|1008945_1009323_-	penicillinase repressor	X5JAW5	Clostridium_phage	1.6e-12	35.0
SQG32337.1\|1009433_1009790_-	integral membrane protein	NA	NA	NA	NA
SQG32338.1\|1009981_1011298_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	6.7e-95	42.8
SQG32339.1\|1011408_1012377_+	thioredoxin-disulfide reductase	Q9JRK7	Streptococcus_phage	1.8e-49	75.0
SQG32340.1\|1012410_1013322_-	cytoplasmic protein	Q7AWZ3	Streptococcus_phage	1.0e-118	72.9
SQG32341.1\|1013318_1014296_-	transporter	A1IMD5	Streptococcus_phage	1.4e-153	82.2
SQG32342.1\|1014292_1015183_-	glmZ(sRNA)-inactivating NTPase	A0A0R8VB27	Thermobifida_phage	2.3e-06	29.8
SQG32343.1\|1015250_1015634_-	endoribonuclease L-PSP	NA	NA	NA	NA
SQG32344.1\|1015933_1016911_+	preQ1-regulated inosine-uridine nucleoside hydrolase	NA	NA	NA	NA
SQG32345.1\|1016915_1017482_+	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	NA	NA	NA	NA
SQG32346.1\|1017626_1018544_-	Aspartate carbamoyltransferase	A7RB08	Paramecium_bursaria_Chlorella_virus	4.8e-23	29.4

DBSCAN-SWA_2

1105118 : 1116491

Streptococcus_phage(60.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG32416.1\|1105118_1105925_-	Mobile element protein	A0A2I7SC85	Paenibacillus_phage	1.2e-65	48.9
SQG32417.1\|1105960_1106251_-\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	1.0e-19	53.8
SQG32418.1\|1106587_1107532_-	Uncharacterised protein	NA	NA	NA	NA
SQG32419.1\|1107628_1107877_-	Putative DNA recombinase	A0A1B0RXE6	Streptococcus_phage	1.9e-11	43.2
SQG32420.1\|1108377_1110129_-\|tRNA	methionyl-tRNA synthetase	A0A2I4R675	Erysipelothrix_phage	3.2e-153	52.0
SQG32421.1\|1110586_1110811_-	putative transcriptional regulator	A0A0A7RUJ5	Clostridium_phage	4.9e-06	43.8
SQG32422.1\|1110914_1112744_-	relaxase	A0A1B0RXG0	Streptococcus_phage	1.4e-05	35.9
SQG32423.1\|1112730_1113096_-	mobilisation protein	NA	NA	NA	NA
SQG32424.1\|1113100_1113457_-	Tn5252, Orf 10 protein	NA	NA	NA	NA
SQG32425.1\|1113747_1114038_-	Uncharacterised protein	Q6DMX6	Streptococcus_phage	4.1e-21	52.7
SQG32426.1\|1114027_1114393_-	Uncharacterised protein	A0A1B0RXA8	Streptococcus_phage	1.1e-20	44.6
SQG32427.1\|1114389_1115805_-	SOS responce UmuC protein	M1Q231	Streptococcus_phage	3.7e-200	72.4
SQG32428.1\|1115807_1116491_-	transcriptional regulator	E8ZDN4	Streptococcus_phage	1.1e-64	51.9

DBSCAN-SWA_3

1121808 : 1150104

Streptococcus_phage(89.47%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG32438.1\|1121808_1128027_-	SNF2 family protein	A0A248SL14	Klebsiella_phage	1.5e-216	30.4
SQG32439.1\|1128074_1128485_-	OmpA domain-containing protein	NA	NA	NA	NA
SQG32440.1\|1129360_1129675_+	Bacterial protein of uncharacterised function (DUF961)	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
SQG32441.1\|1129693_1130077_+	Bacterial protein of uncharacterised function (DUF961)	A0A1S5SF96	Streptococcus_phage	2.3e-64	100.0
SQG32442.1\|1130105_1131491_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
SQG32443.1\|1131668_1132874_+	transcriptional regulator protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
SQG32444.1\|1132916_1133138_+	FIG086557: Conjugation related protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
SQG32445.1\|1133254_1133752_+	Antirestriction protein	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
SQG32446.1\|1133840_1134233_+	TcpE family	A0A1S5SEX7	Streptococcus_phage	3.2e-69	100.0
SQG32447.1\|1134216_1136664_+	Type IV secretory pathway, VirB4 components	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
SQG32448.1\|1136732_1138844_+	Tn916 ORF15 signal peptide containing protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
SQG32449.1\|1138840_1139842_+	lipoprotein, NLP/P60 family	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
SQG32450.1\|1139856_1140774_+	putative conjugative transposon protein	A0A1S5SF22	Streptococcus_phage	1.0e-166	99.0
SQG32451.1\|1141150_1143070_+	tetracycline resistance protein TetM	A0A1S5SF82	Streptococcus_phage	0.0e+00	98.4
SQG32452.1\|1143415_1143769_-	anaerobic benzoate catabolism transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
SQG32453.1\|1144273_1144696_+	RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
SQG32454.1\|1144692_1144923_+	Helix-turn-helix domain	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
SQG32455.1\|1145383_1145587_+	Mobile element protein	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
SQG32456.1\|1145668_1146886_+	Mobile element protein	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
SQG32457.1\|1147290_1150104_-	CHAP domain containing protein	Q4Z9D9	Staphylococcus_phage	2.1e-08	40.4

DBSCAN-SWA_4

1536751 : 1546890

Streptococcus_phage(88.89%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG32818.1\|1536751_1537105_-	ArsC family transcription regulator	M1PLC0	Streptococcus_phage	4.2e-36	62.4
SQG32819.1\|1537204_1537507_-	putative YCII-related protein	NA	NA	NA	NA
SQG32820.1\|1537578_1538754_-	D-3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	3.8e-174	79.0
SQG32821.1\|1538766_1539858_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	1.9e-167	79.1
SQG32822.1\|1539997_1540864_-	tetrapyrrole methylase family protein	M1PLC5	Streptococcus_phage	2.1e-113	73.2
SQG32823.1\|1540866_1541184_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	7.6e-29	60.0
SQG32824.1\|1541193_1542096_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.4e-82	55.8
SQG32825.1\|1542092_1542731_-	thymidylate kinase	M1PSC7	Streptococcus_phage	7.8e-81	71.2
SQG32826.1\|1542911_1543799_+	YitT family protein	M1Q1P6	Streptococcus_phage	2.9e-86	54.9
SQG32827.1\|1543851_1544544_-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
SQG32828.1\|1544626_1544938_-	membrane protein	NA	NA	NA	NA
SQG32829.1\|1544950_1545502_-	MutT/nudix family protein	NA	NA	NA	NA
SQG32830.1\|1545510_1546890_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A2K9L4K9	Tupanvirus	1.4e-31	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483383

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection