CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483386	Streptococcus pyogenes strain NCTC13742 genome assembly, chromosome: 1	2 crisprs	DinG,csm6,RT,cas3,DEDDh,csa3	0	1	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483386_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483386_1

828928-829146

Orphan

II-A

Consensus_repeat	Method
TGTTTTGAATGGTCCCAAAAC	CRT

3 spacers

The CRISPR arrays of LS483386_1

>merge|LS483386|1|828928-829146|CRT
TGTTTTGAATGGTCCCAAAACGATTAGCTCAAGCATGCCTTTATAAATGTCGTTTTAGAGCTATGTTGTGTTGAATGGTCCCAAAACCAGCTTGGATTTAATAGCAGACCATGTTTTGTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAACGCACGAGTTTAACTCCCTTATTATTAGCTTGTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

>LS483386|1|1|828928-829146|CRT
TGTTTTGAATGGTCCCAAAAC	GATTAGCTCAAGCATGCCTTTATAAATGTCGTTTTAGAGCTATGT
TGTGTTGAATGGTCCCAAAAC	CAGCTTGGATTTAATAGCAGACCATGTTTTGTTTTAGAGCTATGT
TGTTTTGAATGGTCCCAAAAC	GCACGAGTTTAACTCCCTTATTATTAGCTTGTTTTAGAGCTATGC
TGTTTTGAATGGTCTCCATTC

Protein	Signature genes	Signature genes Name	Protein_function
LS483386.1\|SQG24383.1\|836045_836855_+\|PTS-system,-mannose-specific-IIC-component	unknown	unknown	gnl\|CDD\|226238
LS483386.1\|SQG24372.1\|825405_826602_+\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
LS483386.1\|SQG24381.1\|835085_835511_+\|PTS-system-mannose-specific-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
LS483386.1\|SQG24379.1\|833292_833730_+\|methionine-sulfoxide-reductase-B	unknown	unknown	gnl\|CDD\|234692
LS483386.1\|SQG24376.1\|829258_829456_+\|nucleoside-diphosphate-kinase-protein-Ndk	unknown	unknown	gnl\|CDD\|179085
LS483386.1\|SQG24370.1\|823288_824644_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
LS483386.1\|SQG24382.1\|835537_836029_+\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
LS483386.1\|SQG24369.1\|822278_823235_+\|hypothetical-membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
LS483386.1\|SQG24371.1\|824767_825409_+\|acetyltransferase-GNAT-Family	unknown	unknown	unknown
LS483386.1\|SQG24366.1\|819189_819981_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|225974
LS483386.1\|SQG24385.1\|837814_839464_+\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483386.1\|SQG24378.1\|831808_833107_+\|Collagen-like-surface-protein	unknown	unknown	gnl\|CDD\|237171
LS483386.1\|SQG24368.1\|821430_822282_+\|disA-bacterial-checkpoint-controller-nucleotide-binding-family-protein	unknown	unknown	gnl\|CDD\|224539
LS483386.1\|SQG24384.1\|836851_837679_+\|phospotransferase-system-(PTS),-enzyme-II-component-D	unknown	unknown	gnl\|CDD\|226239
LS483386.1\|SQG24377.1\|829789_831622_+\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
LS483386.1\|SQG24373.1\|826611_827364_+\|oleoyl-[acyl-carrier-protein]-hydrolase	unknown	unknown	gnl\|CDD\|226401
LS483386.1\|SQG24374.1\|827363_828128_+\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|319832
LS483386.1\|SQG24375.1\|828127_828760_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226884
LS483386.1\|SQG24380.1\|833859_834879_+\|hypothetical-membrane-spanning-protein	unknown	unknown	gnl\|CDD\|225411
LS483386.1\|SQG24367.1\|819980_821318_-\|UDP-N-acetylmuramoylalanyl-D-glutamate-2,-6-diaminopimelate-ligase	unknown	unknown	gnl\|CDD\|223840

Protein	Function_ID	Function_description	E-value
LS483386.1\|SQG24374.1\|827363_828128_+\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.49715e-128
LS483386.1\|SQG24383.1\|836045_836855_+\|PTS-system,-mannose-specific-IIC-component	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
LS483386.1\|SQG24372.1\|825405_826602_+\|coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
LS483386.1\|SQG24381.1\|835085_835511_+\|PTS-system-mannose-specific-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
LS483386.1\|SQG24379.1\|833292_833730_+\|methionine-sulfoxide-reductase-B	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.35343e-84
LS483386.1\|SQG24376.1\|829258_829456_+\|nucleoside-diphosphate-kinase-protein-Ndk	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	2.09148e-09
LS483386.1\|SQG24370.1\|823288_824644_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
LS483386.1\|SQG24382.1\|835537_836029_+\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.00329e-54
LS483386.1\|SQG24369.1\|822278_823235_+\|hypothetical-membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	1.65904e-113
LS483386.1\|SQG24366.1\|819189_819981_-\|cobyric-acid-synthase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	6.74846e-142
LS483386.1\|SQG24385.1\|837814_839464_+\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.69316e-77
LS483386.1\|SQG24378.1\|831808_833107_+\|Collagen-like-surface-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	1.08179e-11
LS483386.1\|SQG24368.1\|821430_822282_+\|disA-bacterial-checkpoint-controller-nucleotide-binding-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	2.09715e-101
LS483386.1\|SQG24377.1\|829789_831622_+\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LS483386.1\|SQG24384.1\|836851_837679_+\|phospotransferase-system-(PTS),-enzyme-II-component-D	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
LS483386.1\|SQG24373.1\|826611_827364_+\|oleoyl-[acyl-carrier-protein]-hydrolase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	9.74349e-109
LS483386.1\|SQG24375.1\|828127_828760_+\|membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	2.38885e-87
LS483386.1\|SQG24380.1\|833859_834879_+\|hypothetical-membrane-spanning-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	6.6919e-100
LS483386.1\|SQG24367.1\|819980_821318_-\|UDP-N-acetylmuramoylalanyl-D-glutamate-2,-6-diaminopimelate-ligase	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	1.8359e-109

>LS483386.1|SQG24375.1|828127_828760_+|membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHKVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARRQRLNVE
>LS483386.1|SQG24374.1|827363_828128_+|haloacid-dehalogenase-like-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLAKQFHVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>LS483386.1|SQG24373.1|826611_827364_+|oleoyl-[acyl-carrier-protein]-hydrolase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNILVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGCLLVDILSYFALLNPDTRKVATIPEDLVAPFKTDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>LS483386.1|SQG24372.1|825405_826602_+|coproporphyrinogen-III-oxidase
MKNQGKWFIHKNILSPKWYNKTMSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFYSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>LS483386.1|SQG24371.1|824767_825409_+|acetyltransferase-GNAT-Family
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTPKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>LS483386.1|SQG24370.1|823288_824644_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFQLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>LS483386.1|SQG24369.1|822278_823235_+|hypothetical-membrane-associated-protein
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDSDKYFISGYSYGAEVYLTSTNRIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPSGVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEISKIETGVDKVEVTSDESTIALIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIRVEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSSQVSIEPSVVTVQLTTTKK
>LS483386.1|SQG24368.1|821430_822282_+|disA-bacterial-checkpoint-controller-nucleotide-binding-family-protein
MNNLSSIDIKFLLSLFADPWLLAVHLLDILIVAYLIYRFIKALTGTKIMSLVQGVIFFLVLRFIAEWIGFTTITYLMNQVITYGVIAGVVIFTPEIRAGLEKFGRSTQVFLQKQYVSSESALVDALIKSVAYMGPRKIGALIAIEQTQTLQEYIATGIPLNADISSQLLINIFIPNTPLHDGAVIVGQNKIVAACAYLPLSESKAISKEFGTRHRAAIGLSENSDALTIIVSEETGAISVTRKGQFLHDLSTDEFETVLRTYLMSDSNVTLPWYKKILGGKSK
>LS483386.1|SQG24367.1|819980_821318_-|UDP-N-acetylmuramoylalanyl-D-glutamate-2,-6-diaminopimelate-ligase
MKTLLGIIAGKAAQSILTKLGRGSTYPGRLALACNKDILKDLSKDYDIVVVTGTNGKTLTTALTVGILKEAFGEIITNPSGANMITGITSTFLAAKKGKSGRQIAVLEIDEASLPRITTYLKPSLFVYTNIFRDQMDRYGEIYTTYQMIVDGARNAPKATILANGDSPIFSSKDIVNPVQYYGFDTAKHAPQLAHYNTEGILCPKCEHILQYRLNTYANLGDFICLNCGFKRPQLDYRLTELTTITNHSSEFIIDGQDYKINVGGLYNIYNALAAVSVAEFFGVSPEKIKAGFNKSKAVFGRQETFTIGDKSCTLILIKNPVGASQALEMIQLADYPFSLSVLLNANYADGIDTSWIWDANFELITQMPITEINAGGVRHSEIARRLRVTGFDDTKIKQAEKLEQIIETIEKQEAKHAYILATYTAMLEFRSLLADRHVVEKEMI
>LS483386.1|SQG24366.1|819189_819981_-|cobyric-acid-synthase
MTYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQSIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYGFENHQGRTFLSGDEKPLGRVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLSSYDDILKQEITEEYADLKSKASFNKV
>LS483386.1|SQG24376.1|829258_829456_+|nucleoside-diphosphate-kinase-protein-Ndk
MEQTFFMIKPDGVKQGEVVGEVLRWIERLRFTFKRFELRQASSKYLAKHDEALVINLLILNLKLT
>LS483386.1|SQG24377.1|829789_831622_+|GTP-binding-protein-LepA
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDTSEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>LS483386.1|SQG24378.1|831808_833107_+|Collagen-like-surface-protein
MNKTKQNKTKQNKTKQNKTKQNKTKHSLLCRYGLTSAAALLLTFGGASAVKANEQSNIGALQSQLQDLRENLPKVGDNIPDYNVLRKHEFYQHLQKFEDQLNLYLKVLDQNLSQLQGPRGDKGETGEQGPRGAQGPAGPQGPVGPAGKDGTQGPRGDKGETGEQGPRGAQGPAGPAGKDGTQGPRGDKGETGEQGPRGAQGPAGPQGPMGPAGERGEKGEPGTQGAKGDRGETGPAGPVGPRGDKGETGAKGEQGPAGKDGKAGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGKDGKDGQPGKPAPKTPEVPQKPGTAPHTPKTPQIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>LS483386.1|SQG24379.1|833292_833730_+|methionine-sulfoxide-reductase-B
METSDELKQRIGDLSYEVTQHAATESPFTGKYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRIEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>LS483386.1|SQG24380.1|833859_834879_+|hypothetical-membrane-spanning-protein
MSTHLRKLPGLLLCLLLALSAWYLGRLFPIIGAPVFAILLGMLLALFYEHGDKTKEGISFTSKCILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGSQKWLRLDVNTATLVGIGSSICGGSAIAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLIGLSNEGFATFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYQAKKEHDIVTEEGFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>LS483386.1|SQG24381.1|835085_835511_+|PTS-system-mannose-specific-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>LS483386.1|SQG24382.1|835537_836029_+|PTS-system-mannose/fructose-family-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>LS483386.1|SQG24383.1|836045_836855_+|PTS-system,-mannose-specific-IIC-component
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>LS483386.1|SQG24384.1|836851_837679_+|phospotransferase-system-(PTS),-enzyme-II-component-D
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>LS483386.1|SQG24385.1|837814_839464_+|two-component-sensor-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDELGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPSQGLLFASNPHLGNVFSKSVYIQEVLRAAHPPKTLFKVAMDSEDGHYLMIIKPMIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLAVPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE

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Crispr_ID: LS483386_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483386_2

1322716-1322809

Unclear

Consensus_repeat	Method
AATCCACTCACCCGTGAAGGGTGAGAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of LS483386_2

>merge|LS483386|2|1322716-1322809|CRISPRCasFinder
AATCCACTCACCCGTGAAGGGTGAGACCTAGTGGCTATGCGGAGTTACTTATCCAACTGATTATTTTAATCCACTCACCCGTGAAGGGTGAGAC

>LS483386|2|1|1322716-1322809|CRISPRCasFinder
AATCCACTCACCCGTGAAGGGTGAGAC	CTAGTGGCTATGCGGAGTTACTTATCCAACTGATTATTTT
AATCCACTCACCCGTGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483386.1\|SQG24858.1\|1315328_1317062_-\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483386.1\|SQG24857.1\|1314176_1315256_-\|cytoplasmic-protein	unknown	unknown	gnl\|CDD\|225197
LS483386.1\|SQG24856.1\|1314058_1314163_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483386.1\|SQG24865.1\|1323159_1324407_-\|ATP-dependent-RNA-helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483386.1\|SQG24863.1\|1320602_1321535_-\|magnesium-and-cobalt-transport-protein	unknown	unknown	gnl\|CDD\|213361
LS483386.1\|SQG24871.1\|1330540_1330867_-\|Uncharacterized-protein-conserved-in-bacteria	unknown	unknown	gnl\|CDD\|368511
LS483386.1\|SQG24872.1\|1331074_1331581_-\|hypothetical-membrane-spanning-protein	unknown	unknown	gnl\|CDD\|235163
LS483386.1\|SQG24867.1\|1327210_1327774_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|379082
LS483386.1\|SQG24874.1\|1332589_1333147_-\|lipoprotein	unknown	unknown	unknown
LS483386.1\|SQG24868.1\|1328374_1328770_-\|hypothetical-cytosolic-protein	unknown	unknown	gnl\|CDD\|181104
LS483386.1\|SQG24870.1\|1329354_1330491_-\|tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|271189
LS483386.1\|SQG24859.1\|1317058_1317799_-\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483386.1\|SQG24860.1\|1317886_1318993_-\|bifunctional-methionine-sulfoxide-reductase-A/B	unknown	unknown	gnl\|CDD\|184456
LS483386.1\|SQG24873.1\|1331803_1332565_-\|Immunoglobulin-A1-protease	unknown	unknown	gnl\|CDD\|273478
LS483386.1\|SQG24861.1\|1319035_1319659_-\|disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|239264
LS483386.1\|SQG24855.1\|1313446_1313980_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483386.1\|SQG24869.1\|1328787_1329042_-\|Aldose-1-epimerase	unknown	unknown	gnl\|CDD\|286073
LS483386.1\|SQG24864.1\|1321626_1322586_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|223745
LS483386.1\|SQG24862.1\|1319671_1320382_-\|cytochrome-c-type-biogenesis-protein	unknown	unknown	gnl\|CDD\|223856
LS483386.1\|SQG24866.1\|1324560_1327209_-\|valyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235582

Protein	Function_ID	Function_description	E-value
LS483386.1\|SQG24858.1\|1315328_1317062_-\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.08305e-64
LS483386.1\|SQG24857.1\|1314176_1315256_-\|cytoplasmic-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	2.00918e-35
LS483386.1\|SQG24856.1\|1314058_1314163_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	2.84005e-07
LS483386.1\|SQG24865.1\|1323159_1324407_-\|ATP-dependent-RNA-helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	5.35517e-59
LS483386.1\|SQG24863.1\|1320602_1321535_-\|magnesium-and-cobalt-transport-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.35313e-79
LS483386.1\|SQG24871.1\|1330540_1330867_-\|Uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|368511	pfam05595, DUF771, Domain of unknown function (DUF771). Family of uncharacterized ORFs found in Bacteriophage and Lactococcus lactis.	6.85209e-27
LS483386.1\|SQG24872.1\|1331074_1331581_-\|hypothetical-membrane-spanning-protein	gnl\|CDD\|235163	PRK03817, PRK03817, galactokinase; Provisional.	0.00885322
LS483386.1\|SQG24867.1\|1327210_1327774_-\|shikimate-kinase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00452424
LS483386.1\|SQG24868.1\|1328374_1328770_-\|hypothetical-cytosolic-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000143012
LS483386.1\|SQG24870.1\|1329354_1330491_-\|tyrosine-recombinase-XerC	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.21501e-33
LS483386.1\|SQG24859.1\|1317058_1317799_-\|two-component-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.85886e-83
LS483386.1\|SQG24860.1\|1317886_1318993_-\|bifunctional-methionine-sulfoxide-reductase-A/B	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	2.3863e-163
LS483386.1\|SQG24873.1\|1331803_1332565_-\|Immunoglobulin-A1-protease	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	0.00224312
LS483386.1\|SQG24861.1\|1319035_1319659_-\|disulfide-interchange-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.7195e-35
LS483386.1\|SQG24855.1\|1313446_1313980_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.40194e-80
LS483386.1\|SQG24869.1\|1328787_1329042_-\|Aldose-1-epimerase	gnl\|CDD\|286073	pfam08930, DUF1912, Domain of unknown function (DUF1912). This domain has no known function. It is found in various Streptococcal proteins.	3.74168e-47
LS483386.1\|SQG24864.1\|1321626_1322586_-\|oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.87701e-56
LS483386.1\|SQG24862.1\|1319671_1320382_-\|cytochrome-c-type-biogenesis-protein	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	6.4437e-43
LS483386.1\|SQG24866.1\|1324560_1327209_-\|valyl-tRNA-synthetase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0

>LS483386.1|SQG24864.1|1321626_1322586_-|oxidoreductase
MAKVRYGIVSTAQVAPRFIEGVRLAGNGEVVAVSSRSLDKAKAFAAAHQLPKAYGSLDDMLLDASIDAIYVASINQDHFPAAKKALLAGKHVLVEKPFTLTAAQAEELFALAQERGLFLMEAQKAVFIPMTQRLKGLIAAVELGDIVSVSSTTAYPNIDHVTWFRDLEKGGGTVHFMAPYALSYLPYLFDADIVSASGVAHFPKGQSDSQSKLVLTLSNGVLVDIFLTTHLSLPHELVIYGTKGRLEIPHFWKNTHATLVRPDGSRSVIEAIMSSDFEAEAHHVSQMILEGQLTSPVMTKSLTLSGVGLIEKLYRSWGK
>LS483386.1|SQG24863.1|1320602_1321535_-|magnesium-and-cobalt-transport-protein
MPTLPKASSAITLINLDQLTEHDQEALVSEGLIDAEVFDYAKDKNETSFMEENKEKLTIVFQILDRQEEAYHPNYIPRVIPITLFLNDQSLYILGHDHSLTLIEEVFPDLDESRSPRHLVFQLLTAFTKQYVPLMDEIAQQRDKLIEALRQKANKTNLESLANLQSGTVYILMGSKQNEQMLAELKDMPGQQDLEEDEAEQLRDAIIEARQLSNMCDLNTRVLKEISSSYNNVLSNNLNNNVTSLTIFSIGISIIAMVTSFYGMNVKLPFAKVDSVWFWIVLTTSLVALLIMVVMYWYVHKRNRNASKRI
>LS483386.1|SQG24862.1|1319671_1320382_-|cytochrome-c-type-biogenesis-protein
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFDKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LS483386.1|SQG24861.1|1319035_1319659_-|disulfide-interchange-protein
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMTDKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LS483386.1|SQG24860.1|1317886_1318993_-|bifunctional-methionine-sulfoxide-reductase-A/B
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKMIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>LS483386.1|SQG24859.1|1317058_1317799_-|two-component-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKDLGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>LS483386.1|SQG24858.1|1315328_1317062_-|two-component-sensor-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDRAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIEDSSLTNSQSLLTRGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>LS483386.1|SQG24857.1|1314176_1315256_-|cytoplasmic-protein
MSLASDYFSRQTPIVEKLMAYGFEKRNNGYFYNERFMEEEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETDIPNEGYRKNPNIDKLMRLRKCQQYEDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>LS483386.1|SQG24856.1|1314058_1314163_-|B3/4-domain-containing-protein
MVEFVADQSFWELFPGAKLGVVLLKDVQNQAESP
>LS483386.1|SQG24855.1|1313446_1313980_-|B3/4-domain-containing-protein
MVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPAGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALKFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>LS483386.1|SQG24865.1|1323159_1324407_-|ATP-dependent-RNA-helicase
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEIVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQVNEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLIKVDKRLFEFFIVAFNC
>LS483386.1|SQG24866.1|1324560_1327209_-|valyl-tRNA-synthetase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDNRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>LS483386.1|SQG24867.1|1327210_1327774_-|shikimate-kinase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTHLTAAETAQLIIQKMTHIKEN
>LS483386.1|SQG24868.1|1328374_1328770_-|hypothetical-cytosolic-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKDSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK
>LS483386.1|SQG24869.1|1328787_1329042_-|Aldose-1-epimerase
MSYEKEFLKDFEDWVKTQIQVNQLAMATSQEVAQEDGDERAKDAFIRYESKLDAYEFLLGKFDNYKNGKAFHDIPDELFGARHY
>LS483386.1|SQG24870.1|1329354_1330491_-|tyrosine-recombinase-XerC
MATYRQRGKKKLWDYRVYGKDGKLIASGSGFRTKKEASYEALKIEQKKYYSDVINSNATLFEMWQIWYDLVVEPSELDILTKQKYQARGKIIEKYLSDIPANRIKHSKYQEFIKFYGKNVTLNLMTCLNSDIRKVIIFFKRDGVLIEDFTEGVKIFGKPYRKSPEDKYLKSIEDYQKLLAYLKRIANYSDSIIPFFLFTMLQTGFRFGEAMAITWDDIDFERNSIYTYRRYSSIKKDFTKPKTRTSIRRVPVSHDLKELLLELKFQQERMLRGLHIKNTDQLIFYDYRFGMISNNAVNKFLASSLEKLEIESKMSSTGARHTYGSYLLANGVDIWAVAKLMGHKDIKQLIETYGHLLLEVEEKENDQLLKILNNKGSF
>LS483386.1|SQG24871.1|1330540_1330867_-|Uncharacterized-protein-conserved-in-bacteria
MQQVFNVSVPVPDDVVIISKEEYLDLLSDNEQGKWWDIDNLQELLGLGRSKLINDILLNPDIKKEVDLSINPNGFIVYPRGKGSRYKILATRARKYFEENFGSILLNN
>LS483386.1|SQG24872.1|1331074_1331581_-|hypothetical-membrane-spanning-protein
MLNYKYITLNDSYELNVWLDFVLRDLKKEEKYSKFRFIIKKLSIKNSRTTFQEIESVRKELMGLSELDLKHLRMIIENRETTGIGLEFKAFLQKIFNYFGVIVVGLIPVILGYNSIERVVTSWLNAKTFKSSILLIVWIFVLYIYYVVFKEFFLHDSKKEKLESICYF
>LS483386.1|SQG24873.1|1331803_1332565_-|Immunoglobulin-A1-protease
MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDAVVVPVSPQPTTPIEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTRDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK
>LS483386.1|SQG24874.1|1332589_1333147_-|lipoprotein
MKIRKVIIVMLAVALSLGFYRLYHRQKPSQLIEANQEILVKPITPNKSKIKVKRNVAKEAKATLEMPEERVNEKEAKQVKSAIVIPIDYLASISSQDDIKVTYDNKLSITNPAMAASIKTMLLAGYHFDLDSLTVYQSNSDNVYQFTILLVTHQQDQLSLVGNYVTGTGQFEFVSLHGTPKNVMF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483386_2	2.1\|1322743\|40\|LS483386\|CRISPRCasFinder	1322743-1322782	40	MK448679	Streptococcus phage Javan137, complete genome	35066-35105	8	0.8
LS483386_2	2.1\|1322743\|40\|LS483386\|CRISPRCasFinder	1322743-1322782	40	MK448950	Streptococcus phage Javan464, complete genome	37224-37263	9	0.775

1. spacer 2.1|1322743|40|LS483386|CRISPRCasFinder matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 8, identity: 0.8

ctagtggctatgcggagttacttatccaactgattatttt	CRISPR spacer
ctagtggctatgcggagttacttatccaaattatcgagga	Protospacer
***************************** * **..

2. spacer 2.1|1322743|40|LS483386|CRISPRCasFinder matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 9, identity: 0.775

ctagtggctatgcggagttacttatccaactgattatttt	CRISPR spacer
cgagtggctatgcggagttgcttatccaactaatcgagga	Protospacer
* *****************.***********.**..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36590 : 48950

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG23189.1\|36590_40364_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	2.1e-40	26.8
SQG23191.1\|40524_41979_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.3e-54	33.3
SQG23192.1\|42006_43029_+	phosphoribosylaminoimidazole synthetase	R9TMC7	Synechococcus_phage	4.0e-63	41.5
SQG23193.1\|43196_43751_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
SQG23195.1\|43934_45482_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
SQG23196.1\|45538_46663_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQG23197.1\|46825_48181_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQG23198.1\|48338_48950_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	3.6e-19	43.1

DBSCAN-SWA_2

183917 : 205047

Shigella_phage(33.33%)

transposase,integrase,tRNA,bacteriocin

attL 177367:177380|attR 186778:186791

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
177367:177380	attL	NA	NA	NA	NA
SQG23544.1\|183917_184139_-\|transposase	transposase	U5P429	Shigella_phage	1.9e-10	44.3
SQG23548.1\|184178_184349_-\|integrase	integrase	U5P429	Shigella_phage	5.7e-07	44.4
SQG23550.1\|184780_185074_-\|transposase	transposase	NA	NA	NA	NA
SQG23558.1\|185151_186462_-	membrane protein	NA	NA	NA	NA
SQG23564.1\|186685_187558_+	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA
186778:186791	attR	NA	NA	NA	NA
SQG23570.1\|187857_188664_-\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	4.1e-63	49.6
SQG23572.1\|188684_189200_-\|transposase	transposase	NA	NA	NA	NA
SQG23573.1\|189285_190149_-	membrane protein	NA	NA	NA	NA
SQG23575.1\|190367_191510_+\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.8e-86	43.9
SQG23576.1\|191726_192038_+	helper of Tim protein 13	NA	NA	NA	NA
SQG23577.1\|192041_192581_+	biotin transporter	NA	NA	NA	NA
SQG23578.1\|192720_193500_+	metal-dependent hydrolase	NA	NA	NA	NA
SQG23579.1\|193499_194015_+\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
SQG23581.1\|194628_195849_-	S-layer protein	NA	NA	NA	NA
SQG23582.1\|196335_196713_-	Uncharacterised protein	NA	NA	NA	NA
SQG23583.1\|196905_197238_+	regulatory protein	NA	NA	NA	NA
SQG23584.1\|197246_197984_+	RevS	A0A2H4J4Z6	uncultured_Caudovirales_phage	1.0e-12	24.2
SQG23586.1\|197983_199327_+	putative sensor histidine kinase BlpH	NA	NA	NA	NA
SQG23587.1\|199397_199541_-	Uncharacterised protein	NA	NA	NA	NA
SQG23588.1\|199940_200054_+	Uncharacterised protein	NA	NA	NA	NA
SQG23589.1\|201025_203176_+	ABC transporter CbaT	W8CYL7	Bacillus_phage	4.2e-46	29.8
SQG23590.1\|203184_204546_+	transport protein ComB	NA	NA	NA	NA
SQG23592.1\|204687_204861_+	Uncharacterised protein	NA	NA	NA	NA
SQG23593.1\|204879_205047_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA

DBSCAN-SWA_3

344792 : 405114

Streptococcus_phage(35.0%)

tRNA,transposase,protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG23906.1\|344792_345383_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.6e-54	55.7
SQG23907.1\|345874_346150_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQG23908.1\|346398_347034_+	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4
SQG23909.1\|347051_347927_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-68	46.6
SQG23910.1\|348589_348913_+	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQG23911.1\|348917_349781_+	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	3.8e-115	74.7
SQG23912.1\|349807_350200_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQG23913.1\|350246_350876_-	copper homeostasis protein	NA	NA	NA	NA
SQG23914.1\|351175_351532_+	arsenate reductase	M1PLC0	Streptococcus_phage	6.3e-40	65.8
SQG23915.1\|351605_352433_-	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	3.8e-128	79.5
SQG23916.1\|352666_353848_+	L-lactate oxidase	NA	NA	NA	NA
SQG23917.1\|354113_359051_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA
SQG23918.1\|359823_360531_+	permease	NA	NA	NA	NA
SQG23919.1\|360773_362771_+\|tRNA	methionyl-tRNA synthetase	A0A1V0SHR2	Klosneuvirus	3.0e-86	35.0
SQG23920.1\|363265_364279_+	ribonucleotide-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	5.5e-97	53.4
SQG23921.1\|364282_364771_+	nrdI protein	R4JF54	Bacillus_phage	1.3e-11	37.5
SQG23922.1\|364737_366918_+	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.5e-171	43.3
SQG23923.1\|367122_367875_-	ADP-ribosyltransferase	NA	NA	NA	NA
SQG23924.1\|368333_368807_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQG23925.1\|369253_369658_+	Uncharacterised protein	NA	NA	NA	NA
SQG23926.1\|370386_371301_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	4.8e-76	50.3
SQG23927.1\|371792_372248_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQG23928.1\|372491_372743_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQG23929.1\|372837_373503_-	phage protein	NA	NA	NA	NA
SQG23930.1\|374194_375163_-	Protein of uncharacterised function (DUF3644)	A0A0N9RUA4	Staphylococcus_phage	7.6e-88	52.0
SQG23931.1\|375886_376123_+	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA
SQG23932.1\|376115_376814_+	3-ketoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	6.0e-10	24.8
SQG23933.1\|376889_377849_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
SQG23934.1\|378181_379519_+	phosphoglycerate transporter protein	NA	NA	NA	NA
SQG23935.1\|379691_381074_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A2K9L4K9	Tupanvirus	8.5e-32	36.0
SQG23936.1\|381104_381659_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA
SQG23937.1\|381658_381910_+	membrane protein	NA	NA	NA	NA
SQG23938.1\|381929_382625_+	MTA/SAH nucleosidase	NA	NA	NA	NA
SQG23939.1\|382775_383117_+	Uncharacterised protein	NA	NA	NA	NA
SQG23940.1\|383215_383863_-	metalloregulator ScaR	NA	NA	NA	NA
SQG23941.1\|384008_384941_+	manganese-binding protein	NA	NA	NA	NA
SQG23942.1\|385004_385730_+	manganese transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.1e-17	32.6
SQG23943.1\|385730_386585_+	ABC 3 transport family protein	NA	NA	NA	NA
SQG23944.1\|386732_387539_-	cyclophilin type peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
SQG23945.1\|387755_390161_+	cell division protein FtsK	S5VNE3	Mycobacterium_phage	2.9e-88	51.7
SQG23946.1\|390230_390584_-	integral membrane protein	NA	NA	NA	NA
SQG23947.1\|390827_391253_+	50S ribosomal protein L11	NA	NA	NA	NA
SQG23948.1\|391358_392048_+	50S ribosomal protein L1	NA	NA	NA	NA
SQG23949.1\|392369_393098_+	uridylate kinase	NA	NA	NA	NA
SQG23950.1\|393126_393684_+	ribosome recycling factor	NA	NA	NA	NA
SQG23951.1\|393792_394650_+	s1 RNA binding domain	NA	NA	NA	NA
SQG23952.1\|394722_395232_+	methionine sulfoxide reductase A	NA	NA	NA	NA
SQG23953.1\|395228_395444_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQG23954.1\|395599_396775_+	lysM domain protein	A0A0E3XB61	Gordonia_phage	5.5e-16	40.5
SQG23955.1\|397089_398862_+	myosin-cross-reactive antigen	NA	NA	NA	NA
SQG23956.1\|399020_400073_+	phosphate starvation-induced protein	W8D063	Erwinia_phage	6.0e-46	49.5
SQG23957.1\|400118_400694_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA
SQG23958.1\|400852_401350_+\|protease	metalloprotease	NA	NA	NA	NA
SQG23959.1\|401330_401738_+	diacylglycerol kinase	NA	NA	NA	NA
SQG23960.1\|401857_402754_+	GTP-binding protein Era	NA	NA	NA	NA
SQG23961.1\|402774_403251_+	phosphohydrolase	NA	NA	NA	NA
SQG23962.1\|403557_403812_-	Uncharacterised protein	NA	NA	NA	NA
SQG23963.1\|404209_404344_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQG23964.1\|404444_404627_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQG23965.1\|404964_405114_-\|transposase	IS1191 transposase	NA	NA	NA	NA

DBSCAN-SWA_4

537419 : 642270

109

Temperate_phage(42.86%)

tRNA,transposase,terminase,head,protease,bacteriocin,tail,integrase,capsid

attL 534102:534119|attR 616378:616395

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
534102:534119	attL	NA	NA	NA	NA
SQG24096.1\|537419_538766_+\|tRNA	asparaginyl-tRNA synthetase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8
SQG24097.1\|539180_540071_+	P-loop ATPase protein family protein	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
SQG24098.1\|540067_541045_+	transporter	A1IMD5	Streptococcus_phage	6.6e-140	74.8
SQG24099.1\|541041_541953_+	sporulation Regulator WhiA C terminal domain-containing protein	Q7AWZ3	Streptococcus_phage	3.8e-105	64.6
SQG24100.1\|542084_543482_+	dipeptidase	NA	NA	NA	NA
SQG24101.1\|543633_545181_+	high-affinity zinc uptake system protein	NA	NA	NA	NA
SQG24102.1\|545327_546050_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQG24103.1\|546068_547268_+	tagatose-6-phosphate ketose/aldose isomerase	NA	NA	NA	NA
SQG24104.1\|547364_547625_-	50S ribosomal protein L31	NA	NA	NA	NA
SQG24105.1\|547739_548681_-	DHH family protein	NA	NA	NA	NA
SQG24106.1\|549074_549524_+	flavodoxin	NA	NA	NA	NA
SQG24107.1\|549698_549983_+	chorismate mutase	NA	NA	NA	NA
SQG24108.1\|549975_551238_+	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	6.4e-95	51.3
SQG24109.1\|551352_551700_+	50S ribosomal protein L19	NA	NA	NA	NA
SQG24110.1\|552062_553139_-\|integrase	prophage LambdaSa1, site-specific recombinase phage integrase family protein	Q0R5B4	Streptococcus_phage	7.5e-68	41.2
SQG24111.1\|553257_553779_-	phage protein	Q938N8	Temperate_phage	7.5e-66	97.7
SQG24112.1\|553789_554167_-	cI-like repressor	A0A1P8VVK5	Streptococcus_phage	8.1e-54	76.8
SQG24113.1\|554150_554510_-	Transcriptional regulator, MerR family	A0A1P8VVN3	Streptococcus_phage	1.7e-56	95.0
SQG24114.1\|554697_554916_+	Transcriptional regulator, Cro family	A0A1P8VVR5	Streptococcus_phage	5.9e-33	97.2
SQG24115.1\|555015_555246_+	Uncharacterised protein	NA	NA	NA	NA
SQG24116.1\|555229_555340_+	phage protein	A0A1P8VVR9	Streptococcus_phage	4.3e-08	84.8
SQG24117.1\|555382_555601_+	phage protein	NA	NA	NA	NA
SQG24118.1\|555602_555845_+	Uncharacterised protein	NA	NA	NA	NA
SQG24119.1\|555831_557148_+	chromosome segregation ATPases	A0A097BY67	Enterococcus_phage	7.8e-152	63.8
SQG24120.1\|557162_558245_+	phage protein	A0A0K2CZH1	Paenibacillus_phage	2.5e-103	53.3
SQG24121.1\|558283_558418_+	phage protein	NA	NA	NA	NA
SQG24122.1\|558439_559033_+	phage protein	A0A097BY29	Enterococcus_phage	1.7e-29	43.5
SQG24123.1\|559032_560616_+	DNA/RNA helicase	A0A097BY72	Enterococcus_phage	2.0e-234	77.8
SQG24124.1\|560628_560823_+	Uncharacterised protein	NA	NA	NA	NA
SQG24125.1\|560845_562216_+	ATPase	Q5YA88	Bacillus_phage	4.7e-184	67.6
SQG24126.1\|562203_563088_+	ATPase	Q5YA88	Bacillus_phage	1.5e-87	57.6
SQG24127.1\|563379_563562_+	Uncharacterised protein	NA	NA	NA	NA
SQG24128.1\|563554_563950_+	phage protein	Q5YA86	Bacillus_phage	1.8e-40	58.8
SQG24129.1\|563946_564171_+	phage associated protein	NA	NA	NA	NA
SQG24130.1\|564173_564359_+	phage protein	A3F626	Streptococcus_phage	6.6e-09	82.9
SQG24131.1\|564355_564607_+	phage protein	NA	NA	NA	NA
SQG24132.1\|564590_564995_+	phage protein	A3F627	Streptococcus_phage	1.6e-39	65.2
SQG24133.1\|564991_565276_+	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.4e-37	89.4
SQG24134.1\|565277_565910_+	phage protein	L0P368	Streptococcus_phage	2.3e-85	68.6
SQG24135.1\|565912_566623_+	phage protein	Q938L9	Temperate_phage	3.0e-25	46.2
SQG24136.1\|566619_566991_+	Uncharacterised protein	NA	NA	NA	NA
SQG24137.1\|567258_567696_+	phage protein	A0A097PBF1	Streptococcus_pyogenes_phage	1.4e-76	99.3
SQG24138.1\|568552_569071_+	Chromosome partitioning protein parB	Q938L7	Temperate_phage	1.5e-90	100.0
SQG24139.1\|569049_569727_+	hypothetical amino acid ABC transporter ATP-binding protein	Q938L6	Temperate_phage	4.3e-130	99.6
SQG24140.1\|570179_570557_+	phage transcriptional regulator	Q938L5	Temperate_phage	1.7e-67	100.0
SQG24141.1\|570607_571081_+	phage protein	Q938L4	Temperate_phage	7.3e-76	98.7
SQG24142.1\|571163_572375_+\|terminase	phage terminase	Q938L3	Temperate_phage	3.7e-225	99.7
SQG24143.1\|572388_573891_+\|capsid	Minor capsid protein	Q938L2	Temperate_phage	5.4e-282	100.0
SQG24144.1\|573895_575374_+\|capsid	capsid protein	Q938L1	Temperate_phage	8.2e-275	100.0
SQG24145.1\|575345_575585_+	phage protein	Q938L0	Temperate_phage	2.8e-36	100.0
SQG24146.1\|575646_575913_+	secreted phage protein	Q938K9	Temperate_phage	1.5e-38	100.0
SQG24147.1\|576044_576653_+	phage protein	Q938K8	Temperate_phage	1.3e-96	100.0
SQG24148.1\|576656_577475_+\|head	putative major head protein	Q79S85	Temperate_phage	4.0e-146	100.0
SQG24149.1\|577528_577945_+	phage protein	Q938K7	Temperate_phage	1.1e-56	100.0
SQG24150.1\|577907_578267_+\|capsid	minor capsid protein - phage associated	Q79S86	Temperate_phage	1.0e-58	100.0
SQG24151.1\|578266_578623_+	phage protein	Q79S88	Temperate_phage	4.5e-62	100.0
SQG24152.1\|578619_579018_+\|capsid	minor capsid protein	Q79S87	Temperate_phage	3.5e-71	100.0
SQG24153.1\|579017_579503_+\|tail	major tail shaft protein	Q938K6	Temperate_phage	1.6e-86	100.0
SQG24154.1\|579541_579976_+	phage protein	Q938K5	Temperate_phage	2.6e-72	100.0
SQG24155.1\|579979_580561_+	bacteriophage Gp15 family protein	Q938K4	Temperate_phage	4.9e-106	99.5
SQG24156.1\|580550_583811_+	phage protein	Q938K3	Temperate_phage	0.0e+00	99.5
SQG24157.1\|583807_584524_+	phage protein	Q938K2	Temperate_phage	2.9e-137	100.0
SQG24158.1\|584520_586668_+	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	95.4
SQG24159.1\|586664_587879_+	phage protein	A3F657	Streptococcus_phage	5.0e-44	49.5
SQG24160.1\|587880_588195_+	phage protein	NA	NA	NA	NA
SQG24161.1\|588205_590095_+	phage protein	Q938J9	Temperate_phage	1.8e-189	74.3
SQG24162.1\|590106_590535_+	phage protein	Q938J8	Temperate_phage	8.1e-58	84.3
SQG24163.1\|590537_591170_+	phage protein	Q938J7	Temperate_phage	2.0e-44	49.5
SQG24164.1\|591181_591454_+	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQG24165.1\|591450_591678_+	phage protein	A7J2B3	Streptococcus_phage	7.6e-31	98.7
SQG24166.1\|591686_591797_+	phage membrane protein	A7J2B4	Streptococcus_phage	1.8e-09	97.2
SQG24167.1\|591793_593002_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	2.9e-214	87.5
SQG24168.1\|593111_594092_-	Sdn	A7J2B8	Streptococcus_phage	1.3e-167	99.7
SQG24169.1\|594330_594510_+	Paratox	A3F673	Streptococcus_phage	3.4e-18	77.6
SQG24170.1\|594455_594572_+	Uncharacterised protein	NA	NA	NA	NA
SQG24171.1\|595355_595925_+	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA
SQG24172.1\|595925_597878_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	1.2e-143	46.3
SQG24173.1\|598234_599959_+	septation ring formation regulator	NA	NA	NA	NA
SQG24174.1\|600090_600549_-	hypothetical cytosolic protein	W6LLD2	Streptococcus_phage	3.9e-18	39.1
SQG24175.1\|600775_602083_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	1.2e-240	96.6
SQG24176.1\|602671_603130_-\|transposase	transposase	A0A1X9I619	Streptococcus_phage	2.1e-64	83.4
SQG24177.1\|603717_605259_-	MgaA-like transcriptional regulator	NA	NA	NA	NA
SQG24178.1\|605730_612153_+	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA
SQG24179.1\|613016_613178_+\|bacteriocin	bacteriocin protoxin, streptolysin S family protein	NA	NA	NA	NA
SQG24180.1\|613399_614350_+	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA
SQG24181.1\|614346_615405_+\|bacteriocin	bacteriocin biosynthesis cyclodehydratase	NA	NA	NA	NA
SQG24182.1\|615424_616783_+\|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	NA	NA	NA	NA
616378:616395	attR	NA	NA	NA	NA
SQG24183.1\|616757_617429_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQG24184.1\|617425_618109_+	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA
SQG24185.1\|618131_619055_+	ABC transporter family protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.7e-33	38.1
SQG24186.1\|619063_620191_+	ABC transporter	NA	NA	NA	NA
SQG24187.1\|620187_621306_+	ABC transporter	NA	NA	NA	NA
SQG24188.1\|621876_624609_+	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA
SQG24189.1\|625580_627539_+	NAD-dependent DNA ligase	A0A0K2QQN8	Ralstonia_phage	9.9e-103	34.9
SQG24190.1\|627552_628575_+	lipid kinase	A0A1V0SBJ0	Catovirus	3.6e-19	27.9
SQG24191.1\|628967_629165_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
SQG24192.1\|629199_629916_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
SQG24193.1\|629933_630428_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
SQG24194.1\|630427_630964_+	ATP synthase delta chain	NA	NA	NA	NA
SQG24195.1\|630979_632488_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
SQG24196.1\|632503_633379_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
SQG24197.1\|633540_634947_+	ATP synthase F0F1 subunit beta	NA	NA	NA	NA
SQG24198.1\|634959_635376_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
SQG24199.1\|635641_635899_+	membrane protein	NA	NA	NA	NA
SQG24200.1\|635963_637235_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQG24201.1\|637238_637427_+	epuA protein	NA	NA	NA	NA
SQG24202.1\|637462_638329_+	DNA-entry nuclease	NA	NA	NA	NA
SQG24203.1\|638611_639655_+\|tRNA	phenylalanyl-tRNA synthetase alpha subunit	A0A2K9L3A8	Tupanvirus	4.6e-30	34.3
SQG24204.1\|639864_642270_+\|tRNA	phenylalanyl-tRNA synthetase subunit beta	NA	NA	NA	NA

DBSCAN-SWA_5

677679 : 688283

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG24237.1\|677679_679890_-	phosphoglycerol transferase	W6LM83	Streptococcus_phage	6.5e-268	68.9
SQG24238.1\|679997_681161_+	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQG24239.1\|681157_681844_+	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQG24240.1\|681937_683104_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
SQG24241.1\|683164_683506_+	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	2.6e-19	41.1
SQG24242.1\|683727_685080_+	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	5.9e-30	24.7
SQG24243.1\|685167_686436_-	folylpolyglutamate synthase	NA	NA	NA	NA
SQG24244.1\|686465_686906_-	membrane protein	NA	NA	NA	NA
SQG24245.1\|687140_688283_+	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	1.4e-24	27.3

DBSCAN-SWA_6

715228 : 752891

Bacillus_phage(23.08%)

tRNA,transposase,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG24270.1\|715228_715960_+\|tRNA	tRNA (guanine-N(1)-)-methyltransferase	NA	NA	NA	NA
SQG24271.1\|715959_716952_+	thioredoxin reductase	Q9JRK7	Streptococcus_phage	8.2e-29	54.9
SQG24272.1\|717129_718188_+	regulatory protein	NA	NA	NA	NA
SQG24273.1\|718200_719124_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
SQG24274.1\|719424_720093_+	deoR-like helix-turn-helix domain-containing protein	A0A077SK06	Escherichia_phage	4.8e-17	32.7
SQG24275.1\|720089_721001_+	1-phosphofructokinase	NA	NA	NA	NA
SQG24276.1\|720997_722944_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA
SQG24277.1\|723042_723636_+	N-acetylmuramidase	A0A249Y0X5	Enterococcus_phage	3.5e-11	33.8
SQG24278.1\|723787_724495_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	Q332B8	Clostridium_botulinum_C_phage	6.5e-12	36.4
SQG24279.1\|724650_724770_-\|transposase	degenerate transposase	NA	NA	NA	NA
SQG24280.1\|725066_725741_-	exotoxin J	NA	NA	NA	NA
SQG24281.1\|725905_726652_-	Exotoxin type C precursor	Q938J1	Temperate_phage	4.0e-113	82.4
SQG24282.1\|726771_727791_-\|protease	igG-degrading protease	NA	NA	NA	NA
SQG24283.1\|728293_728470_+	nucleoside diphosphate kinase	NA	NA	NA	NA
SQG24284.1\|728697_729078_+\|transposase	transposase	NA	NA	NA	NA
SQG24285.1\|729077_729926_+	degV family protein	NA	NA	NA	NA
SQG24286.1\|730050_731259_+\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	5.3e-38	45.0
SQG24287.1\|731255_733133_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.5e-63	31.5
SQG24288.1\|734024_734435_+	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQG24289.1\|734515_736528_-	5'-nucleotidase	NA	NA	NA	NA
SQG24290.1\|736747_737398_+	GTP pyrophosphokinase	NA	NA	NA	NA
SQG24291.1\|737400_738069_+	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQG24292.1\|738077_739310_+	two component system histidine kinase	NA	NA	NA	NA
SQG24293.1\|739603_740482_+	mevalonate kinase	NA	NA	NA	NA
SQG24294.1\|740463_741408_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQG24295.1\|741400_742414_+	phosphomevalonate kinase	NA	NA	NA	NA
SQG24296.1\|742400_743390_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQG24297.1\|743619_744897_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQG24298.1\|744883_746059_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQG24299.1\|746267_747107_+	thymidylate synthase	U5J9N5	Bacillus_phage	1.7e-83	53.2
SQG24300.1\|747186_747684_+	dihydrofolate reductase	W5QU76	Bacillus_phage	1.1e-10	34.4
SQG24301.1\|747703_747874_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQG24302.1\|748003_749233_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.8e-138	60.5
SQG24303.1\|749242_749842_+	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
SQG24304.1\|749989_750739_+	virulence factor relevant regulator	NA	NA	NA	NA
SQG24305.1\|750791_752891_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	3.0e-121	39.2

