CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483392	Haemophilus influenzae strain NCTC11931 genome assembly, chromosome: 1	2 crisprs	DEDDh,DinG,cas14j,cas3,csa3,WYL	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483392_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483392_1

1140493-1140640

Orphan

Consensus_repeat	Method
TGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of LS483392_1

>merge|LS483392|1|1140493-1140640|CRISPRCasFinder
TGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTCTATAATGTGAAATTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

>LS483392|1|1|1140493-1140640|CRISPRCasFinder
TGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTCTATAATGTGAAAT
TGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
LS483392.1\|SQG36363.1\|1142916_1144644_+\|PEP-protein-phosphotransferase-of-PTS-system-(enzyme-I)	unknown	unknown	gnl\|CDD\|183017
LS483392.1\|SQG36351.1\|1129176_1130511_-\|argininosuccinate-synthetase	unknown	unknown	gnl\|CDD\|235434
LS483392.1\|SQG36353.1\|1131724_1134073_-\|penicillin-binding-protein-1b	unknown	unknown	gnl\|CDD\|273952
LS483392.1\|SQG36368.1\|1148355_1150299_+\|choline-transporter-of-high-affinity	unknown	unknown	gnl\|CDD\|224211
LS483392.1\|SQG36357.1\|1135814_1138406_+\|uridylyltransferase	unknown	unknown	gnl\|CDD\|234980
LS483392.1\|SQG36366.1\|1145979_1146645_+\|DNA-binding-response-regulator-in-two-component-regulatory-system-with-QseC	unknown	unknown	gnl\|CDD\|182387
LS483392.1\|SQG36369.1\|1150335_1151811_-\|aminopeptidase-A	unknown	unknown	gnl\|CDD\|234863
LS483392.1\|SQG36360.1\|1140762_1141311_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
LS483392.1\|SQG36364.1\|1144703_1145204_+\|glucose-specific-enzyme-IIA-component-of-PTS	unknown	unknown	gnl\|CDD\|181859
LS483392.1\|SQG36367.1\|1146641_1147997_+\|sensory-histidine-kinase-in-two-component-regulatory-system-with-QseB	unknown	unknown	gnl\|CDD\|182388
LS483392.1\|SQG36356.1\|1134915_1135722_+\|methionine-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
LS483392.1\|SQG36352.1\|1130687_1131560_-\|phosphoribosylaminoimidazole-succinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
LS483392.1\|SQG36361.1\|1141381_1142422_+\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|237039
LS483392.1\|SQG36355.1\|1134434_1134779_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
LS483392.1\|SQG36358.1\|1138556_1138778_-\|Sel1-domain-containing-protein	unknown	unknown	gnl\|CDD\|276807
LS483392.1\|SQG36365.1\|1145550_1145916_+\|putative-outer-membrane-protein	unknown	unknown	gnl\|CDD\|129260
LS483392.1\|SQG36350.1\|1127906_1129100_+\|Mn2+-and-Fe2+-transporter-of-the-NRAMP-family	unknown	unknown	gnl\|CDD\|224826
LS483392.1\|SQG36359.1\|1139297_1140365_+\|UDP-GlcNAc:undecaprenylphosphate-GlcNAc-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|131433
LS483392.1\|SQG36362.1\|1142579_1142837_+\|phosphohistidinoprotein-hexose-phosphotransferase-component-of-PTS-system-(Hpr)	unknown	unknown	gnl\|CDD\|182777
LS483392.1\|SQG36354.1\|1134079_1134478_-\|Uncharacterised-protein-family-(UPF0231)	unknown	unknown	gnl\|CDD\|225654

Protein	Function_ID	Function_description	E-value
LS483392.1\|SQG36363.1\|1142916_1144644_+\|PEP-protein-phosphotransferase-of-PTS-system-(enzyme-I)	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
LS483392.1\|SQG36351.1\|1129176_1130511_-\|argininosuccinate-synthetase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
LS483392.1\|SQG36353.1\|1131724_1134073_-\|penicillin-binding-protein-1b	gnl\|CDD\|273952	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
LS483392.1\|SQG36368.1\|1148355_1150299_+\|choline-transporter-of-high-affinity	gnl\|CDD\|224211	COG1292, BetT, Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane].	0
LS483392.1\|SQG36357.1\|1135814_1138406_+\|uridylyltransferase	gnl\|CDD\|234980	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
LS483392.1\|SQG36366.1\|1145979_1146645_+\|DNA-binding-response-regulator-in-two-component-regulatory-system-with-QseC	gnl\|CDD\|182387	PRK10336, PRK10336, two-component system response regulator QseB.	2.61021e-102
LS483392.1\|SQG36369.1\|1150335_1151811_-\|aminopeptidase-A	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
LS483392.1\|SQG36360.1\|1140762_1141311_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	1.52565e-132
LS483392.1\|SQG36364.1\|1144703_1145204_+\|glucose-specific-enzyme-IIA-component-of-PTS	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	6.92822e-101
LS483392.1\|SQG36367.1\|1146641_1147997_+\|sensory-histidine-kinase-in-two-component-regulatory-system-with-QseB	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	2.49643e-174
LS483392.1\|SQG36356.1\|1134915_1135722_+\|methionine-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.31202e-158
LS483392.1\|SQG36352.1\|1130687_1131560_-\|phosphoribosylaminoimidazole-succinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
LS483392.1\|SQG36361.1\|1141381_1142422_+\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
LS483392.1\|SQG36355.1\|1134434_1134779_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	1.3229e-81
LS483392.1\|SQG36358.1\|1138556_1138778_-\|Sel1-domain-containing-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	2.08456e-22
LS483392.1\|SQG36365.1\|1145550_1145916_+\|putative-outer-membrane-protein	gnl\|CDD\|129260	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae. [Hypothetical proteins, Conserved].	7.86445e-56
LS483392.1\|SQG36350.1\|1127906_1129100_+\|Mn2+-and-Fe2+-transporter-of-the-NRAMP-family	gnl\|CDD\|224826	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism].	8.06751e-86
LS483392.1\|SQG36359.1\|1139297_1140365_+\|UDP-GlcNAc:undecaprenylphosphate-GlcNAc-1-phosphate-transferase	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
LS483392.1\|SQG36362.1\|1142579_1142837_+\|phosphohistidinoprotein-hexose-phosphotransferase-component-of-PTS-system-(Hpr)	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	2.20826e-35
LS483392.1\|SQG36354.1\|1134079_1134478_-\|Uncharacterised-protein-family-(UPF0231)	gnl\|CDD\|225654	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown].	1.59668e-60

>LS483392.1|SQG36359.1|1139297_1140365_+|UDP-GlcNAc:undecaprenylphosphate-GlcNAc-1-phosphate-transferase
MLSIFVTFLGSFLTLIVMRPVANWIGLVDKPNYRKRHQGTIPLIGGVSLFVGNLCYYLMEWDQLRLPYLYLFSIFVLLAIGILDDRFDISPFLRAGIQAILAILMIDLGNIYLDHLGQILGPFQLTLGSIGLIITVFATIAIINAFNMIDGIDGLLGGLSCVSFAAIGILMYRDGQMDMAHWSFALILSILPYLMLNLGIPFGPKYKVFMGDAGSTLIGFTIIWILLLSTQGKGHPMNPVTALWIIAIPLIDMVAIIYRRVRKGKSPFRPDRLHVHHLMVRAGLTSRQAFLLITLVSAVCATIGILGEIYYVNEWAMFVGFFILFFLYVYSITRAWRITRWVRRMKRRAKRLKKA
>LS483392.1|SQG36358.1|1138556_1138778_-|Sel1-domain-containing-protein
MQPLAAQGHAKAQNSLGNMYNDGKGVKQDYAEAIKWYQKAAEQDYTKAQFNLGTMYHNGEGVKRDLSKAKMVP
>LS483392.1|SQG36357.1|1135814_1138406_+|uridylyltransferase
MLFPLPLSSPLTPSAVKIERENFKQFELENFSRYSIFELVENRSDFYDALLIQLWQEMGLSEQLGISLIAVGGYGRREMFPLSDLDFLILVEQTPIPEIEEKITQFIQFLWDCGFEVGNSVRTLEQCELEGKQDITIATNLLEARFLIGNRPHFDALNELVKRADFWSKEGFFNAKVQEQIERYQRYHNTAYNLEPDIKYSPGGLRDLHLLYWVALHHSGALTLEAILQSGFIYPQEYQQLQESRAFLFKVRFALHLILKRYDNRLLFDRQIKVSELLGFRGDGNQAVEKMMKCFFQALHRISLISNLLIQHYRENVLSLNQATVIHQLDDDFQLINQCLCLRNSLVFQEKPTRILDLFFYLTQYEQANIHSDTLRQLQISLEQLPQKLCEIPEAREKFLRLFNQPNSIKRAFMPMHQYGVLTAYLPQWQAIEGLMQFDLFHIYTVDEHTLRVMLKLESFLSQESAQEHPIAHRIFSQFSDRTLLYIAALFHDIAKGRGGDHAELGAKDVADFAQLHGLDRREIDTLAWLVKSHLLMSITAQRRDIHDPEVVMNFAEAVQNQVRLDYLTCLTVADICATNSNLWNSWKRSLFASLYEFTEQQFAQGMKELLDYSEKSEENRKLAQQILTQDYSNIALISIEQLWERCPEDYFVRNTPKQIAWHTSLLVDLVEALLVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLSALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALAREEREILKQILVKEIN
>LS483392.1|SQG36356.1|1134915_1135722_+|methionine-aminopeptidase
MAIPIRTEKEIVKLREVCKLASDVLVMIEPYVKAGVTTGELDRICHEYMVNEQKVISACLNYHGFPKATCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGIRTVKPDIRLNEIGKAVQKYTESQTFSVVREYCGHGVGTEFHCEPQVLHYYADDGGVILKPGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLVVTETGCEVMTIRDEEIAEGRISRIMINV
>LS483392.1|SQG36355.1|1134434_1134779_-|iron-sulfur-cluster-insertion-protein-ErpA
MIDDIAVPLTFTDAAANKVKSLISEEENTNLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
>LS483392.1|SQG36354.1|1134079_1134478_-|Uncharacterised-protein-family-(UPF0231)
MPPALVAVVHPLVSKMDFQFTHYQGNVSVKCSMEHIALANWFNTEVRSNSDKILTALSTAQSLIENQEKILIGAEYTLFLNADEVMVHANNLAIESDEILEDDFHYYDEESLAFCGTQDFIHFLLSYVDFIA
>LS483392.1|SQG36353.1|1131724_1134073_-|penicillin-binding-protein-1b
MTSQHSAKKSSKNTPKNNRTFKGFLLKFSFTVLVLTIFYGGYLDWQIRSKMDGQIWHLPAEVYSRLESVKIADNLTFDEIIQILLDNEYRQTTMVAAPGDFKLEDDSIVVLRRAFPFPDKAEPQRVLRLRFSNNKLSRIEDLVTVKTVDEFRLAPKLIAMLQSDNEDRLAIPLQNYPRLLIDTLILTEDRRFYEHNGINPVGILRALIANIRAGQTVQGGSTLTQQLVKNLFLSRERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFELASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNIVLKLMLEHKMIGDELYQLLSQRPLGVQKKGQISRKYPAFIQTLQADLRRELGEHKMSSLLGARIFSTMDLKQQTQAENAVVNTVSQLQLKTKNPHLEGAMIITDYRTGEIRAVVGGLQTQYAGFNRALMAKRQIGSLVKPSIYLTALSNPEQFRLNTLINNQPITINVKGSPPWQPRNYDKKYSGSVMLMDALARSLNIPTVNIGMKVGLSKVIDTQKAMGWDNVEIPKVPAMLLGSYTISPYDVTKLYQTIANQGGRISLTTVDSITDRQGNLIFQHDKSVKQVVPQEAAFQTLFAMQQTVERGTARSLQKDYADLHLAGKTGTTNEARDTWFVGIDGKNISTVWLGRDDNGETKLTGASGALQIYKDYLNRTNIEKLAITPPATVKWVGINQYGGWDCESYRTIPVWLNNGQNFCGEIASPSFTPTEAETTTPPQESLWDVLDNPNPPAQ
>LS483392.1|SQG36352.1|1130687_1131560_-|phosphoribosylaminoimidazole-succinocarboxamide-synthase
MTQQSLTLSLKKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPIPRKGEILTQISNFWFNKLAHIMPNHFTGDSVYDVLPKEEADLIKDRAVVCKRLTPIKIESIVRGYLTGSGLKDYKQTGTICGLKLPENLVEASKLPEAIFTPSSKEEVGNHDINISYTECEKLIGSDLAAQVKEKAIALYTTAAEYALTKGIIICDTKFEFGLDENGTLTLMDEVLTPDSSRFWSVDTYQAGTNPPSFDKQFVRDWLENSGWNKQAPAPKVPENIIQKTVDKYQEALDLLTK
>LS483392.1|SQG36351.1|1129176_1130511_-|argininosuccinate-synthetase
MSNTILQSLPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAENAHLIDCRAQLAHEGIAAIQCGAFHISTGGIPYFNTTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPNLKIYKPWLDAQFIEELGGRLEMSQFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEQLSTGMKIVKPIMGVAFWDEKVEIKPETVTVTFEDGVPVALNGKHFDNAVDIILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGIRLGRLLYQGRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESANLTYEAERLSMEKVEDAPFDPIDRIGQLTMRNLDVSDTRGKLGIYAQTGLLSAIKDSVLPQLGKK
>LS483392.1|SQG36350.1|1127906_1129100_+|Mn2+-and-Fe2+-transporter-of-the-NRAMP-family
MASITHRRNAVLGAAFLMATSAIGPGFLTQTATFTNTLLASFGFVILLSILLDIGAQLNIWRIVIVSGKRAQDISNAVFPKAGYFLAALIVMGGLAFNIGNVGGAGLGLNSIFGIAPEIGAVISGIIAILIFLRKEAGLLMDRFAQLMGFIMVALTFYVMFKTEPPVAEAAYHSFIPEQIDPIAIVTLVGGTVGGYITFAGAHRLLDAGIQGEKAIAEVSRSSVSAILIASTMRIVLFLAVLGVVSKGVSLNPKNPAETPFEYVAGNFGQVLFGVVIWAASITSVIGAAYTSVSFLTTLCPTIERNRNRWIIAFIVISTVVLVTVGKPAAVLVFVGTLNGLILPIALALILLAAYRSDIVGTYKHPVFLAFSGWFVVIIMAILSGKTIISYISSFFS
>LS483392.1|SQG36360.1|1140762_1141311_-|oligoribonuclease
MPFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRYLDVSTLKELAARWKPEILESFKKENTHLALDDIRESIKELAYYCEHFIKLD
>LS483392.1|SQG36361.1|1141381_1142422_+|ribosome-small-subunit-dependent-GTPase-A
MAKRKLTQNQTRRIQSNNAKTLHRHKKKEIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIVANVDRIIIVSAVLPTLSLNIIDRYLVVCEIAGITPLIVLNKVDLLTQEQRQEIEEQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLIDPGCALREAVEQGKISPVRYDNYHRLIESLSETKSQRHFSAV
>LS483392.1|SQG36362.1|1142579_1142837_+|phosphohistidinoprotein-hexose-phosphotransferase-component-of-PTS-system-(Hpr)
MYSKDVEIISSNGLHTRPAAQFVKEAKAFSSEITVTSGGKSASAKSLFKLQTLALTQGTILTISADGEDEQQAVEHLVALIPTLE
>LS483392.1|SQG36363.1|1142916_1144644_+|PEP-protein-phosphotransferase-of-PTS-system-(enzyme-I)
MISGILASPGIAFGKALVLKEEKIVLDTQKITDDQIDEEVARFYEGRAAAVEQLNSIRERALISLGEEKAAIFEGHLMILEDEELEEEILDYLRSNKVNAGVAASKILDQQVTMLSEIDDEYLKERAGDIRDIANRLVKNILGMHIVDLGDIQEESILVAYDLTPSETAQLNLEKVLGVVTDIGGRTSHTSIMARSLELPAIVGTNKVTKLVNTGDYLILDAINNQVYINPTASQIDELKALEAKISEEKAELAKLKDLPAITLDGHKVDIVANIGTIRDCDGAERNGAEGIGLYRTEFLFMDREQLPTEEEQFIAYKQVVEAMNGRLTVLRTMDIGGDKELSYLDLPKEMNPFLGWRAIRIALDRREILNAQLRAVLRASAFGKLAVMFPMIISVEEIRELKAVIETLKAELREEGRVFDNNIQVGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNEFISHLYNPMHPSVLGLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNFQDAKALADAALQKPTAAEIDQLIEEFLLENSLN
>LS483392.1|SQG36364.1|1144703_1145204_+|glucose-specific-enzyme-IIA-component-of-PTS
MGLFDKLFGSKENKSVEVEIYAPISGEIVNIEDVPDVVFSEKIVGDGVAVRPIGNKIVAPVDGVIGKIFETNHAFSMESKEGVELFVHFGIDTVELKGEGFTRIAQEGQSIKRGDTVIEFDLPLLESKAKSVLTPIVISNMDEISCIVKKSGEVVAGESVVLALKK
>LS483392.1|SQG36365.1|1145550_1145916_+|putative-outer-membrane-protein
MKKFALATIFALATTSAFAGFNGNNSQGGFQQTAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEAFEKAELDVLRVEKAE
>LS483392.1|SQG36366.1|1145979_1146645_+|DNA-binding-response-regulator-in-two-component-regulatory-system-with-QseC
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLDVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGHHHSVIEQSGVKLDQNQRSVWLNNQPISLTSREYKLLELLMLNKDRVLSRTSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
>LS483392.1|SQG36367.1|1146641_1147997_+|sensory-histidine-kinase-in-two-component-regulatory-system-with-QseB
MKNRSLTLRLISVLSLTALLVWLSSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSAILLESSTKLDKNSQSALKKSYDDDALAFAIFSQTGKLLFSDGRNGKRFIFNNKMGFHNANIYDDDDKWRIFWRTAANGELFIAVGQELDYREDLIEEMIFGQMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQRRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTSDAAHELRSPLAALRIQTEVAQLAGDDIALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIIQSLISERYFVAEKRKITLVFEKESEPKQKQGQLVLVSLMLRNLLDNAIKYCPEDTIVSVKIASSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVIKESQRIGLKAIIYL
>LS483392.1|SQG36368.1|1148355_1150299_+|choline-transporter-of-high-affinity
MAMIFIAPEQTQALLNQAKSGIFANFSWFYVLTFSVFLGFLLILSVSSLGNIKLGQDEEEPEFSFLSWLAMLFAAGMGVGLMFFGVAEPLTHYLSDITAGSAEHKQQEALLHTLFHWGIHAWAVYGTIALALAYFGFRYKLPLALRSCFYPLLKDRINGKIGDAIDVMALLATLFGIITTLGFGSSQLGAGLEQIGWISQNSFALQVGVIVVVMCLAVFSAISGVGKGVKILSEINLTLAFCLLLFVLIAGPTLYLLSAFSDNMGNYFSNLVQLSFKTYAYEQEHTSWFSGWTVLYWAWWCSWAPFVGLFIARISKGRTIREFIFGVLVIPSLFGILWFTVFGNTAVWLNDGIAAGGLGEFISSPEILLFKFLNYLPLPTVTGFVSLLVISLFFITSADSGIYVLNNIASRDKSLASPAWQAIMWGTLMSVVAIVLMQSGGLANLQTMTLIVALPFALLMLVMCFSLWKGLIADKKYFSTKVNPTSIFWSGDKWKSHLEQMMNQTQEKDILRFLKNTALPAMRELRQELTGKYNLSVEINRLFEQEEPALELVIHKESMRDFMYGIKSVGREVSEQLINDENLPHIQHSTTYEPYTYFFDGRVGYDVQYMDQDELIADMLKQYERYLSLLDDVGQELMAHEQTELAE
>LS483392.1|SQG36369.1|1150335_1151811_-|aminopeptidase-A
MKYQAKNTALSQTTDCIVLGIYENNEFSKSFNEIDQLTQGYLNDLVKSGELTGKLAQIVLLRDLQGLSAKRVLIVGCGKKGELTERQYKQIIQAVLKTLKETNTREVVSYLTEIELKNRDLYWNIRFAIETIEHTNYQFDHFKSQKTEASVLESFIFNADCEQAQQAIAHANAISSGIKAARDIANMPPNICNPAYLAEQAKNLAENSTALSLKVVDEEEMAKLGMNAYLAVSKGSENRAYMSILTFNNAPDKNAKPIVLVGKGLTFDAGGISLKPAADMDEMKYDMCGAASVFGTMKAIAELNLPLNIIGVLAGCENLPDGNAYRPGDILNTMNGLTVEVLNTDAEGRLVLCDALTYVERFEPELVIDVATLTGACVVALGQHNSGLVSTDNALANALLQASTETTDKAWRLPLSEEYQEQLKSPFADLANIGGRWGGAITAGAFLSNFTKKYRWAHLDIAGTAWLQGANKGATGRPVSLLTQFLINQVK

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Crispr_ID: LS483392_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483392_2

1837933-1838084

Orphan

Consensus_repeat	Method
CCCCAAAGGGGTAATATCAAACTAACCTAGGGTATACCTACCCTAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483392_2

>merge|LS483392|2|1837933-1838084|CRISPRCasFinder
CCCCAAAGGGGTAATATCAAACTAACCTAGGGTATACCTACCCTAGGAACAGACTCACATATAGGTACACCTTAAGTTCAGCCCCATTGAAGAACTTTACACTTGCCCCAAAGGGGTAACATCAAACTAACCTAGGGTATACCTACCCTAGG

>LS483392|2|2|1837933-1838084|CRISPRCasFinder
CCCCAAAGGGGTAATATCAAACTAACCTAGGGTATACCTACCCTAGG	AACAGACTCACATATAGGTACACCTTAAGTTCAGCCCCATTGAAGAACTTTACACTTG
CCCCAAAGGGGTAACATCAAACTAACCTAGGGTATACCTACCCTAGG

Protein	Signature genes	Signature genes Name	Protein_function
LS483392.1\|SQG37106.1\|1848281_1849052_-\|Sec-independent-protein-translocase-protein-TatC	unknown	unknown	gnl\|CDD\|182840
LS483392.1\|SQG37107.1\|1849061_1849622_-\|sec-independent-translocase	unknown	unknown	gnl\|CDD\|179334
LS483392.1\|SQG37091.1\|1832198_1832480_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483392.1\|SQG37101.1\|1843919_1844525_-\|regulatory-protein-for-replication-initiation	unknown	unknown	gnl\|CDD\|236874
LS483392.1\|SQG37093.1\|1833979_1834951_-\|selenophosphate-synthase	unknown	unknown	gnl\|CDD\|234870
LS483392.1\|SQG37100.1\|1842558_1843917_-\|o-succinylbenzoate-CoA-ligase	unknown	unknown	gnl\|CDD\|236363
LS483392.1\|SQG37090.1\|1831859_1832078_-\|putative-YdcH	unknown	unknown	gnl\|CDD\|225397
LS483392.1\|SQG37089.1\|1831333_1831813_+\|Uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|182143
LS483392.1\|SQG37099.1\|1839192_1842516_-\|potassium-efflux-protein-KefA	unknown	unknown	gnl\|CDD\|236892
LS483392.1\|SQG37097.1\|1837739_1837898_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483392.1\|SQG37088.1\|1830561_1831332_+\|inner-membrane-protein	unknown	unknown	gnl\|CDD\|225514
LS483392.1\|SQG37103.1\|1845471_1845996_+\|flavodoxin-1	unknown	unknown	gnl\|CDD\|236439
LS483392.1\|SQG37105.1\|1846570_1847920_-\|glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|181834
LS483392.1\|SQG37096.1\|1836864_1837725_-\|murein-DD-endopeptidase	unknown	unknown	gnl\|CDD\|226293
LS483392.1\|SQG37095.1\|1836079_1836847_-\|inner-membrane-protein	unknown	unknown	gnl\|CDD\|182593
LS483392.1\|SQG37104.1\|1846023_1846464_+\|DNA-binding-transcriptional-dual-regulator	unknown	unknown	gnl\|CDD\|236527
LS483392.1\|SQG37098.1\|1838109_1839183_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
LS483392.1\|SQG37092.1\|1832638_1833928_+\|seryl-tRNA-synthetase,-also-charges-selenocysteinyl-tRNA-with-serine	unknown	unknown	gnl\|CDD\|235461
LS483392.1\|SQG37094.1\|1835076_1836033_-\|myristoyl-acyl-carrier-protein-(ACP)-dependent-acyltransferase	unknown	unknown	gnl\|CDD\|236355
LS483392.1\|SQG37102.1\|1844594_1845377_+\|esterase	unknown	unknown	gnl\|CDD\|182637

Protein	Function_ID	Function_description	E-value
LS483392.1\|SQG37106.1\|1848281_1849052_-\|Sec-independent-protein-translocase-protein-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	4.0682e-129
LS483392.1\|SQG37107.1\|1849061_1849622_-\|sec-independent-translocase	gnl\|CDD\|179334	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB.	2.90308e-60
LS483392.1\|SQG37100.1\|1842558_1843917_-\|o-succinylbenzoate-CoA-ligase	gnl\|CDD\|236363	PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional.	0
LS483392.1\|SQG37101.1\|1843919_1844525_-\|regulatory-protein-for-replication-initiation	gnl\|CDD\|236874	PRK11187, PRK11187, replication initiation negative regulator SeqA.	1.40257e-106
LS483392.1\|SQG37092.1\|1832638_1833928_+\|seryl-tRNA-synthetase,-also-charges-selenocysteinyl-tRNA-with-serine	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
LS483392.1\|SQG37095.1\|1836079_1836847_-\|inner-membrane-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	1.02547e-106
LS483392.1\|SQG37090.1\|1831859_1832078_-\|putative-YdcH	gnl\|CDD\|225397	COG2841, COG2841, Uncharacterized protein conserved in bacteria [Function unknown].	7.85157e-21
LS483392.1\|SQG37088.1\|1830561_1831332_+\|inner-membrane-protein	gnl\|CDD\|225514	COG2966, COG2966, Uncharacterized conserved protein [Function unknown].	2.99332e-81
LS483392.1\|SQG37099.1\|1839192_1842516_-\|potassium-efflux-protein-KefA	gnl\|CDD\|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	0
LS483392.1\|SQG37089.1\|1831333_1831813_+\|Uncharacterized-conserved-protein	gnl\|CDD\|182143	PRK09917, PRK09917, threonine/serine exporter.	3.49967e-58
LS483392.1\|SQG37103.1\|1845471_1845996_+\|flavodoxin-1	gnl\|CDD\|236439	PRK09267, PRK09267, flavodoxin FldA; Validated.	1.77291e-104
LS483392.1\|SQG37105.1\|1846570_1847920_-\|glutamate-dehydrogenase	gnl\|CDD\|181834	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase.	0
LS483392.1\|SQG37096.1\|1836864_1837725_-\|murein-DD-endopeptidase	gnl\|CDD\|226293	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane].	1.67801e-178
LS483392.1\|SQG37093.1\|1833979_1834951_-\|selenophosphate-synthase	gnl\|CDD\|234870	PRK00943, PRK00943, selenide, water dikinase SelD.	0
LS483392.1\|SQG37104.1\|1846023_1846464_+\|DNA-binding-transcriptional-dual-regulator	gnl\|CDD\|236527	PRK09462, fur, ferric uptake regulator; Provisional.	3.11871e-71
LS483392.1\|SQG37098.1\|1838109_1839183_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
LS483392.1\|SQG37094.1\|1835076_1836033_-\|myristoyl-acyl-carrier-protein-(ACP)-dependent-acyltransferase	gnl\|CDD\|236355	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated.	0
LS483392.1\|SQG37102.1\|1844594_1845377_+\|esterase	gnl\|CDD\|182637	PRK10673, PRK10673, esterase.	6.24877e-103

>LS483392.1|SQG37097.1|1837739_1837898_+|Uncharacterised-protein
MGKHILGFAVGKYILGLAVGKYILGFTVGKYILGFTVGKYILGFAVGKYTHG
>LS483392.1|SQG37096.1|1836864_1837725_-|murein-DD-endopeptidase
MNKILLKKTIIFTALFSLNVAASPLDWQKVKRPIPSGDGKAKPIGSYTNGCIIGAQALPPKGDGYQVIRMNRNRYYGHPNMIQYLERLGQRAKAAGLPTMLVGDIAMPGGGRFLTGHASHQMGLDADIWLRMGEMSDADALNSDGKGLLVVDRKAQRVDERVWNSNHATLIKLAAQDPNVTRIFVNPAIKVKLCQTAGNDRGWLHKVRPWYGHDSHFHVRLTCPADAFYCENQAPVPPSDGCGDELYSWFEPPKPGASVSKPKVTPPEPFLCQQILNSPNRNEWLE
>LS483392.1|SQG37095.1|1836079_1836847_-|inner-membrane-protein
MDIGIDLLAILFCVGFVASFIDAIAGGGGLITIPALLMTGMPPAMALGTNKLQAMGGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFRKILPFLILVIGLYFLFTPKLGDEDRKQRLSYLLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKATAHAKVMNFTSNLASFTLFLLGGQILWKVGFVMMAGSILGANLGAKMVMSKGKTLIRPMVVIMSFMMTAKMVYEQGWFHF
>LS483392.1|SQG37094.1|1835076_1836033_-|myristoyl-acyl-carrier-protein-(ACP)-dependent-acyltransferase
MSDNQQNLRLTARVGYEAHFSWSYLKPQYWGIWLGIFFLLLLAFVPFRLRDKLAGKLGIWIGHKAKKQRTRAQTNLQYCFPHWTEQQREQVIDKMFAVVAQVMFGIGEIAIRSKKHLQKRSEFIGLEHIEQAKAEGKNIILMVPHGWAIDASGIILHIQGMPMTSMYNPHRNPLADWLWTITRQRFGGKMHARQNGIKPFLNHVRKGEMGYYLPDEDFGAEQSVFVDFFGTYKATLPGLNKMAKLSKAVVIPMFPRYNAETGKYEMEIHPAMNLSDDPEQSARAMNEEIESFVTPTPEQYVWILQLLRTRKDGEDLYD
>LS483392.1|SQG37093.1|1833979_1834951_-|selenophosphate-synthase
MLGTILHSELEKFYDPNLLVGNETADDAAVYDLGNGTAIISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMGIAILGFPTNVLPAEVAQKIVDGGRFACHQAGIALAGGHSIDSPEPIFGLAVTGVIDTEKVKRNASAKSGCKLYMTKPLGIGILTTAEKKGKLKPEHQGLATAAMFQMNSIGSQFSQVDGVTAMTDVTGFGLLGHLIEICEGSNLSAVVFADKIKTLDGVKDYIAQGCVPGGTGRNFESYGHKVGLLTEEQKAILCDPQTSGGLLVAVEPNSVQTVIEIAKDAGIDLYEVGELKSKSESDVAVEIA
>LS483392.1|SQG37092.1|1832638_1833928_+|seryl-tRNA-synthetase,-also-charges-selenocysteinyl-tRNA-with-serine
MIDPNLLRNNLSEVAEKLKVKRNFILDTEKLTSLEEQRKNLQVTTENLQAERNTRSKAIGAAKARGEDIEPLLAEVDNMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPRTFDFEVKDHVALGEDANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLDVIGK
>LS483392.1|SQG37091.1|1832198_1832480_-|Uncharacterised-protein
MRKFILSFLFMLIGGGLVLRGSVFISQNKLKMMQSIQPLDNNLVAFHFVQQPNLVMAEKPYVISTGIGAGFGIILSLLAMMILGAGRNKKAKE
>LS483392.1|SQG37090.1|1831859_1832078_-|putative-YdcH
MFPEYRDLITQLKSNDAYFDRLFEEHNELDHEIKNMQENIQLATHMEIEALKKEKLRIKDELYEYLKKKSQE
>LS483392.1|SQG37089.1|1831333_1831813_+|Uncharacterized-conserved-protein
MLLDITIFILKLLDDMLFAAIPAVGFALVFNVPPKALKYCAILAALGHVTHTLLLHIDMPIVFATFFATCVIGFLGVHLSHRYLAHPKAFTVAAIIPMIPGVHAYKAMISMVQIHHFGFSDALFEQMISSFINTSFILGAIVFGLALPGLLFYRQKPVV
>LS483392.1|SQG37088.1|1830561_1831332_+|inner-membrane-protein
MEHEYQRAVTRVCVQTALLLLQHGAESTVVVQMAQRLGIALGVESVECALTANAVVLTTLSDNHCITTARKNTDKGINMQMVTDVQRIVIAVEHHLYDLEIAQRKLNQLKPLKYNRWLVVFMIGLSCAAFAHLSGGDWIICGITFVAAAIAMFVRQEFSKRHYNPIIVFSITSFVASLISGVSLKYNLGNDPQIALASSVLLLVPGFPLINSLADILKGYVNMGLGRWTIATILTFGACLGIVFALSVLHITTWGH
>LS483392.1|SQG37098.1|1838109_1839183_-|chorismate-synthase
MAGNTIGQLFRVTTFGESHGIALGCIVDGVPPNLKLSEKDIQPDLDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGMIIKNADQRSQDYGEIKDRFRPGHADFTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREHFGIEVRGFLSQIGHVKISPQTIGEIDWEKVNSNPFFCPDESAVEKFDELIRELKKEGDSIGAKLTVIAENVPVGLGEPVFDRLDADLAHALMGINAVKGVEIGDGFAVVEQRGSEHRDEMTPNGFESNHTGGILGGISSGQPIIATIALKPTSSITISGRSINLNGEPVEVMTKGRHDPCVGIRAVPIAEAMMAIVLLDHLLRFKAQCK
>LS483392.1|SQG37099.1|1839192_1842516_-|potassium-efflux-protein-KefA
MKTPPFFTALFASAMFTLSVSQGALGANSTNVLPTEQSLKADLANAQKMSEGEAKNTLLAELQTSIDLLQQIQAQQKINDALQTTLSHSESEIRKNNAEIQALKKQQETATSTDYNAQSQDDLQNSLAKLNDQLQDTQNALSTANAQLAGQSSISERAQAALTENVVRTQQINQQLANNDIGSALRKQYQIELQLIDLKNSYNQNLLKNNDQLSLLYQSRYDLLNLRLQVQQQNIIAIQEVINQKNLQQSQNQVEQAQQQQQKTVQNDYIQKELDRNAQLGQYLLQQTEKANSLTQDELRMRNILDSLTQTQHTIDEQISALQGTLVLSRIIQQQKQKLPTNLNIQGLSKQIADLRVHIFDITQKRNELYDLNNYINKVESEDGKQFTEAERTQVKTLLTERRKMTSDLIKSLNNQLNLAISLELTQQQITQISDQIQSKLEQQSFWVKSNNPINLDWIKMLPRALIEQFNGMLKKLGFPTNYDNLPYLLMYFLGLFIVGGAIFKFKNRIKQQLNKINREIHRLDTDSQWSTPLALLLTAFLTLSSTLWFLAVCQMIGFFFFKNPEEFWHWSFSMAGYWWFFTFWISLFRPNGIFVNHFESSKENAQRFRGVIQRIIIVIVLLLNTSVFSNVTDAGLANDVLGQINTITALIFCAAIIAPRFNRVLRSYEPEINKHHWLIRIVQIGLRLIPVGLIVLIVLGYYYTALNLIEHFIHSYIAWCVWWLVRNTIYRGITVSSRRLAHRRLAEKRRQKALENNYENISSDDVVAVGEPEESLALNDVRSQLLRFVDLFIWTALLGIFYYVWSDLVTVVSYLREITLWQQTTTTDAGTVMESITLFNLLVALVILGITYVLVRNISGILEVLIFSRVNLSQGTPYTITTLLTYIFIAIGGAWAFATLGMSWSKLQWLFAALSVGLGFGMQEIFANFVSGIILLFERPIRVGDVVTINEVSGTVAKIRIRAITLIDFDRKEVIVPNKSFVTGQVTNWALSNTMTRLVISVGVAYGSDLTLVRQLLLQAADEQPTVLRDPKPSAYFLTFGASTLDHELRVYVEQVGDRTSTTDAINRRINELFAEHNIDIAFNQLDVFIKNNDTGEEIPFVDVKK
>LS483392.1|SQG37100.1|1842558_1843917_-|o-succinylbenzoate-CoA-ligase
MYPWQHFAIQPDFSDKIALRTTQGDALTWIELTTKINQTAVFLQKKGVNAESAVAFVGKNSEKILFLYLATIQLGAKILGINPAFPQEKIAELCEFYQIDFCFYDKDLLNLQEIDAFTQKADFFRPATMTLTSGSTGLPKAVVHNVQAHLDNAKGVCNLMKFDCNQSWLLSLPLYHVSGQGIVWRWLYCGAQLHFPKDDFYASLLETTHVSLVPTQLQRLLDYLQENSIISFSTRHILLGGTHIPAELTKKIVKYGIETYSGYGMTEMASTVFAKKSDEKQGVGQPLLGREYRLVNDEIWLKGAGLAMGYWKERQIVPLTNNQGWIQTKDKGIWQEGELVIIGRLDNMFISGGENIQPEEIEQVIIQHSSVNQVFVLPQKNKEFGQRPVALVDFNEPFSKSAVENLMFFLQDKLARFKQPIAYYPLPLMLGKGIKISRKQLADWLAKQDKIN
>LS483392.1|SQG37101.1|1843919_1844525_-|regulatory-protein-for-replication-initiation
MKIIEVDEELYQYIASQTHSIGESASDILRRLLSLPVHTSSVDDLVLTSAETNKSADQKPEQAINVKEVNIKTTKKQSITAINQIVEKVQTLLNSDEFKEESKAVVRFLAILRVLYRTNPESFAQATESLQGRTRVYFARDEATLLMAGNHTKPKQIPDTPYWVITNTNSGRKMLMLEGAMQSMELPETLIDEVRSYFTVN
>LS483392.1|SQG37102.1|1844594_1845377_+|esterase
MVKSLLNYQFHQVKQTINTPVLIFIHGLFGDMDNLGVIARAFSEHYNILRIDLRNHGHSFHSEKMNYQLMAEDVIEVIRHLSLSKVILIGHSMGGKTAMKITALCPELVEKLIVIDMSPLPYEGFGHKDVFNGLFAVKNAKPENRQQAKPILKQEINDEDVVQFMLKSFDVNSADCFRFNLTALFNNYADIMDWEKVRVFTPTLFIKGGNSSYIKIENSEKILEQFPNATAFTINGSGHWVHAEKPDFVIRAIKRFLNKN
>LS483392.1|SQG37103.1|1845471_1845996_+|flavodoxin-1
MAIVGLFYGSDTGNTENIAKQIQKQLGSDLIDIRDIAKSSKEDIEAYDFLLFGIPTWYYGEAQADWDDFFPTLEEIDFTDKLVGIFGCGDQEDYADYFCDAIGTVRDIIEPHGAIVVGNWPTEGYNFEASKALLEDDTFIGLCIDEDRQPELTAERVEKWCKQIYDEMCLAELA
>LS483392.1|SQG37104.1|1846023_1846464_+|DNA-binding-transcriptional-dual-regulator
MSEENIKLLKKAGLKITEPRLTILALMQNHKNEHFSAEDVYKILLEQGSEIGLATVYRVLNQFDEAHIVIRHNFEGNKSVFELAPTEHHDHIICEDCGKVFEFTDNIIEQRQREISEKYGIKLKTHNVYLYGKCSDINHCDENNSK
>LS483392.1|SQG37105.1|1846570_1847920_-|glutamate-dehydrogenase
MSKVASLDAFLTKVVQRDGHQPEFLQAVREVFTSIWPFLEANPKYRSEALLERLVEPERAFQFRVAWTDDKGQVQVNRAFRVQFNSAIGPFKGGMRFHPSVNLSILKFLGFEQIFKNALTTLPMGGAKGGSDFDPKGKSDAEVMRFCQALMAELYRHVGADTDVPAGDIGVGGREVGYLAGYMKKLSNQSACVFTGRGLSFGGSLIRPEATGYGLVYFAQAMLAEKGDSFAGKVVSVSGSGNVAQYAIEKALSLGAKVVTCSDSSGYVYDPNGFTTEKLAALFDIKNTKRGRVKDYAEQFGLQYFEGKRPWEVQVDIALPCATQNELELSDAQLLIKNGVKLVAEGANMPTTIEATEALLAADVLFGPGKAANAGGVATSGLEMAQSSQRLYWTAEEVDAQLHRIMLDIHANCKKYGTIEGQENINYVVGANVAGFVKVADAMLAQGVY
>LS483392.1|SQG37106.1|1848281_1849052_-|Sec-independent-protein-translocase-protein-TatC
MSNVDESQPLITHLVELRNRLLRCVICVVLAFVALVYFSNDIYHFVAAPLTAVMPKGATMIATNIQTPFFTPIKLTVIVAIFISVPYLLYQIWAFIAPALYQHEKRMIYPLLFSSTILFYCGVAFAYYIVFPFVFSFFTQTAPEGVAIATDISSYLDFALALFLAFGVCFEVPIAIILLCWTGVTTVKALSEKRPYIIVVAFFIGMLLTPPDVFSQTLLAVPMCLLFELGLLVARFYQPKDDESAVENNDESEKTQ
>LS483392.1|SQG37107.1|1849061_1849622_-|sec-independent-translocase
MFDIGFSELILLMILGLVVLGPKRLPIAIRTVMDWVKTIRGLAANVQNELKQELKLQELQDSIKKAESLNLQALSPELSKTVEELKARADKMKAELEDKAVQAGTTVEDQIKEIKSAAENAEKPQNAISVEEAAETLSEAEKTPTDLTALETHEKAELNTHLSSYYPPDDIEIAPASKSQSSKTKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1098404 : 1191972

Mannheimia_phage(27.27%)

portal,holin,head,lysis,capsid,terminase,protease,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG36329.1\|1098404_1098869_+\|protease	metalloprotease	NA	NA	NA	NA
SQG36330.1\|1098887_1099673_+	haloacid dehalogenase-like protein	NA	NA	NA	NA
SQG36331.1\|1099709_1101509_-	long chain fatty acid CoA ligase	A0A1V0SBX8	Catovirus	7.4e-44	26.2
SQG36332.1\|1101702_1102722_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
SQG36333.1\|1102972_1103599_+	guanylate kinase	K4JYM5	Abalone_herpesvirus	1.5e-20	36.2
SQG36334.1\|1103661_1103928_+	RNA polymerase subunit omega	NA	NA	NA	NA
SQG36335.1\|1104347_1106462_+	bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	2.5e-11	38.8
SQG36336.1\|1106458_1108540_+	ATP-dependent DNA helicase	NA	NA	NA	NA
SQG36337.1\|1108569_1109379_+	glutamate racemase	NA	NA	NA	NA
SQG36338.1\|1109589_1110735_+	L-lactate dehydrogenase, FMN-linked	NA	NA	NA	NA
SQG36339.1\|1116544_1117474_+	DNA-binding transcriptional activator, homocysteine-binding	NA	NA	NA	NA
SQG36340.1\|1117483_1118203_+	branched-chain amino acid permease	NA	NA	NA	NA
SQG36341.1\|1118199_1118613_+	branched-chain amino acid permease	NA	NA	NA	NA
SQG36342.1\|1118630_1118864_+	L-lactate dehydrogenase	NA	NA	NA	NA
SQG36343.1\|1118939_1120523_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	1.2e-29	26.0
SQG36344.1\|1120795_1121584_+	enoyl-ACP reductase	NA	NA	NA	NA
SQG36345.1\|1121663_1123643_+	ribonuclease II	NA	NA	NA	NA
SQG36346.1\|1123697_1125335_+	Adhesin Hia	NA	NA	NA	NA
SQG36347.1\|1125571_1126213_+	allophanate hydrolase subunit 1	NA	NA	NA	NA
SQG36348.1\|1126209_1127139_+	allophanate hydrolase subunit 2	NA	NA	NA	NA
SQG36349.1\|1127125_1127863_+	lactam utilization protein	NA	NA	NA	NA
SQG36350.1\|1127906_1129100_+	Mn2+ and Fe2+ transporter of the NRAMP family	NA	NA	NA	NA
SQG36351.1\|1129176_1130511_-	argininosuccinate synthetase	A0A140XAJ5	Dickeya_phage	6.4e-53	79.4
SQG36352.1\|1130687_1131560_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	A0A0M4JBD3	Mollivirus	7.4e-50	35.7
SQG36353.1\|1131724_1134073_-	penicillin-binding protein 1b	NA	NA	NA	NA
SQG36354.1\|1134079_1134478_-	Uncharacterised protein family (UPF0231)	NA	NA	NA	NA
SQG36355.1\|1134434_1134779_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	1.7e-26	48.6
SQG36356.1\|1134915_1135722_+	methionine aminopeptidase	NA	NA	NA	NA
SQG36357.1\|1135814_1138406_+	uridylyltransferase	NA	NA	NA	NA
SQG36358.1\|1138556_1138778_-	Sel1 domain-containing protein	NA	NA	NA	NA
SQG36359.1\|1139297_1140365_+	UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase	NA	NA	NA	NA
SQG36360.1\|1140762_1141311_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	7.0e-30	41.2
SQG36361.1\|1141381_1142422_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
SQG36362.1\|1142579_1142837_+	phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)	NA	NA	NA	NA
SQG36363.1\|1142916_1144644_+	PEP-protein phosphotransferase of PTS system (enzyme I)	A0A1V0SGR7	Hokovirus	1.3e-16	32.6
SQG36364.1\|1144703_1145204_+	glucose-specific enzyme IIA component of PTS	NA	NA	NA	NA
SQG36365.1\|1145550_1145916_+	putative outer membrane protein	NA	NA	NA	NA
SQG36366.1\|1145979_1146645_+	DNA-binding response regulator in two-component regulatory system with QseC	NA	NA	NA	NA
SQG36367.1\|1146641_1147997_+	sensory histidine kinase in two-component regulatory system with QseB	NA	NA	NA	NA
SQG36368.1\|1148355_1150299_+\|holin	choline transporter of high affinity	A0A2I7QNT1	Vibrio_phage	2.0e-18	24.8
SQG36369.1\|1150335_1151811_-	aminopeptidase A	Q6GYZ8	Mycoplasma_phage	1.1e-45	35.2
SQG36370.1\|1151917_1153021_+	permease	NA	NA	NA	NA
SQG36371.1\|1153017_1154094_+	permease	NA	NA	NA	NA
SQG36372.1\|1154287_1156558_+	5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase	NA	NA	NA	NA
SQG36373.1\|1157201_1157984_-\|portal	portal vertex protein	Q19UT6	Mannheimia_phage	1.3e-93	64.4
SQG36374.1\|1158070_1159111_-	Terminase, ATPase subunit	Q19UT5	Mannheimia_phage	1.3e-114	58.9
SQG36375.1\|1159647_1159833_+\|capsid	Probable bacteriophage capsid scaffolding protein	NA	NA	NA	NA
SQG36376.1\|1159854_1160904_+\|capsid	major capsid protein	Q19UT3	Mannheimia_phage	2.8e-88	51.3
SQG36377.1\|1160915_1161401_+\|terminase	terminase, endonuclease subunit	Q19US0	Mannheimia_phage	1.0e-24	43.5
SQG36378.1\|1161779_1162286_+\|head	putative phage head completion	A0A0M3LNL8	Mannheimia_phage	3.7e-33	51.0
SQG36379.1\|1162285_1162495_+\|tail	Probable bacteriophage tail protein X	A0A1S6KZY4	Salmonella_phage	3.5e-06	40.6
SQG36380.1\|1162496_1162718_+\|holin	holin	NA	NA	NA	NA
SQG36381.1\|1162710_1163229_+	phage-like lysozyme	A0A0M3LPQ1	Mannheimia_phage	4.3e-37	46.6
SQG36382.1\|1163213_1163564_+\|lysis	phage lysis regulatory protein, LysB family	NA	NA	NA	NA
SQG36383.1\|1163738_1164035_+	putative zinc finger DksA/TraR C4-type	NA	NA	NA	NA
SQG36384.1\|1164547_1164943_+\|tail	phage-related tail protein	NA	NA	NA	NA
SQG36385.1\|1165044_1165320_+\|tail	phage-related tail protein	NA	NA	NA	NA
SQG36386.1\|1165356_1166484_+\|tail	phage-like tail protein	V5YUN9	Pseudomonas_phage	3.5e-44	37.2
SQG36387.1\|1166619_1167993_-	Na+-dependent transporters of the SNF family	NA	NA	NA	NA
SQG36388.1\|1168051_1168687_-	DNA glycosylase and apyrimidinic (AP) lyase	NA	NA	NA	NA
SQG36389.1\|1168866_1169574_-	inner membrane NADH-quinone reductase	NA	NA	NA	NA
SQG36390.1\|1169575_1170199_-	oxidoreductase	NA	NA	NA	NA
SQG36391.1\|1170198_1171275_-	inner membrane oxidoreductase	NA	NA	NA	NA
SQG36392.1\|1171279_1173760_-	electron transport complex protein RnfC	NA	NA	NA	NA
SQG36393.1\|1173760_1174342_-	electron transport complex protein RnfB	NA	NA	NA	NA
SQG36394.1\|1174429_1175008_-	inner membrane subunit	NA	NA	NA	NA
SQG36395.1\|1175355_1176417_-	inner membrane peptidase	A0A2H4UUF9	Bodo_saltans_virus	7.4e-20	31.7
SQG36396.1\|1176616_1177282_+	Uncharacterized protein conserved in bacteria (DUF2057)	NA	NA	NA	NA
SQG36397.1\|1177349_1179506_+	inner membrane protein	NA	NA	NA	NA
SQG36398.1\|1179603_1180146_-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	NA	NA	NA
SQG36399.1\|1180155_1181091_-	arabinose-5-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.2e-42	35.5
SQG36400.1\|1181704_1182376_-	regulator of cell morphogenesis and cell wall metabolism	NA	NA	NA	NA
SQG36401.1\|1183924_1184407_+	molybdopterin biosynthesis, protein C	NA	NA	NA	NA
SQG36402.1\|1184408_1184654_+	molybdopterin synthase, small subunit	NA	NA	NA	NA
SQG36403.1\|1184654_1185107_+	molybdopterin synthase, large subunit	NA	NA	NA	NA
SQG36404.1\|1185161_1187807_-	paraquat-inducible protein B-like protein	NA	NA	NA	NA
SQG36405.1\|1187790_1188873_-	paraquat-inducible protein A-like protein	NA	NA	NA	NA
SQG36406.1\|1189224_1189863_+	structural transport element	NA	NA	NA	NA
SQG36407.1\|1189890_1191972_+\|protease	carboxy-terminal protease	A0A0R6PIZ1	Moraxella_phage	4.2e-83	32.3

DBSCAN-SWA_2

1246539 : 1426569

232

Mannheimia_phage(31.93%)

portal,integrase,tRNA,holin,head,lysis,terminase,capsid,transposase,plate,protease,tail

attL 1311330:1311349|attR 1431809:1431828

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG36459.1\|1246539_1247727_+\|tRNA	tyrosyl-tRNA synthetase	NA	NA	NA	NA
SQG36460.1\|1247790_1248738_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	1.8e-41	34.4
SQG36461.1\|1248739_1249693_-	4-diphosphocytidyl-2-methyl-D-erythritol synthase	NA	NA	NA	NA
SQG36462.1\|1249692_1250322_-	molecular chaperone LolB	NA	NA	NA	NA
SQG36463.1\|1250377_1251634_-\|tRNA	fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase	A0A0F6YPT7	Sinorhizobium_phage	1.1e-94	47.0
SQG36464.1\|1251640_1252252_-	signal transduction protein (SH3 domain)	NA	NA	NA	NA
SQG36465.1\|1252317_1253580_-	putative phosphate permease	E5ESL8	Bathycoccus_sp._RCC1105_virus	2.7e-29	35.4
SQG36466.1\|1253604_1254285_-	phosphate transport regulator	NA	NA	NA	NA
SQG36467.1\|1254507_1254948_+	membrane protein	NA	NA	NA	NA
SQG36468.1\|1254986_1255274_+	Uncharacterized low-complexity protein	NA	NA	NA	NA
SQG36469.1\|1255334_1256258_+	Protein of uncharacterised function (DUF692)	NA	NA	NA	NA
SQG36470.1\|1256247_1256964_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQG36471.1\|1257285_1258332_+	adenylate cyclase	NA	NA	NA	NA
SQG36472.1\|1258787_1260164_+	repair protein	NA	NA	NA	NA
SQG36473.1\|1260243_1260723_+	DNA-binding transcriptional dual regulator, leucine-binding	NA	NA	NA	NA
SQG36474.1\|1260724_1263484_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.5e-83	42.3
SQG36475.1\|1263501_1264119_+	chaperone for lipoproteins	NA	NA	NA	NA
SQG36476.1\|1264179_1265520_+	recombination factor protein RarA	G3MBE0	Bacillus_virus	9.6e-81	39.6
SQG36477.1\|1265609_1266752_-	Uncharacterised protein	NA	NA	NA	NA
SQG36478.1\|1266761_1267985_-	modification methylase BepI-like	E5EQN8	Micromonas_sp._RCC1109_virus	4.1e-46	34.2
SQG36479.1\|1268238_1269537_-	5-enolpyruvylshikimate-3-phosphate synthetase	NA	NA	NA	NA
SQG36480.1\|1269536_1270373_-	formyltetrahydrofolate hydrolase	NA	NA	NA	NA
SQG36481.1\|1270443_1270848_-	DNA binding protein	NA	NA	NA	NA
SQG36482.1\|1271298_1272819_+	Na+/H+ antiporter	NA	NA	NA	NA
SQG36483.1\|1273085_1274807_+	acetolactate synthase III, large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.8e-56	29.0
SQG36484.1\|1274806_1275298_+	acetolactate synthase III, thiamin-dependent, small subunit	NA	NA	NA	NA
SQG36485.1\|1275583_1277317_-\|tRNA	arginyl-tRNA synthetase	A0A2K9L2F0	Tupanvirus	6.8e-87	35.4
SQG36486.1\|1277396_1277966_+	metal-binding protein	NA	NA	NA	NA
SQG36487.1\|1277971_1278061_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
SQG36488.1\|1278044_1278269_+	lipoprotein	NA	NA	NA	NA
SQG36489.1\|1278291_1278756_+	outer membrane lipoprotein PCP	NA	NA	NA	NA
SQG36490.1\|1278881_1279940_-	UDP-GlcNAc--lipooligosaccharide N-acetylglucosamine glycosyltransferase	A0A1V0SAH6	Catovirus	4.8e-11	38.5
SQG36491.1\|1280257_1280356_-\|transposase	IS1016 transposase	NA	NA	NA	NA
SQG36492.1\|1280590_1282240_-	glucosephosphate isomerase	NA	NA	NA	NA
SQG36493.1\|1282336_1283419_-	alanine racemase 1, PLP-binding, biosynthetic	A0A0P0YM39	Yellowstone_lake_mimivirus	1.6e-33	30.4
SQG36494.1\|1283428_1284835_-	replicative DNA helicase	O80281	Escherichia_phage	4.4e-169	68.3
SQG36495.1\|1284973_1286410_-	pyruvate kinase	NA	NA	NA	NA
SQG36496.1\|1286940_1287942_+\|integrase	putative integrase/recombinase	A0A0M3LRG1	Mannheimia_phage	9.2e-113	62.5
SQG36497.1\|1287972_1288257_-	Uncharacterised protein	A0A0M3LQ35	Mannheimia_phage	3.2e-18	50.0
SQG36498.1\|1288256_1288778_-	Uncharacterised protein	A0A0M3LTD8	Mannheimia_phage	1.6e-28	41.8
SQG36499.1\|1288790_1289000_-	Uncharacterised protein	NA	NA	NA	NA
SQG36500.1\|1289010_1289202_-	Uncharacterised protein	NA	NA	NA	NA
SQG36501.1\|1289220_1291407_-	Probable bacteriophage replication protein A	Q94N00	Haemophilus_virus	4.6e-165	42.1
SQG36502.1\|1291416_1291725_-	Uncharacterised protein	NA	NA	NA	NA
SQG36503.1\|1291740_1291854_-	Uncharacterised protein	NA	NA	NA	NA
SQG36504.1\|1291850_1292093_-	Uncharacterised protein	NA	NA	NA	NA
SQG36505.1\|1292096_1292477_-	Uncharacterised protein	NA	NA	NA	NA
SQG36506.1\|1292494_1292755_-	Uncharacterised protein	NA	NA	NA	NA
SQG36507.1\|1292847_1293138_-	Uncharacterised protein	NA	NA	NA	NA
SQG36508.1\|1293264_1293507_+	Uncharacterised protein	NA	NA	NA	NA
SQG36509.1\|1293503_1293743_-	Uncharacterized protein conserved in bacteria, prophage-related	NA	NA	NA	NA
SQG36510.1\|1293878_1294586_+	phage repressor	A0A0M3LPF9	Mannheimia_phage	3.7e-31	35.9
SQG36511.1\|1294594_1295101_+	BRCT domain type II	Q19UP0	Mannheimia_phage	1.3e-35	43.7
SQG36512.1\|1295097_1295337_+	Excalibur calcium-binding domain	NA	NA	NA	NA
SQG36513.1\|1295362_1296556_-	regulator of late gene expression	R9QBT3	Mannheimia_phage	5.7e-101	50.3
SQG36514.1\|1296555_1296993_-\|tail	phage-related tail protein	A0A0M3LQ18	Mannheimia_phage	3.5e-40	57.4
SQG36515.1\|1296992_1297154_-	Uncharacterised protein	NA	NA	NA	NA
SQG36516.1\|1297321_1297468_-\|tail	Probable bacteriophage tail protein E+E'	E5E3Q0	Burkholderia_phage	2.2e-07	65.0
SQG36517.1\|1297467_1297767_-\|tail	Probable bacteriophage tail protein E	A0A0F7LBN9	Escherichia_phage	9.7e-10	40.7
SQG36518.1\|1297850_1298357_-\|tail	phage-related tail protein	Q19UP8	Mannheimia_phage	1.2e-52	58.9
SQG36519.1\|1298360_1299545_-\|tail	phage tail sheath-like protein	A0A1S6KZY7	Salmonella_phage	1.3e-102	48.5
SQG36520.1\|1300226_1300490_+	Uncharacterised protein	F6MIM3	Haemophilus_phage	2.1e-32	77.9
SQG36521.1\|1300528_1301374_-	D12 class N6 adenine-specific DNA methyltransferase	F6MIM2	Haemophilus_phage	1.2e-118	72.1
SQG36522.1\|1301435_1301555_-	mu com-like protein	NA	NA	NA	NA
SQG36523.1\|1301730_1302219_-	Uncharacterised protein	F6MIM0	Haemophilus_phage	6.8e-45	54.4
SQG36524.1\|1302211_1302820_-	Uncharacterised protein	Q94MX9	Haemophilus_virus	7.4e-81	80.0
SQG36525.1\|1302831_1305369_-\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	8.8e-168	52.4
SQG36526.1\|1305377_1305917_-\|tail	Probable bacteriophage tail protein gpI	Q19UQ4	Mannheimia_phage	2.1e-50	53.4
SQG36527.1\|1305903_1306818_-\|plate	phage-like baseplate assembly protein	Q19UQ5	Mannheimia_phage	7.9e-95	59.9
SQG36528.1\|1306814_1307153_-\|plate	baseplate assembly protein W	Q19UQ6	Mannheimia_phage	5.8e-19	56.6
SQG36529.1\|1307154_1307748_-\|plate	phage P2-like baseplate assembly protein	A0A0M3LPY9	Mannheimia_phage	4.6e-43	65.5
SQG36530.1\|1307856_1310595_-\|tail	phage-like tail protein	V5YUN9	Pseudomonas_phage	2.7e-82	35.4
SQG36531.1\|1310665_1310938_+	Uncharacterised protein	NA	NA	NA	NA
SQG36532.1\|1310915_1311374_-\|tail	Probable bacteriophage tail completion protein	A0A2H4J927	uncultured_Caudovirales_phage	4.6e-27	51.1
1311330:1311349	attL	NA	NA	NA	NA
SQG36533.1\|1311373_1311844_-\|tail	Probable bacteriophage tail completion protein	E5G6N3	Salmonella_phage	5.6e-28	47.1
SQG36534.1\|1311840_1312056_-	DnaK suppressor protein	A0A0M3LS11	Mannheimia_phage	1.4e-10	47.9
SQG36535.1\|1312230_1312581_-\|lysis	phage lysis regulatory protein, LysB family	NA	NA	NA	NA
SQG36536.1\|1312565_1313084_-	phage-like lysozyme	A0A0M3LPQ1	Mannheimia_phage	4.3e-37	46.6
SQG36537.1\|1313076_1313298_-\|holin	holin	NA	NA	NA	NA
SQG36538.1\|1313299_1313509_-\|tail	Probable bacteriophage tail protein X	A0A1S6KZY4	Salmonella_phage	3.5e-06	40.6
SQG36539.1\|1313508_1314015_-\|head	putative phage head completion	A0A0M3LNL8	Mannheimia_phage	3.7e-33	51.0
SQG36540.1\|1314307_1314970_-\|terminase	terminase, endonuclease subunit	Q19US0	Mannheimia_phage	7.1e-45	45.8
SQG36541.1\|1314969_1316001_-\|capsid	major capsid protein	Q19UT3	Mannheimia_phage	2.0e-102	56.6
SQG36542.1\|1316011_1316839_-\|capsid	Probable bacteriophage capsid scaffolding protein	Q19UT4	Mannheimia_phage	7.5e-68	52.9
SQG36543.1\|1317003_1318779_+	Terminase, ATPase subunit	A0A0M3LRV4	Mannheimia_phage	2.5e-217	64.3
SQG36544.1\|1318788_1319799_+\|portal	portal vertex protein	Q19UT6	Mannheimia_phage	1.4e-116	60.4
SQG36545.1\|1320473_1321664_+\|integrase	prophage CP4-57-like integrase	A0A1V0E8G8	Vibrio_phage	5.7e-69	37.0
SQG36546.1\|1321717_1321918_-	Predicted transcriptional regulator	NA	NA	NA	NA
SQG36547.1\|1322044_1322293_-	Uncharacterised protein	NA	NA	NA	NA
SQG36548.1\|1322366_1322489_-	Uncharacterised protein	NA	NA	NA	NA
SQG36549.1\|1322501_1322693_-	Uncharacterised protein	NA	NA	NA	NA
SQG36550.1\|1322866_1323550_-	C5 methylase	A0A141DZL1	Streptococcus_phage	7.5e-66	57.5
SQG36551.1\|1323539_1323695_-	Uncharacterised protein	NA	NA	NA	NA
SQG36552.1\|1323691_1324051_-	Uncharacterised protein	NA	NA	NA	NA
SQG36553.1\|1324047_1324284_-	Uncharacterised protein	NA	NA	NA	NA
SQG36554.1\|1324604_1324784_+	Uncharacterised protein	Q19US2	Mannheimia_phage	1.8e-11	62.1
SQG36555.1\|1324843_1325278_-	ssDNA-binding protein	S5M9Z7	Pseudoalteromonas_phage	1.2e-19	41.7
SQG36556.1\|1325277_1325922_-	Uncharacterised protein	A0A0M3LP90	Mannheimia_phage	7.6e-84	70.5
SQG36557.1\|1326130_1326751_-	prophage antirepressor	Q7Y5X0	Haemophilus_phage	2.7e-46	48.8
SQG36558.1\|1327113_1327206_-	Uncharacterised protein	NA	NA	NA	NA
SQG36559.1\|1327209_1327701_-	putative Lhr family helicase, phage associatd	NA	NA	NA	NA
SQG36560.1\|1327840_1327972_-	Uncharacterised protein	NA	NA	NA	NA
SQG36561.1\|1328221_1328440_+	Uncharacterised protein	NA	NA	NA	NA
SQG36562.1\|1328399_1328570_-	Uncharacterised protein	NA	NA	NA	NA
SQG36563.1\|1328849_1329071_-	Uncharacterised protein	NA	NA	NA	NA
SQG36564.1\|1329085_1329256_+	Uncharacterized conserved protein	NA	NA	NA	NA
SQG36565.1\|1329709_1330618_-	Uncharacterised protein	A0A1R3Y6Z6	Salmonella_virus	1.5e-56	39.9
SQG36566.1\|1330819_1331512_-	phage repressor	F1C5C2	Cronobacter_phage	5.4e-19	30.8
SQG36567.1\|1331617_1331866_+	phage transcriptional regulatory protein/antirepressor Cro	Q19UN8	Mannheimia_phage	3.6e-10	50.0
SQG36568.1\|1331886_1332183_+	phage aaphi23	Q7Y5W3	Haemophilus_phage	1.3e-30	69.4
SQG36569.1\|1332230_1332899_+	Probable phage repressor protein	D0UIL6	Aggregatibacter_phage	3.7e-57	53.8
SQG36570.1\|1332895_1333654_+	Uncharacterised protein	D0UIL5	Aggregatibacter_phage	4.8e-61	68.8
SQG36571.1\|1333638_1334280_+	phage replication protein	NA	NA	NA	NA
SQG36572.1\|1334276_1334858_+	DNA methylase	A0A0M3LNW2	Mannheimia_phage	1.9e-49	56.1
SQG36573.1\|1334847_1335264_+	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.6e-55	77.4
SQG36574.1\|1335356_1335905_+	ning recombination protein	D0UIK8	Aggregatibacter_phage	5.1e-65	68.2
SQG36575.1\|1335906_1336275_+	putative phage anti-termination protein Q	Q7Y5V5	Haemophilus_phage	1.5e-36	62.6
SQG36576.1\|1336440_1336998_+	Uncharacterized conserved protein	A0A1S5SAB0	Streptococcus_phage	2.6e-24	36.7
SQG36577.1\|1337126_1337588_+	Uncharacterized conserved protein	NA	NA	NA	NA
SQG36578.1\|1337897_1338761_+	putative antirepressor protein	Q0H8C7	Salmonella_phage	3.3e-58	45.4
SQG36579.1\|1339028_1339280_+	Uncharacterised protein	NA	NA	NA	NA
SQG36580.1\|1339260_1339803_+	DLP12 prophage lysozyme	A0A0M3LPQ1	Mannheimia_phage	3.1e-46	52.0
SQG36581.1\|1339775_1340111_+	putative bacteriophage protein	Q7Y5U9	Haemophilus_phage	1.5e-27	66.7
SQG36582.1\|1340574_1341048_+	Protein of uncharacterised function (DUF1441)	K7PJY2	Enterobacterial_phage	1.9e-39	53.0
SQG36583.1\|1341050_1343171_+	gifsy-2 prophage protein	K7PH52	Enterobacterial_phage	4.9e-273	66.7
SQG36584.1\|1343167_1343386_+	Uncharacterised protein	NA	NA	NA	NA
SQG36585.1\|1343389_1344913_+\|capsid	putative phage capsid protein	K7PJP3	Enterobacteria_phage	7.1e-157	58.1
SQG36586.1\|1344884_1346891_+\|protease	atp-dependent clp protease proteolytic subunit	A0A1W6JT88	Pseudomonas_phage	8.4e-198	56.6
SQG36587.1\|1346969_1347293_+	putative RecA/RadA recombinase	NA	NA	NA	NA
SQG36588.1\|1347273_1347585_+\|tail	putative bacteriophage tail protein	NA	NA	NA	NA
SQG36589.1\|1347587_1348118_+\|tail	putative phage minor tail protein	M9NZH5	Enterobacteria_phage	2.9e-17	42.4
SQG36590.1\|1348126_1348537_+\|tail	minor tail protein u	NA	NA	NA	NA
SQG36591.1\|1348539_1349190_+	phage protein	NA	NA	NA	NA
SQG36592.1\|1349303_1349465_+	Uncharacterised protein	NA	NA	NA	NA
SQG36593.1\|1349464_1349872_+	phage protein	NA	NA	NA	NA
SQG36594.1\|1349916_1350141_+	phage protein	NA	NA	NA	NA
SQG36595.1\|1350209_1350593_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQG36596.1\|1350576_1350879_+	transcription regulator	NA	NA	NA	NA
SQG36597.1\|1350891_1351131_+	Uncharacterised protein	NA	NA	NA	NA
SQG36598.1\|1351432_1351681_+	Uncharacterised protein	NA	NA	NA	NA
SQG36599.1\|1351759_1355101_+\|tail	putative tail protein	A0A0E3JPV7	Enterobacteria_phage	5.0e-70	28.0
SQG36600.1\|1355109_1355445_+\|tail	putative phage minor tail protein	NA	NA	NA	NA
SQG36601.1\|1355496_1356147_+\|tail	phage-like minor tail protein L	J9Q7Y5	Salmonella_phage	1.3e-38	40.6
SQG36602.1\|1356148_1356856_+\|tail	phage-like tail assembly protein K	Q3HQU3	Burkholderia_phage	2.1e-50	44.3
SQG36603.1\|1356794_1357514_+\|tail	putative phage tail assembly protein	G8C7R3	Escherichia_phage	1.4e-33	40.7
SQG36604.1\|1357517_1358936_+\|tail	phage tail protein/putative Fels-1 prophage host specificity protein	A0A0R6PIC9	Moraxella_phage	5.5e-111	42.4
SQG36605.1\|1359000_1360248_+	Uncharacterized conserved protein	NA	NA	NA	NA
SQG36606.1\|1360300_1360576_+	Uncharacterised protein	NA	NA	NA	NA
SQG36607.1\|1361039_1361270_+	Predicted transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	9.8e-10	47.9
SQG36608.1\|1361262_1362324_+	DNA-cytosine methyltransferase	M1PSQ0	Streptococcus_phage	3.4e-65	42.2
SQG36609.1\|1362342_1363566_+	DNA-cytosine methyltransferase	G3CB01	Aeropyrum_pernix_spindle-shaped_virus	6.3e-31	28.0
SQG36610.1\|1363579_1365292_+	5-methylcytosine-specific restriction enzyme B	M1NSM1	Streptococcus_phage	6.1e-32	31.7
SQG36611.1\|1365307_1366531_+	LlaJI restriction endonuclease	NA	NA	NA	NA
SQG36612.1\|1366601_1368278_+	chromosome segregation protein	NA	NA	NA	NA
SQG36613.1\|1368274_1368814_+	UvrD/REP helicase	NA	NA	NA	NA
SQG36614.1\|1368997_1369342_+	Uncharacterised protein	NA	NA	NA	NA
SQG36615.1\|1369369_1369831_+	TFIIB zinc-binding	NA	NA	NA	NA
SQG36616.1\|1369820_1370627_+	Uncharacterised protein	NA	NA	NA	NA
SQG36617.1\|1370661_1371993_-	relaxase/mobilization nuclease family protein	NA	NA	NA	NA
SQG36618.1\|1371993_1372353_-	Uncharacterised protein	NA	NA	NA	NA
SQG36619.1\|1372685_1372946_+	Arsenical resistance operon repressor	NA	NA	NA	NA
SQG36620.1\|1373239_1373653_+	RNA polymerase sigma factor, sigma-70 family	NA	NA	NA	NA
SQG36621.1\|1373817_1376121_+	Superfamily II helicase	NA	NA	NA	NA
SQG36622.1\|1376117_1376354_+	Uncharacterised protein	NA	NA	NA	NA
SQG36623.1\|1376862_1377018_+	Uncharacterised protein	NA	NA	NA	NA
SQG36624.1\|1377116_1378430_+	Recombinase	A0A0S2SXR4	Bacillus_phage	1.4e-23	27.1
SQG36625.1\|1378395_1378821_+	Uncharacterised protein	NA	NA	NA	NA
SQG36626.1\|1378820_1379267_+	Resolvase, N terminal domain	NA	NA	NA	NA
SQG36627.1\|1379283_1380486_+	Recombinase	D2XR37	Bacillus_phage	1.5e-13	24.5
SQG36628.1\|1380478_1380919_+	Resolvase, N terminal domain	D2IZV7	Enterococcus_phage	2.3e-07	35.6
SQG36629.1\|1380887_1381082_+	Uncharacterised protein	NA	NA	NA	NA
SQG36630.1\|1381502_1382207_-	phage repressor	F6MII3	Haemophilus_phage	2.8e-39	37.8
SQG36631.1\|1382402_1382666_+	DNA-binding protein	F6MII4	Haemophilus_phage	7.4e-30	72.4
SQG36632.1\|1382679_1383558_+\|transposase	phage transposase	F6MII5	Haemophilus_phage	1.1e-85	56.9
SQG36633.1\|1383554_1384655_+\|transposase	phage transposase	A0A0M3LPN5	Mannheimia_phage	6.4e-115	56.4
SQG36634.1\|1384666_1385548_+\|transposase	phage transposase	A0A0M3LP72	Mannheimia_phage	8.4e-118	75.1
SQG36635.1\|1385558_1385855_+	sulfate transport protein cysz	NA	NA	NA	NA
SQG36636.1\|1385863_1386055_+	Uncharacterised protein	F6MII8	Haemophilus_phage	9.5e-11	57.6
SQG36637.1\|1386055_1386673_+	sulfate transport protein cysz	A0A0M3LQ92	Mannheimia_phage	3.1e-66	59.1
SQG36638.1\|1386857_1387067_+	Uncharacterised protein	NA	NA	NA	NA
SQG36639.1\|1387059_1387224_+	Uncharacterised protein	NA	NA	NA	NA
SQG36640.1\|1387220_1387475_+	Uncharacterised protein	NA	NA	NA	NA
SQG36641.1\|1387471_1387642_+	Uncharacterised protein	NA	NA	NA	NA
SQG36642.1\|1387638_1388100_+	Uncharacterised protein	NA	NA	NA	NA
SQG36643.1\|1388110_1388665_+	Uncharacterised protein	NA	NA	NA	NA
SQG36644.1\|1388677_1388926_+	Uncharacterised protein	NA	NA	NA	NA
SQG36645.1\|1389031_1389580_+	Uncharacterised protein	A0A0M3LPP6	Mannheimia_phage	7.4e-48	50.8
SQG36646.1\|1389569_1389974_+	Mu-like phage E16 protein	F6MIJ6	Haemophilus_phage	8.2e-20	41.4
SQG36647.1\|1390075_1390663_+	Uncharacterised protein	NA	NA	NA	NA
SQG36648.1\|1390723_1391272_-	Uncharacterised protein	NA	NA	NA	NA
SQG36649.1\|1391395_1391824_+	Mor transcription activator family	F6MIJ8	Haemophilus_phage	4.3e-27	42.3
SQG36650.1\|1391904_1392411_+	hypothetical bacteriophage protein	A0A0M3LSH2	Mannheimia_phage	2.5e-58	67.9
SQG36651.1\|1392400_1392568_+	Uncharacterised protein	NA	NA	NA	NA
SQG36652.1\|1392564_1392855_+	Protein of uncharacterised function (DUF2644)	F6MIK0	Haemophilus_phage	1.8e-16	61.3
SQG36653.1\|1392854_1393112_+	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA
SQG36654.1\|1393192_1393480_+	Uncharacterised protein	NA	NA	NA	NA
SQG36655.1\|1393479_1393746_+	Uncharacterised protein	NA	NA	NA	NA
SQG36656.1\|1393747_1394251_+	DNA-binding protein	F6MIK6	Haemophilus_phage	2.1e-44	51.2
SQG36657.1\|1394386_1395553_+	phage protein	B7SDN0	Haemophilus_phage	3.2e-181	79.6
SQG36658.1\|1395571_1396033_+	phage protein	A0A0M3LQB7	Mannheimia_phage	2.1e-56	74.0
SQG36659.1\|1396044_1397667_+	Mu-like prophage FluMu protein gp29	B7SDN1	Haemophilus_phage	4.1e-203	68.5
SQG36660.1\|1397650_1398952_+\|head	SPP1 family phage head morphogenesis protein	B7SDN5	Haemophilus_phage	6.7e-172	68.8
SQG36661.1\|1399086_1399503_+\|tail	phage virion morphogenesis (tail completion) protein	B7SDN8	Haemophilus_phage	6.2e-47	66.7
SQG36662.1\|1399782_1400820_+	Mu phage protein I	B7SDN9	Haemophilus_phage	1.2e-67	46.7
SQG36663.1\|1400819_1401743_+	Mu bacteriophage protein T	B7SDP1	Haemophilus_phage	6.7e-134	74.9
SQG36664.1\|1401806_1402112_+	Uncharacterised protein	B7SDP3	Haemophilus_phage	8.1e-20	49.0
SQG36665.1\|1402121_1402553_+	Mu-like prophage protein GP36	B7SDP4	Haemophilus_phage	2.7e-37	61.6
SQG36666.1\|1402536_1403199_+	Mu-like prophage protein gp37	A0A0M3LQJ7	Mannheimia_phage	1.6e-44	45.0
SQG36667.1\|1403170_1403353_+	Uncharacterised protein	A0A0M3LQM9	Mannheimia_phage	8.2e-12	64.8
SQG36668.1\|1403345_1404761_+\|tail	bacteriophage Mu tail sheath family protein	B7SDP8	Haemophilus_phage	2.3e-157	62.6
SQG36669.1\|1404770_1405142_+	Uncharacterised protein	A0A0M3LRV6	Mannheimia_phage	4.4e-36	64.2
SQG36670.1\|1405141_1405483_+	Uncharacterised protein	A0A0M3LSI2	Mannheimia_phage	5.3e-20	49.5
SQG36671.1\|1405750_1408039_+\|tail	phage tail length determination protein	A0A0M3LPB6	Mannheimia_phage	1.4e-95	34.0
SQG36672.1\|1408042_1409380_+	putative phage virion protein	F6MIL2	Haemophilus_phage	2.4e-108	45.1
SQG36673.1\|1409369_1410494_+	bacteriophage Mu P family protein	F6MIL3	Haemophilus_phage	3.5e-145	72.1
SQG36674.1\|1410503_1411139_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	2.1e-62	58.7
SQG36675.1\|1411208_1411559_+	phage GP46 family protein	A0A0M3LQK5	Mannheimia_phage	1.4e-44	75.0
SQG36676.1\|1411573_1412638_+\|tail	Mu phage tail protein gp47	F6MIL6	Haemophilus_phage	3.7e-128	66.6
SQG36677.1\|1412634_1413231_+	Uncharacterized protein conserved in bacteria (DUF2313)	F6MIL7	Haemophilus_phage	3.3e-65	62.4
SQG36678.1\|1413234_1415367_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	1.4e-214	63.8
SQG36679.1\|1415378_1415987_+	Uncharacterised protein	Q94MX9	Haemophilus_virus	1.1e-81	81.5
SQG36680.1\|1415979_1416465_+	Uncharacterised protein	F6MIM0	Haemophilus_phage	2.0e-44	53.5
SQG36681.1\|1417077_1418097_+	dihydro-orotate oxidase, FMN-linked	NA	NA	NA	NA
SQG36682.1\|1418096_1418921_+	TrpH	NA	NA	NA	NA
SQG36683.1\|1419016_1419625_-	Uncharacterised protein	NA	NA	NA	NA
SQG36684.1\|1419752_1421147_-	fumarate hydratase	NA	NA	NA	NA
SQG36685.1\|1421382_1421817_+	DNA polymerase III subunit chi	NA	NA	NA	NA
SQG36686.1\|1421901_1422072_+	Uncharacterised protein	NA	NA	NA	NA
SQG36687.1\|1422037_1422655_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQG36688.1\|1422681_1422996_+	ASCH domain	NA	NA	NA	NA
SQG36689.1\|1423018_1423657_+\|tRNA	valyl-tRNA synthetase	NA	NA	NA	NA
SQG36690.1\|1423704_1426569_+\|tRNA	valyl-tRNA synthetase	A0A1V0SK04	Klosneuvirus	2.3e-148	37.5
1431809:1431828	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1539879 : 1590958

Haemophilus_phage(35.29%)

tail,integrase,plate

attL 1537119:1537136|attR 1597106:1597123

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1537119:1537136	attL	NA	NA	NA	NA
SQG36791.1\|1539879_1540968_-	3-deoxy-D-arabino-heptulosonate-7-phosphate synthase	A0A0B6VT43	Edwardsiella_phage	2.9e-80	46.0
SQG36792.1\|1541987_1542251_+	Uncharacterised protein	F6MIM3	Haemophilus_phage	1.4e-33	79.1
SQG36793.1\|1542289_1543135_-	D12 class N6 adenine-specific DNA methyltransferase	F6MIM2	Haemophilus_phage	3.1e-117	70.7
SQG36794.1\|1543196_1543316_-	mu com-like protein	NA	NA	NA	NA
SQG36795.1\|1543491_1543992_-	Uncharacterised protein	F6MIM0	Haemophilus_phage	1.7e-51	61.6
SQG36796.1\|1543988_1544591_-	Uncharacterised protein	Q94MX9	Haemophilus_virus	3.0e-98	94.0
SQG36797.1\|1544602_1546828_-\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	5.2e-249	71.8
SQG36798.1\|1546837_1547413_-	Protein of uncharacterised function (DUF2612)	D0UIH4	Aggregatibacter_phage	4.1e-89	80.6
SQG36799.1\|1547412_1548555_-	Uncharacterized homolog of phage Mu protein gp47	Q7Y5S4	Haemophilus_phage	1.8e-184	86.6
SQG36800.1\|1548598_1549117_-	antirepressor protein	G0ZNF0	Cronobacter_phage	1.3e-30	49.2
SQG36801.1\|1549246_1549366_-	Uncharacterised protein	NA	NA	NA	NA
SQG36802.1\|1549446_1550307_-	antirepressor protein	A0A0M3LR56	Mannheimia_phage	4.3e-50	56.8
SQG36803.1\|1550611_1551928_-	chromosome segregation ATPase	X5JAC1	Clostridium_phage	7.0e-52	49.4
SQG36804.1\|1552055_1552409_-	Uncharacterised protein	Q7Y5S5	Haemophilus_phage	1.7e-58	89.7
SQG36805.1\|1552410_1552569_-	Uncharacterised protein	NA	NA	NA	NA
SQG36806.1\|1552663_1553308_-\|plate	phage baseplate assembly protein V	D0UIH7	Aggregatibacter_phage	1.3e-96	81.3
SQG36807.1\|1553304_1554189_-	Phage protein D	D0UIH8	Aggregatibacter_phage	1.3e-142	90.2
SQG36808.1\|1554191_1554302_-	Uncharacterised protein	NA	NA	NA	NA
SQG36809.1\|1554440_1554764_-	Uncharacterised protein	Q7Y5S9	Haemophilus_phage	1.3e-47	83.3
SQG36810.1\|1554757_1555534_-	Uncharacterised protein	Q7Y5T0	Haemophilus_phage	9.1e-76	71.4
SQG36811.1\|1555539_1557630_-	Uncharacterised protein	Q7Y5T2	Haemophilus_phage	3.8e-225	71.9
SQG36812.1\|1557780_1558191_-	Protein of uncharacterised function (DUF2669)	Q776V6	Haemophilus_phage	3.1e-51	72.3
SQG36813.1\|1558190_1558622_-	Protein of uncharacterised function (DUF3277)	Q7Y5T4	Haemophilus_phage	2.4e-70	92.3
SQG36814.1\|1558672_1560181_-	phage-like protein	Q7Y5T5	Haemophilus_phage	3.9e-248	86.7
SQG36815.1\|1560612_1560984_-	Uncharacterised protein	Q776V7	Haemophilus_phage	6.8e-45	71.5
SQG36816.1\|1560980_1561493_-	Uncharacterised protein	Q7Y5T8	Haemophilus_phage	2.7e-44	57.6
SQG36817.1\|1561493_1561856_-	Uncharacterised protein	Q7Y5T9	Haemophilus_phage	2.4e-34	67.2
SQG36818.1\|1561865_1562780_-	Uncharacterized protein conserved in bacteria	Q7Y5U0	Haemophilus_phage	4.4e-154	91.8
SQG36819.1\|1562790_1563234_-	Uncharacterised protein	D0UIJ1	Aggregatibacter_phage	1.3e-50	74.5
SQG36820.1\|1563247_1564351_-	Uncharacterized protein conserved in bacteria	D0UIJ2	Aggregatibacter_phage	5.2e-141	85.9
SQG36821.1\|1564440_1565874_-	plasmid RP4 TraN-like protein	Q7Y5U5	Haemophilus_phage	2.4e-85	73.0
SQG36822.1\|1565902_1567234_-	phage-associated protein, HI1409 family	D0UIJ6	Aggregatibacter_phage	2.2e-210	83.3
SQG36823.1\|1567235_1568639_-	Transposase and inactivated derivatives	Q7Y5U7	Haemophilus_phage	1.5e-249	88.4
SQG36824.1\|1568613_1569135_-	Uncharacterised protein	Q716H4	Shigella_phage	4.9e-33	52.8
SQG36825.1\|1569212_1569464_+	bacteriophage protein/plasmid stabilization system protein	A0A1S5NR91	Burkholderia_phage	9.9e-16	52.9
SQG36826.1\|1569447_1569795_+	transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	6.8e-23	57.0
SQG36827.1\|1569989_1570325_-	putative bacteriophage protein	Q7Y5U9	Haemophilus_phage	2.9e-18	51.0
SQG36828.1\|1570297_1570840_-	DLP12 prophage lysozyme	A0A0M3LPQ1	Mannheimia_phage	3.1e-46	52.0
SQG36829.1\|1570820_1571072_-	Uncharacterised protein	NA	NA	NA	NA
SQG36830.1\|1571328_1571838_-	Phage antitermination protein Q	NA	NA	NA	NA
SQG36831.1\|1571838_1572384_-	ning recombination protein	D0UIK8	Aggregatibacter_phage	4.5e-61	66.9
SQG36832.1\|1572383_1572473_-	Uncharacterised protein	NA	NA	NA	NA
SQG36833.1\|1572755_1573184_+	Uncharacterised protein family (UPF0150)	NA	NA	NA	NA
SQG36834.1\|1573184_1573694_-	Protein of uncharacterised function (DUF1367)	A0A0M3LR84	Mannheimia_phage	1.1e-69	76.2
SQG36835.1\|1573698_1574289_-	DNA methylase	A0A0M3LNW2	Mannheimia_phage	1.1e-49	56.1
SQG36836.1\|1574285_1574912_-	Replication protein P	A0A0M3LS65	Mannheimia_phage	3.7e-27	37.4
SQG36837.1\|1574908_1575631_-	Uncharacterised protein	D0UIL5	Aggregatibacter_phage	5.9e-61	68.3
SQG36838.1\|1575627_1576302_-	Probable phage repressor protein	D0UIL6	Aggregatibacter_phage	5.0e-62	55.6
SQG36839.1\|1576350_1576791_-	Uncharacterised protein	NA	NA	NA	NA
SQG36840.1\|1576845_1577085_-	regulatory protein	A0A2I6PIE5	Escherichia_phage	7.0e-11	49.2
SQG36841.1\|1577185_1577851_+	prophage repressor CI	A0A0M3LSL8	Mannheimia_phage	1.4e-40	52.1
SQG36842.1\|1577941_1578649_+	Uncharacterised protein	NA	NA	NA	NA
SQG36843.1\|1578645_1579461_+	Protein of uncharacterised function (DUF3037)	NA	NA	NA	NA
SQG36844.1\|1579560_1579728_-	Uncharacterised protein	NA	NA	NA	NA
SQG36845.1\|1580333_1580570_+	Uncharacterised protein	NA	NA	NA	NA
SQG36846.1\|1580566_1580833_-	Uncharacterised protein	A0A0N9STP5	Staphylococcus_phage	3.1e-07	34.9
SQG36847.1\|1581006_1581699_-	Uncharacterised protein	V5URE2	Shigella_phage	5.2e-14	27.2
SQG36848.1\|1581699_1581879_+	Uncharacterised protein	NA	NA	NA	NA
SQG36849.1\|1581984_1582248_+	Uncharacterised protein	NA	NA	NA	NA
SQG36850.1\|1582503_1583109_+	Putative prophage antirepressor protein	A0A0P0ZCS0	Stx2-converting_phage	2.8e-16	50.0
SQG36851.1\|1583196_1583487_+	Uncharacterised protein	NA	NA	NA	NA
SQG36852.1\|1583580_1583886_+	Uncharacterised protein	NA	NA	NA	NA
SQG36853.1\|1583882_1584176_+	Uncharacterised protein	NA	NA	NA	NA
SQG36854.1\|1584188_1585082_+	recombinational DNA repair protein, rece pathway	A0A0M3LNU3	Mannheimia_phage	8.8e-115	71.3
SQG36855.1\|1585083_1585734_+	Uncharacterised protein	A0A0M3LP90	Mannheimia_phage	5.8e-84	70.2
SQG36856.1\|1585733_1586168_+	ssDNA-binding protein	R9TP78	Rhizobium_phage	5.7e-19	37.4
SQG36857.1\|1586270_1586840_+	Uncharacterised protein	NA	NA	NA	NA
SQG36858.1\|1586836_1587073_+	Uncharacterised protein	NA	NA	NA	NA
SQG36859.1\|1587069_1587429_+	Uncharacterised protein	NA	NA	NA	NA
SQG36860.1\|1587436_1588711_+	cytosine-specific methyltransferase	A0A2I7QRH3	Vibrio_phage	7.7e-96	46.9
SQG36861.1\|1588768_1589251_+	Uncharacterised protein	A0A0M3LS47	Mannheimia_phage	1.1e-23	42.0
SQG36862.1\|1589696_1589975_+	Uncharacterised protein	NA	NA	NA	NA
SQG36863.1\|1589971_1590958_-\|integrase	integrase	A0A0M3LQN1	Mannheimia_phage	6.6e-95	55.3
1597106:1597123	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection