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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS483391 Streptococcus pyogenes strain NCTC8320 genome assembly, chromosome: 1 1 crisprs DinG,csm6,cas3,DEDDh,csa3 0 0 8 1

Results visualization

1. LS483391
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483391_2 997183-997284 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 36584 : 48947 8 Synechococcus_phage(28.57%) NA NA
DBSCAN-SWA_2 329359 : 335393 9 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 343737 : 386951 50 Bacillus_phage(23.08%) protease,tRNA,transposase,bacteriocin,integrase attL 333064:333078|attR 387917:387931
DBSCAN-SWA_4 534185 : 603452 88 Streptococcus_phage(58.06%) tail,capsid,holin,protease,tRNA,terminase,transposase,portal,bacteriocin,integrase attL 538855:538873|attR 579907:579925
DBSCAN-SWA_5 663699 : 717011 50 Streptococcus_phage(25.0%) head,protease,tRNA,transposase NA
DBSCAN-SWA_6 1000740 : 1064748 89 Streptococcus_phage(38.24%) tail,holin,terminase,transposase,portal,head,integrase attL 1007062:1007121|attR 1053701:1053799
DBSCAN-SWA_7 1130695 : 1210680 103 Streptococcus_phage(58.46%) tail,protease,tRNA,terminase,holin,head,integrase attL 1172082:1172101|attR 1208065:1208084
DBSCAN-SWA_8 1409984 : 1459928 73 Temperate_phage(56.67%) tail,capsid,tRNA,terminase,head,integrase attL 1448628:1448643|attR 1468245:1468260
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
LS483391.1|SQG44306.1|1419958_1420552_-|phage-protein 1419958_1420552_- 197 aa aa 89 NA NA 1409984-1459928 NA