DBSCAN-SWA_7

987986 : 1063449

Streptococcus_phage(58.46%)

portal,tRNA,protease,terminase,tail,integrase

attL 1021338:1021397|attR 1063492:1063587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG24532.1\|987986_988871_-\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
SQG24533.1\|988986_990327_-	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA
SQG24534.1\|990423_991380_-	membrane protein	NA	NA	NA	NA
SQG24535.1\|991390_991987_-	type I restriction-modification system specificty subunit	NA	NA	NA	NA
SQG24536.1\|992078_994715_-	permease family protein	NA	NA	NA	NA
SQG24537.1\|994729_995431_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	37.0
SQG24538.1\|995548_996091_+	bacterial regulatory s, tetR family protein	NA	NA	NA	NA
SQG24539.1\|996233_996875_-	bacterial regulatory s, gntR family protein	NA	NA	NA	NA
SQG24540.1\|997037_997526_-	general stress protein, Gls24 family	NA	NA	NA	NA
SQG24541.1\|997536_997737_-	csbD-like family protein	J7KJ36	Streptococcus_phage	1.8e-07	51.5
SQG24542.1\|997777_998317_-	response regulator	NA	NA	NA	NA
SQG24543.1\|998329_998518_-	membrane protein	NA	NA	NA	NA
SQG24544.1\|998528_999116_-	membrane protein	NA	NA	NA	NA
SQG24545.1\|999176_999425_-	transglycosylase associated family protein	NA	NA	NA	NA
SQG24546.1\|999787_1002106_-	DNA helicase II / ATP-dependent DNA helicase PcrA	A7KV33	Bacillus_phage	2.3e-130	40.9
SQG24547.1\|1002634_1003957_+	amino acid symporter	NA	NA	NA	NA
SQG24548.1\|1004076_1005312_+	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
SQG24549.1\|1005681_1006455_-	protein B	NA	NA	NA	NA
SQG24550.1\|1006823_1007660_-	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA
SQG24551.1\|1007675_1008305_-	histidine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-27	35.5
SQG24552.1\|1008314_1008956_-	histidine transporter permease	NA	NA	NA	NA
SQG24553.1\|1009062_1009398_-	phosphonoacetate hydrolase	NA	NA	NA	NA
SQG24554.1\|1009593_1011408_-	glucosamine-fructose-6-phosphate aminotransferase	A7IW18	Paramecium_bursaria_Chlorella_virus	6.8e-98	38.6
SQG24555.1\|1011583_1012141_-	signal peptidase I	NA	NA	NA	NA
SQG24556.1\|1012358_1013861_-	pyruvate kinase	NA	NA	NA	NA
SQG24557.1\|1013923_1014937_-	6-phosphofructokinase	NA	NA	NA	NA
SQG24558.1\|1015016_1018127_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	8.3e-120	29.9
SQG24559.1\|1018311_1018683_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQG24560.1\|1018682_1019381_+	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQG24561.1\|1019390_1020176_+	ABC transporter permease protein	NA	NA	NA	NA
SQG24562.1\|1020302_1020917_-	membrane protein	M1Q152	Streptococcus_phage	4.0e-50	51.8
1021338:1021397	attL	NA	NA	NA	NA
SQG24563.1\|1021507_1021696_-	phage protein	A3F673	Streptococcus_phage	2.1e-18	76.3
SQG24564.1\|1021935_1022694_+	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA
SQG24565.1\|1022804_1023512_+	exotoxin type C	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1
SQG24566.1\|1023587_1024922_-	Phage lysin, N-acetylmuramoyl-L-alanine amidase	Q5MY96	Streptococcus_phage	1.3e-247	93.0
SQG24567.1\|1024922_1025030_-	phage membrane protein	A7J2B4	Streptococcus_phage	5.5e-08	97.1
SQG24568.1\|1025033_1025219_-	phage protein	Q938J5	Temperate_phage	6.6e-25	96.7
SQG24569.1\|1025215_1025512_-	phage protein	Q938J6	Temperate_phage	3.7e-46	98.0
SQG24570.1\|1025522_1026140_-	phage protein	A3F662	Streptococcus_phage	9.8e-89	94.6
SQG24571.1\|1026142_1026304_-	phage protein	NA	NA	NA	NA
SQG24572.1\|1026317_1028213_-	phage protein	Q938J9	Temperate_phage	5.9e-76	52.5
SQG24573.1\|1028223_1028538_-	phage protein	NA	NA	NA	NA
SQG24574.1\|1028539_1029754_-	phage protein	A3F657	Streptococcus_phage	5.0e-44	49.5
SQG24575.1\|1029750_1031898_-	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	94.7
SQG24576.1\|1031894_1032602_-	phage protein	Q938K2	Temperate_phage	1.7e-92	70.6
SQG24577.1\|1032601_1036525_-\|tail	phage tail protein	J7KDT4	Streptococcus_phage	2.6e-243	49.1
SQG24578.1\|1036734_1037061_-	phage protein	J7KK85	Streptococcus_phage	6.4e-39	75.0
SQG24579.1\|1037113_1037725_-\|tail	major tail protein	J7KKC8	Streptococcus_phage	1.8e-74	73.0
SQG24580.1\|1037741_1038167_-	phage protein	J7KBZ9	Streptococcus_phage	2.9e-68	85.8
SQG24581.1\|1038163_1038541_-	phage protein	J7KDM3	Streptococcus_phage	1.8e-45	73.6
SQG24582.1\|1038537_1038885_-	phage protein	J7KJ42	Streptococcus_phage	2.1e-48	84.5
SQG24583.1\|1038881_1039184_-	phage protein	J7KC36	Streptococcus_phage	2.6e-42	87.8
SQG24584.1\|1039328_1040513_-	phage protein	J7KJ82	Streptococcus_phage	1.2e-162	76.1
SQG24585.1\|1040536_1041202_-\|protease	phage ClpP protease	M1Q115	Streptococcus_phage	5.4e-93	78.6
SQG24586.1\|1041179_1042400_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	3.4e-186	81.7
SQG24587.1\|1042433_1042658_-	phage protein	Q938K9	Temperate_phage	3.6e-17	61.4
SQG24588.1\|1042650_1042821_-	phage protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
SQG24589.1\|1042817_1044572_-\|terminase	phage terminase, large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.2
SQG24590.1\|1044586_1045054_-\|terminase	phage terminase, small subunit	J7KC46	Streptococcus_phage	3.9e-82	98.7
SQG24591.1\|1045221_1045563_-	Phage endonuclease	J7KH36	Streptococcus_phage	2.5e-54	90.7
SQG24592.1\|1046025_1046460_-	autolysin regulatory protein	J7KDQ1	Streptococcus_phage	6.2e-74	97.9
SQG24593.1\|1046740_1047376_-	phage protein	L0P368	Streptococcus_phage	2.0e-89	69.4
SQG24594.1\|1047377_1047662_-	phage protein	A0A097PAV1	Streptococcus_pyogenes_phage	2.8e-38	88.3
SQG24595.1\|1047658_1048072_-	phage protein	Q938M1	Temperate_phage	6.4e-36	65.2
SQG24596.1\|1048081_1048351_-	phage protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
SQG24597.1\|1048347_1048632_-	phage protein	A0A1P8VVP5	Streptococcus_phage	7.0e-50	100.0
SQG24598.1\|1048625_1048877_-	phage protein	A0A1P8VVV4	Streptococcus_phage	8.9e-41	94.0
SQG24599.1\|1048873_1049230_-	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	2.9e-61	100.0
SQG24600.1\|1049213_1049564_-	phage protein	A0A1P8VVL5	Streptococcus_phage	9.9e-46	88.5
SQG24601.1\|1049517_1050387_-	phage protein	A0A1P8BME8	Lactococcus_phage	5.8e-103	65.6
SQG24602.1\|1050655_1052209_-	bacteriophage resistance protein	A0A1P8BM51	Lactococcus_phage	5.7e-210	70.6
SQG24603.1\|1052226_1052709_-	phage protein	A0A1P8BM40	Lactococcus_phage	9.7e-60	70.7
SQG24604.1\|1052713_1054078_-	DEAD/DEAH box helicase	A0A1P8BMH7	Lactococcus_phage	3.8e-194	72.3
SQG24605.1\|1054152_1054836_-	phage protein	J7KC09	Streptococcus_phage	9.4e-125	99.1
SQG24606.1\|1054832_1055117_-	phage protein	NA	NA	NA	NA
SQG24607.1\|1055113_1055308_-	phage protein	J7KK69	Streptococcus_phage	3.9e-12	54.2
SQG24608.1\|1055307_1055637_-	phage protein	J7KBZ0	Streptococcus_phage	7.9e-13	41.8
SQG24609.1\|1055620_1055734_-	Uncharacterised protein	A0A097PAT6	Streptococcus_pyogenes_phage	2.0e-08	77.8
SQG24610.1\|1055717_1055855_-	phage protein	A0A097PAR2	Streptococcus_pyogenes_phage	3.4e-18	100.0
SQG24611.1\|1055851_1056148_-	phage protein	A0A097PAT8	Streptococcus_pyogenes_phage	3.1e-48	98.0
SQG24612.1\|1056226_1056412_-	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQG24613.1\|1056578_1056818_+	phage protein	NA	NA	NA	NA
SQG24614.1\|1056967_1057177_+	phage protein	NA	NA	NA	NA
SQG24615.1\|1057135_1057381_-	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	1.2e-34	95.1
SQG24616.1\|1057435_1057945_+	phage protein	NA	NA	NA	NA
SQG24617.1\|1058052_1058280_-	phage protein	A0A141E1R7	Streptococcus_phage	2.9e-14	57.3
SQG24618.1\|1058353_1058740_+	phage protein	A0A097PAT1	Streptococcus_pyogenes_phage	1.2e-65	100.0
SQG24619.1\|1058728_1058938_-	phage protein	A0A097PAQ9	Streptococcus_pyogenes_phage	1.7e-32	100.0
SQG24620.1\|1058991_1059591_+	phage protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
SQG24621.1\|1059620_1059779_-	phage membrane protein	J7KH24	Streptococcus_phage	8.4e-21	90.4
SQG24622.1\|1059837_1060053_+	Uncharacterised protein	J7KBX0	Streptococcus_phage	2.5e-28	95.7
SQG24623.1\|1060038_1060188_-	Uncharacterised protein	J7KH12	Streptococcus_phage	4.3e-19	91.8
SQG24624.1\|1060545_1061289_+	phage transcriptional repressor	A0A1S5S8T5	Streptococcus_phage	7.4e-75	62.5
SQG24625.1\|1061301_1062111_+	phage protein	J7KDP1	Streptococcus_phage	2.9e-24	35.8
SQG24626.1\|1062167_1062320_-	phage protein	NA	NA	NA	NA
SQG24627.1\|1062360_1063449_+\|integrase	integrase	Q38159	Streptococcus_phage	3.0e-202	98.6
1063492:1063587	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1845933 : 1866158

Streptococcus_phage(56.25%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG25325.1\|1845933_1847154_-	transporter	A0A2H4PQR6	Staphylococcus_phage	3.5e-05	23.6
SQG25326.1\|1847164_1849147_-	DNA mismatch repair protein	A0A1B2LRQ5	Wolbachia_phage	3.0e-62	30.1
SQG25327.1\|1849241_1850387_-	DNA integration/recombination/inversion protein	A0A1X9I5Y5	Streptococcus_phage	3.5e-84	44.9
SQG25328.1\|1851646_1852414_-	repressor protein	Q76TK4	Streptococcus_pyogenes_phage	3.6e-72	83.1
SQG25329.1\|1852567_1852774_+	Cro/CI family phage transcriptional regulator	X2KUC2	Streptococcus_phage	2.4e-07	47.0
SQG25330.1\|1852807_1853008_+	phage transcriptional repressor	A0A1S5SE31	Streptococcus_phage	3.4e-11	56.7
SQG25331.1\|1853028_1853436_+	phage protein	A0A1X9I5V7	Streptococcus_phage	1.3e-49	69.4
SQG25332.1\|1853448_1853571_+	phage protein	NA	NA	NA	NA
SQG25333.1\|1853853_1854375_+	phage protein	R9QNB1	Lactococcus_phage	7.4e-21	40.2
SQG25334.1\|1854622_1854796_+	phage protein	NA	NA	NA	NA
SQG25335.1\|1855013_1855187_+	phage protein	NA	NA	NA	NA
SQG25336.1\|1855327_1855780_+	phage protein	NA	NA	NA	NA
SQG25337.1\|1855881_1856214_+	phage protein	NA	NA	NA	NA
SQG25338.1\|1856210_1856405_+	phage protein	NA	NA	NA	NA
SQG25339.1\|1856416_1856746_+	phage protein	NA	NA	NA	NA
SQG25340.1\|1856748_1857021_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	3.6e-19	60.0
SQG25341.1\|1857021_1857888_+	replication protein	A0A1X9I6L2	Streptococcus_phage	6.1e-121	73.8
SQG25342.1\|1857899_1859294_+	Predicted P-loop ATPase and inactivated derivatives	A0A1W6JQD6	Staphylococcus_phage	1.3e-48	38.1
SQG25343.1\|1859587_1859842_+	phage protein	NA	NA	NA	NA
SQG25344.1\|1859838_1860012_+	phage protein	A0A1X9I5U0	Streptococcus_phage	8.6e-11	59.6
SQG25345.1\|1860017_1860191_+	phage protein	NA	NA	NA	NA
SQG25346.1\|1860192_1860702_+	phage protein	A0A1X9I5U4	Streptococcus_phage	1.9e-29	63.5
SQG25347.1\|1860775_1861264_+	phage protein	A0A1X9I5V2	Streptococcus_phage	1.4e-45	54.9
SQG25348.1\|1861667_1862030_+	phage protein	NA	NA	NA	NA
SQG25349.1\|1862004_1862388_+	phage protein	Q938L8	Temperate_phage	3.7e-14	41.7
SQG25350.1\|1862588_1863206_+	phage protein	NA	NA	NA	NA
SQG25351.1\|1863602_1866158_-	DNA mismatch repair protein mutS	A0A1V0SGG8	Hokovirus	1.2e-42	22.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483386

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection