CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483389	Streptococcus pyogenes strain NCTC10879 genome assembly, chromosome: 1	1 crisprs	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	0	1	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483389_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483389_1

569032-569130

TypeI

I-C

Consensus_repeat	Method
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	CRISPRCasFinder

1 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of LS483389_1

>merge|LS483389|1|569032-569130|CRISPRCasFinder
GTCTCACCCTTCATGGGTGAGTGGATTGAAATATCCGATTTTAACCCCATATTTTCTACGAGATAACCGTCTCACCCTTCATGGGTGAGTGGATTGAAA

>LS483389|1|1|569032-569130|CRISPRCasFinder
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	TATCCGATTTTAACCCCATATTTTCTACGAGATAACC
GTCTCACCCTTCATGGGTGAGTGGATTGAAA

Protein	Signature genes	Signature genes Name	Protein_function
LS483389.1\|SQG27895.1\|568589_568883_+\|hypothetical-cytosolic-protein	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
LS483389.1\|SQG27888.1\|560869_563272_+\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483389.1\|SQG27896.1\|569290_570001_+\|cytochrome-c-type-biogenesis-protein	unknown	unknown	gnl\|CDD\|223856
LS483389.1\|SQG27886.1\|557496_558060_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|379082
LS483389.1\|SQG27903.1\|576391_576865_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
LS483389.1\|SQG27893.1\|567553_568054_+\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483389.1\|SQG27889.1\|563404_564133_+\|CRISPR-associated-protein-cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
LS483389.1\|SQG27894.1\|568090_568579_+\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|187852
LS483389.1\|SQG27891.1\|566032_566881_+\|putative-cytoplasmic-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
LS483389.1\|SQG27897.1\|570013_570637_+\|disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|239264
LS483389.1\|SQG27900.1\|572610_574344_+\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483389.1\|SQG27899.1\|571873_572614_+\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483389.1\|SQG27902.1\|575509_576226_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483389.1\|SQG27887.1\|558061_560710_+\|valyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235582
LS483389.1\|SQG27898.1\|570679_571786_+\|bifunctional-methionine-sulfoxide-reductase-A/B	unknown	unknown	gnl\|CDD\|184456
LS483389.1\|SQG27905.1\|577960_579196_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
LS483389.1\|SQG27901.1\|574416_575496_+\|cytoplasmic-protein	unknown	unknown	gnl\|CDD\|225197
LS483389.1\|SQG27892.1\|566882_567557_+\|RecB-family-exonuclease	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
LS483389.1\|SQG27890.1\|564132_566028_+\|CRISPR-associated-protein,-Csd1-family	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
LS483389.1\|SQG27904.1\|577006_577687_+\|Fumarate-and-nitrate-reduction-regulatory-protein	unknown	unknown	gnl\|CDD\|223736

Protein	Function_ID	Function_description	E-value
LS483389.1\|SQG27895.1\|568589_568883_+\|hypothetical-cytosolic-protein	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
LS483389.1\|SQG27888.1\|560869_563272_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.52007e-157
LS483389.1\|SQG27896.1\|569290_570001_+\|cytochrome-c-type-biogenesis-protein	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.97047e-42
LS483389.1\|SQG27886.1\|557496_558060_+\|shikimate-kinase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00400512
LS483389.1\|SQG27903.1\|576391_576865_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.23847e-66
LS483389.1\|SQG27893.1\|567553_568054_+\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	2.55655e-79
LS483389.1\|SQG27889.1\|563404_564133_+\|CRISPR-associated-protein-cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.32713e-117
LS483389.1\|SQG27894.1\|568090_568579_+\|DNA-polymerase	gnl\|CDD\|187852	cd09721, Cas1_I-C, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.47084e-102
LS483389.1\|SQG27891.1\|566032_566881_+\|putative-cytoplasmic-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	1.87305e-158
LS483389.1\|SQG27897.1\|570013_570637_+\|disulfide-interchange-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.89498e-35
LS483389.1\|SQG27900.1\|572610_574344_+\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	7.98697e-65
LS483389.1\|SQG27899.1\|571873_572614_+\|two-component-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.39575e-83
LS483389.1\|SQG27902.1\|575509_576226_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	8.83652e-106
LS483389.1\|SQG27887.1\|558061_560710_+\|valyl-tRNA-synthetase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
LS483389.1\|SQG27898.1\|570679_571786_+\|bifunctional-methionine-sulfoxide-reductase-A/B	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	3.04644e-163
LS483389.1\|SQG27905.1\|577960_579196_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
LS483389.1\|SQG27901.1\|574416_575496_+\|cytoplasmic-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.18444e-35
LS483389.1\|SQG27892.1\|566882_567557_+\|RecB-family-exonuclease	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	3.84911e-42
LS483389.1\|SQG27890.1\|564132_566028_+\|CRISPR-associated-protein,-Csd1-family	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
LS483389.1\|SQG27904.1\|577006_577687_+\|Fumarate-and-nitrate-reduction-regulatory-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40

>LS483389.1|SQG27895.1|568589_568883_+|hypothetical-cytosolic-protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>LS483389.1|SQG27894.1|568090_568579_+|DNA-polymerase
MLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>LS483389.1|SQG27893.1|567553_568054_+|DNA-polymerase
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEG
>LS483389.1|SQG27892.1|566882_567557_+|RecB-family-exonuclease
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKEKRKDLLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHDVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>LS483389.1|SQG27891.1|566032_566881_+|putative-cytoplasmic-protein
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKADALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGHSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSMEEKSTYDAYQIHLNQEKLAKYEAKGLTVEILEGL
>LS483389.1|SQG27890.1|564132_566028_+|CRISPR-associated-protein,-Csd1-family
MDFFTSLLKTYEKAELADLVDHQKRSNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQTQYDSFHKQLNNWIDYCEEGDVKKFLTFVQQFILKPEFLTLILDSLIGPDYQHNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEAKRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMLKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>LS483389.1|SQG27889.1|563404_564133_+|CRISPR-associated-protein-cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>LS483389.1|SQG27888.1|560869_563272_+|CRISPR-associated-helicase-Cas3
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIALCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEERQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSSIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVSYGEAEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLLDATKSFLNGQVLVLTSEYYDTERGVKYDSANFYF
>LS483389.1|SQG27887.1|558061_560710_+|valyl-tRNA-synthetase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKLITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>LS483389.1|SQG27886.1|557496_558060_+|shikimate-kinase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTQLTAAETAQLIIQKMTHIKEN
>LS483389.1|SQG27896.1|569290_570001_+|cytochrome-c-type-biogenesis-protein
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LS483389.1|SQG27897.1|570013_570637_+|disulfide-interchange-protein
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LS483389.1|SQG27898.1|570679_571786_+|bifunctional-methionine-sulfoxide-reductase-A/B
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>LS483389.1|SQG27899.1|571873_572614_+|two-component-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKEHAPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQKLVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>LS483389.1|SQG27900.1|572610_574344_+|two-component-sensor-kinase
MKRYPLLVQLISYVFVIVIALITMLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFSFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAIADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLTLPKMHELMADDTQENE
>LS483389.1|SQG27901.1|574416_575496_+|cytoplasmic-protein
MSLASDYFSRQTPIVEKLMAYGFEKRNNGYFYNERFMEEEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVEGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKAFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETNIPNEGYRKNPNIDKLMRLRKRQQYKDGLLSFDLMKKHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>LS483389.1|SQG27902.1|575509_576226_+|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALDFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>LS483389.1|SQG27903.1|576391_576865_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATICGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>LS483389.1|SQG27904.1|577006_577687_+|Fumarate-and-nitrate-reduction-regulatory-protein
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>LS483389.1|SQG27905.1|577960_579196_+|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448792	Streptococcus phage Javan521, complete genome	12481-12517	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	NC_009018	Streptococcus phage phi3396, complete genome	10291-10327	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448679	Streptococcus phage Javan137, complete genome	10676-10712	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	NC_004584	Streptococcus prophage 315.1, complete genome	12076-12112	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448682	Streptococcus phage Javan143, complete genome	12673-12709	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448770	Streptococcus phage Javan477, complete genome	12481-12517	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448978	Streptococcus phage Javan532, complete genome	11971-12007	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448680	Streptococcus phage Javan139, complete genome	11361-11397	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448785	Streptococcus phage Javan507, complete genome	11971-12007	1	0.973
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448769	Streptococcus phage Javan471, complete genome	9781-9817	4	0.892
LS483389_1	1.1\|569063\|37\|LS483389\|CRISPRCasFinder	569063-569099	37	MK448684	Streptococcus phage Javan151, complete genome	9781-9817	4	0.892

1. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

2. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

3. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

4. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

5. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

6. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

7. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

8. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

9. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.973

tatccgattttaaccccatattttctacgagataacc	CRISPR spacer
catccgattttaaccccatattttctacgagataacc	Protospacer
.************************************

10. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 4, identity: 0.892

tatccgattttaaccccatattttctacgagataacc-	CRISPR spacer
catccgattttaaccccatattttctacgtg-tagcca	Protospacer
.**************************** * **.**

11. spacer 1.1|569063|37|LS483389|CRISPRCasFinder matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 4, identity: 0.892

tatccgattttaaccccatattttctacgagataacc-	CRISPR spacer
catccgattttaaccccatattttctacgtg-tagcca	Protospacer
.**************************** * **.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

30273 : 42634

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG27412.1\|30273_34047_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.9e-40	27.0
SQG27413.1\|34207_35662_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.7e-54	32.3
SQG27414.1\|35689_36712_+	phosphoribosylaminoimidazole synthetase	R9TMC7	Synechococcus_phage	4.0e-63	41.8
SQG27415.1\|36879_37434_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.8e-25	35.6
SQG27416.1\|37617_39165_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	3.4e-45	52.4
SQG27417.1\|39222_40347_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQG27418.1\|40599_41865_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQG27419.1\|42022_42634_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	4.0e-18	42.3

DBSCAN-SWA_2

627392 : 707120

Streptococcus_phage(59.68%)

protease,tail,terminase,head,tRNA,integrase

attL 706194:706212|attR 707506:707524

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG27951.1\|627392_628232_+	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7
SQG27952.1\|628206_629067_+	GDSL family lipase	NA	NA	NA	NA
SQG27953.1\|629044_629632_+	membrane protein	NA	NA	NA	NA
SQG27954.1\|629730_630006_+	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
SQG27955.1\|630094_631237_-\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
SQG27956.1\|631360_631879_-	HIRAN domain protein	E8ZDN5	Streptococcus_phage	1.6e-31	45.9
SQG27957.1\|631890_632646_-	Cro/CI family transcriptional regulator	A0A1S5S8S8	Streptococcus_phage	2.8e-77	60.8
SQG27958.1\|632847_633060_+	helix-turn-helix family protein	A0A1X9I583	Streptococcus_phage	1.1e-10	56.7
SQG27959.1\|633100_633232_+	Uncharacterised protein	NA	NA	NA	NA
SQG27960.1\|633329_633641_+	excisionase	A0A1S5SA25	Streptococcus_phage	5.3e-43	77.7
SQG27961.1\|633642_633828_+	phage protein	Q938N3	Temperate_phage	1.3e-20	83.6
SQG27962.1\|634331_634718_+	phage DNA replication protein	Q938N2	Temperate_phage	8.1e-25	51.9
SQG27963.1\|634698_634932_+	phage protein	Q938N1	Temperate_phage	2.8e-36	96.1
SQG27964.1\|634928_635069_+	phage protein	A0A1X9I6Y1	Streptococcus_phage	3.4e-05	54.5
SQG27965.1\|635077_635284_+	phage protein	NA	NA	NA	NA
SQG27966.1\|635339_635669_+	phage protein	J7KGX3	Streptococcus_phage	7.1e-46	84.4
SQG27967.1\|635671_636598_+	recombinase, phage RecT family protein	M1NRN6	Streptococcus_phage	1.2e-90	71.8
SQG27968.1\|636594_636795_+	phage protein	NA	NA	NA	NA
SQG27969.1\|636787_637585_+	phage protein	J7KGZ1	Streptococcus_phage	1.3e-130	83.8
SQG27970.1\|637706_637799_+	phage protein	A0A1S5SCN4	Streptococcus_phage	3.7e-05	70.0
SQG27971.1\|637949_638345_+	phage protein	A8ATL9	Listeria_phage	1.4e-19	52.3
SQG27972.1\|638341_638776_+	PcfJ	A0A0H4U075	Erysipelothrix_phage	1.9e-30	49.7
SQG27973.1\|638854_639688_+	PcfJ	A8ATM0	Listeria_phage	1.9e-79	52.4
SQG27974.1\|639698_640031_+	phage protein	M1NS23	Streptococcus_phage	8.8e-36	67.0
SQG27975.1\|640027_640540_+	lactococcus phage M3 family protein	M1PFM2	Streptococcus_phage	1.7e-78	85.9
SQG27976.1\|640575_640893_+	phage protein	A1EAD7	Streptococcus_phage	9.0e-30	71.4
SQG27977.1\|640889_641045_+	phage protein	NA	NA	NA	NA
SQG27978.1\|641041_641293_+	phage protein	M1PF60	Streptococcus_phage	1.6e-18	59.0
SQG27979.1\|641368_641788_+	phage protein	A0A1X9I5B5	Streptococcus_phage	6.7e-57	79.9
SQG27980.1\|642387_642744_+	phage protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
SQG27981.1\|642740_644009_+	structural phage protein	M1PFL4	Streptococcus_phage	2.2e-188	75.6
SQG27982.1\|644001_645495_+	phage protein	M1Q184	Streptococcus_phage	2.0e-87	55.0
SQG27983.1\|645500_645725_+	phage protein	NA	NA	NA	NA
SQG27984.1\|645776_646043_+	secreted phage protein	Q938K9	Temperate_phage	1.5e-38	100.0
SQG27985.1\|646362_647778_+\|terminase	phage terminase	A0A0B5A091	Streptococcus_phage	2.0e-214	74.6
SQG27986.1\|647857_648319_+	phage protein	M1Q1L0	Streptococcus_phage	4.5e-38	53.2
SQG27987.1\|648343_649255_+\|head	phage, major head protein	M1PFL0	Streptococcus_phage	2.2e-113	67.0
SQG27988.1\|649254_649455_+	phage protein	NA	NA	NA	NA
SQG27989.1\|649464_649887_+	phage Gp19/Gp15/Gp42 family protein	A0A0B5A2F6	Streptococcus_phage	8.2e-47	67.2
SQG27990.1\|649846_650185_+	phage protein	A0A0B5A086	Streptococcus_phage	8.1e-45	75.0
SQG27991.1\|650177_650414_+	phage protein	A0A1P8BMT2	Lactococcus_phage	2.5e-21	66.7
SQG27992.1\|650414_650750_+	phage protein	A0A1P8BMR5	Lactococcus_phage	1.7e-34	64.9
SQG27993.1\|650761_651340_+\|tail	Major tail protein	A0A1X9I5X2	Streptococcus_phage	2.9e-58	62.9
SQG27994.1\|651350_651614_+	phage protein	A0A0B5A2F3	Streptococcus_phage	1.7e-18	54.7
SQG27995.1\|651628_652000_+	phage protein	M1PL84	Streptococcus_phage	1.2e-33	59.2
SQG27996.1\|651999_654357_+\|tail	minor tail protein GP26	M1NRG5	Streptococcus_phage	2.6e-134	50.3
SQG27997.1\|654353_655049_+	phage protein	A0A1B1P761	Bacillus_phage	4.7e-07	32.2
SQG27998.1\|655045_657007_+	phage endopeptidase	M1PKG3	Streptococcus_phage	1.4e-96	49.0
SQG27999.1\|657003_658119_+	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	4.8e-110	66.6
SQG28000.1\|658133_659915_+	gp58-like family protein	Q938J9	Temperate_phage	1.5e-65	40.2
SQG28001.1\|659923_660352_+	phage protein	Q938J8	Temperate_phage	3.7e-63	87.9
SQG28002.1\|660354_660987_+	phage protein	Q938J7	Temperate_phage	4.0e-45	50.5
SQG28003.1\|660998_661271_+	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQG28004.1\|661267_661495_+	phage protein	A7J2B3	Streptococcus_phage	2.0e-31	100.0
SQG28005.1\|661503_661620_+	phage membrane protein	A7J2B4	Streptococcus_phage	7.0e-09	97.1
SQG28006.1\|661613_662831_+	N-acetylmuramoyl-L-alanine amidase	A0A1P8VVM5	Streptococcus_phage	1.1e-163	60.1
SQG28007.1\|662899_663607_-	exotoxin type C	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1
SQG28008.1\|663717_664476_-	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA
SQG28009.1\|664715_664898_+	paratox	A3F673	Streptococcus_phage	1.7e-20	80.0
SQG28010.1\|665438_667301_+	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	5.4e-90	33.8
SQG28011.1\|667600_668536_-	dihydroorotate dehydrogenase 1A	A0A1V0SH91	Hokovirus	4.6e-66	45.1
SQG28012.1\|668774_669470_+	phosphoglyceromutase	NA	NA	NA	NA
SQG28013.1\|669576_670098_+	3H domain-containing protein	NA	NA	NA	NA
SQG28014.1\|670258_670801_+	membrane protein	NA	NA	NA	NA
SQG28015.1\|670924_671704_+	formate transporter	NA	NA	NA	NA
SQG28016.1\|672501_673098_+	recombination protein	NA	NA	NA	NA
SQG28017.1\|673198_674245_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
SQG28018.1\|674443_675811_+	UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase	NA	NA	NA	NA
SQG28019.1\|675914_676610_+	integral membrane family protein	NA	NA	NA	NA
SQG28020.1\|676857_678402_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.1e-35	29.1
SQG28021.1\|678708_680328_+	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
SQG28022.1\|680454_682455_+	Kup system potassium uptake protein	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	5.8e-66	34.0
SQG28023.1\|682478_682757_-	GIY-YIG catalytic domain-containing protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
SQG28024.1\|682746_683601_-	methyltransferase	NA	NA	NA	NA
SQG28025.1\|683640_684381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQG28026.1\|684580_685243_+	comE operon 1 domain-containing protein	NA	NA	NA	NA
SQG28027.1\|685223_687467_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.8e-55	59.2
SQG28028.1\|687537_688578_+	DNA polymerase III subunit delta	NA	NA	NA	NA
SQG28029.1\|688674_689280_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
SQG28030.1\|689446_689680_+	beta-lactamase	NA	NA	NA	NA
SQG28031.1\|689904_690495_+	S11 family peptidase	NA	NA	NA	NA
SQG28032.1\|690608_691796_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQG28033.1\|691835_692864_-\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQG28034.1\|693065_693770_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQG28035.1\|693888_694605_+	16S pseudouridylate synthetase	NA	NA	NA	NA
SQG28036.1\|694899_695862_+	competence CoiA-like family protein	NA	NA	NA	NA
SQG28037.1\|695874_697680_+	oligoendopeptidase F	NA	NA	NA	NA
SQG28038.1\|698055_699252_+	major facilitator superfamily protein	NA	NA	NA	NA
SQG28039.1\|699353_700025_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	8.3e-09	27.2
SQG28040.1\|700087_701143_+	foldase protein prsA 1	NA	NA	NA	NA
SQG28041.1\|701529_704148_+\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	5.1e-62	33.9
SQG28042.1\|704508_704724_+	XRE family transcriptional regulator	NA	NA	NA	NA
SQG28043.1\|704720_705482_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQG28044.1\|705500_706196_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
706194:706212	attL	NA	NA	NA	NA
SQG28045.1\|706289_706661_-\|integrase	integrase core domain protein	U5P429	Shigella_phage	4.1e-18	39.2
SQG28046.1\|706664_707120_-\|integrase	integrase core domain protein	U5P429	Shigella_phage	1.6e-16	35.5
707506:707524	attR	NA	NA	NA	NA

DBSCAN-SWA_3

738921 : 771661

Streptococcus_phi-m46.1-like_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28074.1\|738921_740280_+\|tRNA	tRNA (uracil-5-)-methyltransferase	F5CA72	Streptococcus_phi-m46.1-like_phage	2.7e-256	99.3
SQG28075.1\|740697_741027_+	phosphorylase superfamily protein	F5CA76	Streptococcus_phi-m46.1-like_phage	3.1e-41	83.8
SQG28076.1\|740969_741209_+	phosphorylase Pnp/Udp family protein	F5CA76	Streptococcus_phi-m46.1-like_phage	2.2e-36	94.9
SQG28077.1\|741293_741695_+	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA
SQG28078.1\|741799_743284_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQG28079.1\|743658_744879_+	sugar (and other) transporter family protein	NA	NA	NA	NA
SQG28080.1\|744998_745364_-	thioesterase superfamily protein	NA	NA	NA	NA
SQG28081.1\|745478_746210_+	16S pseudouridylate synthase	NA	NA	NA	NA
SQG28082.1\|746258_747065_-\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	2.4e-63	49.6
SQG28083.1\|747085_747601_-\|transposase	transposase	NA	NA	NA	NA
SQG28084.1\|747842_747971_+	membrane protein	NA	NA	NA	NA
SQG28085.1\|748027_749341_+	GTPase ObgE	NA	NA	NA	NA
SQG28086.1\|749409_749568_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQG28087.1\|749572_750268_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA
SQG28088.1\|750492_751473_+	beta-glucosidase	NA	NA	NA	NA
SQG28089.1\|751483_751894_+	beta-glucosidase	NA	NA	NA	NA
SQG28090.1\|751902_752997_+	outer surface protein	NA	NA	NA	NA
SQG28091.1\|753102_755097_+	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA
SQG28092.1\|755119_755431_+	PTS system cellobiose-specific component IIB	NA	NA	NA	NA
SQG28093.1\|755433_755769_+	PTS system cellobiose-specific transporter subunit IIA	NA	NA	NA	NA
SQG28094.1\|755765_756215_+	Domain of uncharacterised function (DUF3284)	NA	NA	NA	NA
SQG28095.1\|756387_757767_+	PTS system cellobiose-specific transporter subunit IIC	NA	NA	NA	NA
SQG28096.1\|757763_757916_+	Uncharacterised protein	NA	NA	NA	NA
SQG28097.1\|758182_758680_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	8.7e-72	89.9
SQG28098.1\|758660_759386_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.8e-129	92.5
SQG28099.1\|759543_760284_-	glutamine transport ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	1.2e-35	42.1
SQG28100.1\|760283_762458_-	glutamine-binding protein/glutamine transpor tsystem permease protein	NA	NA	NA	NA
SQG28101.1\|762650_764642_+	excinuclease ABC subunit B	NA	NA	NA	NA
SQG28102.1\|764905_765049_+	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA
SQG28103.1\|765060_766599_+	D-alanine--poly(phosphoribitol) ligase subunit 1	A0A2K9KZV5	Tupanvirus	6.5e-41	28.2
SQG28104.1\|766595_767852_+	Protein dltB	NA	NA	NA	NA
SQG28105.1\|767869_768109_+	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA
SQG28106.1\|768101_769352_+	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA
SQG28107.1\|769382_770366_+	alpha/beta fold family hydrolase	NA	NA	NA	NA
SQG28108.1\|770880_771468_-\|transposase	truncated transposase	Q9MBM9	Staphylococcus_prophage	1.4e-28	40.2
SQG28109.1\|771409_771661_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

778464 : 832376

Streptococcus_phage(58.33%)

protease,tail,terminase,holin,portal,integrase

attL 781830:781889|attR 825960:826055

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28115.1\|778464_780729_+	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
SQG28116.1\|780984_781605_-	phage protein	NA	NA	NA	NA
781830:781889	attL	NA	NA	NA	NA
SQG28117.1\|781967_783056_-\|integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	6.1e-203	99.2
SQG28118.1\|783175_783481_-	phage membrane protein	NA	NA	NA	NA
SQG28119.1\|783490_784279_-	Phage transcriptional repressor	A0A1S5SD15	Streptococcus_phage	2.9e-85	62.6
SQG28120.1\|784453_784600_+	Uncharacterised protein	NA	NA	NA	NA
SQG28121.1\|784596_785079_-	Uncharacterised protein	NA	NA	NA	NA
SQG28122.1\|785152_785392_+	Cro/CI family phage transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	3.1e-35	97.5
SQG28123.1\|785403_785667_+	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	3.6e-40	98.9
SQG28124.1\|785703_786000_+	phage protein	A0A097PAT8	Streptococcus_pyogenes_phage	2.1e-49	100.0
SQG28125.1\|785996_786134_+	phage protein	A0A1P8VVR9	Streptococcus_phage	5.4e-16	91.1
SQG28126.1\|786149_786464_+	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	1.2e-50	95.2
SQG28127.1\|786692_787175_+	phage protein	A0A1P8VVS5	Streptococcus_phage	7.9e-78	98.8
SQG28128.1\|787175_787856_+	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQG28129.1\|787957_789187_+	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	1.3e-236	99.8
SQG28130.1\|789202_789661_+	phage protein	A0A1P8VVN0	Streptococcus_phage	3.8e-82	100.0
SQG28131.1\|789672_790476_+	phage protein	A0A1P8VVM6	Streptococcus_phage	1.5e-150	97.4
SQG28132.1\|790465_791941_+	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.0e-249	87.1
SQG28133.1\|792135_792510_+	phage protein	A0A2H4JHE6	uncultured_Caudovirales_phage	8.2e-14	51.7
SQG28134.1\|792544_792865_+	phage protein	A0A1P8VVL5	Streptococcus_phage	5.5e-51	94.3
SQG28135.1\|792848_793205_+	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	4.6e-59	96.6
SQG28136.1\|793201_793453_+	phage protein	A0A1P8VVV4	Streptococcus_phage	1.6e-42	98.8
SQG28137.1\|793446_793731_+	phage protein	A0A1P8VVP5	Streptococcus_phage	2.7e-49	97.9
SQG28138.1\|793727_794141_+	phage protein	Q938M1	Temperate_phage	2.4e-35	63.8
SQG28139.1\|794137_794422_+	phage protein	A3F628	Streptococcus_phage	8.6e-40	91.5
SQG28140.1\|794425_794911_+	DNA N-4 cytosine methyltransferase M.NgoMXV	A0A097PAU8	Streptococcus_pyogenes_phage	4.6e-94	98.8
SQG28141.1\|794914_795142_+	phage protein	A3F630	Streptococcus_phage	1.9e-26	76.0
SQG28142.1\|795239_795641_+	Uncharacterised protein	NA	NA	NA	NA
SQG28143.1\|795640_796276_+	phage protein	L0P368	Streptococcus_phage	2.5e-87	68.4
SQG28144.1\|796548_796989_+	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	5.0e-79	100.0
SQG28145.1\|797760_798675_+	phage protein	NA	NA	NA	NA
SQG28146.1\|798693_799155_+	Uncharacterised protein	NA	NA	NA	NA
SQG28147.1\|799292_799670_-	phage protein	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
SQG28148.1\|799721_799907_-	phage protein	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
SQG28149.1\|800005_800146_+	Uncharacterised protein	NA	NA	NA	NA
SQG28150.1\|800142_800484_+	Phage endonuclease	J7KH36	Streptococcus_phage	9.6e-54	89.8
SQG28151.1\|800651_801119_+\|terminase	phage terminase, small subunit	J7KC46	Streptococcus_phage	3.9e-82	98.7
SQG28152.1\|801133_802888_+\|terminase	phage terminase, large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.1
SQG28153.1\|802884_803055_+	phage protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
SQG28154.1\|803047_803272_+	phage protein	Q938K9	Temperate_phage	3.6e-17	61.4
SQG28155.1\|803305_804526_+\|portal	phage portal protein	J7KDU3	Streptococcus_phage	5.8e-186	81.9
SQG28156.1\|804503_805169_+\|protease	phage ClpP protease	M1Q115	Streptococcus_phage	5.6e-90	77.2
SQG28157.1\|805193_806378_+	phage protein	J7KJ82	Streptococcus_phage	1.5e-162	76.6
SQG28158.1\|806522_806825_+	phage protein	J7KC36	Streptococcus_phage	3.0e-43	88.8
SQG28159.1\|806821_807169_+	phage protein	J7KJ42	Streptococcus_phage	2.6e-46	80.9
SQG28160.1\|807165_807543_+	phage protein	J7KDM3	Streptococcus_phage	1.5e-47	76.0
SQG28161.1\|807539_807965_+	phage protein	J7KBZ9	Streptococcus_phage	7.2e-67	84.4
SQG28162.1\|807980_808589_+\|tail	major tail protein	J7KKC8	Streptococcus_phage	6.7e-74	71.9
SQG28163.1\|808641_808968_+	phage protein	J7KK85	Streptococcus_phage	8.3e-39	75.0
SQG28164.1\|809177_813101_+\|tail	phage tail protein	J7KDT4	Streptococcus_phage	1.9e-238	48.5
SQG28165.1\|813100_813808_+	phage protein	Q938K2	Temperate_phage	1.1e-91	69.8
SQG28166.1\|813804_815952_+	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	93.1
SQG28167.1\|815951_817064_+	phage hyaluronidase	A7J2A8	Streptococcus_phage	8.4e-123	73.3
SQG28168.1\|817073_819089_+	Phage infection protein	Q938J9	Temperate_phage	3.2e-213	84.2
SQG28169.1\|819100_819532_+	phage protein	Q938J8	Temperate_phage	5.2e-73	99.3
SQG28170.1\|819534_820140_+	phage protein	Q938J7	Temperate_phage	4.8e-88	98.0
SQG28171.1\|820157_820430_+	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQG28172.1\|820426_820654_+\|holin	prophage LambdaSa03, holin	A7J2B3	Streptococcus_phage	7.6e-31	98.7
SQG28173.1\|820662_820773_+	phage membrane protein	A7J2B4	Streptococcus_phage	1.8e-09	97.2
SQG28174.1\|820769_821978_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	1.5e-210	85.6
SQG28175.1\|822116_822641_+	phage protein	Q938J3	Temperate_phage	4.0e-99	100.0
SQG28176.1\|822628_823495_+	phage protein	Q938J2	Temperate_phage	3.7e-134	100.0
SQG28177.1\|823798_824512_+	mitogen	Q938J1	Temperate_phage	9.0e-78	59.5
SQG28178.1\|824793_825582_+	exotoxin M precursor	Q938J1	Temperate_phage	9.1e-47	41.4
SQG28179.1\|825696_825885_+	phage protein	A3F673	Streptococcus_phage	1.2e-21	84.7
SQG28180.1\|826475_827090_+	membrane protein	M1Q152	Streptococcus_phage	1.1e-50	52.3
825960:826055	attR	NA	NA	NA	NA
SQG28181.1\|827216_828002_-	ABC transporter permease protein	NA	NA	NA	NA
SQG28182.1\|828011_828710_-	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQG28183.1\|828709_829081_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQG28184.1\|829265_832376_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	8.3e-120	29.9

DBSCAN-SWA_5

1010568 : 1154948

175

Streptococcus_phage(78.07%)

protease,tail,terminase,tRNA,capsid,portal,integrase

attL 1110419:1110467|attR 1152176:1152224

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28365.1\|1010568_1011945_+\|tRNA	tRNA modification GTPase	NA	NA	NA	NA
SQG28366.1\|1012012_1013422_-	dipeptidase	NA	NA	NA	NA
SQG28367.1\|1013546_1014149_-	NAD(P)H-dependent quinone reductase	NA	NA	NA	NA
SQG28368.1\|1014333_1016130_-	excinuclease ABC subunit C	NA	NA	NA	NA
SQG28369.1\|1016231_1017629_-	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
SQG28370.1\|1017743_1018790_-	bacterial extracellular solute-binding family protein	NA	NA	NA	NA
SQG28371.1\|1018783_1019572_-	response regulator	NA	NA	NA	NA
SQG28372.1\|1019575_1021225_-	two-component sensor kinase	Q9EYF3	Enterobacteria_phage	1.8e-12	33.3
SQG28373.1\|1021360_1022188_-	phospotransferase system (PTS), enzyme II component D	NA	NA	NA	NA
SQG28374.1\|1022184_1022994_-	PTS system, mannose-specific IIC component	NA	NA	NA	NA
SQG28375.1\|1023010_1023502_-	PTS system mannose/fructose family transporter subunit IIB	NA	NA	NA	NA
SQG28376.1\|1023520_1023946_-	PTS system mannose-specific transporter subunit IIA	NA	NA	NA	NA
SQG28377.1\|1024152_1025172_-	hypothetical membrane spanning protein	NA	NA	NA	NA
SQG28378.1\|1025301_1025739_-	methionine sulfoxide reductase B	NA	NA	NA	NA
SQG28379.1\|1025924_1027265_-	Collagen-like surface protein	NA	NA	NA	NA
SQG28380.1\|1027542_1029375_-	GTP-binding protein LepA	A0A2K9L2P9	Tupanvirus	2.2e-19	41.0
SQG28381.1\|1029708_1029906_-	nucleoside diphosphate kinase protein Ndk	NA	NA	NA	NA
SQG28382.1\|1030128_1030311_-	phage protein	A3F673	Streptococcus_phage	1.0e-17	71.7
SQG28383.1\|1030509_1030719_-	repressor C1	A3F668	Streptococcus_phage	1.2e-30	100.0
SQG28384.1\|1030872_1031019_+	Uncharacterised protein	A3F667	Streptococcus_phage	4.0e-17	97.9
SQG28385.1\|1031159_1031411_+	Uncharacterised protein	A3F666	Streptococcus_phage	2.8e-42	96.4
SQG28386.1\|1031674_1031914_+	Phage protein	NA	NA	NA	NA
SQG28387.1\|1031971_1032328_+	phage protein	NA	NA	NA	NA
SQG28388.1\|1032444_1033650_-	N-acetylmuramoyl-L-alanine amidase	A7J2B5	Streptococcus_phage	3.2e-200	82.5
SQG28389.1\|1033637_1033760_-	phage membrane protein	NA	NA	NA	NA
SQG28390.1\|1033762_1033948_-	phage protein	Q938J5	Temperate_phage	6.6e-25	98.4
SQG28391.1\|1033944_1034244_-	phage protein	Q938J6	Temperate_phage	1.9e-42	93.8
SQG28392.1\|1034254_1034872_-	phage protein	Q938J7	Temperate_phage	1.0e-77	87.8
SQG28393.1\|1034874_1035303_-	phage protein	Q938J8	Temperate_phage	1.9e-54	78.6
SQG28394.1\|1035314_1037330_-	Phage infection protein	Q938J9	Temperate_phage	2.4e-176	73.2
SQG28395.1\|1037344_1038349_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.4e-108	63.0
SQG28396.1\|1038345_1040397_-	phage protein	A3F656	Streptococcus_phage	0.0e+00	84.0
SQG28397.1\|1040393_1041164_-\|tail	phage tail protein	A3F655	Streptococcus_phage	7.8e-128	87.1
SQG28398.1\|1041176_1045277_-\|tail	tail protein	A3F654	Streptococcus_phage	0.0e+00	68.5
SQG28399.1\|1045320_1045419_-	Uncharacterised protein	A3F653	Streptococcus_phage	7.0e-10	96.9
SQG28400.1\|1045502_1045805_-	Uncharacterised protein	A3F652	Streptococcus_phage	3.1e-48	97.0
SQG28401.1\|1045897_1046482_-\|tail	major tail protein - phage associated	A3F651	Streptococcus_phage	1.6e-93	90.2
SQG28402.1\|1046493_1046874_-	Uncharacterised protein	A3F650	Streptococcus_phage	2.4e-61	97.6
SQG28403.1\|1046866_1047265_-	Uncharacterised protein	A3F649	Streptococcus_phage	2.9e-70	100.0
SQG28404.1\|1047266_1047629_-	Uncharacterised protein	A3F648	Streptococcus_phage	2.1e-59	96.7
SQG28405.1\|1047621_1047930_-	Uncharacterised protein	A3F647	Streptococcus_phage	8.1e-44	92.2
SQG28406.1\|1047929_1048103_-	Uncharacterised protein	A3F646	Streptococcus_phage	1.1e-21	93.0
SQG28407.1\|1048113_1049247_-\|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	A3F645	Streptococcus_phage	3.9e-200	95.8
SQG28408.1\|1049263_1050070_-	scaffolding protein	A3F644	Streptococcus_phage	1.2e-147	98.9
SQG28409.1\|1050050_1051238_-\|portal	HK97 family phage portal protein	A3F643	Streptococcus_phage	3.3e-218	96.5
SQG28410.1\|1051390_1051603_-	Uncharacterised protein	A3F642	Streptococcus_phage	1.4e-34	97.1
SQG28411.1\|1051605_1053336_-\|terminase	putative phage terminase, large subunit	A3F641	Streptococcus_phage	0.0e+00	97.0
SQG28412.1\|1053348_1053666_-	Uncharacterised protein	A3F640	Streptococcus_phage	3.9e-49	99.0
SQG28413.1\|1053806_1054112_-	HNH endonuclease	A3F639	Streptococcus_phage	3.8e-54	96.0
SQG28414.1\|1054104_1054491_-	Uncharacterised protein	A3F638	Streptococcus_phage	1.4e-64	93.0
SQG28415.1\|1054516_1054720_-	Uncharacterised protein	NA	NA	NA	NA
SQG28416.1\|1054777_1055071_-	Uncharacterised protein	NA	NA	NA	NA
SQG28417.1\|1055224_1055800_-	phage associated recombinase	A3F636	Streptococcus_phage	7.4e-107	99.5
SQG28418.1\|1055959_1056361_-	phage 31 late promoter transcriptional activator	A3F635	Streptococcus_phage	2.7e-71	100.0
SQG28419.1\|1056375_1057203_-	B-cell receptor associated protein-like protein	A3F634	Streptococcus_phage	1.3e-117	100.0
SQG28420.1\|1057205_1057544_-	immunity repressor protein - phage associated	A3F633	Streptococcus_phage	1.1e-54	92.9
SQG28421.1\|1057540_1057822_-	Uncharacterised protein	A3F632	Streptococcus_phage	4.5e-33	92.2
SQG28422.1\|1057836_1058022_-	single strand binding protein - phage associated	A3F624	Streptococcus_phage	6.6e-25	91.8
SQG28423.1\|1058018_1058228_-	single strand binding protein	M1NRI2	Streptococcus_phage	4.0e-26	79.4
SQG28424.1\|1058224_1058446_-	Uncharacterised protein	NA	NA	NA	NA
SQG28425.1\|1058442_1058928_-	phage protein	A0A1S5S9L5	Streptococcus_phage	5.6e-23	41.4
SQG28426.1\|1058932_1059577_-	phage protein	L0P368	Streptococcus_phage	4.6e-81	65.7
SQG28427.1\|1059566_1060010_-	DNA N-4 cytosine methyltransferase M.NgoMXV	A0A097PAU8	Streptococcus_pyogenes_phage	3.5e-72	82.9
SQG28428.1\|1060054_1060324_-	phage membrane protein	A7J287	Streptococcus_phage	1.4e-28	80.9
SQG28429.1\|1060320_1060491_-	phage protein	Q938M0	Temperate_phage	2.7e-09	55.4
SQG28430.1\|1060487_1060931_-	phage protein	A0A1C9LX52	Streptococcus_phage	1.6e-32	55.0
SQG28431.1\|1060947_1061073_-	phage protein	NA	NA	NA	NA
SQG28432.1\|1061086_1061314_-	phage protein	C5J991	Streptococcus_phage	9.3e-13	49.3
SQG28433.1\|1061313_1062126_-	phage DNA replication protein	A0A1P8VVV9	Streptococcus_phage	6.8e-122	77.6
SQG28434.1\|1062125_1062887_-	dnaD and phage-associated domain protein	A0A220GFI5	Streptococcus_phage	9.1e-28	56.1
SQG28435.1\|1062879_1064220_-	DNA polymerase III delta prime subunit	A0A1P8VVQ6	Streptococcus_phage	7.1e-209	84.7
SQG28436.1\|1064206_1064395_-	Uncharacterised protein	NA	NA	NA	NA
SQG28437.1\|1064515_1064707_-	Uncharacterised protein	NA	NA	NA	NA
SQG28438.1\|1064799_1065057_-	phage protein	A3F618	Streptococcus_phage	5.4e-41	98.8
SQG28439.1\|1065130_1065850_-	antirepressor - phage associated	A3F617	Streptococcus_phage	4.6e-106	78.7
SQG28440.1\|1065901_1066402_+	Uncharacterised protein	NA	NA	NA	NA
SQG28441.1\|1066521_1066656_-	Uncharacterised protein	A3F616	Streptococcus_phage	2.4e-16	95.5
SQG28442.1\|1066729_1066942_-	phage protein	M1Q1B4	Streptococcus_phage	1.7e-13	52.9
SQG28443.1\|1066976_1067252_-	Uncharacterised protein	NA	NA	NA	NA
SQG28444.1\|1067540_1067891_+	repressor - phage associated	A0A1S5SAD3	Streptococcus_phage	1.2e-35	63.5
SQG28445.1\|1067894_1068287_+	phage protein	A3F612	Streptococcus_phage	2.2e-38	68.7
SQG28446.1\|1068297_1069038_+	phage protein	A3F611	Streptococcus_phage	1.6e-130	100.0
SQG28447.1\|1069348_1070545_+\|integrase	phage associated integrase	A3F610	Streptococcus_phage	3.9e-227	99.0
SQG28448.1\|1070752_1071415_-	CRISPR-associated family protein	NA	NA	NA	NA
SQG28449.1\|1071404_1071716_-	CRISPR-associated Cas2 family protein	NA	NA	NA	NA
SQG28450.1\|1071742_1072612_-	cytoplasmic protein	NA	NA	NA	NA
SQG28451.1\|1072611_1076715_-	CRISPR-associated protein, Csn1 family	NA	NA	NA	NA
SQG28452.1\|1077160_1077793_-	membrane protein	NA	NA	NA	NA
SQG28453.1\|1077792_1078557_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
SQG28454.1\|1078556_1079309_-	oleoyl-[acyl-carrier-protein] hydrolase	NA	NA	NA	NA
SQG28455.1\|1079318_1080515_-	coproporphyrinogen III oxidase	NA	NA	NA	NA
SQG28456.1\|1080511_1081216_-	acetyltransferase GNAT Family	NA	NA	NA	NA
SQG28457.1\|1081277_1082633_-	phosphoglucosamine mutase	NA	NA	NA	NA
SQG28458.1\|1082686_1083643_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQG28459.1\|1083639_1084491_-	disA bacterial checkpoint controller nucleotide-binding family protein	NA	NA	NA	NA
SQG28460.1\|1084603_1085941_+	UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase	NA	NA	NA	NA
SQG28461.1\|1085940_1086732_+	cobyric acid synthase	NA	NA	NA	NA
SQG28462.1\|1086840_1087830_-	lipoate-protein ligase	A0A2H4UVX5	Bodo_saltans_virus	8.2e-13	25.2
SQG28463.1\|1088062_1090480_+	Hyaluronate lyase precursor	NA	NA	NA	NA
SQG28464.1\|1091153_1092917_-	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-33	25.5
SQG28465.1\|1093243_1094653_-	branched-chain alpha-keto acid dehydrogenase E2 subunit	NA	NA	NA	NA
SQG28466.1\|1094837_1095839_-	TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit	NA	NA	NA	NA
SQG28467.1\|1095894_1096863_-	Pyruvate dehydrogenase E1 component alpha subunit	NA	NA	NA	NA
SQG28468.1\|1097147_1099055_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.4e-55	30.9
SQG28469.1\|1099100_1099427_-\|protease	protease	NA	NA	NA	NA
SQG28470.1\|1099456_1100242_-	acetyl esterase	NA	NA	NA	NA
SQG28471.1\|1100374_1102036_-	Zn-dependent hydrolase	NA	NA	NA	NA
SQG28472.1\|1102239_1102998_-	spermidine/putrescine import ATP-binding protein potA	A0A1V0SE00	Indivirus	5.9e-11	28.3
SQG28473.1\|1102994_1103864_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SQG28474.1\|1104039_1104204_-	Uncharacterised protein	NA	NA	NA	NA
SQG28475.1\|1104208_1105207_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQG28476.1\|1105560_1107213_+	fibronectin-binding protein	A0A1J0F9J4	Only_Syngen_Nebraska_virus	1.7e-07	41.0
SQG28477.1\|1107271_1108519_-	Tetratricopeptide repeat family protein	NA	NA	NA	NA
SQG28478.1\|1108508_1109690_-	permease	NA	NA	NA	NA
SQG28479.1\|1109747_1110224_-	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA
1110419:1110467	attL	NA	NA	NA	NA
SQG28480.1\|1110827_1111538_-	exotoxin H precursor	NA	NA	NA	NA
SQG28481.1\|1111563_1112343_-	exotoxin I precursor	A0A075M4C7	Staphylococcus_phage	9.3e-28	32.7
SQG28482.1\|1112514_1113849_-	Phage lysin, N-acetylmuramoyl-L-alanine amidase	Q5MY96	Streptococcus_phage	1.4e-246	92.6
SQG28483.1\|1113849_1113957_-	phage membrane protein	A7J2B4	Streptococcus_phage	5.5e-08	97.1
SQG28484.1\|1113960_1114146_-	phage protein	Q938J5	Temperate_phage	1.9e-24	95.1
SQG28485.1\|1114142_1114439_-	phage protein	Q938J6	Temperate_phage	3.7e-46	98.0
SQG28486.1\|1114448_1115060_-	phage protein	A7J2B1	Streptococcus_phage	1.8e-82	89.7
SQG28487.1\|1115062_1115224_-	phage protein	NA	NA	NA	NA
SQG28488.1\|1115232_1117251_-	Phage infection protein	Q938J9	Temperate_phage	4.6e-119	53.1
SQG28489.1\|1117263_1118385_-	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.8e-128	72.2
SQG28490.1\|1118381_1120361_-	phage protein	A7J2A7	Streptococcus_phage	0.0e+00	93.6
SQG28491.1\|1120370_1121213_-	phage protein	A7J2A6	Streptococcus_phage	8.8e-157	97.9
SQG28492.1\|1121224_1125607_-\|tail	phage minor tail protein	A7J2A5	Streptococcus_phage	2.5e-226	75.2
SQG28493.1\|1125621_1125855_-	phage protein	A7J2A4	Streptococcus_phage	1.3e-33	98.7
SQG28494.1\|1125929_1126385_-	phage protein	A7J2A3	Streptococcus_phage	5.3e-76	99.3
SQG28495.1\|1126438_1127038_-\|tail	phage major tail protein	A7J2A2	Streptococcus_phage	1.7e-90	97.1
SQG28496.1\|1127049_1127409_-	phage protein	A7J2A1	Streptococcus_phage	1.2e-57	98.3
SQG28497.1\|1127412_1127757_-	phage protein	A7J2A0	Streptococcus_phage	1.1e-54	97.4
SQG28498.1\|1127753_1128032_-	phage protein	A7J299	Streptococcus_phage	1.9e-47	100.0
SQG28499.1\|1128042_1128399_-	phage protein	A7J298	Streptococcus_phage	7.9e-59	99.2
SQG28500.1\|1128410_1129298_-	phage protein	A7J297	Streptococcus_phage	2.1e-161	100.0
SQG28501.1\|1129310_1129880_-	phage protein	A7J296	Streptococcus_phage	1.9e-83	100.0
SQG28502.1\|1130041_1130308_-	putative phage associated protein	Q938K9	Temperate_phage	2.9e-37	96.6
SQG28503.1\|1130312_1130429_-	phage membrane protein	A7J294	Streptococcus_phage	2.0e-08	100.0
SQG28504.1\|1130528_1131977_-	phage protein	A7J293	Streptococcus_phage	1.3e-277	99.4
SQG28505.1\|1131936_1133469_-\|portal	phage portal protein	A7J292	Streptococcus_phage	4.5e-292	99.8
SQG28506.1\|1133484_1134762_-\|terminase	terminase large subunit	A7J291	Streptococcus_phage	6.9e-246	99.5
SQG28507.1\|1134751_1135204_-\|terminase	phage terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
SQG28508.1\|1135293_1135710_-	phage protein	A7J289	Streptococcus_phage	9.5e-72	98.6
SQG28509.1\|1135693_1135840_-	Uncharacterised protein	NA	NA	NA	NA
SQG28510.1\|1135842_1136115_-	phage membrane protein	A7J287	Streptococcus_phage	5.7e-25	73.3
SQG28511.1\|1136107_1136278_-	phage protein	A7J285	Streptococcus_phage	9.0e-21	92.3
SQG28512.1\|1136278_1137601_-	SNF2 family phage protein	A7J284	Streptococcus_phage	1.1e-251	97.5
SQG28513.1\|1137597_1137873_-	phage protein	A7J283	Streptococcus_phage	3.5e-46	98.9
SQG28514.1\|1138258_1140643_-	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	8.2e-277	94.6
SQG28515.1\|1140647_1142570_-	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	98.3
SQG28516.1\|1142612_1143170_-	phage protein	D2J040	Enterococcus_phage	8.6e-52	59.0
SQG28517.1\|1143184_1144342_-	phage protein	A7J278	Streptococcus_phage	3.0e-216	97.9
SQG28518.1\|1144341_1144641_-	phage protein	A7J277	Streptococcus_phage	1.8e-43	100.0
SQG28519.1\|1144729_1144933_-	phage protein	A7J276	Streptococcus_phage	1.6e-32	98.5
SQG28520.1\|1145276_1145426_-	phage protein	A7J275	Streptococcus_phage	3.8e-15	90.0
SQG28521.1\|1145422_1145797_-	phage protein	A7J274	Streptococcus_phage	2.4e-50	82.9
SQG28522.1\|1145837_1146023_-	phage protein	NA	NA	NA	NA
SQG28523.1\|1146015_1146186_-	phage protein	A7J273	Streptococcus_phage	2.9e-19	87.5
SQG28524.1\|1146187_1146499_-	excisionase	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
SQG28525.1\|1146605_1146821_+	Uncharacterised protein	A0A1S5SA41	Streptococcus_phage	1.9e-15	61.4
SQG28526.1\|1146794_1147043_-	Uncharacterised protein	A0A141E1M0	Streptococcus_phage	1.6e-26	69.5
SQG28527.1\|1147122_1147332_+	Uncharacterised protein	NA	NA	NA	NA
SQG28528.1\|1147473_1147734_+	Uncharacterised protein	M1PS67	Streptococcus_phage	5.8e-27	70.9
SQG28529.1\|1147662_1147821_-	Uncharacterised protein	NA	NA	NA	NA
SQG28530.1\|1147832_1148486_-	prophage LambdaSa1, antirepressor	A0A2H4IZX7	uncultured_Caudovirales_phage	4.4e-71	59.7
SQG28531.1\|1148497_1148689_-	phage protein	A7J270	Streptococcus_phage	4.0e-25	92.1
SQG28532.1\|1148995_1149145_+	Uncharacterised protein	NA	NA	NA	NA
SQG28533.1\|1149842_1150190_+	Cro/CI family phage transcriptional regulator	Q7Y4M0	Streptococcus_phage	1.8e-39	69.2
SQG28534.1\|1150193_1150574_+	peptidase	A0A1S5SFH2	Streptococcus_phage	8.0e-41	61.1
SQG28535.1\|1150585_1150852_+	phage protein	NA	NA	NA	NA
SQG28536.1\|1150979_1152119_+\|integrase	phage integrase	A1EAB7	Streptococcus_phage	1.2e-119	56.3
SQG28537.1\|1152201_1153242_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-68	43.9
1152176:1152224	attR	NA	NA	NA	NA
SQG28538.1\|1153485_1154079_-	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
SQG28539.1\|1154078_1154948_-	glucose-1-phosphate thymidyl transferase	K7QKA7	Escherichia_phage	2.4e-101	64.6

DBSCAN-SWA_6

1165627 : 1220729

Bacillus_virus(23.08%)

head,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28551.1\|1165627_1166527_-\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQG28552.1\|1166660_1166837_+	putative uncharacterized protein ORF 3	NA	NA	NA	NA
SQG28553.1\|1166954_1167863_-	exfoliative toxin	NA	NA	NA	NA
SQG28554.1\|1168099_1168519_-	glutathione S-transferase	NA	NA	NA	NA
SQG28555.1\|1168829_1169816_-	Rhodanese domain protein UPF0176, Firmicutes subgroup	NA	NA	NA	NA
SQG28556.1\|1170016_1170319_+	Uncharacterised protein	NA	NA	NA	NA
SQG28557.1\|1170865_1172071_-	30S ribosomal protein S1	NA	NA	NA	NA
SQG28558.1\|1172461_1172692_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQG28559.1\|1172755_1173778_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQG28560.1\|1173900_1176324_-	topoisomerase IV subunit	G3M9Z5	Bacillus_virus	1.6e-97	33.3
SQG28561.1\|1176450_1178400_-	topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.2e-121	41.8
SQG28562.1\|1178534_1179176_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQG28563.1\|1179236_1180505_-	dihydroorotase	NA	NA	NA	NA
SQG28564.1\|1180636_1181290_-	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	2.3e-40	40.1
SQG28565.1\|1181422_1182073_-	amino-acid ABC transporter permease yckA	NA	NA	NA	NA
SQG28566.1\|1182101_1182965_-	cystine-binding protein	NA	NA	NA	NA
SQG28567.1\|1183082_1184537_-	amidase	NA	NA	NA	NA
SQG28568.1\|1184733_1185363_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
SQG28569.1\|1185420_1186113_-	orotidine 5'-phosphate decarboxylase	NA	NA	NA	NA
SQG28570.1\|1186389_1186926_-	Uncharacterised protein	NA	NA	NA	NA
SQG28571.1\|1187147_1188053_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQG28572.1\|1188132_1188921_-	LytR family transcriptional regulator	NA	NA	NA	NA
SQG28573.1\|1188913_1189684_-	Purine nucleoside phosphorylase	NA	NA	NA	NA
SQG28574.1\|1190211_1191021_-	purine nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	8.7e-53	42.2
SQG28575.1\|1191004_1191445_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	8.9e-36	55.3
SQG28576.1\|1191460_1192672_-	phosphopentomutase	NA	NA	NA	NA
SQG28577.1\|1192748_1193432_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
SQG28578.1\|1193809_1195909_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	9.6e-120	38.0
SQG28579.1\|1195966_1196710_-	virulence factor relevant regulator	NA	NA	NA	NA
SQG28580.1\|1196857_1197457_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
SQG28581.1\|1197466_1198696_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.8e-138	60.5
SQG28582.1\|1198825_1198996_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQG28583.1\|1199015_1199513_-	dihydrofolate reductase	W5QU76	Bacillus_phage	8.6e-11	34.4
SQG28584.1\|1199592_1200432_-	thymidylate synthase	U5J9N5	Bacillus_phage	1.7e-83	53.2
SQG28585.1\|1200640_1201816_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQG28586.1\|1201802_1203080_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQG28587.1\|1203309_1204299_-	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQG28588.1\|1204285_1205299_-	phosphomevalonate kinase	NA	NA	NA	NA
SQG28589.1\|1205291_1206236_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQG28590.1\|1206217_1207096_-	mevalonate kinase	NA	NA	NA	NA
SQG28591.1\|1207388_1208621_-	two component system histidine kinase	NA	NA	NA	NA
SQG28592.1\|1208629_1209298_-	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQG28593.1\|1209300_1209951_-	GTP pyrophosphokinase	NA	NA	NA	NA
SQG28594.1\|1210170_1212183_+	5'-nucleotidase	NA	NA	NA	NA
SQG28595.1\|1212264_1212675_-	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQG28596.1\|1213566_1215444_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.9e-64	31.7
SQG28597.1\|1215440_1216649_-\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	5.3e-38	45.0
SQG28598.1\|1216773_1217622_-	degV family protein	NA	NA	NA	NA
SQG28599.1\|1217621_1218002_-\|transposase	transposase	NA	NA	NA	NA
SQG28600.1\|1218229_1218406_-	nucleoside diphosphate kinase	NA	NA	NA	NA
SQG28601.1\|1218908_1219928_+\|protease	igG-degrading protease	NA	NA	NA	NA
SQG28602.1\|1220609_1220729_+\|transposase	degenerate transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1257096 : 1267699

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28636.1\|1257096_1258239_-	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	1.4e-24	27.3
SQG28637.1\|1258473_1258914_+	membrane protein	NA	NA	NA	NA
SQG28638.1\|1258943_1260212_+	folylpolyglutamate synthase	NA	NA	NA	NA
SQG28639.1\|1260299_1261652_-	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	1.7e-29	24.7
SQG28640.1\|1261872_1262214_-	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	3.4e-19	40.2
SQG28641.1\|1262274_1263441_-	chorismate synthase	A0A291AU41	Pandoravirus	3.7e-36	33.6
SQG28642.1\|1263534_1264221_-	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQG28643.1\|1264217_1265381_-	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQG28644.1\|1265488_1267699_+	phosphoglycerol transferase	W6LM83	Streptococcus_phage	2.9e-268	69.1

DBSCAN-SWA_8

1438215 : 1444865

Streptococcus_phage(66.67%)

portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28791.1\|1438215_1439040_-	asparagine ligase A	M1PB22	Moumouvirus	6.2e-22	33.1
SQG28792.1\|1439063_1439402_-	huntington interacting protein HYPE	NA	NA	NA	NA
SQG28793.1\|1439818_1440133_-	prophage minor structural protein	Q6DMT0	Streptococcus_phage	4.9e-20	64.5
SQG28794.1\|1440198_1440651_-\|portal	portal protein	E4ZFM3	Streptococcus_phage	4.4e-62	84.9
SQG28795.1\|1440755_1441028_-	cytoplasmic protein	E4ZFM1	Streptococcus_phage	1.2e-06	48.1
SQG28796.1\|1441046_1441352_-	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA
SQG28797.1\|1441351_1441654_-	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA
SQG28798.1\|1441708_1441867_-	prophage LambdaSa04	M1PSF2	Streptococcus_phage	6.7e-18	84.6
SQG28799.1\|1441909_1442794_+	Uncharacterised protein	NA	NA	NA	NA
SQG28800.1\|1442793_1443018_+	Uncharacterised protein	NA	NA	NA	NA
SQG28801.1\|1443008_1443737_+	Chromosome segregation ATPase	NA	NA	NA	NA
SQG28802.1\|1443821_1444379_+	chromosome segregation ATPase	NA	NA	NA	NA
SQG28803.1\|1444375_1444666_+	Chromosome segregation ATPase	NA	NA	NA	NA
SQG28804.1\|1444655_1444865_+	vanUG2	A0A2K5B263	Erysipelothrix_phage	9.8e-17	61.5

DBSCAN-SWA_9

1470628 : 1499042

Tupanvirus(14.29%)

bacteriocin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28826.1\|1470628_1472572_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	1.0e-120	38.7
SQG28827.1\|1472993_1474328_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
SQG28828.1\|1474329_1475328_-	glycosyltransferase	NA	NA	NA	NA
SQG28829.1\|1475458_1476460_-	Catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
SQG28830.1\|1476633_1477719_+	Xaa-Pro dipeptidase	NA	NA	NA	NA
SQG28831.1\|1477767_1478433_+	NAD(P)H nitroreductase yfkO	NA	NA	NA	NA
SQG28832.1\|1478443_1478821_+	bleomycin resistance protein	NA	NA	NA	NA
SQG28833.1\|1478965_1479892_+	glucosyl transferase family 2	V5USA4	Oenococcus_phage	1.5e-77	47.5
SQG28834.1\|1480102_1480786_+	membrane protein	NA	NA	NA	NA
SQG28835.1\|1480785_1481712_+	membrane protein	NA	NA	NA	NA
SQG28836.1\|1481761_1482409_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
SQG28837.1\|1482526_1483246_-	glutamine cyclotransferase	NA	NA	NA	NA
SQG28838.1\|1483251_1483719_-	ssrA-binding protein	W5RAM5	Staphylococcus_phage	7.5e-41	57.0
SQG28839.1\|1483751_1486052_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.3e-90	39.8
SQG28840.1\|1486148_1486385_-	preprotein translocase subunit	NA	NA	NA	NA
SQG28841.1\|1486573_1487767_-	major facilitator superfamily protein	NA	NA	NA	NA
SQG28842.1\|1487888_1489391_-	ATPase	A0A248XCZ8	Klebsiella_phage	2.6e-74	41.0
SQG28843.1\|1489580_1490174_-	dephospho-CoA kinase	NA	NA	NA	NA
SQG28844.1\|1490170_1490998_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
SQG28845.1\|1491169_1492036_-	transcriptional regulator	NA	NA	NA	NA
SQG28846.1\|1492366_1492585_+	Uncharacterised protein	NA	NA	NA	NA
SQG28847.1\|1493106_1493376_+	Uncharacterised protein	NA	NA	NA	NA
SQG28848.1\|1493723_1494155_-	histidine kinase	NA	NA	NA	NA
SQG28849.1\|1494199_1495267_-	Uncharacterised protein	NA	NA	NA	NA
SQG28850.1\|1495520_1495922_-	Uncharacterised protein	NA	NA	NA	NA
SQG28851.1\|1496115_1496397_-	Uncharacterised protein	NA	NA	NA	NA
SQG28852.1\|1496446_1496641_-\|bacteriocin	bacteriocin-associated protein	NA	NA	NA	NA
SQG28853.1\|1496725_1496935_-	Uncharacterised protein	NA	NA	NA	NA
SQG28854.1\|1496935_1497136_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQG28855.1\|1497148_1497376_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
SQG28856.1\|1497693_1498116_+\|transposase	transposase	NA	NA	NA	NA
SQG28857.1\|1498112_1498262_+\|transposase	IS1191 transposase	NA	NA	NA	NA
SQG28858.1\|1498599_1498782_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQG28859.1\|1498796_1499042_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA

DBSCAN-SWA_10

1537042 : 1546560

Streptococcus_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28901.1\|1537042_1537768_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.1e-128	92.1
SQG28902.1\|1537748_1538246_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	8.7e-72	89.9
SQG28903.1\|1538467_1539055_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQG28904.1\|1539513_1540266_+	ADP-ribosyltransferase	NA	NA	NA	NA
SQG28905.1\|1540427_1542608_-	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.8e-170	43.2
SQG28906.1\|1542574_1543063_-	nrdI protein	R4JF54	Bacillus_phage	1.3e-11	37.5
SQG28907.1\|1543066_1544080_-	ribonucleotide-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.5e-97	53.7
SQG28908.1\|1544562_1546560_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SHR2	Klosneuvirus	1.0e-86	35.0

DBSCAN-SWA_11

1554897 : 1560932

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG28913.1\|1554897_1555725_+	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	2.9e-128	79.5
SQG28914.1\|1555798_1556155_-	arsenate reductase	M1PLC0	Streptococcus_phage	3.1e-39	65.0
SQG28915.1\|1556454_1557084_+	copper homeostasis protein	NA	NA	NA	NA
SQG28916.1\|1557130_1557523_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQG28917.1\|1557549_1558413_-	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	3.8e-115	75.0
SQG28918.1\|1558417_1558741_-	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQG28919.1\|1559403_1560279_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.3e-73	48.3
SQG28920.1\|1560296_1560932_-	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4

DBSCAN-SWA_12

1856671 : 1867696

Streptococcus_phage(76.92%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG29183.1\|1856671_1857103_-	phage protein	A0A1S5SFS8	Streptococcus_phage	3.6e-05	26.8
SQG29184.1\|1857601_1858069_-	Uncharacterised protein	A0A1X9I5V2	Streptococcus_phage	1.3e-40	51.0
SQG29185.1\|1858198_1858729_-	Uncharacterised protein	A0A1X9I5U4	Streptococcus_phage	2.5e-48	55.9
SQG29186.1\|1858749_1858923_-	Uncharacterised protein	A0A1X9I5U0	Streptococcus_phage	1.8e-16	78.9
SQG29187.1\|1859259_1860762_-	phage replication protein	Q9AZI5	Lactococcus_phage	2.0e-63	37.2
SQG29188.1\|1860781_1861651_-	Phage protein	A0A1X9I6L2	Streptococcus_phage	1.8e-125	75.4
SQG29189.1\|1861785_1862067_-	phage protein	A0A1X9I5U9	Streptococcus_phage	2.5e-31	75.6
SQG29190.1\|1862059_1862392_-	phage protein	A0A1X9I5Z6	Streptococcus_phage	2.5e-14	46.5
SQG29191.1\|1862403_1862604_-	Uncharacterised protein	NA	NA	NA	NA
SQG29192.1\|1862596_1862806_-	Uncharacterised protein	NA	NA	NA	NA
SQG29193.1\|1862802_1863231_-	Uncharacterised protein	A0A1X9I5T7	Streptococcus_phage	7.8e-61	77.5
SQG29194.1\|1863605_1863794_-	helix-turn-helix family protein	A0A141E205	Streptococcus_phage	1.2e-05	42.6
SQG29195.1\|1863983_1864604_+	repressor protein	A0A097PBE5	Streptococcus_pyogenes_phage	1.1e-18	53.8
SQG29196.1\|1864978_1865983_+	Uncharacterised protein	Q331X4	Clostridium_botulinum_C_phage	6.8e-15	28.1
SQG29197.1\|1865982_1866435_+	Death on curing protein	NA	NA	NA	NA
SQG29198.1\|1866523_1867696_+	Integrase/recombinase, phage associated	A0A1X9I5Y5	Streptococcus_phage	1.6e-164	74.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage