CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483393	Clostridium perfringens strain NCTC13170 genome assembly, chromosome: 1	4 crisprs	DEDDh,cas14j,cas2,csa3,cas3,c2c9_V-U4,DinG,cas1,cas9	1	13	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483393_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483393_1

334376-334464

Orphan

Consensus_repeat	Method
AGTTTTATATAAATCAATATAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483393_1

>merge|LS483393|1|334376-334464|CRISPRCasFinder
AGTTTTATATAAATCAATATAAATTTAAAATTGCAATTTCAAAAGCTAGATTAGGTATTGATAAAGAGTTTTATATAAATCAATGTAAA

>LS483393|1|1|334376-334464|CRISPRCasFinder
AGTTTTATATAAATCAATATAAA	TTTAAAATTGCAATTTCAAAAGCTAGATTAGGTATTGATAAAG
AGTTTTATATAAATCAATGTAAA

Protein	Signature genes	Signature genes Name	Protein_function
LS483393.1\|SQG37544.1\|333997_334294_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG37549.1\|344379_345192_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|224596
LS483393.1\|SQG37548.1\|343169_343916_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|234605
LS483393.1\|SQG37546.1\|335561_336290_+\|beta-hexosamidase-A	unknown	unknown	gnl\|CDD\|366858
LS483393.1\|SQG37539.1\|329323_329830_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
LS483393.1\|SQG37547.1\|342020_342488_-\|bacterioferritin-comigratory-protein	unknown	unknown	gnl\|CDD\|224146
LS483393.1\|SQG37551.1\|346395_347679_+\|glycoside-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|340856
LS483393.1\|SQG37535.1\|325690_326020_-\|Predicted-integral-membrane-protein	unknown	unknown	unknown
LS483393.1\|SQG37543.1\|332466_333780_-\|Protein-of-uncharacterised-function-(DUF1576).	unknown	unknown	gnl\|CDD\|377881
LS483393.1\|SQG37537.1\|327088_328231_+\|DNA-polymerase-III-subunit-epsilon	unknown	unknown	gnl\|CDD\|227091
LS483393.1\|SQG37552.1\|347697_348933_+\|glycoside-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|340856
LS483393.1\|SQG37541.1\|331146_331770_+\|copper-homeostasis-protein	unknown	unknown	gnl\|CDD\|225684
LS483393.1\|SQG37553.1\|348946_350128_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|213187
LS483393.1\|SQG37536.1\|326141_326873_-\|NAD-dependent-deacetylase	unknown	unknown	gnl\|CDD\|234777
LS483393.1\|SQG37538.1\|328489_329104_+\|galactoside-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
LS483393.1\|SQG37542.1\|332133_332346_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG37545.1\|334501_335179_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
LS483393.1\|SQG37550.1\|345209_346382_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|213187
LS483393.1\|SQG37540.1\|330013_331150_+\|mechanosensitive-ion-channel-protein-MscS	unknown	unknown	gnl\|CDD\|366370
LS483393.1\|SQG37554.1\|350242_351676_+\|glycoside-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|340856

Protein	Function_ID	Function_description	E-value
LS483393.1\|SQG37549.1\|344379_345192_+\|ABC-transporter	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.11533e-37
LS483393.1\|SQG37548.1\|343169_343916_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	1.6338e-32
LS483393.1\|SQG37539.1\|329323_329830_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	2.01008e-14
LS483393.1\|SQG37546.1\|335561_336290_+\|beta-hexosamidase-A	gnl\|CDD\|366858	pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.	0.00794479
LS483393.1\|SQG37547.1\|342020_342488_-\|bacterioferritin-comigratory-protein	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	9.48571e-79
LS483393.1\|SQG37551.1\|346395_347679_+\|glycoside-hydrolase-family-protein	gnl\|CDD\|340856	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	4.02463e-51
LS483393.1\|SQG37543.1\|332466_333780_-\|Protein-of-uncharacterised-function-(DUF1576).	gnl\|CDD\|377881	pfam07613, DUF1576, Protein of unknown function (DUF1576). This small family is found in several undescribed proteins. The alignment is distinguished by the frequent occurrence of conserved glycine and aromatic residues.	4.55612e-64
LS483393.1\|SQG37537.1\|327088_328231_+\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|227091	COG4748, COG4748, Uncharacterized conserved protein [Function unknown].	5.3452e-80
LS483393.1\|SQG37552.1\|347697_348933_+\|glycoside-hydrolase-family-protein	gnl\|CDD\|340856	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.34702e-58
LS483393.1\|SQG37541.1\|331146_331770_+\|copper-homeostasis-protein	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	7.93704e-89
LS483393.1\|SQG37553.1\|348946_350128_+\|ABC-transporter	gnl\|CDD\|213187	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system. The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenza) and a cytoplasmic membrane protein MPA2.	2.43573e-120
LS483393.1\|SQG37536.1\|326141_326873_-\|NAD-dependent-deacetylase	gnl\|CDD\|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	3.29219e-134
LS483393.1\|SQG37538.1\|328489_329104_+\|galactoside-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	9.98698e-97
LS483393.1\|SQG37550.1\|345209_346382_+\|ABC-transporter	gnl\|CDD\|213187	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system. The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenza) and a cytoplasmic membrane protein MPA2.	7.45112e-115
LS483393.1\|SQG37545.1\|334501_335179_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	3.08574e-148
LS483393.1\|SQG37540.1\|330013_331150_+\|mechanosensitive-ion-channel-protein-MscS	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.20339e-42
LS483393.1\|SQG37554.1\|350242_351676_+\|glycoside-hydrolase-family-protein	gnl\|CDD\|340856	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	4.54962e-54

>LS483393.1|SQG37544.1|333997_334294_-|Uncharacterised-protein
MKNYKDNDENFKLVPMNMKCNQEYSFMPMNKFNSNSMNLNPMINNNSNHSCCCMHNYVMKPSPYNNNYYENQMFPQNHTDNMMVKTLITVKKKSDLFD
>LS483393.1|SQG37543.1|332466_333780_-|Protein-of-uncharacterised-function-(DUF1576).
MLKRLPQEYLIHLILYISFIIFAFFLESPKEILNGLYNIISNSDILITDYISIGGFGATLINSALLGLIFIFLFYITDTKSTGKSIMSLWFLTGFGMFGKNIINIWPIVLGTFIYSKVKKKPFKDYLVIASLGTALAPTVSQFSFFPEVHPISGAIMGALVGIIVGFILPPIAKNASKIHSGFSLYNVGFAGGIIAIAVMSLMRAVGHDFETNSIWHKGNNILYMLFLFTISAYFIICSLILDKSKKSVLKDQIGINKEHGIFPSDFFSIYGSSCYFNMGVLCIFSTLFVLLINGDLNGPTIGAIFSMAGFGCYGKNLANSVPLIIGASLASLISISDINSPVTVVCILFSTGLAPISGYYGWPYGIIAGFLHIFMVFNIGELHGGLNLYNNGLASGFVAAIIVPVIESLQVTNTKNNLKDSSKRHPISLGIKKEAD
>LS483393.1|SQG37542.1|332133_332346_+|Uncharacterised-protein
MLEKMILSDKECEYLAKSIAGGVLIGLALGAIFNNPQFGFALGGVTGIVASLIYILVKRAKIKSDKKLIN
>LS483393.1|SQG37541.1|331146_331770_+|copper-homeostasis-protein
MTIKLEACVGNYKEGKRAEELGANRIELCDNLAQGGTTPSYGTILQCKKDINIDINVIIRPRGGNFVYSKEELNIMKNDIKLCKDIGVTGVVFGFLKEDNTLDYETTKEFVELAKPLSITFHMAFDEIENKVDALGKLIDLGVDRVLTKGGLDNAFKNKDTLKELVEHAKDKIIILPGGGVTKDNFLELKDYTNARELHGTKIVGNL
>LS483393.1|SQG37540.1|330013_331150_+|mechanosensitive-ion-channel-protein-MscS
MKELERLLGRLTIINIKEIIIILVIMIIVLIINKILINNLFKLLMRGARRTKNYLDNNIVRALENPLKLIVSFVGIYSIFKVINLDSLGIDFLSTYKILRVGIIVSFIYFAYNLTLENSLLYSKLHKNDGGNTIVFPFVSIIIRLIILLVGIIIIANEFGLTGFIAGLGVSGVAFALAAQDTCSNLFGGMVIVLDRPFSIGDWIQAGDVEGVVEEITFRSTRIRTFSMAIATVPNSKLANSNIINWTQRKLRRIHFKFTMDCKTPIESIKNSVNKIENMLKKHDKIDKNLIIVSFNELSTYGFGVFIYFYTDEFEYLKYEKLKEEINIKILEILREENVSLMFLNFDFKGFERRSGNCNLENTELESIKNITEEERGV
>LS483393.1|SQG37539.1|329323_329830_+|CarD-family-transcriptional-regulator
MFKINDYIMYGTVGVCQVIDITKETLMNNIEKEYYVLSPVYSKYPKKTVIKIPVDNKKISMRTLLSKEDVNSIINSIPETETLWIDNDRQRNDEFKTMLRSGNCDDLIVLIRSIYLDKKKRKLDGKKACKGDDEIMQTAEKLINEEFAVILDIRPEEVKSYIKSHIPQ
>LS483393.1|SQG37538.1|328489_329104_+|galactoside-O-acetyltransferase
MDLKEIRERMYGQKLYYCNDEDLMREQMKALELLYDFNKTRPSEQDKREKILKKMFAEIGDDCYIEPPFHANWGGKNVHFGNGVYANFNLTMVDDCDIFVGNNVMFGPNVTVSAGTHPIHPELRSKQAQYNIPIHIGNNVWIGANSVILPGVNIGDNSVIGAGSIVTKDIPSNVVAVGNPCRVLREINENDMKYYYRDMKIDIE
>LS483393.1|SQG37537.1|327088_328231_+|DNA-polymerase-III-subunit-epsilon
MAFKDDIQKLSVQVKERKEYITNEEMTKQALIIPFIQILGFDVFNPIEIRPEYSADFGIKKGEKVDYALFKENEPIIFIEAKSVNENLNNHDAQLARYFNSTKEVKLAILTNGIEYKFFTDLNANNVMDDTPFLNINLLEIKESDIESLNKLRKENFDKDSLITYAEELVYTSTLNESLRRLFSNPSDDFVRFIVKDFSEMRITSNVIERFRPLVKKAISNAVLDIVSKGLYQQETLTIKKEENINNDSVNREDLSEIEIGNKVQKGIITTENELKGFNIVKDILEKNNRDISEINYKDTTNYFSVYLRNTTRWIIRFNLDASKKNVMTKLPVEYAKNICPNKEIEQAPKGIGESRVYINSIDELYDLEKYLVDAYDNVN
>LS483393.1|SQG37536.1|326141_326873_-|NAD-dependent-deacetylase
MDDKINKLKEIIKNSNNIVFFGGAGVSTESGIPDFRSANGLFNEKLNITFTPEQLVSHSFFERYPEEFFNFYKAKLIYPNAKPNDAHIALAKLEEMGKLKAIVTQNIDGLHQMAGSKNVFELHGSVLRNYCVDCHTFYDEKFILESKGVPKCTKCGGIVKPDVVLYEEPLDDNVIRGAIDAISKADTLIIGGTSLVVYPAAGLINYFRGKNLVLINKSSTQADSKADLVINDSIGKVLGKVID
>LS483393.1|SQG37535.1|325690_326020_-|Predicted-integral-membrane-protein
MGIKQMFIQKILSYKKIFKINMLFLILCLAINIILFKNLPNKIALQIVESGELGNYIPKLFFIFFTPIVISLITFYNYMKTELRVSRSIVPVIVLFILNIIILITNLFA
>LS483393.1|SQG37545.1|334501_335179_-|uracil-DNA-glycosylase
MAAEFNNDWDDLLKDEFEKEYYLNLRKFLINEYKTQKIHPSMYDIFNALKFTPYKDVKVVILGQDPYHGPNQAHGFSFSVKPGVQTPPSLRNMFKELNSDLGCYIPNNGFLESWAKQGILLLNTVLTVREGQANSHKGKGWEIFTDRVIELLNKREEPIVFILWGRNAISKEALITNPIHKIIKSVHPSPLSATRGFFGSKPFSKTNDFLVSINKEPIDWQIPNI
>LS483393.1|SQG37546.1|335561_336290_+|beta-hexosamidase-A
MGVVFGAVEPKGKLPVDIPSLNNDGTMNTEVNYYDYGHGITNINSLGNVNISMNKKINLGDNFQVKFNLSDFNEIVAGKYRAKIKFQGEKLEFINSKVEFSEDLQTNIIDNNTLEVLINLEEGSLKANEVNFILEFKAIDKAELTSIEITSSELIDEKGRCFKQKYVISEFSIEDNKEDKPLSPDEDKEDEENNEDLENSDDNNKDELPQTGSGVGKEFIFGLGSLSLLVGIGLKSKRFKRK
>LS483393.1|SQG37547.1|342020_342488_-|bacterioferritin-comigratory-protein
MSIEINKLAPDFKLMGSDGKEHSLSDYKGKNIVLYFYPKDNTAGCTTEACDFRDNIQNFHDLNAIILGVSRDSLASHDKFITKLSLPFVLLSDPDEIVCKLYDVIKEKNMYGKKYMGVERSTFLINKEGILIEEFRKVRVKGHIEKVLDKLKEIN
>LS483393.1|SQG37548.1|343169_343916_+|peptidyl-prolyl-cis-trans-isomerase
MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIAFELMSEFAKETGLDKTEEFKDQLNKFAKELLAQMVMKKTLSSVTVTDDEAKAFYEEHKENFVELETVTAKHILVASEEEAKKVEEEIASGSITFEDAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKVEDKTEAKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREKYGVKLA
>LS483393.1|SQG37549.1|344379_345192_+|ABC-transporter
MKDWLEIEKSIFSHWRMIFSISKKEFKKEFAGSKLGMAWAIIRPLAMITVFWMIFSTGMRTTSSNVQVNYLVWLVSAYIPWIFISDVIMSGAGSIRVNSFLVKKVKFPVEILPTIRIVISFYTFLILLVISFIIFAVNGNLNLINIPKLIYAIIITIIFLAALSRLLSAWVVMSIDILHGISVFMQFLFWMCPVMWQAGELPVGSSMPWIEKILKLNPLYYLAVLFRDAYLGTHTVSLAYGVYFWVVTIILFIFGSKVFKKFRPEFDDVL
>LS483393.1|SQG37550.1|345209_346382_+|ABC-transporter
MSVAIRVKDLTKKYKLYQKRSERLANAFGKEKNIKEFYALKGVSFEISKGECVGIIGHNGAGKSTLLKLLTGVAFPTSGEIEINGRLASMLELGSGFNPELTGMENIYFNGSLNGLTKEEIDGKLKDILEFADIGNFIEQPVKNYSSGMFARLAFAVAINVDPDILIVDEILSVGDVGFQVKCMEKFNEFKKKGKTILYVSHGLGTVKKFCDRAIWLQKGEVVDDGNSVIVVERYYNLNFNPANIEQLKDHKSDIINSIAVKSNTKNVEYLEKLDLEVEYDLISNDLKDPNIVLEFRKTDYEPGTTRGNDQFVCGINSKDNIKNIPFNLGVNKLKVSLNKVNLVAGVYYIDFVLRDGEEEVYRKINGYSFTLNDKYRGEGFLILGHSWGN
>LS483393.1|SQG37551.1|346395_347679_+|glycoside-hydrolase-family-protein
MSVGRIARRTTEVLKEDGLIEVIKRVLRYIKRRIKDKLDNNALTYRKNYEEANAIFHKILKKEKFKAVVVFDSRVGWNIPLFQRSQHMANELTDDGYLYFYRTSEQFDPHVKTVEKLKDRLYLVNMANFALQNAMFDLLKEYKGHKFLSLYSTDVYLDEQYIKEKYIDNGFKIIYEYIDELSDEISGHLPDFVYDRHKNIIEDKSNIAVGSADKLIEEIEEIRGKENVAMITNGVQYDHWQYRSNEVPEKLKDIVSKGNPIIGYFGALAKWFDYELLKKVAKERPNYEIVLIGFLYDNSFKDSKIDELENVHYLGIVDYKELNQYSQYFTISTIPFLLNDITESTSPVKLFEYMAMGHPIVTTDMRECRKYKSVLIGKSHEDFIEKLDFALTLDKKDEYYNYLKEEALANTWREKAAILDRLIEKNI
>LS483393.1|SQG37552.1|347697_348933_+|glycoside-hydrolase-family-protein
MSLKRSLKNLLRPILKPMLLKYREKGHEDQKQVFFDEITGAIKNGNYDAIVIFDVYFGFEVKMFQRPQHIALNLAKENVLYFYKASPYVDKDIKTYKKMEENLYLVNTDLYWLQECLIDIVSQSGVPAFGQIYSTSFVEYDSWLKKFTDRNFKIIYEYVDDLSDDIAGFKISDEIKASHKRMLEDTEKVYVVTTADKLYQEAKELRGENKLALVTNGVQYEHFANIDCKKIPDKMKNIVNSKKKIIGYFGALASWFDYDLIKELAEEFKDDYEIVLIGIDYDQSLGKSGILKLDNVHYLGTVNYNELPTYSKFFNVSIIPFVVNEITEATSPVKLFEYMALGKPIVTTALPECRKYESPLVSDSHEDFINNIKKAAELENSKEYIELLRKEGNQNTWRQKAKDIKELILNS
>LS483393.1|SQG37553.1|348946_350128_+|ABC-transporter
MEKAIEVKNLCKNYRVYDSKSSRIRNIINPFAKKEVKEFKALTDVSFHVNKGEIVGIIGNNGAGKSTLLKILTGVSFPSSGEVNVNGRVSSLLELGTGFNPELTGEENIYFNGSLMGLTQDEIDKVKDNIIEFADIGEFINQPVKSYSSGMYARLAFAVAININPDILIVDEILSVGDVGFQKKCMDKFNEFKEAGKTVLYVSHGLETVQTFCERAIWLEKGRVVDIGPSFDIVEKYYDKLMKSDDKEELETGKFVELINVEILDDKKVYKKGESIEFLVEYEVFNPSVKNAGITIEMRKAYREPCEYRNADQFIFSVNSNVDEFTIPWKKGRNKITFKIDSLDVKEGIYYLDAIFSESQNLVALETQEDVVSFEVKNEGESEGFVFLDSTWT
>LS483393.1|SQG37554.1|350242_351676_+|glycoside-hydrolase-family-protein
MSNIFEVMLKKNIGDFTYEEKRELNNWLIENLKLKELIYSGLELTKVINEDGEETAYYENKITEEDILSGNFNELCSKTSKYIDDAISSILFEGQFNCFYEKIKSILELEDFDEIIVFHASFGWNIEMKQRPQHLAEALSKKKVLYIYRSDVKNDNIYSIKKIKDNLYVLNLDMYSLNMAFFEAIKSINKPKFLHVYATCLNSVDYEKIKTYMDKGFKVIYDFVDELSSEISGYNITSKVIEDHEKLLRDKENVLVVSTAKKLKDIANKFRGENENNILAPNAVNLEDFKNHGNEIGEKIQPIVNKRKPIIGYYGALAKWVDYKLIEELAKEREDYEIVLIGMDYDGSYNQSNLKDYSNISYLGMIDYRDLINYSRYFDVCIVPFIKNDITDSTSPLKIFEYMALEKPIVTTDINECKNYESCLISKDYDEFIKNIDKALKLEVDNKEYFNILRRESEENTWDNRAELIKEAIKNLE

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Crispr_ID: LS483393_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483393_2

1100041-1100243

Orphan

Consensus_repeat	Method
TTTTAAACAATATTTGCTTTTAGGT	CRISPRCasFinder

3 spacers

The CRISPR arrays of LS483393_2

>merge|LS483393|2|1100041-1100243|CRISPRCasFinder
TTTTAAACAAGCTTTATTTTTTAGGTGCACAAACCATCTTTTCTTTTGGCATTACAATAGATGATTTTAAACAATATTTGCTTTTAGGTCTATTTACGAGCAAATATTAAATAAAATCTAAACTAGATACTTTTAAACAATATTTGTTTTTAGGTGCTAACAGCTTTTTAGTAGTTACTATTAATAGAATATTGATTTTAGGT

>LS483393|2|2|1100041-1100243|CRISPRCasFinder
TTTTAAACAAGCTTTATTTTTTAGG	TGCACAAACCATCTTTTCTTTTGGCATTACAATAGATGA
TTTTAAACAATATTTGCTTTTAGGT	CTATTTACGAGCAAATATTAAATAAAATCTAAACTAGATAC
TTTTAAACAATATTTGTTTTTAGGT	GCTAACAGCTTTTTAGTAGTTAC
TATTAATAGAATATTGATTTTAGGT

Protein	Signature genes	Signature genes Name	Protein_function
LS483393.1\|SQG38226.1\|1107836_1108295_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein-NrdG	unknown	unknown	gnl\|CDD\|379137
LS483393.1\|SQG38219.1\|1103632_1104253_+\|NADPH-dependent-FMN-reductase	unknown	unknown	gnl\|CDD\|223728
LS483393.1\|SQG38220.1\|1104695_1105121_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|341244
LS483393.1\|SQG38215.1\|1100448_1100994_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|366181
LS483393.1\|SQG38228.1\|1109416_1109635_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG38208.1\|1095814_1096573_+\|ethanolamine-utilization-protein	unknown	unknown	gnl\|CDD\|274184
LS483393.1\|SQG38214.1\|1099539_1100016_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
LS483393.1\|SQG38201.1\|1091984_1093463_+\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|131570
LS483393.1\|SQG38209.1\|1096719_1096992_+\|ethanolamine-utilization-protein	unknown	unknown	gnl\|CDD\|377017
LS483393.1\|SQG38211.1\|1097598_1098696_+\|ethanolamine-utilization-protein	unknown	unknown	gnl\|CDD\|237906
LS483393.1\|SQG38227.1\|1108489_1109212_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG38224.1\|1106079_1107840_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|236212
LS483393.1\|SQG38222.1\|1105300_1105789_+\|Protein-of-uncharacterised-function-(DUF2691)	unknown	unknown	unknown
LS483393.1\|SQG38216.1\|1101285_1101597_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG38202.1\|1093817_1094108_+\|propanediol-utilization-protein	unknown	unknown	gnl\|CDD\|132899
LS483393.1\|SQG38213.1\|1098698_1099172_+\|ethanolamine-utilization-protein	unknown	unknown	gnl\|CDD\|114941
LS483393.1\|SQG38205.1\|1094146_1094962_+\|ethanolamine-utilization-cobalamin-adenosyltransferase	unknown	unknown	gnl\|CDD\|227149
LS483393.1\|SQG38217.1\|1101910_1103551_+\|diguanylate-phosphodiesterase	unknown	unknown	gnl\|CDD\|225110
LS483393.1\|SQG38206.1\|1094971_1095607_+\|propanediol-utilization-protein	unknown	unknown	gnl\|CDD\|237899
LS483393.1\|SQG38210.1\|1096993_1097548_+\|propanediol-utilization-protein	unknown	unknown	gnl\|CDD\|131578

Protein	Function_ID	Function_description	E-value
LS483393.1\|SQG38226.1\|1107836_1108295_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein-NrdG	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	1.27861e-09
LS483393.1\|SQG38219.1\|1103632_1104253_+\|NADPH-dependent-FMN-reductase	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	2.20304e-50
LS483393.1\|SQG38220.1\|1104695_1105121_+\|Uncharacterised-protein	gnl\|CDD\|341244	cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase. 2,3-dihydroxybenzoate-AMP ligase activates 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate. However, it can also catalyze the ATP-PPi exchange for 2,3-DHB analogs, such as salicyclic acid (o-hydrobenzoate), as well as 2,4-DHB and 2,5-DHB, but with less efficiency. Proteins in this family are the stand-alone adenylation components of non-ribosomal peptide synthases (NRPSs) involved in the biosynthesis of siderophores, which are low molecular weight iron-chelating compounds synthesized by many bacteria to aid in the acquisition of this vital trace elements. In Escherichia coli, the 2,3-dihydroxybenzoate-AMP ligase is called EntE, the adenylation component of the enterobactin NRPS system.	0.000402453
LS483393.1\|SQG38215.1\|1100448_1100994_+\|acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.82566e-09
LS483393.1\|SQG38208.1\|1095814_1096573_+\|ethanolamine-utilization-protein	gnl\|CDD\|274184	TIGR02536, putative_ethanolamine_utilization_protein, ethanolamine utilization protein. This family of proteins is found in operons for the polyhedral organelle-based degradation of ethanolamine. This family is not found in proteobacterial species which otherwise have the same suite of genes in the eut operon. Proteobacteria have two genes that are not found in non-proteobacteria which may complement this genes function, a phosphotransacetylase (pfam01515) and the EutJ protein (TIGR02529) of unknown function.	2.7194e-73
LS483393.1\|SQG38214.1\|1099539_1100016_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	8.48351e-99
LS483393.1\|SQG38201.1\|1091984_1093463_+\|alcohol-dehydrogenase	gnl\|CDD\|131570	TIGR02518, Acetaldehyde_dehydrogenase_acetylating, acetaldehyde dehydrogenase (acetylating).	0
LS483393.1\|SQG38209.1\|1096719_1096992_+\|ethanolamine-utilization-protein	gnl\|CDD\|377017	pfam03319, EutN_CcmL, Ethanolamine utilisation protein EutN/carboxysome. The crystal structure of EutN contains a central five-stranded beta-barrel, with an alpha-helix at the open end of this barrel (Structure 2HD3). The structure also contains three additional beta-strands, which help the formation of a tight hexamer, with a hole in the center. this suggests that EutN forms a pore, with an opening of 26 Angstrom in diameter on one face and 14 Angstrom on the other face. EutN is involved in the cobalamin-dependent degradation of ethanolamine.	3.53782e-37
LS483393.1\|SQG38211.1\|1097598_1098696_+\|ethanolamine-utilization-protein	gnl\|CDD\|237906	PRK15086, PRK15086, ethanolamine utilization protein EutH; Provisional.	9.09039e-166
LS483393.1\|SQG38224.1\|1106079_1107840_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|236212	PRK08270, PRK08270, ribonucleoside triphosphate reductase.	0
LS483393.1\|SQG38202.1\|1093817_1094108_+\|propanediol-utilization-protein	gnl\|CDD\|132899	cd07059, BMC_PduA, 1,2-propanediol utilization protein A (PduA), Bacterial Micro-Compartment (BMC) domain. PduA is encoded within the 1,2-propanediol utilization (pdu) operon along with other homologous carboxysome shell proteins PduB, B', J, K, T, and U. PduA is thought to be required for the formation of the outer shell of bacterial pdu polyhedral organelles which are involved in coenzyme B12-dependent degradation of 1,2-propanediol. Although it has been suggested that PduA might form hexamers and further assemble into the flat facets of the polyhedral outer shell of pdu organelles, like PduU does, at present no experimental evidence directly supports this view.	4.19683e-40
LS483393.1\|SQG38213.1\|1098698_1099172_+\|ethanolamine-utilization-protein	gnl\|CDD\|114941	pfam06249, EutQ, Ethanolamine utilisation protein EutQ. The eut operon of Salmonella typhimurium encodes proteins involved in the cobalamin-dependent degradation of ethanolamine. The role of EutQ in this process is unclear.	1.30397e-93
LS483393.1\|SQG38205.1\|1094146_1094962_+\|ethanolamine-utilization-cobalamin-adenosyltransferase	gnl\|CDD\|227149	COG4812, EutT, Ethanolamine utilization cobalamin adenosyltransferase [Amino acid transport and metabolism].	1.62926e-70
LS483393.1\|SQG38217.1\|1101910_1103551_+\|diguanylate-phosphodiesterase	gnl\|CDD\|225110	COG2200, Rtn, c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms].	9.13795e-56
LS483393.1\|SQG38206.1\|1094971_1095607_+\|propanediol-utilization-protein	gnl\|CDD\|237899	PRK15070, PRK15070, phosphate propanoyltransferase.	4.63671e-116
LS483393.1\|SQG38210.1\|1096993_1097548_+\|propanediol-utilization-protein	gnl\|CDD\|131578	TIGR02526, putative_ethanolamine_utilization_protein, PduT-like ethanolamine utilization protein. This gene shows up in ethanolamine utilization operons in which a proteinaceous coat organelle is also encoded. It is closely related to the PduT protein in propane-diol operons with the same structure.	1.43157e-91

>LS483393.1|SQG38214.1|1099539_1100016_+|glutathione-peroxidase
MEIYDISVKDINGENVSLERYRGKVLLIVNTASKCGFTKQFDGLEELYEKYKDEGFEVLGFPCNQFKEQDPGSNSEIMNFCKLNFGVTFPMFEKIDVNGENESLLYSYLKEQKSGMFGSKIKWNFTKFLVDREGNVIKRFSPQTTPKSIEKDIEELLA
>LS483393.1|SQG38213.1|1098698_1099172_+|ethanolamine-utilization-protein
MENISKELLEKLVRQIIEEKLAGAGNNDSVDFIRNKDKSGIMSIKLPTVKVDESNRLDTGNPRDVVYTKDLFTLEESPRLGAGIMEMKETTFDWTLNYDEIDYVIEGHLDIIIDGRKISADAGEIILIPKGSKIQFSVPDYARFIYVTYPADWASQA
>LS483393.1|SQG38211.1|1097598_1098696_+|ethanolamine-utilization-protein
MSINEIIVYIMVACMALGAIDKCLGNKFGIGEQFEEGIMAMGSLALAMVGVICLAPVLASVLGPIVTPVFNALGADPAMFAGSILANDMGGAPLAASLAQDPQAGMFSGLIIGAMMGATIVFTIPVSLGIIEKKDHKFLATGILAGIITIPVGAFVGGLVAGFPAMMVLKNLVPIIIFAILIAIGLAFAEEAMIKGFNIFGKIVVIIITLALAAAIIEALTGIVIIPGMNPISEGIEIVGDIAIVLAGAFPLVYIITKVFKKPLMGLGKILGINEIAAAGMIASLANNIPMFGMLKDMDDRGKIINVAFAVSASFVLGDHLGFTAGFNPEMIFPMIVAKLVGGITAVILAMFIAKKTLGKIEEAK
>LS483393.1|SQG38210.1|1096993_1097548_+|propanediol-utilization-protein
MKKSIGALEFRSISKGIEVSNEVVKKAFVEVSYLKSICPGKFFLIVNGDAGEVKEAIEFGEKLGEKYLVGSFIINSIHHDIINALKGKYSQKNIEDKAIGIMETGKVSSGILALDKTLKSSEVNLVKLQLAFGIGGKLVYIVSGDLSSVENGMREGQAILQEKDIINVSIIPFVHSEIAKNLIK
>LS483393.1|SQG38209.1|1096719_1096992_+|ethanolamine-utilization-protein
MEIGRVVGNVWATRKDEKLNGQKFLIVKLLISKDKEKEGLFVAADNAGAGIGDIVLITKGGAARQSIGNREVPIDAAIVGIVDSIDIEED
>LS483393.1|SQG38208.1|1095814_1096573_+|ethanolamine-utilization-protein
MKGGKDNMDYEKLVEFLVDEIYKRIQEENSKSNSLEKRKSIVVIGESNVSFYREALKGFDINPLTSECKDCDILLISKLCIKGLSNIAQGTCTTKAENFALEMLLKGKKVYILEDGIEYRKYKNTAPKVLYNKYIKFEEELLAYGIEVIDDLNRISIESKDEKVSFSGIKEEISKNLCLCSENKVEGKKDLDTTAIADEFTINLSNKKLVSESDLRKPHINGVRTLIVDKKAIITPLAKDYIRINNLNVVLS
>LS483393.1|SQG38206.1|1094971_1095607_+|propanediol-utilization-protein
MDNLLQDIIEEVVRRVKDEAFIEVEASGRHVHLTREHIEILFGEGHELTRIKDLSQPGQYACKERVTISGPRGKIDNVVVLGPPRNETQVEVSFTDALVLGSIPPVKLSGDLENTPEITISTERASIALNRGLMVAKRHIHMTPEDAIKFGVSNNESVKVKVLGKRPLIFDDVIVRVSKDYRTFMHIDYDEANACGFSKGTFALIVGKDEK
>LS483393.1|SQG38205.1|1094146_1094962_+|ethanolamine-utilization-cobalamin-adenosyltransferase
MHSFYTSNRGCDKMAVLTEGEVRKRLSREDLKALKEFKVVKGEIITPSAKSYLAEHNINLVYVNSEEEKLNKETEPKEIIREVVREKEYKYETVFGAKLDEKPEHMTHLTGNLLVFKDHKRIIFRGKIDSLEARIVETQVLCHKQGMNKLVEDLQEILNLIGRILRCEVLSEPLEGFSLQGMTEKDLREKSHNPKKYFGIGHEMPTYEMGEIVAALNILRTLTRETELSAYEAFKGEYGQVEREDLIRALNRLSSVFWIMIFKVRTGKYEK
>LS483393.1|SQG38202.1|1093817_1094108_+|propanediol-utilization-protein
MANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGDLISVHVIPRPHFEVDAILPKAPKAE
>LS483393.1|SQG38201.1|1091984_1093463_+|alcohol-dehydrogenase
MEFLDKDLVSIQETRGLIRKAKEAQSKLARMSQQDIDRIVKAISDAAYENSEKLAKMANEETGFGKWEDKVLKNVFAARTVYESIKDTKTVGIVEENVEKRAFKIMVPVGVVAGLIPSTNPTSTAIYKAMISIKARNAIVLSPHPSAKKCIIETAKIIAKAAERAGCPEGAIGCITVPSIEGTNELMKNKDTSLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSADVKLAVKRILDSKTFDNGTICASEQSIVVEKAMEDEVVRELKEQGAYFLTEEQANQLSKFVMRANGTMNPQIVGKTPQDIAKLAGLEGIPSWARVLVPRECHVGHKYPFSREKLTTILTFFVEENVDAVLNRCREILLNEGAGHTFCMHANNEELVKRFALEMPVSRMVVNSPGALGGIGATINLVPALTLGCGAVGGSSTSHNIGPLDLMNTRNVAYGVRELEDIRELAVGATKEVASSLDLGDKEELINLLVKKIIEELK
>LS483393.1|SQG38215.1|1100448_1100994_+|acetyltransferase
MNLKRINSNDNCFNKAMEIYNGSFPIFERRTMDDQIKALDDINYHFEVIYDKEEIVGILLYWDMGRYKYIEHFAIDSKLRGKNYGSRVLKEFCDHNKNVILEIDPPIDEISIKRLNFYLKLGFKLQDFDYTHPSYRKGCKRHSLKIMTFNHNMPKEDYDTFNILLKRDVMKYSEFKDRLNN
>LS483393.1|SQG38216.1|1101285_1101597_+|Uncharacterised-protein
MKKVLIGVLVFLICIISVFLFFDREEESIVTDVVEKSQYGLLVNYEDGLIAVDTEDAEIIDRDGKENTLDCINEGDRIEIIYDGKIEETYPAQINNVYKIIIF
>LS483393.1|SQG38217.1|1101910_1103551_+|diguanylate-phosphodiesterase
MKKRVFWVSIVFLIIITVLGITIKFDGKKVNCNRKTVKVGFYEYYPYYYLNKNSMPDGYYNEILELICNKLDLNYKYVDCNVTDALEKLKSGQIDLVFGISKTPDREKEYEFTDHYLNNDNFAIYTNKNIKNGDLKALNGLKMGFLKGEENNEWILRLLKDKGINVKPIDVSNYPEDEEYLHDNKVDFVVENTRSNINYENKNIKKIFEFSSGPVYITSRKGNEKLIEGIDSVLGELEEDGEQKDTNLYSKYFDEHLDKLKNEKLLVVIFLIIISLFIYKKRKNKIFAIRTKRKIRDYMKNDKYILYYQPIVDPKTNGVKGFESLLRLNKDGKILTPYSFIREIEDNNMSLEVSLWLLKKVILDYRIIKDYDMVKGRDFYISLNVSFKEIENPKFLRSLMKIAKDYKIDDCNICLEIVEKFGMEDIGRIQSAIRIIKEYGFLIAIDDFGVEYSNLDLLNKIDSDIVKLDKYFADNLDKSIINEKTVEFISEICIIANRTIVFEGIEEQYQVDIVKAFPYEKIYIQGYFYSKPVDIETLKDFKFKDS
>LS483393.1|SQG38219.1|1103632_1104253_+|NADPH-dependent-FMN-reductase
MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECFMKDGVNEFVEKAKDVDGFVFGSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSARRAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPDEVKKDLEGMQTMRVLGRNMAWLIKCIELGKNNNILKPELEERERTNFIR
>LS483393.1|SQG38220.1|1104695_1105121_+|Uncharacterised-protein
MESKEMRLAKKAKKLIDEFERVQSVLLNGELSDQEVEIRDDGATIVLKNIMPGYSGEAMFKLTHISDVVKAYIDHMDEENDEMIKSYEVENTNWHESDLGDIYRESAMEHLEKVEVVGDKVRHTYKELKKIEEKAREIEGL
>LS483393.1|SQG38222.1|1105300_1105789_+|Protein-of-uncharacterised-function-(DUF2691)
MRGIVLDKGQEYYTNLRKVFNAFNNIHLEYNWLITDCCAYPENEDIGELLSREYCFISGEELDTIIKKEDFQLIWGVLSGFNKKFTLEEIMKYTLPYAEDNKDIWENPVCIQHPLSEIEIISWDSDKTVLISKDENLLICFKSNFPLSEDLEFYNRKLKNRL
>LS483393.1|SQG38224.1|1106079_1107840_+|anaerobic-ribonucleoside-triphosphate-reductase
MLSSKKIVDDYIKKIDWRVNENSNSPYSFGSLNKHIIAEVSKDYWLNEVYKDKRIIDAYKNGDMHIHDLGGLTLYCCGYSLRNIILMGVQGIPNIPTSSPAKHFDAILNQIANLVTIYQNEIMGAVAFNSFDTLLAPYIKKDNLTYEEVKQNLQNFIFSINSNSRAGAEPAFTNITFDLFPPKDLENDPALIGDKIQEFTYKECQKEMDMLNKAFYELMNEGDYNGRPFSYPIPTYNINSNFDFDNPNNDMLFEMTGKFGYPYFANFVNSDMDQSDVRSMCCRLNLDLRELRKRNGGLFGSGDSTGSIGVVTINLPRLAYKHKNNEKEFFNALKEILIIAKDSLEKKRKWLNDNIINKDMLPAFSTYVGTLKNHFSTIGIVGLNEMCENFNGNNILTEEGMEFSIKVCNFIREELINFQEETGNLYNFEATPAESTCYRLAKKDVEDFEDIIVRGGREYPYYTNSCHMPPNEVKNLKQLFDHQDKLQVLFTGGTVVHIYCDGAISGEKAKHIVKTVCKKYRTPYVSISPLNRYCEEHGYVKERVEECPICGKKLDLYQRITGYLRKVEFFNDGKKSEFKDRNQLSL
>LS483393.1|SQG38226.1|1107836_1108295_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein-NrdG
MIIKTKGIVHERVEDAPFMGALISAVDCNLNCKGCFNQHLKDLPNIEMDSEDILDKVTNDPFNEGIILAGLEWSLQPKELREMVNSARKRKLKVIVYSGLSEEDFKKKFPDIYGLKGDMYFKFGKYDEKLKVNNNIQYDVKLATSNQKILKK
>LS483393.1|SQG38227.1|1108489_1109212_+|Uncharacterised-protein
MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQIINDSPGLKLIERYKGNYLEKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDILNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY
>LS483393.1|SQG38228.1|1109416_1109635_-|Uncharacterised-protein
MKDENINIKYQNKVNLIFIILVTISFLLYRFVFDRNGNLLSLNYILIYFVVLVLVISSLINFIKGKTRNKDN

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Crispr_ID: LS483393_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483393_3

1705196-1706285

TypeII

Consensus_repeat	Method
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CRISPRCasFinder
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CRT
AACACTGTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	PILER-CR
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	PILER-CR
CAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAA	PILER-CR

16 spacers

cas3,cas2,cas1,cas9

The CRISPR arrays of LS483393_3

>merge|LS483393|3|1705196-1706285|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR
TAACATATCATAAGTAAATTCTCGATATGCTATAATTATACTGTAAATGGTGGTAAGTTTACATTGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGGAGATAAATATCAAAGATTACTAAAGACTGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATTACCATTAGAAGCAGCTAATAAAGTACCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGATAGCAGATTGACTGAAATTGCTTATAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATTTAGAGCAATCATTGTTTTACCTTCGATAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATATATTCATTGAGATCATCATAAGAGATTCTGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAAATTGTAGTAAAGAAAATTATAAAAAGTAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATCACTAAAGATCTATTAGAGTTAGTGGAATTGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGTGATATCCCATTCTAGGAAAGGTTTTAAAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATCCAAGTAATATAAGATATGACAGATTCTTAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAGAAATAGAGTTGGTAAGGAGTTTAAAGATGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGAGCTAGATATTACTGGTACTGGTGTTTGGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATCCTAAAGTTGGTAAGTATGTTAGATTGCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATATGAGTAATATTAAAGTTGATTTAGACAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATTAGAAGAGCAAATATATTAGAAATTCCAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAATGGTACAGAACTAGATAAGCCTATAGAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAG

>LS483393|3|3|1705196-1706283|CRISPRCasFinder
TAACATATCATAAGTAAATTCTCGATATGCTATAAT	TATACTGTAAATGGTGGTAAGTTTACATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GGAGATAAATATCAAAGATTACTAAAGACT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TACCATTAGAAGCAGCTAATAAAGTACCA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GATAGCAGATTGACTGAAATTGCTTATAAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TTAGAGCAATCATTGTTTTACCTTCGATA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATATTCATTGAGATCATCATAAGAGATTCT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AAATTGTAGTAAAGAAAATTATAAAAAGTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CACTAAAGATCTATTAGAGTTAGTGGAATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GTGATATCCCATTCTAGGAAAGGTTTTAAA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCAAGTAATATAAGATATGACAGATTCTTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AGAAATAGAGTTGGTAAGGAGTTTAAAGAT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GAGCTAGATATTACTGGTACTGGTGTTTGG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCTAAAGTTGGTAAGTATGTTAGATTGCA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATGAGTAATATTAAAGTTGATTTAGACAAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TAGAAGAGCAAATATATTAGAAATTCCAAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AATGGTACAGAACTAGATAAGCCTATAGAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT

>LS483393|3|1|1705196-1706283|CRT
TAACATATCATAAGTAAATTCTCGATATGCTATAAT	TATACTGTAAATGGTGGTAAGTTTACATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GGAGATAAATATCAAAGATTACTAAAGACT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TACCATTAGAAGCAGCTAATAAAGTACCA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GATAGCAGATTGACTGAAATTGCTTATAAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TTAGAGCAATCATTGTTTTACCTTCGATA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATATTCATTGAGATCATCATAAGAGATTCT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AAATTGTAGTAAAGAAAATTATAAAAAGTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CACTAAAGATCTATTAGAGTTAGTGGAATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GTGATATCCCATTCTAGGAAAGGTTTTAAA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCAAGTAATATAAGATATGACAGATTCTTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AGAAATAGAGTTGGTAAGGAGTTTAAAGAT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GAGCTAGATATTACTGGTACTGGTGTTTGG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCTAAAGTTGGTAAGTATGTTAGATTGCA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATGAGTAATATTAAAGTTGATTTAGACAAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TAGAAGAGCAAATATATTAGAAATTCCAAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AATGGTACAGAACTAGATAAGCCTATAGAG
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT

>LS483393|3|1|1705208-1705362|PILER-CR
AGTAAATTCTCGATATGCTATAATTATACTGTAAATGGTGGTAAGTTT	ACATTGTTATAGTTCCT
AGTAAATTCTCGATATGCTATAATGGAGATAAATATCAAAGATTACTA	AAGACTGTTATAGTTCCTAGTAAA
TTCTCGATATGCTATAATTACCATTAGAAGCAGCTAATAAAGTACCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGATAGCAGATTGACTGAAATTGCTTATAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TTAGAGCAATCATTGTTTTACCTTCGATA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATATTCATTGAGATCATCATAAGAGATTCT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AAATTGTAGTAAAGAAAATTATAAAAAGTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CACTAAAGATCTATTAGAGTTAGTGGAATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GTGATATCCCATTCTAGGAAAGGTTTTAAA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCAAGTAATATAAGATATGACAGATTCTTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AGAAATAGAGTTGGTAAGGAGTTTAAAGAT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGAGCTAGATATTACTGGTACTGGTGTTTGGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATCCTAAAGTTGGTAAGTATGTTAGATTGCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATATGAGTAATATTAAAGTTGATTTAGACAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATTA	GAAGAGCAAATATATTAGAAATTC
CAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAA	TGGTACAGAACTAGATAAGCCTAT


>LS483393|3|2|1705458-1705954|PILER-CR
	ACATTGTTATAGTTCCT
AGTAAATTCTCGATATGCTATAATGGAGATAAATATCAAAGATTACTA	AAGACTGTTATAGTTCCTAGTAAA
TTCTCGATATGCTATAATTACCATTAGAAGCAGCTAATAAAGTACCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGATAGCAGATTGACTGAAATTGCTTATAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TTAGAGCAATCATTGTTTTACCTTCGATA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATATTCATTGAGATCATCATAAGAGATTCT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AAATTGTAGTAAAGAAAATTATAAAAAGTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CACTAAAGATCTATTAGAGTTAGTGGAATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GTGATATCCCATTCTAGGAAAGGTTTTAAA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCAAGTAATATAAGATATGACAGATTCTTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AGAAATAGAGTTGGTAAGGAGTTTAAAGAT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGAGCTAGATATTACTGGTACTGGTGTTTGGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATCCTAAAGTTGGTAAGTATGTTAGATTGCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATATGAGTAATATTAAAGTTGATTTAGACAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATTA	GAAGAGCAAATATATTAGAAATTC
CAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAA	TGGTACAGAACTAGATAAGCCTAT


>LS483393|3|3|1706112-1706285|PILER-CR
	ACATTGTTATAGTTCCT
AGTAAATTCTCGATATGCTATAATGGAGATAAATATCAAAGATTACTA	AAGACTGTTATAGTTCCTAGTAAA
TTCTCGATATGCTATAATTACCATTAGAAGCAGCTAATAAAGTACCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGATAGCAGATTGACTGAAATTGCTTATAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	TTAGAGCAATCATTGTTTTACCTTCGATA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	ATATTCATTGAGATCATCATAAGAGATTCT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AAATTGTAGTAAAGAAAATTATAAAAAGTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CACTAAAGATCTATTAGAGTTAGTGGAATT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	GTGATATCCCATTCTAGGAAAGGTTTTAAA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	CCAAGTAATATAAGATATGACAGATTCTTA
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT	AGAAATAGAGTTGGTAAGGAGTTTAAAGAT
GTTATAGTTCCTAGTAAATTCTCGATATGCTATAATGAGCTAGATATTACTGGTACTGGTGTTTGGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATCCTAAAGTTGGTAAGTATGTTAGATTGCAGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATATGAGTAATATTAAAGTTGATTTAGACAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATTA	GAAGAGCAAATATATTAGAAATTC
CAAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAA	TGGTACAGAACTAGATAAGCCTAT
AGAGGTTATAGTTCCTAGTAAATTCTCGATATGCTATAATAG

Protein	Signature genes	Signature genes Name	Protein_function
LS483393.1\|SQG39143.1\|1689086_1691954_+\|putative-enterotoxin	unknown	unknown	gnl\|CDD\|377965
LS483393.1\|SQG39168.1\|1714639_1714948_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG39146.1\|1693674_1694205_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG39169.1\|1714973_1718639_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|380283
LS483393.1\|SQG39167.1\|1711026_1714629_-\|Eco57I-restriction-endonuclease	unknown	unknown	gnl\|CDD\|380294
LS483393.1\|SQG39151.1\|1698365_1699241_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG39160.1\|1706333_1706642_-\|CRISPR-associated-protein-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LS483393.1\|SQG39175.1\|1720234_1720912_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG39141.1\|1687027_1688479_-\|lipoprotein	unknown	unknown	gnl\|CDD\|378792
LS483393.1\|SQG39153.1\|1699245_1700202_-\|Domain-of-uncharacterised-function-(DUF1848)	unknown	unknown	gnl\|CDD\|378091
LS483393.1\|SQG39158.1\|1702564_1705117_-\|PglZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|274259
LS483393.1\|SQG39171.1\|1718703_1719285_-\|Domain-of-uncharacterised-function-(DUF1788)	unknown	unknown	gnl\|CDD\|378040
LS483393.1\|SQG39177.1\|1721209_1721980_-\|Predicted-membrane-protein	unknown	unknown	gnl\|CDD\|377866
LS483393.1\|SQG39148.1\|1694223_1698363_-\|helicase-family-protein-with-metal-binding-cysteine-cluster	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|350681
LS483393.1\|SQG39145.1\|1692364_1693660_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG39165.1\|1707549_1710747_-\|CRISPR-associated-protein,-Csn1-family	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LS483393.1\|SQG39163.1\|1706649_1707549_-\|CRISPR-associated-protein-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
LS483393.1\|SQG39156.1\|1700426_1702457_-\|ATP-dependent-Lon-type-protease	unknown	unknown	gnl\|CDD\|131701
LS483393.1\|SQG39173.1\|1719462_1720056_-\|Putative-inner-membrane-protein-(DUF1819)	unknown	unknown	gnl\|CDD\|378066
LS483393.1\|SQG39138.1\|1685748_1686915_-\|NADPH-dependent-butanol-dehydrogenase	unknown	unknown	gnl\|CDD\|341458

Protein	Function_ID	Function_description	E-value
LS483393.1\|SQG39167.1\|1711026_1714629_-\|Eco57I-restriction-endonuclease	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	0
LS483393.1\|SQG39165.1\|1707549_1710747_-\|CRISPR-associated-protein,-Csn1-family	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LS483393.1\|SQG39143.1\|1689086_1691954_+\|putative-enterotoxin	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	2.88496e-06
LS483393.1\|SQG39169.1\|1714973_1718639_-\|Uncharacterised-protein	gnl\|CDD\|380283	NF033441, BREX_BrxC, BREX system P-loop protein BrxC. BrxC is a P-loop-containing protein, and probable ATPase, from BREX (bacteriophage exclusion) systems of type 1.	0
LS483393.1\|SQG39141.1\|1687027_1688479_-\|lipoprotein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	3.46715e-52
LS483393.1\|SQG39160.1\|1706333_1706642_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.96785e-40
LS483393.1\|SQG39153.1\|1699245_1700202_-\|Domain-of-uncharacterised-function-(DUF1848)	gnl\|CDD\|378091	pfam08902, DUF1848, Domain of unknown function (DUF1848). This family of proteins are functionally uncharacterized. The C-terminus contains a cluster of cysteines that are similar to the iron-sulfur cluster found at the N-terminus of pfam04055.	1.04548e-153
LS483393.1\|SQG39158.1\|1702564_1705117_-\|PglZ-domain-containing-protein	gnl\|CDD\|274259	TIGR02687, conserved_hypothetical_protein, TIGR02687 family protein. Members of this family are uncharacterized proteins sporadically distributed in bacteria and archaea, about 880 amino acids in length. This protein is repeatedly found upstream of another uncharacterized protein of about 470 amino acids in length, modeled by TIGR02688.	0
LS483393.1\|SQG39171.1\|1718703_1719285_-\|Domain-of-uncharacterised-function-(DUF1788)	gnl\|CDD\|378040	pfam08747, DUF1788, Domain of unknown function (DUF1788). Putative uncharacterized domain in proteins of length around 200 amino acids.	2.5207e-51
LS483393.1\|SQG39177.1\|1721209_1721980_-\|Predicted-membrane-protein	gnl\|CDD\|377866	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	1.0497e-24
LS483393.1\|SQG39148.1\|1694223_1698363_-\|helicase-family-protein-with-metal-binding-cysteine-cluster	gnl\|CDD\|350681	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins. Yeast Hrq1, similar to RecQ4, plays a role in DNA inter-strand crosslink (ICL) repair and in telomere maintenance. Hrq1 lacks the Sld2-like domain found in RecQ4. Hrq1 belongs to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.08588e-52
LS483393.1\|SQG39163.1\|1706649_1707549_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.56293e-104
LS483393.1\|SQG39156.1\|1700426_1702457_-\|ATP-dependent-Lon-type-protease	gnl\|CDD\|131701	TIGR02653, putative_ATP-dependent_Lon_protease, conserved hypothetical protein. This model describes a protein family of unknown function, about 690 residues in length, in which some members show C-terminal sequence similarity to pfam05362, which is the Lon protease C-terminal proteolytic domain, from MEROPS family S16. However, the annotated catalytic sites of E. coli Lon protease are not conserved in members of this family. Members have a motif GP[RK][GS]TGKS, similar to the ATP-binding P-loop motif GxxGxGK[ST]. [Hypothetical proteins, Conserved].	0
LS483393.1\|SQG39173.1\|1719462_1720056_-\|Putative-inner-membrane-protein-(DUF1819)	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	5.97839e-61
LS483393.1\|SQG39138.1\|1685748_1686915_-\|NADPH-dependent-butanol-dehydrogenase	gnl\|CDD\|341458	cd08179, NADPH_BDH, NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzyme requires NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.	0

>LS483393.1|SQG39158.1|1702564_1705117_-|PglZ-domain-containing-protein
MNLKEIKNFLNDIFSKPLGDGKVRHIVFWYDENEDFTEEIDEFDLDGVELIKLNENNAFYTKYYIEKENVDGNILVYSNMKKPKPQEDWLYDILSYSEEFSTDRATVIMRELKVNNPYLKEAFTFYNTFFKNKDRLAAFRNLGIQDYTEEKVHIGVLAVLTKTKIMNFEEITRALIKEKLEGNSKLYEDIDKFGSLDILWNLISKNYGYSFEERSLEKFMAVLLITNMNETIKFNLPKQYEDFVSKKSTDCIVFINHFMNSLKDSHYYDKMQRLIGEKIKISKLLEKTDSDKFLKCDVFEEMDKLILGRIINLLNDGIEEYDKYLNLMASRRTLHYYKKYESEYRALKWAIRLLSKKKELNSIIKTESSYEMVKSYARNYFEIDKAYRKFYYHFDNCELKEILNNLKDTVENLYNNWYLQELSIKWNEALAKQKTWRIEGVNQQERFYNDNIKYGRKERVFVIISDALRYESAEELSTRLRNERKAKVELDYMQGVLPSYTKLGMAALLPNKKIEINSNYDVLVDGINSNGTENRDKILKVENDKSLAITYNKLMDLKEAEFRKVFSGLEVVYIYHNTIDAIGDHASTEREVFSATDTALNELINLVNKLVHRVSASSIIITSDHGYLYKRSHIEEYDKISGVKLQDGDDNRRFLLTYKDKDIEGTMKFSMDYLLGEDSGMNVVTPKGIARFKVQGAGANYVHGGAMLQEILVPIIKFKNDRSSSSENDIRKVKISLTSITRKITNIITYLEFFQDEKIQDKVITQRIKCYFEDEEGNRISNENTIIGDSKSENPIERSYREKFVLKSIPYDKRKQYYLVIEDEDDSSLQCEKIPFNIDIAIVDDFGFSE
>LS483393.1|SQG39156.1|1700426_1702457_-|ATP-dependent-Lon-type-protease
MDELSIKLNQSFAGKVVRKDLTQKLKQGANVPTYVLEYLLGMYCATDDEESINEGVERVKNILADNFVRPDEAEKIKSKIREMTRYTVIDKLTVKLNEKRDIYVAEFSNLGLKDIEISSKYVKDFDKLLGGGIWCIVKLEYYYDENEKLSTPFIIESVTPIQMPNMDIDELIKGRRDFSKEEWIDILIRSIGMEPTQLEEHVKWHILLRMVPLCENNYNMCELGPRGTGKSHLYKEISPNSILISGGQTTVANLFYNMARRKIGLVGMWDTVAFDEVAGITFKDKDGIQIMKDYMASGSFARGKEEKAASASMVFVGNINQSVDVLLKTSHLFEPFPEVMAYDSAFFDRMHFYLPGWEIPKMRPELLTNSFGFITDYLAEYLREMRKRTFGDSIDKYFRLGNNLNQRDVIAVRKTVSGLIKIIYPHGEFEKEDLEEILRYALVGRRRVKEQLKKIGGMEFYDVHFSYIDNETMREEFISVPEQGSGSLIPEGLGRAGHVYTIGLGDSGMIGIYKIETEVISGSGKFEKTGLGYSREAKESIETAFRYFKANSRNMSSSISTTTKDYLMHIQDVNGVGMTSSLSLAAIIAMCSGALNKPVQSQLVILGSVSIGGTINKVEDLANTLQVCFDAGAKKILLPMVNAGDIALVPPELFAKFQIMFYSTAEDAVFKALGVQ
>LS483393.1|SQG39153.1|1699245_1700202_-|Domain-of-uncharacterised-function-(DUF1848)
MIISVSRRTDIPAFYSEWFFNRIKEGYVLVRNPFNKKQVSKVELNKDLVDCFVFWTKDPTLFLDRLDELKGYNYYFQFTLNSYWNDVELNVKKKSELIKVFRELSSKVGKEKVIWRYDPILLNPKYTKEYHYKWFEEIAKKLSGYTDKCVISFVDNYKETKKNEEELRLAYISNEDMINIASKLVKIADKYNIKIESCAEKIDLSKYGVEHGSCIDSKLIEKIVGKDLIIKRDSIREGCNCLKSIDIGEYNSCLHNCKYCYANYNSTLIHRNFETHKKDSSLLIGELNGEEKITEHYLCKEKKKENITYEQIDLFGGE
>LS483393.1|SQG39151.1|1698365_1699241_-|Uncharacterised-protein
MNIYEEILYQVYGYKLDDLNEKNSKNIKECIVELRKSYRNDTPITKYSQDDIRKAYMLAYYPNYAKLAYDITSKYILKHIDLEGLGKALNIVFWGAGPAAEVYGFCKALDNLKLNKRVRISISDLEKQWKEQREITKKLLRNLENIKASNFKDLSGCDLTYNCKNICFNWTSCEKTTFNSDIYFMQNCINHMSSDIKLYHNLFKRIELMKKGALFVIIDLNYENVKDTVHKLIDKSSNIADLIEGNIEFAPNISRFNYEIPDNAKKYIFTSENFLYPKKNTNYYFVVLKRR
>LS483393.1|SQG39148.1|1694223_1698363_-|helicase-family-protein-with-metal-binding-cysteine-cluster
MSYIENKINLCFDLLKFYEEQVRNSILANKVNEEDVSKILKDFKFKDEILFSLNKEYKRGNKIDKFCRENNIDLNIPNMLNFHGSLYKHQENAIKAILNNKHTIVSTGTGSGKTESFLIPIFDYCLKNIGKKGIKAIIIYPMNALAGDQLKRIDSAVKGTGITYAIFSGQTPTEAEKKKSNRTTILSREEIVKNKPDILVTNYVMLERILINQEYRSMLKSNDVALKYVVLDEIHTYNGNKALHLKFLLNRLRNFIDNDVIQIGSSATLSRKKNKEKTDGYISGDISKFICNMFDLKSDDEYCYIEPVYEEIRYNMPNIKNLKDRKLAEDKKTILIKEFLYKECRTLSEILKMLENHNIYLSEKEIKEYFIDILNLNLKYSENPILDFRIHIFLLGIGKTLKRCINCGTYYTVQVNKCNKCGHLLLPVYKKDTSLLLGALDNNEIKAPAQGINKKQNLVLLDFNNNEAKNIYSDVLYFDSFESNEETIKLIISREGTFKVYKDESIEADTLQLNTYNENMFLYRLLEKNLHGLKANERKILSFIDNRESCGRISTIFGDFLLGHFYYEIVKFINTKDGLDLDSIIRNSSKLLDEFSLNISDDIDINRKEAIKKDFLIWFRRCLVNKNFREYYELFDLSYKYEKNLSKLEKKILEIMLSEGLFYENTLYEFGKIIRIDKVSFEHGRGLSFNSFGGKSISLSDRAIKYKNLVNEYGTEKLIEAINGLLSKGFLVEVLQNNESLNKNKFGNSIFYLNFNKILLKTTKSNYNSVSEIAKNYLMFSGAHTSEVEFELKKEHEDDFQNGKLNLLFSTSTLEMGIDIGGLSFVYMLGVPPLPSNYAQRAGRAGRRGDRFAGIITICSEASQHDWYYFYNPKEIVEGLISPPRFDVNNKNVLNKHINTIIYSNLKDNIFSNISQQKKNELKFTCEKIFNMEIDIDTHINLLRDRLRKLHGRKEVNSFYKEAIYPEYCFNHKDVEFVISSSKKEHKESDEISISNREPEIAYKQCFPNTSLFIGEKLYKIIEDNNSKHFTSMLGNDVLSVWKYKCFDNEKNIKIEKTFIPKSDCIIIDLDYKMDLLKSKGPINIYYKDKMMIELISTLEQNSANKKELKVGYQLKRDAILLEFDSNVVSEEQYKSLSALLEKTIKLKFGLDENEISLIVDKNIIIANKKNENTKCKSYAILYDKSGNENIDFQYIANQLVNSINNCNGSTLLSDAYNIVINCTCEKDLGCYLCLKSYNTKLYSDKLRKSLAKNFIGYLIGKEKFKPQILVDIEVLKYEYELEIKISKGNFIFRNNEKDEIIEMIDNNQNKSIMTALYKKLKYIYLNDDIETIKIKSKDDYLVTGINGKTNINVPDKSFEFFNFYKQAFIKVVAEKSKI
>LS483393.1|SQG39146.1|1693674_1694205_-|Uncharacterised-protein
MVNNELENFARVEFSKVSVFLLKNFGIDIKEEKIINYGIKYKAVNKQNKSCKFNLYYNKKKKLSLVFENSQDQNLSNKIEEIFLNKDMLKDSEKELMGVYIDSSYKDFKSIANPSKNRYIDEIYIRLKPYENENIDFRIFGEELLKNINDEKDKRIILSNIDEFNILESIYKKNKI
>LS483393.1|SQG39145.1|1692364_1693660_-|Uncharacterised-protein
MNNLSERIKELNKAKLYGDVILLNDSIKDKSNYNKWTYYYVIDAMYKLKKYNEVLYLGKEFREKFGTDFSNVNNKIGWALYNLYIKDIDKNTKIEESFKVLDFIISNFKQEKFSPYEKSVNKVIKFLLDREDGKPINYNLINKYLDKLDPSLLSELENEINIDGETKKVASDREAWYGKKIKTLFNLERYEECLDKTEEAIENIKKFHNKGDLWIKYRQALCYIQLDDLEKSKNKLLEIENSLDHWCVFDKLYHIEKITGSYEEALRYASIAALKNNDHKMRIALYEDLGKYLSLNNLDLEAQYHYKLISLIRLEEEWKENKKIDDLITDKYVNSLNKKEIITYLKDFWKNKKYANVKFAKGEICKILNKDKNGFILGDDGITYYFIIKNFNQKVRNIKIGEKVNFIPSTGMDKKRHKVSYEAKDIEIIRK
>LS483393.1|SQG39143.1|1689086_1691954_+|putative-enterotoxin
MAVAIVHQQQQPNDKINIDLSNSNVAVVKSKKETNPPIKDEKQSKDKDNLKSDKKTEPKVEEKKQDKSNSKEENKAQVKTEPKVKEDKDIKKSSEEIKEEVKNQKPVIKEVKLPVEKDSKNSSENLSNNSSDFASDVNRRLYEYESVRSNQSNAMNEAIRLHNGDPSNTCVFFQGACLRAIGVPVPSHIGYTSNLWNWLENNNWEMHRDFSNIQKGDIIFAGEYHTMCFMGWKDKANGIAYVMGNEAYTYGDAYAHRNLNGQAPTKENGWNRQYRATRYYKYKGNSSKNNSDIVKTNIVTSKPVSSKDHKYTVEALKGTVTAKQDVYINEKPFPTTEGIKPVGLANGGDKLTVTGRASNGWYEVLYNGQKAYISHRYTDFLEEKEAPSKSSDSVTPLGVVKTNTSDKKSDSKEDNKKIESSLKDKDEKVNKGAESTEDKKVDESKDKATNKVESNKTEQSKPAESSKPVEETKKEESSKPYETVAKTAFIKANGGLWLHSSKDTSYSSRVTLMNNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYVTNPVFSESSTNKKVEENKATEPKKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRLAIMDKGEKVTILEENGEWFKVNYNGKTGFCASKYLSEPTTYEKQSESNKIEEVKNTSPSKAVEESKPTAPKKTVEENKPKKETETSKPTLTNIKRASVKANGGLWLHSTKDSSASSRITIMSNGEKVDILDESGSWYKVNYNGNMGWCSSQFLSNPTVISQSSQSKSVEENKPVYKNKTVEVSKPVNSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVDHNGNIGWCSSEFLTNPVTSKSNTVEESKPVHLVQSNTNETSLKSAHIKANGGLWLHSSKDSSTSSRLTVMGNGHNVEILEESGDWVKVRYNGNIGWCAKEFIA
>LS483393.1|SQG39141.1|1687027_1688479_-|lipoprotein
MLKNKKLMALILGGIIGTSSILAGCGSGGNASSSGGEGEEPVNLVWYVIGKPQTDGELVEEEVNKYIKDKINATVDIKHIDFGDYSQKMNVIANSGEEYDLAFTCSWAFPYLDNARKGAFLELNDLIDSHGKDLKNVIDERLWKGAEVDGNVYAVPNQKEIAGAPMWVFDKELVEKYDIPYEDIHTVDDLEPWLAVIKEKEPDFVPFYTQGDGIPLEGLEDITSGLGIFYDDESLTVKNMYETEELKHLFTKLREFYEKGYINQDAAVSNMKNEVKRFVWKADGQPYAENGWGQALGREVVTSSIVSPYVTNASTTGAMTAISSTSKQPEKAMELINLVNTDSTLRNLLMFGIEGTHYEKVSDNQIKGDPNGPYSVTSWAYGNLFDTYVLDSDPVDKWDAFEEFNQKAKTSTILGFKFDTEKVVTQMSAVSNTFKEFIKPLYTGSVETEETLEKLNKKLYDSGLEDIKVELQRQLDEWKKENK
>LS483393.1|SQG39138.1|1685748_1686915_-|NADPH-dependent-butanol-dehydrogenase
MARFTLPRDIYHGKDSLEVLKSLEGKKAFIVIGGGSMKRFGFLDKVLSYLKEANMETKVFEGVEPDPSVETVMKGAKEMEEFNPDWIVSIGGGSPIDAAKAMWIFYEYPDFTFEKAIVPFGLPKLRRKAKFVAIPSTSGTATEVTAFSVITDYKAKIKYPLADFEITPDIAIVDPSLAETMPEKLVAHTGMDALTHAIEAYTASLRSNFTDPLALKAIEMVNMHLVNSYKGDMEARGEMHEAQCLAGMAFSNALLGIVHSMAHKVGAVFHIPHGCANAIFLPYVIKYNRKACEDRYAQIARHIGLKGESERELTDAIIDLINKFNKELNIPSSMKEYGIDENEFKANLKFIAHNAVLDPCTGSNPREIDDETMEKLYTCAYYGSDVDF
>LS483393.1|SQG39160.1|1706333_1706642_-|CRISPR-associated-protein-Cas2
MRILVFFDLPVVEKEDRKEYQNFRRFLLNDGYLMIQFSVYSRICNGIDGVNKHVARLKENLPPKGSVRYLQITEKQYTEMKFLVGSPKKQEKKINSRQLNVF
>LS483393.1|SQG39163.1|1706649_1707549_-|CRISPR-associated-protein-Cas1
MSFRSLIISNSANLSIKNNNLLINNGEEFLVPIEDISVLLIEGVAVNLTARLLSKLSENNVATIICDEKHLPVSINMPINTHYKTYKVLKQQFSQSAAFSKRIWQSIIKQKLINQGKCLYILEISGYEFLNKLSDAVESGDKGNREAIGAKYYFKNLFGKAFVRDDENGINSALNYGYTILRSAIARSLVMYGFNTTLGVNHCNELNSFNLADDFIEPFRPIVDLWVAQNMDYDDILTKEDRIQLVDLLNYQCVIDGKNHSILNGIDKMISSYTTACSKKDFRLLKLPEIKPLEYHYYE
>LS483393.1|SQG39165.1|1707549_1710747_-|CRISPR-associated-protein,-Csn1-family
MNKDINYALGLDIGITSVGWAVINLDLNRIEDLGVRIFNAAENPKDGSSLALPRRLARGRRRLLRRKAYRVERVRKLIVKNNILNKEELEGLFKNKEVIDVWEARVKGLDYKLSREEWAKILINFCKRRGFKSNRKNEAKDKEAGQILSSISYNIEKMKETNSRTIGEYIYNEVKNSEDSYAPLRNKFGEYKMCVSRDVIREEIHTLFEKQRELGNNFASDEIEDKYFEIFNSQRPFSNFEDLEKLVGFCTFERKKHKRAPKHCISSEEFTLYEGINKLSIIKDGEKRKLSEEERTLVVNEAFNKKEIKYTTLRKLLGLSEEELFSTLTYSIDKDISKTENTKFVSLKGYHEIKRAIEKGVSKKAWQDIENNRNLLNDIAYVLTLGKTDDEIEKQLRLRNVPEELFESLLDMSFNKFNNLSIYALEKILPFMKEGYQYNEACEKAGYNFKAIYEGVRTKKLPVIEIDEIVNPVVNRALAQTRKVINSVIDKYGSPVRINIELARDLAKNFKDRKLIEKEQKENRANLDKIRENLRELMDKEPTVVEVLKYRLWEQQRGECAYTQSQIPLERLFSPGYCEIDHIIPFSRSFDDSLSNKILVLGSENQRKGNRTPYEYFGEDSERWNSFEIWVKGSYLNYKKKANLLKKKFSEEEQRDWKARNLQDTKYICRYISNFVNNRLEFKESENKQKVITVNGRATAYLRSRWGLNKVREDGDKHHALDAAVVGVTTQGMVQKISKYSKAHELYTVRKNDEFVDVETGECVDVDEYKEIRKDILPRPWRGFSEELKLRLSDNPLEELKKSPIETYNEEFIKENVKPIFVSRVPFRKISGKLFKETIYSERAFKDGYFVSKKSLVDLKRGDLDNFYNYECDKKLYDAISERMKEFNYNGKKAFESPFRKPTKSGKEGPVVISVKIKSAVPFKDGIPMNEGLVAKEGMVRIDIYEKEGKYFVVPVYRYQLAKGLVPKRAAIAKKDELKWPIMDQTYNFKFSIYKNDLIEVKYDKKGVYFGYYDGFDRNSASLTIEKHDNSERYRSIGLKVGVLEINKYEVDVLGNYHKVKLGGN
>LS483393.1|SQG39167.1|1711026_1714629_-|Eco57I-restriction-endonuclease
MDKGKIKSFAIWARRRLIESVSDKASKIGIFENEIKDVVAVQGGFKIVGSEEILPLSKEHRDALVSQIKDKGFEQVMEEVAYTWFNRFMGLRYMEVNEYLPSGIRILSSEVEGKSEPDVLSKVSEIIDELELNGEEIYALLDSGKNQDREKAYRIILVKQCNELGKIIPQMFEKISDYTELLLPDNLLEEGSVIRRMVSDIEEEDWKEEVEIIGWMYQYYISEKKDEVFAGLKKNIKITKENIPAATQLFTPKWIVKYMVENSLGRLWLEGHPNEELQRHWKYYLEEAEQEPEVEEELKKIREEHSKLTPEDLKVLDPCMGSGHILVYAFDVLYEIYKTAGYSEREIPRKILQNNLYGLDIDDRAAQLASFALIMKARHYNRRLFREIQREELDLNLCSIQESNGIEKEAIEYFSNGNKELQEDVEYLVKVFTDAKEYGSILEVEKVNFEEIKERLKEIEQEENLMFGDYRKMLLEKLPTLVKQAEIMSRKYEICVTNPPYMGRGNMGVKLKEYIDKKYILGKNDLYASFIVRGLNYVNKKSYFAAITQSSWMFLSYYNLLREEIINNKRLINLIQLGSRAFDEINGEVVQTAAFIISNGNIAKHRGTYSNLKDGKNSNEKKDKYLNNNTRYIVEQSYFNYIENTPIAYWINNNTRKLFTKVSVKNKIKTVGQILTGNNEKFLRFIWEVAEYDIGINSKWLKLAKGGGYRKWYGNINTIINWSEDAINHYRKDKIARIIPEDYWYKEGITWTRMSSDEPNFRILLENEVHDTAGSAFYVKNNEDYMNILALLNSVVSKYFLRILNPTLSSQLGDIEKIPYLLEDKNNINRLVLININLSRNDWDSFETSWDFKKHPLLKYLDNSDDNKISSAFSKWEEECENNFNQLKSNEEELNRIFIDIYGLQDELTPEVEDKDVTIRKADRERDIRSFISYAVGCILGRYSIDADGLIYAGGEFKDKWDLENKKVRKIEKDEDGNIISDSWVDATFLPDRDNIIPITEDEYFEDDMVSRFVDFVRTVYGEDTLEENLDFISDSIGRKGNETSRATIRRYFLKDFYKDHLKVYQKRPIYWMFESGKNNGFKALIYMHRYDEQIVAKVRTDYLHTLQRKYEAEIERVKLTMDSSEATAKEKTASKKKIDKIMKQIEECKEYDEVVAYLANEQINIDLDDGVKINYAKFQGVKIINSKNKETKMNLLAKI
>LS483393.1|SQG39168.1|1714639_1714948_-|Uncharacterised-protein
MGIKQMQGTSSYLEYVGPKGRKYKKNCIYNDDGICKCVKINCYMSKCVGRLYCTHYDDSEKKETNKNKTTFMDEINKLSEFGKERERFIESRREKMKINRKK
>LS483393.1|SQG39169.1|1714973_1718639_-|Uncharacterised-protein
MEANLGSMFYKKIDRPIKGVIKVGQSDEENVKQELEEYVVTRELSTHIDKFFEAYKEGILGITDKNGVWISGFFGSGKSHFLKILSYLLENKKIDEKRAVEYFNDKDLDNFTLGNMKQAGDISSDVILFNIDSKSDSDSKSNKDAIVNVFNKVFNEMQGFCGSMPWLADLERQMCKDGVYEDFKREFEEISGTPWIEAREDFYYEEDSIIEALAKTTKMSEEAARSWYDKCQDNYSLSIDKFASKVKEYCKSKGANHHVVFLVDEIGQYIGDNTQLMLNLQTVVEDLGTKCEGKCWVIVTSQEGLDEFTKVKGNDFSKIQGRFNTRLSLSSANVDEVIKKRILRKKDWATSHLKVLYEQKESIIKNLLTFTSDTAEMKLYKDSDDFAEVYPFVPYQFNLLQSAFNGVREHGASGKSLSKGERSLLGAYQQVAIEYMNKESNILIPFSAFYSTIETFLDSSIRSVIMKAERNDKLEDFDIEVLKLLFLIKYVKEIKANIENLATLLVDDIDISKKELKDKLNDSLKRLMRETLIQKNGDEYIFLTNDEQDVNKEIDNIFIETGDVVNKIGEIIFDDIYGEAKFSYSRKYIFSFNKAVDDRPRGSQNNDIGVKIITAAFDLSGDGDQFALKQLSVRENNVIVDISKDSNYFEEIENVLKIDSYLRVKSGSKSSIAIEDIKTKKSREREERLKRAKFLIEEDLKTCDIYANGNLLEIKEKNCVDRINEGLKSLVDSKYNKLNYVKEFKNGIDDLYGIMDKRVNQLSTLDMDQNRLAVDEVRNHIEQNSTRNLPITVKSVLTKFSNAPYGWKEIDIQGIIVTLFKNQDIKVIYNSEVLSPNNRDVVLCVTKKDRVERVNLKIREKVPNKYVDNLKDINSELFGFSSMPSDEDGMMNLFKDQCKTELNKIDAMLSCFGIMSYYPGEKTLKKGKGLFEEILSIGDTLEFFKTVYELDDDFADYIEDIEDIKKFFFNKENGRIDTNTNKGEQRKIFDDAIKTVDNYKINEAFIVDEDVDSIIKSIEVILRMAKPYGKIKDIPVLIGKYNDKIVELLEIKSEPVIDFIEGCKKEVLETLDNEEVKEKFSNKILEEFNSQIEKVEHSKSFMELSSMKEPAENLRLKWIQKIITENEVIKRREERKLSELTSTRGVGEEEPKNSYGNDNEVPVDKVKPVEIIQVKTKAVSVRELVKGEKIIKNEADIDAVIESLRRKLKNELEENTIINLI
>LS483393.1|SQG39171.1|1718703_1719285_-|Domain-of-uncharacterised-function-(DUF1788)
MKNIYDRVDEILPKITEPNFRENKGLGNEIGFYVFDYEPEYELLVRERVKSIKERAKRVYDLNIVEFDLYEVILEILDSKGYLKKNFDMEIKRGSEQVFNATKKALRLTLDNDLVVKYISERLEGADIVFLTGIGKAWPIIRSHTILNNLHRIVEKQPLVMFFPGNYDGGTLMLFNQLKDDNYYRAFQLVDKY
>LS483393.1|SQG39173.1|1719462_1720056_-|Putative-inner-membrane-protein-(DUF1819)
MEYKSTIKSRPYLYKETKKAVSLINKGLDVDGIKGKSLEDNIFQLESEARKKEVASIITSRIKVLDSYILNKIENSNIETSKILVLYAIAKTDRLFFEFLNEVYKEKIVLKDFYIRDKDFSVFFQSKKEQSEKVASWSEYTFKKLKQVYIRILFESGLIGNQKGDREIVVPIIDSDVKEYLYEIGSKPYADAILGID
>LS483393.1|SQG39175.1|1720234_1720912_-|Uncharacterised-protein
MDRIKSWEYDDVYNKFAIKDLDKSSFKRGSHIPIKVRKVFECEDIKYGDKKKITLIYKGEAFPAEIEGEIKGRIRMNWPKLIPKMKEVFKNEINDFEDSKELSVRVPRLKFTKETAIKYNVEMKTKYSHDVLCELERLEIDIENKTIEEINEVGEVIISKRLSEKEQELLNINKDIVINLEEGNKKFLKDHRYVFYDIEKEYVLEKELEISNKEIEVYSIELDVE
>LS483393.1|SQG39177.1|1721209_1721980_-|Predicted-membrane-protein
MSKMKKCKVCSKEIASNAKTCPECGAKNKKAIYKRPWFIILAIIIIIGAVGGSSYEDSTVANNETISEVEQNQDKEISNNQGEEKDVLVKENEEKVEEKEEKVEEEVPKEYKSALRKAKVYSDTMNMSKEGLYDQLTSEYGEKFSDEAAQYAMDNLEADWNKNALKKAKTYSDTMSMSKAGLYDQLTSEYGEKFTAEEAQYAVDNLDVNWKENALKKAKVYQETMAMSPSAIYDQLVSEYGEKFTEEEAQYAVDNL

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Crispr_ID: LS483393_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483393_4

2361759-2361871

Orphan

Consensus_repeat	Method
TTCTATTTAAATCTATTACTTTACATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483393_4

>merge|LS483393|4|2361759-2361871|CRISPRCasFinder
TTCTATTTAAATCTATTACTTTACATAAGAAATTATTCTAATTATTTTTAAAATAATAAATCTTTTTTGGAGACCTCTTCTTCTCTTCTATTTAAATTTATTACTTTACATAA

>LS483393|4|4|2361759-2361871|CRISPRCasFinder
TTCTATTTAAATCTATTACTTTACATAA	GAAATTATTCTAATTATTTTTAAAATAATAAATCTTTTTTGGAGACCTCTTCTTCTC
TTCTATTTAAATTTATTACTTTACATAA

Protein	Signature genes	Signature genes Name	Protein_function
LS483393.1\|SQG40251.1\|2359449_2359836_-\|stage-III-sporulation-protein-AD	unknown	unknown	gnl\|CDD\|131896
LS483393.1\|SQG40249.1\|2358266_2359439_-\|stage-III-sporulation-protein-AE	unknown	unknown	gnl\|CDD\|213743
LS483393.1\|SQG40264.1\|2365302_2365815_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|225076
LS483393.1\|SQG40235.1\|2355558_2355966_-\|transcription-antitermination-protein-NusB	unknown	unknown	gnl\|CDD\|234686
LS483393.1\|SQG40258.1\|2362416_2362974_-\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
LS483393.1\|SQG40257.1\|2361940_2362303_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG40238.1\|2356084_2356474_-\|alkaline-shock-protein	unknown	unknown	gnl\|CDD\|377129
LS483393.1\|SQG40266.1\|2365834_2366263_-\|type-IV-pilin	unknown	unknown	gnl\|CDD\|236714
LS483393.1\|SQG40244.1\|2357081_2357687_-\|stage-III-sporulation-protein-AG	unknown	unknown	gnl\|CDD\|274319
LS483393.1\|SQG40259.1\|2363144_2363492_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG40262.1\|2364474_2364885_-\|type-IV-pilin	unknown	unknown	unknown
LS483393.1\|SQG40269.1\|2366255_2367275_-\|fimbrial-assembly-protein	unknown	unknown	gnl\|CDD\|224376
LS483393.1\|SQG40241.1\|2356558_2357056_-\|stage-III-sporulation-protein-AH	unknown	unknown	gnl\|CDD\|378918
LS483393.1\|SQG40263.1\|2364871_2365168_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG40253.1\|2360196_2360712_-\|stage-III-sporulation-protein-SpoAB	unknown	unknown	gnl\|CDD\|131880
LS483393.1\|SQG40252.1\|2359923_2360121_-\|stage-III-sporulation-protein-AC	unknown	unknown	gnl\|CDD\|131895
LS483393.1\|SQG40261.1\|2363888_2364506_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG40254.1\|2360858_2361743_-\|stage-III-sporulation-protein-AA	unknown	unknown	gnl\|CDD\|274324
LS483393.1\|SQG40260.1\|2363488_2363929_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483393.1\|SQG40246.1\|2357701_2358259_-\|stage-III-sporulation-protein-AF	unknown	unknown	gnl\|CDD\|131942

Protein	Function_ID	Function_description	E-value
LS483393.1\|SQG40251.1\|2359449_2359836_-\|stage-III-sporulation-protein-AD	gnl\|CDD\|131896	TIGR02849, Stage_III_sporulation_protein_AD, stage III sporulation protein AD. Members of this family are the uncharacterized protein SpoIIIAD, part of the spoIIIA operon that acts at sporulation stage III as part of a cascade of events leading to endospore formation. Note that the start sites of members of this family as annotated tend to be variable; quite a few members have apparent homologous protein-coding regions continuing upstream of the first available start codon. The length of the alignment and the scoring cutoff thresholds for the model have been set to try to detect all valid members of the family, even if annotation of the start site begins too far downstream. [Cellular processes, Sporulation and germination].	5.58273e-33
LS483393.1\|SQG40249.1\|2358266_2359439_-\|stage-III-sporulation-protein-AE	gnl\|CDD\|213743	TIGR02829, Stage_III_sporulation_protein_AE, stage III sporulation protein AE. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is found in a spore formation operon and is designated stage III sporulation protein AE. [Cellular processes, Sporulation and germination].	3.04994e-149
LS483393.1\|SQG40235.1\|2355558_2355966_-\|transcription-antitermination-protein-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	2.5545e-50
LS483393.1\|SQG40258.1\|2362416_2362974_-\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	2.22205e-107
LS483393.1\|SQG40264.1\|2365302_2365815_-\|Uncharacterised-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	0.000623571
LS483393.1\|SQG40238.1\|2356084_2356474_-\|alkaline-shock-protein	gnl\|CDD\|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	5.69298e-30
LS483393.1\|SQG40266.1\|2365834_2366263_-\|type-IV-pilin	gnl\|CDD\|236714	PRK10557, PRK10557, prepilin peptidase-dependent protein.	0.00245866
LS483393.1\|SQG40244.1\|2357081_2357687_-\|stage-III-sporulation-protein-AG	gnl\|CDD\|274319	TIGR02830, Stage_III_sporulation_protein_AG, stage III sporulation protein AG. CC A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is found in a spore formation operon and is designated stage III sporulation protein AG. [Cellular processes, Sporulation and germination].	2.26928e-69
LS483393.1\|SQG40269.1\|2366255_2367275_-\|fimbrial-assembly-protein	gnl\|CDD\|224376	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].	1.10653e-52
LS483393.1\|SQG40241.1\|2356558_2357056_-\|stage-III-sporulation-protein-AH	gnl\|CDD\|378918	pfam12685, SpoIIIAH, SpoIIIAH-like protein. Stage III sporulation protein AH (SpoIIIAH) is a protein that is involved in forespore engulfment. It forms a channel with SpoIIIAH that is open on the forespore end and closed (or gated) on the mother cell end. This allows sigma-E-directed gene expression in the mother-cell compartment of the sporangium to trigger the activation of sigma-G forespore-specific gene expression by a pathway of intercellular signaling. This family of proteins is found in bacteria, archaea and eukaryotes and so must have a wider function that in sporulation. Proteins in this family are typically between 174 and 223 amino acids in length.	3.45938e-23
LS483393.1\|SQG40253.1\|2360196_2360712_-\|stage-III-sporulation-protein-SpoAB	gnl\|CDD\|131880	TIGR02833, Stage_III_sporulation_protein_AB, stage III sporulation protein AB. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage III sporulation protein AB. [Cellular processes, Sporulation and germination].	1.85407e-76
LS483393.1\|SQG40252.1\|2359923_2360121_-\|stage-III-sporulation-protein-AC	gnl\|CDD\|131895	TIGR02848, Stage_III_sporulation_protein_AC, stage III sporulation protein AC. Members of this protein family are designated SpoIIIAC, part of the spoIIIA operon of sporulation genes whose mutant phenotype is linked to sporulation stage III. Members of this family are encoded by the genome of a species if and only if that species is capable of endospore formation, as in Bacillus subtilis. The molecular function of this small, probable integral membrane protein is unknown. [Cellular processes, Sporulation and germination].	1.97477e-14
LS483393.1\|SQG40254.1\|2360858_2361743_-\|stage-III-sporulation-protein-AA	gnl\|CDD\|274324	TIGR02858, Stage_III_sporulation_protein_AA, stage III sporulation protein AA. Members of this protein are the stage III sporulation protein AA, encoded by one of several genes in the spoIIIA locus. It seems that this protein is found in a species if and only if that species is capable of endospore formation. [Cellular processes, Sporulation and germination].	1.56037e-161
LS483393.1\|SQG40246.1\|2357701_2358259_-\|stage-III-sporulation-protein-AF	gnl\|CDD\|131942	TIGR02896, Stage_III_sporulation_protein_AF, stage III sporulation protein AF. This family represents the stage III sporulation protein AF of the bacterial endospore formation program, which exists in some but not all members of the Firmicutes (formerly called low-GC Gram-positives). The C-terminal region of this protein is poorly conserved, so only the N-terminal region, which includes two predicted transmembrane domains, is included in the seed alignment. [Cellular processes, Sporulation and germination].	5.28448e-24

>LS483393.1|SQG40254.1|2360858_2361743_-|stage-III-sporulation-protein-AA
MKEIFDVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAIIQKISNYSLYAFEEDIRQGYITIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV
>LS483393.1|SQG40253.1|2360196_2360712_-|stage-III-sporulation-protein-SpoAB
MKVFFLLIIVLLSSLIGYLYGEGFRNRLSQLRELKRALIDFENDIVYTYTPLPESIESIALKAKSPIKELFNEISFKLKNNEVENVYMAFKESINEHKKEMNLRNKDFEILLDLSKSLGETNVEGQIKIFNLAKEKLDIELEIAEDECNKNTKVYRYLGVAVGAMIAIFLV
>LS483393.1|SQG40252.1|2359923_2360121_-|stage-III-sporulation-protein-AC
MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF
>LS483393.1|SQG40251.1|2359449_2359836_-|stage-III-sporulation-protein-AD
MDVVIQVISFVLISLFLYLVLKDNKSTFAVFLLLGAGIVIFLFVMPYVNEIIAFMQDIARESGMDSSYIAIVMKIIAIAYLSTFCSYICNDAGVTVLGKKVEFTGKIMILLLAIPIMANILNSILSIM
>LS483393.1|SQG40249.1|2358266_2359439_-|stage-III-sporulation-protein-AE
MKKLINIILLSLIFVFCFNLKVLANDNLESSKEKIDNDSRIERFYDYINNLETEEDILGNMSAKEYIMNYLESGEDPITLKKIGASILSYIFRELNIVLKFIASILVIALLSALLKNLQDAFNIEEGVTQIAFFACYALLIMLLTKSFFISLNLGKEVLTSIIDFMNVIVPVIVMLIATSGGVTSAVTIDPIVLGAVSITPRIYTYFLFPLILAYFTLQFVNNLSSEFKIDRMCKFIKQVVMISQGFILTIFVGILTLRGMTADTLDAVAVKTVKFAVDNFVPIVGKAFSDAITTVAGYSLAMKSVITSLGVIVIVVIVIYPIIKIGLMAICFKLTSAVIEPVVDSKISSSVETVGEALFMIMSCIISVSIMFFIMASMMATAGNFIVGG
>LS483393.1|SQG40246.1|2357701_2358259_-|stage-III-sporulation-protein-AF
MELLKNWISTLCVVIVIISIAHIILPNSSIKKHVKFAFSLIILSVMLSPIIGLLTMNKDIDETVFQEKISDITRSDEEKKSLYDEEAILKSVEKNLEKSLKDEFYENEFEVNLIGKIDFDEVKFNIEKAEITVLDEKKVKKVDKVVVGKEKVNKEEKKDSFLEKIEKFVEKELEISHENIIVSYA
>LS483393.1|SQG40244.1|2357081_2357687_-|stage-III-sporulation-protein-AG
MHELKEKIANLFKQKNITNLIILLLLVIMFYLVVSYFTGVNNITKSEKTNLEKVSKEDMNSNSQKDSEVLSYQEKQEKDLERILGKINGVGSVDVVINFQSSEVKVPAVDNSSQKSTTEETDSEGGTRVNSQETDGDKIVMSNSSNGSEPVILKTEKPEVLGVMVVAEGAEDSKIKYEITKAISSLYNISVDKVNVLAMKK
>LS483393.1|SQG40241.1|2356558_2357056_-|stage-III-sporulation-protein-AH
MNRKQAGIILTLLALIVCTGVLATRVNNQIKESMGEVPTAFGENDDNATETSSNYFYESRNLREQKDSKTIDNLKAIVEDKNTSAEQKEEAEKELTEKTMARDYETRIELSIKSKGYEDVICFIDGDNAKVVVKTNEELTQEKMVEIQDIVMNVSKVYDVDIEKK
>LS483393.1|SQG40238.1|2356084_2356474_-|alkaline-shock-protein
MNEMNRDEANLGIVNISDEVIGVVAGIAASEIDGILEINHNNSTGIGHKFSKKSLGKGIKVNVENGEAVIEIGVTVQYGIKIPDVVSQVQENVRRTVEAITGLKVALVNIYVQNIIILKEEDKNEILKK
>LS483393.1|SQG40235.1|2355558_2355966_-|transcription-antitermination-protein-NusB
MNRVKSREYLLQLAYQMEITSETALETFNSFMENEDISKDDLDLAYIKSGLLGIEENKEKLDSLIESQLVKWKLNRISKVNLSILRISTYEILFAEDVPGKVSINEAIELCKKYSDNKSVSFINGVLDKVYKNMQ
>LS483393.1|SQG40257.1|2361940_2362303_-|Uncharacterised-protein
MKDIKNNISNLLKAMDKNTELDKEFKDSLLNVISSLVDKIEELQVNVETLDENVNLLNDDLSGVQDELFEELTLEELEEYDDEYCEVVCDKCHKPIYIEKDILNRSESIPCPYCGNEFEV
>LS483393.1|SQG40258.1|2362416_2362974_-|elongation-factor-P
MISGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELYYFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKGEAFSVEAPNFVELLITECEPSVKGNTATTAMKTAVVETGATVMVPMFVEEGNTIRIDTRTGEYMERV
>LS483393.1|SQG40259.1|2363144_2363492_-|Uncharacterised-protein
MKKLKLDVTLATIFIVILLVQGIELFQLRNYEIPVLTNSIGEMDLNTVLKNIENKDCTVLQLEYKEGWIGKVLFTGSLEDLSNYVNLLKNNNINIKNYKIEKSEELRCFLDLKVV
>LS483393.1|SQG40260.1|2363488_2363929_-|Uncharacterised-protein
MRLEVRRIYIKKYKNFLPIEYVEEYNRKIKKKLNIYILLLLLFNLFFYGKIKTENNKIKNYLSEIKGVNRERSLDKEFLEDINKLKEIIKDEKILNLSLERKSFEVEVNSIYKNSLINYINKINGRVYDISLNESNNTYRLKGELR
>LS483393.1|SQG40261.1|2363888_2364506_-|Uncharacterised-protein
MSLLIKTLVINDTNDISKLKELKDKRVKIILLNEKIFIETLRVDKKCNIEEKIEQLIRDRFFNYTPLVHYEVLKYKKSLFLIVYFIGCDERFKSLLYERKDFALTFPELKNKNILSFKKATFELKNLKISIYIKGKLVLLKSVKDSNIIEVIEESLKGLEKDFGVSLKDFTFKIQKEYLKEEIKEWFKGLKLNEIRGEENLYQKI
>LS483393.1|SQG40262.1|2364474_2364885_-|type-IV-pilin
MKRRKGFVSIEVMLVSLICSMIVTILMDNSFQRRKELDRSFKIISSNIDKNNSEEQFLKYMLKEKILNIDNINKLDFTLNNMNATYIEDKKAIHIKSKDKISGVFKDTYYGIDFRNDDIILSKRGNYEFVNKDLSN
>LS483393.1|SQG40263.1|2364871_2365168_-|Uncharacterised-protein
MYLNHRFWDNMVENIKINKDKNYILVKFWRDGIVAEDKIEKIKNKLYVYYNYTGYGRNYSPALIEDVEKFDLMEKGNLFYIKLKVKNQEERIYCYEKA
>LS483393.1|SQG40264.1|2365302_2365815_-|Uncharacterised-protein
MEDKINKKKGYLLVDMVLALALISILFLGIGKSYSTYIKNNYYIKEKIKVAEIINSLAMELKHNISFEDLRSINSGTYKISSLKINDLINSDIKEFLRKNLILHNKNHNDLGWTINISHFDQYESIINIIYKNEKPYISENKEVKIYKFLEKSFQNLENPPQKEEEKHIY
>LS483393.1|SQG40266.1|2365834_2366263_-|type-IV-pilin
MYRKRKGFTLSEVIIYLAITSLILAIPTSFMIIKDRGYELKVEGEISKIHDFLMEAKQLSKKDNLYGEIIFDILDNKLIYENALRTTSLKLNEVKVSFNRDNLITINETGMISISGTITIIDKNNKRREITIVPGIWKINVK
>LS483393.1|SQG40269.1|2366255_2367275_-|fimbrial-assembly-protein
MFGFKDEASYICLNLSTYVKSGMPIGRSLDLIKNTVKDKKYKESLKRIEKKVLNGEALSKAFKEEGNLYPDLMKDMMKIGEESGNLEEVLEKCARNILAEKEIKNKIIKSLRYPISLLIGLIIMIFGYVTYILPQFVDMYELRGIEGSKIMTLLNNYINFVEENPNVEVIVFCYFSCVLISLYLFFKVIPSEKILEKIEVYRMYYEIRILFLISMILNSGISLNNSLSVFGESLSDVKLRKYIKSINEELIKGTTLSSSIWKINVISHVSKGFLITGEESGLFSKNIEELLKIREKDFDRALNKTVGKIEPAMFIILGFVISAMMLLVLVPTFEGMKYV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	LS483393.1	2496813-2496836	0	1.0

1. spacer 3.19|1706154|24|LS483393|PILER-CR matches to position: 2496813-2496836, mismatch: 0, identity: 1.0

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagcaaatatattagaaattc	Protospacer
************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_KY652381	Escherichia coli strain WCHEC050622 plasmid pIncX4_WCHEC1622, complete sequence	3381-3404	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP011290	Salmonella enterica subsp. diarizonae strain 11-01853 plasmid unnamed1, complete sequence	4479-4502	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP026728	Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence	24401-24424	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP016008	Escherichia coli strain NGF1 plasmid pNGF1_pCROD2_like, complete sequence	4720-4743	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP035754	Escherichia coli E110019 plasmid pE110019_33, complete sequence	21298-21321	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP044138	Escherichia coli O157 strain AR-0430 plasmid pAR-0430-2, complete sequence	16890-16913	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP010880	Escherichia coli strain MNCRE44 plasmid pMNCRE44_4, complete sequence	23526-23549	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP031616	Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C3, complete sequence	2998-3021	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP024861	Escherichia coli strain AR_0014 plasmid unitig_2_pilon, complete sequence	7046-7069	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP040725	Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_3, complete sequence	11599-11622	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP018950	Escherichia coli strain Ecol_276 plasmid pEC276_3, complete sequence	29010-29033	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_019128	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_34, complete sequence	8061-8084	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_019130	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_34, complete sequence	8061-8084	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_LS992170	Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence	26467-26490	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP033879	Escherichia coli strain 50579417 plasmid p50579417_5, complete sequence	25471-25494	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP033849	Escherichia coli strain FDAARGOS_497 plasmid unnamed3, complete sequence	5951-5974	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_010657	Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence	7732-7755	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	CP052800	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence	13708-13731	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP023829	Escherichia coli strain 4/4 plasmid p4_4.3, complete sequence	7732-7755	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	CP052790	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN19S0552-2, complete sequence	33968-33991	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_022105	Escherichia coli strain ECSAM7 plasmid pSAM7, complete sequence	2910-2933	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_KM580533	Escherichia coli strain GXEC6 plasmid pGXEC6, complete sequence	2132-2155	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_KM212169	Escherichia coli strain 8ZG6D plasmid pSD11, complete sequence	2133-2156	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_KM580532	Escherichia coli strain GXEC3 plasmid pGXEC3, complete sequence	2132-2155	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP045764	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence	31517-31540	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	19344-19367	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP048333	Escherichia coli strain 10 plasmid p010_C, complete sequence	2951-2974	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	14713-14736	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP029728	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed8, complete sequence	20784-20807	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP035775	Klebsiella pneumoniae strain R46 plasmid pR46-42, complete sequence	29726-29749	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_013718	Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence	8803-8826	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP019016	Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence	8752-8775	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	118159-118182	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_LT985318	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p	2133-2156	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP023373	Escherichia coli strain 1283 plasmid p31, complete sequence	1944-1967	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP023905	Escherichia coli strain FDAARGOS_433 plasmid unnamed5, complete sequence	7007-7030	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	7161-7184	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	4358-4381	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	1854-1877	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_021841	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence	14610-14633	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP040594	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed1, complete sequence	11103-11126	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP029976	Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence	2116-2139	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP021735	Escherichia coli strain AR_0114 plasmid unitig_4, complete sequence	19636-19659	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_CP026942	Escherichia coli strain CFS3313 plasmid pCFS3313-3, complete sequence	1944-1967	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NC_021079	Klebsiella pneumoniae strain Kp002 plasmid pJEG012, complete sequence	4031-4054	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_LT985276	Escherichia coli strain 707 plasmid RCS67_p, complete sequence	1944-1967	3	0.875
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_KY865319	Escherichia coli strain SY3018 plasmid pEC14cfr, complete sequence	2133-2156	3	0.875
LS483393_3	3.18\|1705321\|24\|LS483393\|PILER-CR	1705321-1705344	24	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	321707-321730	4	0.833
LS483393_3	3.18\|1705321\|24\|LS483393\|PILER-CR	1705321-1705344	24	MN694034	Marine virus AFVG_250M807, complete genome	13917-13940	4	0.833
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	NZ_AP017969	Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence	43882-43905	4	0.833
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	LR588166	Pseudomonas phage vB_PaeM_MIJ3	162110-162133	4	0.833
LS483393_3	3.19\|1706154\|24\|LS483393\|PILER-CR	1706154-1706177	24	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	278634-278657	4	0.833
LS483393_3	3.3\|1705363\|29\|LS483393\|CRISPRCasFinder,CRT	1705363-1705391	29	NC_019772	Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence	146384-146412	5	0.828
LS483393_3	3.3\|1705363\|29\|LS483393\|CRISPRCasFinder,CRT	1705363-1705391	29	MN693034	Marine virus AFVG_117M74, complete genome	57066-57094	5	0.828
LS483393_3	3.8\|1705691\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705691-1705720	30	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	24495-24524	5	0.833
LS483393_3	3.8\|1705691\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705691-1705720	30	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	20020-20049	5	0.833
LS483393_3	3.8\|1705691\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705691-1705720	30	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	54134-54163	5	0.833
LS483393_3	3.8\|1705691\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705691-1705720	30	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	17583-17612	5	0.833
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_027331	Citrobacter phage Moon, complete genome	119195-119224	5	0.833
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	MG250484	Citrobacter phage CF1 ERZ-2017, complete genome	119989-120018	5	0.833
LS483393_3	3.1\|1705232\|29\|LS483393\|CRISPRCasFinder,CRT	1705232-1705260	29	KC465899	Pelagibacter phage HTVC008M, complete genome	106269-106297	6	0.793
LS483393_3	3.1\|1705232\|29\|LS483393\|CRISPRCasFinder,CRT	1705232-1705260	29	AP018320	Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome	235925-235953	6	0.793
LS483393_3	3.3\|1705363\|29\|LS483393\|CRISPRCasFinder,CRT	1705363-1705391	29	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	135071-135099	6	0.793
LS483393_3	3.3\|1705363\|29\|LS483393\|CRISPRCasFinder,CRT	1705363-1705391	29	MN694669	Marine virus AFVG_250M354, complete genome	35073-35101	6	0.793
LS483393_3	3.3\|1705363\|29\|LS483393\|CRISPRCasFinder,CRT	1705363-1705391	29	MN693186	Marine virus AFVG_25M505, complete genome	18613-18641	6	0.793
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	55719-55748	6	0.8
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_AP014830	Geminocystis sp. NIES-3709 plasmid pGM3709_09, complete sequence	2361-2390	6	0.8
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_AP014831	Geminocystis sp. NIES-3709 plasmid pGM3709_10, complete sequence	1356-1385	6	0.8
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	MN038178	Bacillus phage Beyonphe, complete genome	140143-140172	6	0.8
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NC_031100	Bacillus phage Phrodo, complete genome	139905-139934	6	0.8
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	KF669647	Bacillus phage BigBertha, complete genome	141011-141040	6	0.8
LS483393_3	3.9\|1705757\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705757-1705786	30	NZ_CP043057	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence	59361-59390	6	0.8
LS483393_3	3.9\|1705757\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705757-1705786	30	MN732896	Elizabethkingia phage TCUEAP1, complete genome	26758-26787	6	0.8
LS483393_3	3.13\|1706021\|29\|LS483393\|CRISPRCasFinder,CRT	1706021-1706049	29	MN693407	Marine virus AFVG_25M242, complete genome	3898-3926	6	0.793
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	AP019561	Staphylococcus phage SP197 DNA, complete genome	31122-31151	6	0.8
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	MT423824	Staphylococcus virus pSp_SNUABM-S, complete genome	6306-6335	6	0.8
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	MT423823	Staphylococcus virus pSp_SNUABM-J, complete genome	6884-6913	6	0.8
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	AP019560	Staphylococcus phage SP120 DNA, complete genome	14655-14684	6	0.8
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	AP019562	Staphylococcus phage SP276 DNA, complete genome	11721-11750	6	0.8
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	KJ019152	Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome	117808-117837	6	0.8
LS483393_3	3.1\|1705232\|29\|LS483393\|CRISPRCasFinder,CRT	1705232-1705260	29	NC_019526	Enterobacteria phage vB_KleM-RaK2, complete genome	73112-73140	7	0.759
LS483393_3	3.1\|1705232\|29\|LS483393\|CRISPRCasFinder,CRT	1705232-1705260	29	AB897757	Klebsiella phage K64-1 DNA, complete genome	73083-73111	7	0.759
LS483393_3	3.3\|1705363\|29\|LS483393\|CRISPRCasFinder,CRT	1705363-1705391	29	MN693371	Marine virus AFVG_25M511, complete genome	18824-18852	7	0.759
LS483393_3	3.5\|1705494\|29\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705494-1705522	29	NZ_CP041954	Klebsiella pneumoniae strain KP2 plasmid pKP2_8, complete sequence	14453-14481	7	0.759
LS483393_3	3.5\|1705494\|29\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705494-1705522	29	NZ_CP032306	Salmonella enterica subsp. enterica serovar Braenderup strain FORC93 plasmid unnamed2, complete sequence	13783-13811	7	0.759
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	896306-896335	7	0.767
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NC_010405	Paulownia witches'-broom phytoplasma plasmid pPaWBNy-1, complete sequence	801-830	7	0.767
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	MK554696	Fusobacterium phage Fnu1, complete genome	117743-117772	7	0.767
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_CP028863	Borreliella garinii strain 20047 plasmid lp28-4, complete sequence	34764-34793	7	0.767
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_CP018336	Clostridium kluyveri strain JZZ plasmid unnamed, complete sequence	48145-48174	7	0.767
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NC_013164	Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence	2487-2516	7	0.767
LS483393_3	3.12\|1705955\|30\|LS483393\|CRISPRCasFinder,CRT	1705955-1705984	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	69487-69516	7	0.767
LS483393_3	3.12\|1705955\|30\|LS483393\|CRISPRCasFinder,CRT	1705955-1705984	30	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	48315-48344	7	0.767
LS483393_3	3.12\|1705955\|30\|LS483393\|CRISPRCasFinder,CRT	1705955-1705984	30	GU071094	Synechococcus phage S-SM1, complete genome	89365-89394	7	0.767
LS483393_3	3.13\|1706021\|29\|LS483393\|CRISPRCasFinder,CRT	1706021-1706049	29	MK288021	Bacillus phage pW2, complete genome	34620-34648	7	0.759
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	MK448692	Streptococcus phage Javan173, complete genome	1471-1500	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_AP017969	Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence	43878-43907	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_022105	Escherichia coli strain ECSAM7 plasmid pSAM7, complete sequence	2908-2937	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_KM580533	Escherichia coli strain GXEC6 plasmid pGXEC6, complete sequence	2130-2159	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_KM212169	Escherichia coli strain 8ZG6D plasmid pSD11, complete sequence	2131-2160	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_KM580532	Escherichia coli strain GXEC3 plasmid pGXEC3, complete sequence	2130-2159	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP045764	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence	31515-31544	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	19342-19371	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP048333	Escherichia coli strain 10 plasmid p010_C, complete sequence	2949-2978	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	14711-14740	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP029728	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed8, complete sequence	20782-20811	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP035775	Klebsiella pneumoniae strain R46 plasmid pR46-42, complete sequence	29724-29753	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_013718	Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence	8801-8830	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP019016	Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence	8750-8779	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	118157-118186	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_LT985318	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p	2131-2160	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP023373	Escherichia coli strain 1283 plasmid p31, complete sequence	1942-1971	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP023905	Escherichia coli strain FDAARGOS_433 plasmid unnamed5, complete sequence	7005-7034	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	7159-7188	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	4356-4385	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	1852-1881	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_021841	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence	14608-14637	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP040594	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed1, complete sequence	11101-11130	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP029976	Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence	2114-2143	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP021735	Escherichia coli strain AR_0114 plasmid unitig_4, complete sequence	19634-19663	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP026942	Escherichia coli strain CFS3313 plasmid pCFS3313-3, complete sequence	1942-1971	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_021079	Klebsiella pneumoniae strain Kp002 plasmid pJEG012, complete sequence	4029-4058	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_LT985276	Escherichia coli strain 707 plasmid RCS67_p, complete sequence	1942-1971	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_KY865319	Escherichia coli strain SY3018 plasmid pEC14cfr, complete sequence	2131-2160	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_KY652381	Escherichia coli strain WCHEC050622 plasmid pIncX4_WCHEC1622, complete sequence	3377-3406	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP011290	Salmonella enterica subsp. diarizonae strain 11-01853 plasmid unnamed1, complete sequence	4475-4504	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP026728	Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence	24397-24426	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP016008	Escherichia coli strain NGF1 plasmid pNGF1_pCROD2_like, complete sequence	4716-4745	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP035754	Escherichia coli E110019 plasmid pE110019_33, complete sequence	21294-21323	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP044138	Escherichia coli O157 strain AR-0430 plasmid pAR-0430-2, complete sequence	16886-16915	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP010880	Escherichia coli strain MNCRE44 plasmid pMNCRE44_4, complete sequence	23522-23551	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP031616	Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C3, complete sequence	2994-3023	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP024861	Escherichia coli strain AR_0014 plasmid unitig_2_pilon, complete sequence	7042-7071	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP040725	Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_3, complete sequence	11595-11624	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP018950	Escherichia coli strain Ecol_276 plasmid pEC276_3, complete sequence	29006-29035	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_019128	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_34, complete sequence	8057-8086	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_019130	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_34, complete sequence	8057-8086	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_LS992170	Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence	26463-26492	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP033879	Escherichia coli strain 50579417 plasmid p50579417_5, complete sequence	25467-25496	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP033849	Escherichia coli strain FDAARGOS_497 plasmid unnamed3, complete sequence	5947-5976	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NC_010657	Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence	7728-7757	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	CP052800	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence	13704-13733	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	NZ_CP023829	Escherichia coli strain 4/4 plasmid p4_4.3, complete sequence	7728-7757	7	0.767
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	CP052790	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN19S0552-2, complete sequence	33964-33993	7	0.767
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	MN694034	Marine virus AFVG_250M807, complete genome	13917-13946	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	MG770897	Staphylococcus phage SH-St 15644, complete genome	19956-19985	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	MT366568	Staphylococcus phage R4, complete genome	20105-20134	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	AP012341	Staphylococcus phage phi7401PVL DNA, complete genome	40787-40816	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	KF598856	Staphylococcus phage YMC/09/04/R1988, complete genome	19867-19896	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	MG029515	Staphylococcus phage phiSa2wa_st80, complete genome	39213-39242	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	JX174275	Staphylococcus phage LH1, complete genome	20107-20136	8	0.733
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_KY086101	Rice orange leaf phytoplasma strain ROL1 plasmid pROL1, complete sequence	801-830	8	0.733
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NC_019533	Wheat blue dwarf phytoplasma plasmid pWBD2, complete sequence	801-830	8	0.733
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NC_019535	Wheat blue dwarf phytoplasma plasmid pWBD1, complete sequence	801-830	8	0.733
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_CP018869	Sporosarcina sp. P37 plasmid pSporoP37, complete sequence	49978-50007	8	0.733
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	12252-12281	8	0.733
LS483393_3	3.7\|1705625\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705625-1705654	30	KT895374	Bacillus phage vB_BpuM-BpSp, complete genome	19136-19165	8	0.733
LS483393_3	3.8\|1705691\|30\|LS483393\|CRISPRCasFinder,CRT,PILER-CR	1705691-1705720	30	NC_004565	Clostridium tetani E88 plasmid pE88, complete sequence	4950-4979	8	0.733
LS483393_3	3.12\|1705955\|30\|LS483393\|CRISPRCasFinder,CRT	1705955-1705984	30	MG198570	Lake Baikal phage Baikal-20-5m-C28, complete genome	8410-8439	8	0.733
LS483393_3	3.12\|1705955\|30\|LS483393\|CRISPRCasFinder,CRT	1705955-1705984	30	MG198570	Lake Baikal phage Baikal-20-5m-C28, complete genome	8482-8511	8	0.733
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	MH552499	Podoviridae sp. isolate ctcf755, complete genome	4817-4846	8	0.733
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	321707-321736	9	0.7
LS483393_3	3.12\|1705955\|30\|LS483393\|CRISPRCasFinder,CRT	1705955-1705984	30	KU594606	Cyanophage S-RIM32 isolate RW_108_0702, complete genome	102518-102547	9	0.7
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	MN693854	Marine virus AFVG_250M929, complete genome	25520-25549	9	0.7
LS483393_3	3.14\|1706086\|30\|LS483393\|CRISPRCasFinder,CRT	1706086-1706115	30	MN694256	Marine virus AFVG_250M930, complete genome	25374-25403	9	0.7
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	LR588166	Pseudomonas phage vB_PaeM_MIJ3	162108-162137	9	0.7
LS483393_3	3.15\|1706152\|30\|LS483393\|CRISPRCasFinder,CRT	1706152-1706181	30	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	278632-278661	9	0.7
LS483393_3	3.2\|1705297\|30\|LS483393\|CRISPRCasFinder,CRT	1705297-1705326	30	NZ_LR134422	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 13	184205-184234	10	0.667

1. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_KY652381 (Escherichia coli strain WCHEC050622 plasmid pIncX4_WCHEC1622, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

2. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP011290 (Salmonella enterica subsp. diarizonae strain 11-01853 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

3. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP026728 (Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

4. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP016008 (Escherichia coli strain NGF1 plasmid pNGF1_pCROD2_like, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

5. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP035754 (Escherichia coli E110019 plasmid pE110019_33, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

6. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP044138 (Escherichia coli O157 strain AR-0430 plasmid pAR-0430-2, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

7. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP010880 (Escherichia coli strain MNCRE44 plasmid pMNCRE44_4, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

8. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP031616 (Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

9. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP024861 (Escherichia coli strain AR_0014 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

10. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP040725 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

11. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP018950 (Escherichia coli strain Ecol_276 plasmid pEC276_3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

12. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_019128 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_34, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

13. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_019130 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_34, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

14. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_LS992170 (Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

15. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP033879 (Escherichia coli strain 50579417 plasmid p50579417_5, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

16. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP033849 (Escherichia coli strain FDAARGOS_497 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

17. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_010657 (Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

18. spacer 3.19|1706154|24|LS483393|PILER-CR matches to CP052800 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

19. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP023829 (Escherichia coli strain 4/4 plasmid p4_4.3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

20. spacer 3.19|1706154|24|LS483393|PILER-CR matches to CP052790 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN19S0552-2, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

21. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_022105 (Escherichia coli strain ECSAM7 plasmid pSAM7, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

22. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_KM580533 (Escherichia coli strain GXEC6 plasmid pGXEC6, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

23. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_KM212169 (Escherichia coli strain 8ZG6D plasmid pSD11, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

24. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_KM580532 (Escherichia coli strain GXEC3 plasmid pGXEC3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

25. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP045764 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

26. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

27. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP048333 (Escherichia coli strain 10 plasmid p010_C, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

28. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

29. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP029728 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed8, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

30. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP035775 (Klebsiella pneumoniae strain R46 plasmid pR46-42, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

31. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_013718 (Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

32. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP019016 (Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

33. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

34. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_LT985318 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

35. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP023373 (Escherichia coli strain 1283 plasmid p31, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

36. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP023905 (Escherichia coli strain FDAARGOS_433 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

37. spacer 3.19|1706154|24|LS483393|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

38. spacer 3.19|1706154|24|LS483393|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

39. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

40. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_021841 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

41. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP040594 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

42. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP029976 (Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

43. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP021735 (Escherichia coli strain AR_0114 plasmid unitig_4, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

44. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_CP026942 (Escherichia coli strain CFS3313 plasmid pCFS3313-3, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

45. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NC_021079 (Klebsiella pneumoniae strain Kp002 plasmid pJEG012, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

46. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_LT985276 (Escherichia coli strain 707 plasmid RCS67_p, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

47. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_KY865319 (Escherichia coli strain SY3018 plasmid pEC14cfr, complete sequence) position: , mismatch: 3, identity: 0.875

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagtaaaaatattagaaatta	Protospacer
******.*** ************

48. spacer 3.18|1705321|24|LS483393|PILER-CR matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

ggagataaatatcaaagattacta	CRISPR spacer
ttcgataaatatcaaagattatta	Protospacer
   ******************.**

49. spacer 3.18|1705321|24|LS483393|PILER-CR matches to MN694034 (Marine virus AFVG_250M807, complete genome) position: , mismatch: 4, identity: 0.833

ggagataaatatcaaagattacta	CRISPR spacer
caagataaatatcaaagattagaa	Protospacer
 .*******************  *

50. spacer 3.19|1706154|24|LS483393|PILER-CR matches to NZ_AP017969 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence) position: , mismatch: 4, identity: 0.833

gaagagcaaatatattagaaattc	CRISPR spacer
gaagagcaaatatattataaaaga	Protospacer
***************** ***

51. spacer 3.19|1706154|24|LS483393|PILER-CR matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 4, identity: 0.833

gaagagcaaatatattagaaattc	CRISPR spacer
caagagcaaatataatagaaatat	Protospacer
 ************* ******* .

52. spacer 3.19|1706154|24|LS483393|PILER-CR matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 4, identity: 0.833

gaagagcaaatatattagaaattc	CRISPR spacer
caagagcaaatataatagaaatat	Protospacer
 ************* ******* .

53. spacer 3.3|1705363|29|LS483393|CRISPRCasFinder,CRT matches to NC_019772 (Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence) position: , mismatch: 5, identity: 0.828

taccattagaagcagctaataaagtacca	CRISPR spacer
gacgattagtagcagctaataaagtagcc	Protospacer
 ** ***** **************** *

54. spacer 3.3|1705363|29|LS483393|CRISPRCasFinder,CRT matches to MN693034 (Marine virus AFVG_117M74, complete genome) position: , mismatch: 5, identity: 0.828

taccattagaagcagctaataaagtacca	CRISPR spacer
taccataagaagcagctaataaaagatta	Protospacer
****** ****************. *..*

55. spacer 3.8|1705691|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 5, identity: 0.833

cactaaagatctattagagttagtggaatt	CRISPR spacer
cgcaaaagatttattaaagttagtggaaat	Protospacer
*.* ******.*****.*********** *

56. spacer 3.8|1705691|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

cactaaagatctattagagttagtggaatt	CRISPR spacer
cgcaaaagatttattaaagttagtggaaat	Protospacer
*.* ******.*****.*********** *

57. spacer 3.8|1705691|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 5, identity: 0.833

cactaaagatctattagagttagtggaatt	CRISPR spacer
cgcaaaagatttattaaagttagtggaaat	Protospacer
*.* ******.*****.*********** *

58. spacer 3.8|1705691|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 5, identity: 0.833

cactaaagatctattagagttagtggaatt	CRISPR spacer
cgcaaaagatttattaaagttagtggaaat	Protospacer
*.* ******.*****.*********** *

59. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_027331 (Citrobacter phage Moon, complete genome) position: , mismatch: 5, identity: 0.833

tagaagagcaaatatattagaaattccaag	CRISPR spacer
tatagaagcagatatcttagaaattccaag	Protospacer
** *..****.**** **************

60. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to MG250484 (Citrobacter phage CF1 ERZ-2017, complete genome) position: , mismatch: 5, identity: 0.833

tagaagagcaaatatattagaaattccaag	CRISPR spacer
tatagaagcagatatcttagaaattccaag	Protospacer
** *..****.**** **************

61. spacer 3.1|1705232|29|LS483393|CRISPRCasFinder,CRT matches to KC465899 (Pelagibacter phage HTVC008M, complete genome) position: , mismatch: 6, identity: 0.793

tatactgtaaatggtggtaagtttacatt	CRISPR spacer
gatactgttaaaggtggtaagtttaaaaa	Protospacer
 ******* ** ************* *

62. spacer 3.1|1705232|29|LS483393|CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 6, identity: 0.793

tatactgtaaatggtggtaagtttacatt	CRISPR spacer
gaaaatgtaaatggaggtaagtttacctc	Protospacer
 * * ********* *********** *.

63. spacer 3.3|1705363|29|LS483393|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 6, identity: 0.793

taccattagaagcagctaataaagtacca	CRISPR spacer
taccattagaagaagctaaaaaaatttga	Protospacer
************ ****** ***.* . *

64. spacer 3.3|1705363|29|LS483393|CRISPRCasFinder,CRT matches to MN694669 (Marine virus AFVG_250M354, complete genome) position: , mismatch: 6, identity: 0.793

taccattagaagcagctaataaagtacca	CRISPR spacer
taccataagaagcagctaatagaaaagct	Protospacer
****** **************.*. * *

65. spacer 3.3|1705363|29|LS483393|CRISPRCasFinder,CRT matches to MN693186 (Marine virus AFVG_25M505, complete genome) position: , mismatch: 6, identity: 0.793

taccattagaagcagctaataaagtacca	CRISPR spacer
tggtaatagaagaagctaataaagtaaca	Protospacer
*. .* ****** ************* **

66. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 6, identity: 0.8

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
aaactgtagtaaaaaaaattatattagata	Protospacer
***.*********.*********  *..**

67. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014830 (Geminocystis sp. NIES-3709 plasmid pGM3709_09, complete sequence) position: , mismatch: 6, identity: 0.8

aaattgtagtaaagaaaattataaa-aagta	CRISPR spacer
caattatagtaaagaaaatgataagttagt-	Protospacer
 ****.************* ****.  ***

68. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014831 (Geminocystis sp. NIES-3709 plasmid pGM3709_10, complete sequence) position: , mismatch: 6, identity: 0.8

aaattgtagtaaagaaaattataaa-aagta	CRISPR spacer
caattatagtaaagaaaatgataagttagt-	Protospacer
 ****.************* ****.  ***

69. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to MN038178 (Bacillus phage Beyonphe, complete genome) position: , mismatch: 6, identity: 0.8

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
aaaactttctaaagaaaattataaaaaata	Protospacer
*** . *  ******************.**

70. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_031100 (Bacillus phage Phrodo, complete genome) position: , mismatch: 6, identity: 0.8

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
aaaactttctaaagaaaattataaaaaata	Protospacer
*** . *  ******************.**

71. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to KF669647 (Bacillus phage BigBertha, complete genome) position: , mismatch: 6, identity: 0.8

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
aaaactttctaaagaaaattataaaaaata	Protospacer
*** . *  ******************.**

72. spacer 3.9|1705757|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043057 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence) position: , mismatch: 6, identity: 0.8

gtgatatcccattctaggaaag---gttttaaa	CRISPR spacer
ctgctatcccattctaggaaagtatgattt---	Protospacer
 ** ******************   * ***

73. spacer 3.9|1705757|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to MN732896 (Elizabethkingia phage TCUEAP1, complete genome) position: , mismatch: 6, identity: 0.8

gtgatatcccattctaggaaaggttttaaa---	CRISPR spacer
gtgatattccattctaggaaaa---ttacatcc	Protospacer
*******.*************.   *** *

74. spacer 3.13|1706021|29|LS483393|CRISPRCasFinder,CRT matches to MN693407 (Marine virus AFVG_25M242, complete genome) position: , mismatch: 6, identity: 0.793

cctaaagttggtaagtatgttag-attgca	CRISPR spacer
tctaaaggtggtaagtttgttagaagtgt-	Protospacer
.****** ******** ****** * **.

75. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to AP019561 (Staphylococcus phage SP197 DNA, complete genome) position: , mismatch: 6, identity: 0.8

atgagtaatattaaagttgatttagacaag	CRISPR spacer
atgggtaatcttaaagttgattttttgaag	Protospacer
***.***** *************    ***

76. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to MT423824 (Staphylococcus virus pSp_SNUABM-S, complete genome) position: , mismatch: 6, identity: 0.8

atgagtaatattaaagttgatttagacaag	CRISPR spacer
atgggtaatcttaaagttgattttttgaag	Protospacer
***.***** *************    ***

77. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to MT423823 (Staphylococcus virus pSp_SNUABM-J, complete genome) position: , mismatch: 6, identity: 0.8

atgagtaatattaaagttgatttagacaag	CRISPR spacer
atgggtaatcttaaagttgattttttgaag	Protospacer
***.***** *************    ***

78. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to AP019560 (Staphylococcus phage SP120 DNA, complete genome) position: , mismatch: 6, identity: 0.8

atgagtaatattaaagttgatttagacaag	CRISPR spacer
atgggtaatcttaaagttgattttttgaag	Protospacer
***.***** *************    ***

79. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to AP019562 (Staphylococcus phage SP276 DNA, complete genome) position: , mismatch: 6, identity: 0.8

atgagtaatattaaagttgatttagacaag	CRISPR spacer
atgggtaatcttaaagttgattttttgaag	Protospacer
***.***** *************    ***

80. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to KJ019152 (Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome) position: , mismatch: 6, identity: 0.8

tagaagagcaaatatattagaaattccaag----	CRISPR spacer
tagaagagcaaatatactaaaaa----aagatgc	Protospacer
****************.**.***    ***

81. spacer 3.1|1705232|29|LS483393|CRISPRCasFinder,CRT matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 7, identity: 0.759

tatactgtaaatggtggtaagtttacatt	CRISPR spacer
ttcactgttaatggtggtaagttaactaa	Protospacer
* .***** ************** **

82. spacer 3.1|1705232|29|LS483393|CRISPRCasFinder,CRT matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 7, identity: 0.759

tatactgtaaatggtggtaagtttacatt	CRISPR spacer
ttcactgttaatggtggtaagttaactaa	Protospacer
* .***** ************** **

83. spacer 3.3|1705363|29|LS483393|CRISPRCasFinder,CRT matches to MN693371 (Marine virus AFVG_25M511, complete genome) position: , mismatch: 7, identity: 0.759

taccattagaagcagctaataaagtacca	CRISPR spacer
tggttatagaagaagctaataaagtaaca	Protospacer
*. .  ****** ************* **

84. spacer 3.5|1705494|29|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041954 (Klebsiella pneumoniae strain KP2 plasmid pKP2_8, complete sequence) position: , mismatch: 7, identity: 0.759

ttagagcaatcattgttttaccttcgata	CRISPR spacer
caagagcaagcattgttttaacttctaat	Protospacer
. ******* ********** **** *

85. spacer 3.5|1705494|29|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032306 (Salmonella enterica subsp. enterica serovar Braenderup strain FORC93 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

ttagagcaatcattgttttaccttcgata	CRISPR spacer
caagagcaagcattgttttaacttctaat	Protospacer
. ******* ********** **** *

86. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.767

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
tttatagagtaaagaaaattataaaaaata	Protospacer
    *. ********************.**

87. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_010405 (Paulownia witches'-broom phytoplasma plasmid pPaWBNy-1, complete sequence) position: , mismatch: 7, identity: 0.767

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
tgattttagtaaagaaaattataatgataa	Protospacer
 .*** ****************** .*  *

88. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 7, identity: 0.767

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
agagctaagtaaagaaaattataaagagtt	Protospacer
*.* .  ******************.***

89. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028863 (Borreliella garinii strain 20047 plasmid lp28-4, complete sequence) position: , mismatch: 7, identity: 0.767

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
ggaatttaatgaagaaaattataaaaagtc	Protospacer
..* * **.*.******************

90. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018336 (Clostridium kluyveri strain JZZ plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
tactgatagtgaggaaaattataaaaagtt	Protospacer
 * * .****.*.****************

91. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_013164 (Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence) position: , mismatch: 7, identity: 0.767

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
atctgaaagtcaagaaatttataaaaagta	Protospacer
*  * . *** ****** ************

92. spacer 3.12|1705955|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 7, identity: 0.767

gagctagatattactggtactggtgtttgg	CRISPR spacer
gcagcagatattactgctaatggtgtttcg	Protospacer
* . .*********** ** ******** *

93. spacer 3.12|1705955|30|LS483393|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 7, identity: 0.767

gagctagatattactggtactggtgtttgg	CRISPR spacer
gcagcagatattactgctaatggtgtttcg	Protospacer
* . .*********** ** ******** *

94. spacer 3.12|1705955|30|LS483393|CRISPRCasFinder,CRT matches to GU071094 (Synechococcus phage S-SM1, complete genome) position: , mismatch: 7, identity: 0.767

gagctagatattactggtactggtgtttgg	CRISPR spacer
gcacaagatattactgcttctggtgttttt	Protospacer
* .* *********** * *********

95. spacer 3.13|1706021|29|LS483393|CRISPRCasFinder,CRT matches to MK288021 (Bacillus phage pW2, complete genome) position: , mismatch: 7, identity: 0.759

cctaaagttggtaagtatgttagattgca	CRISPR spacer
attaaagttggtaagtttgctagattcac	Protospacer
 .************** **.******

96. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to MK448692 (Streptococcus phage Javan173, complete genome) position: , mismatch: 7, identity: 0.767

atgagtaatattaaagttgatttagacaag	CRISPR spacer
tttgctaatcttaaagttgatttagccaat	Protospacer
 * . **** *************** ***

97. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_AP017969 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
tagaagagcaaatatattataaaagaaata	Protospacer
******************* ***    * .

98. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_022105 (Escherichia coli strain ECSAM7 plasmid pSAM7, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

99. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_KM580533 (Escherichia coli strain GXEC6 plasmid pGXEC6, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

100. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_KM212169 (Escherichia coli strain 8ZG6D plasmid pSD11, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

101. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_KM580532 (Escherichia coli strain GXEC3 plasmid pGXEC3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

102. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP045764 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid p2CFSAN000318, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

103. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

104. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP048333 (Escherichia coli strain 10 plasmid p010_C, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

105. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

106. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP029728 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed8, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

107. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP035775 (Klebsiella pneumoniae strain R46 plasmid pR46-42, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

108. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_013718 (Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

109. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP019016 (Escherichia coli strain Ecol_244 plasmid pEC244_4, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

110. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

111. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_LT985318 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_p) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

112. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP023373 (Escherichia coli strain 1283 plasmid p31, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

113. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP023905 (Escherichia coli strain FDAARGOS_433 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

114. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

115. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

116. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

117. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_021841 (Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 plasmid pSEEH1578_02, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

118. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP040594 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

119. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP029976 (Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

120. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP021735 (Escherichia coli strain AR_0114 plasmid unitig_4, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

121. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP026942 (Escherichia coli strain CFS3313 plasmid pCFS3313-3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

122. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_021079 (Klebsiella pneumoniae strain Kp002 plasmid pJEG012, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

123. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_LT985276 (Escherichia coli strain 707 plasmid RCS67_p, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

124. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_KY865319 (Escherichia coli strain SY3018 plasmid pEC14cfr, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

125. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_KY652381 (Escherichia coli strain WCHEC050622 plasmid pIncX4_WCHEC1622, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

126. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP011290 (Salmonella enterica subsp. diarizonae strain 11-01853 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

127. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP026728 (Escherichia coli strain 266917_2 plasmid p266917_2_05, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

128. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP016008 (Escherichia coli strain NGF1 plasmid pNGF1_pCROD2_like, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

129. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP035754 (Escherichia coli E110019 plasmid pE110019_33, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

130. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP044138 (Escherichia coli O157 strain AR-0430 plasmid pAR-0430-2, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

131. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP010880 (Escherichia coli strain MNCRE44 plasmid pMNCRE44_4, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

132. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP031616 (Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

133. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP024861 (Escherichia coli strain AR_0014 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

134. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP040725 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

135. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP018950 (Escherichia coli strain Ecol_276 plasmid pEC276_3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

136. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_019128 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_34, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

137. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_019130 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_34, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

138. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_LS992170 (Escherichia coli isolate Escherichia coli str. TO60 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

139. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP033879 (Escherichia coli strain 50579417 plasmid p50579417_5, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

140. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP033849 (Escherichia coli strain FDAARGOS_497 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

141. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NC_010657 (Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

142. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to CP052800 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-2, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

143. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to NZ_CP023829 (Escherichia coli strain 4/4 plasmid p4_4.3, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

144. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to CP052790 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN19S0552-2, complete sequence) position: , mismatch: 7, identity: 0.767

tagaagagcaaatatattagaaattccaag	CRISPR spacer
atgaagagtaaaaatattagaaattaaaaa	Protospacer
  ******.*** ************  **.

145. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to MN694034 (Marine virus AFVG_250M807, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
caagataaatatcaaagattagaaaatgta	Protospacer
 .*******************  *** ..

146. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to MG770897 (Staphylococcus phage SH-St 15644, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
attggcaaaaatctaagattactaaagacg	Protospacer
.  *..*** *** ***************

147. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to MT366568 (Staphylococcus phage R4, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
attggcaaaaatctaagattactaaagacg	Protospacer
.  *..*** *** ***************

148. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to AP012341 (Staphylococcus phage phi7401PVL DNA, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
attggcaaaaatctaagattactaaagacg	Protospacer
.  *..*** *** ***************

149. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to KF598856 (Staphylococcus phage YMC/09/04/R1988, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
attggcaaaaatctaagattactaaagacg	Protospacer
.  *..*** *** ***************

150. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to MG029515 (Staphylococcus phage phiSa2wa_st80, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
attggcaaaaatctaagattactaaagacg	Protospacer
.  *..*** *** ***************

151. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to JX174275 (Staphylococcus phage LH1, complete genome) position: , mismatch: 8, identity: 0.733

ggagataaatatcaaagattactaaagact	CRISPR spacer
attggcaaaaatctaagattactaaagacg	Protospacer
.  *..*** *** ***************

152. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY086101 (Rice orange leaf phytoplasma strain ROL1 plasmid pROL1, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
cgattttagtaaagaaaattataatgatag	Protospacer
 .*** ****************** .*  .

153. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_019533 (Wheat blue dwarf phytoplasma plasmid pWBD2, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
tgattttagtaaagaaaattataatgatag	Protospacer
 .*** ****************** .*  .

154. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_019535 (Wheat blue dwarf phytoplasma plasmid pWBD1, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
tgattttagtaaagaaaattataatgatag	Protospacer
 .*** ****************** .*  .

155. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018869 (Sporosarcina sp. P37 plasmid pSporoP37, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
gcagtggagtaaagcaaattataaaaacgg	Protospacer
. * ** ******* ************  .

156. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
taattgtagtaaagacaattattctagcga	Protospacer
 ************** ******   *.  *

157. spacer 3.7|1705625|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to KT895374 (Bacillus phage vB_BpuM-BpSp, complete genome) position: , mismatch: 8, identity: 0.733

aaattgtagtaaagaaaattataaaaagta	CRISPR spacer
ttgttttaataaagaaaattataaaagtaa	Protospacer
  .** **.*****************.  *

158. spacer 3.8|1705691|30|LS483393|CRISPRCasFinder,CRT,PILER-CR matches to NC_004565 (Clostridium tetani E88 plasmid pE88, complete sequence) position: , mismatch: 8, identity: 0.733

cactaaagatctattagagttagtggaatt	CRISPR spacer
taaagcagatctattagagttagtagacat	Protospacer
.*  . ******************.**  *

159. spacer 3.12|1705955|30|LS483393|CRISPRCasFinder,CRT matches to MG198570 (Lake Baikal phage Baikal-20-5m-C28, complete genome) position: , mismatch: 8, identity: 0.733

gagctagatattactggtactggtgtttgg	CRISPR spacer
gtattagatagtactggtactgttgttact	Protospacer
* ..****** *********** ****

160. spacer 3.12|1705955|30|LS483393|CRISPRCasFinder,CRT matches to MG198570 (Lake Baikal phage Baikal-20-5m-C28, complete genome) position: , mismatch: 8, identity: 0.733

gagctagatattactggtactggtgtttgg	CRISPR spacer
gtattagatagtactggtactgttgttact	Protospacer
* ..****** *********** ****

161. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to MH552499 (Podoviridae sp. isolate ctcf755, complete genome) position: , mismatch: 8, identity: 0.733

tagaagagcaaatatattagaaattccaag	CRISPR spacer
agatatggcaaatagattagaaattgcaag	Protospacer
 .. * .******* ********** ****

162. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggagataaatatcaaagattactaaagact	CRISPR spacer
ttcgataaatatcaaagattattagcttat	Protospacer
   ******************.**.    *

163. spacer 3.12|1705955|30|LS483393|CRISPRCasFinder,CRT matches to KU594606 (Cyanophage S-RIM32 isolate RW_108_0702, complete genome) position: , mismatch: 9, identity: 0.7

gagctagatattactggtactggtgtttgg	CRISPR spacer
agattagatattactgttactggtggatct	Protospacer
....************ ********  *

164. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to MN693854 (Marine virus AFVG_250M929, complete genome) position: , mismatch: 9, identity: 0.7

atgagtaatattaaagttgatttagacaag	CRISPR spacer
ggatctaatattaaagtttatttagatact	Protospacer
. .  ************* *******.*

165. spacer 3.14|1706086|30|LS483393|CRISPRCasFinder,CRT matches to MN694256 (Marine virus AFVG_250M930, complete genome) position: , mismatch: 9, identity: 0.7

atgagtaatattaaagttgatttagacaag	CRISPR spacer
ggatctaatattaaagtttatttagatact	Protospacer
. .  ************* *******.*

166. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 9, identity: 0.7

tagaagagcaaatatattagaaattccaag	CRISPR spacer
cacaagagcaaatataatagaaatatatta	Protospacer
.* ************* ******* .   .

167. spacer 3.15|1706152|30|LS483393|CRISPRCasFinder,CRT matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 9, identity: 0.7

tagaagagcaaatatattagaaattccaag	CRISPR spacer
cacaagagcaaatataatagaaatatatta	Protospacer
.* ************* ******* .   .

168. spacer 3.2|1705297|30|LS483393|CRISPRCasFinder,CRT matches to NZ_LR134422 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 13) position: , mismatch: 10, identity: 0.667

ggagataaatatcaaagattactaaagact	CRISPR spacer
tttaggaaacatcaaagattactaaagtgc	Protospacer
   .. ***.*****************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

838641 : 851231

Synechococcus_phage(25.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG37971.1\|838641_839292_+	deoxyuridine 5`-triphosphate nucleotidohydrolase	A0A1B1P8C0	Bacillus_phage	2.9e-14	31.1
SQG37972.1\|839796_841107_+	thiamine biosynthesis protein ThiC	NA	NA	NA	NA
SQG37973.1\|841344_845145_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	4.7e-32	24.9
SQG37974.1\|845455_845935_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	A0A2P0VNU7	Tetraselmis_virus	2.6e-28	47.4
SQG37975.1\|845934_846642_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4SM18	Cyanophage	2.8e-47	43.8
SQG37976.1\|846663_848109_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.4e-56	33.0
SQG37977.1\|848109_849111_+	phosphoribosylaminoimidazole synthetase	A0A0E3FGG1	Synechococcus_phage	6.7e-71	49.0
SQG37978.1\|849098_849713_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.2e-24	38.3
SQG37979.1\|849725_851231_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.2e-66	47.2

DBSCAN-SWA_2

1106079 : 1147602

Clostridium_phage(83.33%)

lysis,terminase,capsid,portal,integrase,holin

attL 1098897:1098913|attR 1111679:1111695

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1098897:1098913	attL	NA	NA	NA	NA
SQG38224.1\|1106079_1107840_+	anaerobic ribonucleoside triphosphate reductase	D9ZNH0	Clostridium_phage	3.6e-221	62.9
SQG38226.1\|1107836_1108295_+	anaerobic ribonucleoside-triphosphate reductase activating protein NrdG	D9ZNH1	Clostridium_phage	2.9e-29	48.6
SQG38227.1\|1108489_1109212_+	Uncharacterised protein	NA	NA	NA	NA
SQG38228.1\|1109416_1109635_-	Uncharacterised protein	NA	NA	NA	NA
SQG38230.1\|1109881_1110946_-\|integrase	phage integrase site specific recombinase	B3GVW7	Streptococcus_phage	1.6e-33	33.1
SQG38232.1\|1111038_1111503_-	phage protein	A0A0A7RVV2	Clostridium_phage	7.0e-39	51.3
SQG38234.1\|1111518_1112022_-	Cro/CI family transcriptional regulator	A0A0A7RTR3	Clostridium_phage	1.9e-29	52.3
1111679:1111695	attR	NA	NA	NA	NA
SQG38235.1\|1112173_1112410_+	helix-turn-helix domain-containing protein	B6SBW9	Clostridium_virus	5.7e-13	57.9
SQG38237.1\|1112421_1113153_+	BRO domain-containing protein	A0A288WG93	Bacillus_phage	3.9e-20	33.2
SQG38238.1\|1113178_1113433_+	Uncharacterised protein	NA	NA	NA	NA
SQG38240.1\|1113401_1114073_-	Uncharacterised protein	NA	NA	NA	NA
SQG38242.1\|1114249_1114552_+	Uncharacterised protein	NA	NA	NA	NA
SQG38244.1\|1114553_1114733_+	Uncharacterised protein	M9Q2G4	Clostridium_phage	9.3e-08	50.0
SQG38246.1\|1114743_1114926_+	Uncharacterised protein	I2E8Z1	Clostridium_phage	2.7e-07	48.3
SQG38248.1\|1114922_1115030_+	Uncharacterised protein	NA	NA	NA	NA
SQG38249.1\|1115222_1115408_+	Uncharacterised protein	NA	NA	NA	NA
SQG38250.1\|1115407_1116319_+	phage-type endonuclease	A0A0A7RWR9	Clostridium_phage	4.5e-106	64.9
SQG38252.1\|1116320_1117190_+	RecT family protein	A0A0A7RW37	Clostridium_phage	5.4e-101	68.3
SQG38255.1\|1117207_1117921_+	phage protein	A0A0A7RTY6	Clostridium_phage	2.0e-32	60.0
SQG38256.1\|1117921_1118017_+	Uncharacterised protein	NA	NA	NA	NA
SQG38258.1\|1118250_1118745_+	Uncharacterised protein	NA	NA	NA	NA
SQG38260.1\|1119069_1119543_+	probable sigma factor	Q0SPJ6	Clostridium_phage	1.4e-23	41.4
SQG38262.1\|1120012_1120783_+	Uncharacterised protein	NA	NA	NA	NA
SQG38263.1\|1120846_1121713_+\|terminase	terminase small subunit	E5DV49	Deep-sea_thermophilic_phage	5.8e-63	46.5
SQG38264.1\|1121705_1123073_+\|terminase	phage terminase, large subunit	M9Q2I1	Clostridium_phage	2.0e-267	97.8
SQG38265.1\|1123075_1123285_+	Uncharacterised protein	NA	NA	NA	NA
SQG38266.1\|1123286_1124813_+\|portal	Phage portal protein, SPP1 Gp6	M9Q246	Clostridium_phage	6.4e-198	66.1
SQG38267.1\|1124796_1126035_+\|capsid	phage minor capsid protein	M9Q2F2	Clostridium_phage	5.7e-221	92.7
SQG38268.1\|1126049_1126154_+	Uncharacterised protein	NA	NA	NA	NA
SQG38269.1\|1126157_1126385_+	Uncharacterised protein	NA	NA	NA	NA
SQG38270.1\|1126403_1126688_+	phage protein	A0A0C5K6K1	Enterococcus_phage	8.6e-24	57.6
SQG38271.1\|1126859_1127819_+	Uncharacterised protein	NA	NA	NA	NA
SQG38272.1\|1127924_1128530_+	minor structural GP20 protein	NA	NA	NA	NA
SQG38274.1\|1128552_1129515_+	Uncharacterised protein	A0A1J0MCK3	Streptomyces_phage	4.6e-85	53.9
SQG38276.1\|1129528_1129813_+	Uncharacterised protein	NA	NA	NA	NA
SQG38277.1\|1129814_1130177_+	Uncharacterised protein	M9Q2K9	Clostridium_phage	1.6e-54	90.0
SQG38279.1\|1130179_1130506_+	Uncharacterised protein	M9Q2I3	Clostridium_phage	7.8e-45	75.9
SQG38281.1\|1130505_1130889_+	Uncharacterised protein	M9Q249	Clostridium_phage	1.2e-60	92.1
SQG38282.1\|1130888_1131275_+	Uncharacterised protein	M9Q2F6	Clostridium_phage	4.7e-65	93.8
SQG38283.1\|1131284_1131737_+	Uncharacterised protein	M9Q1I1	Clostridium_phage	3.8e-74	92.3
SQG38284.1\|1131752_1132121_+	Uncharacterised protein	M9Q2L0	Clostridium_phage	9.1e-42	74.6
SQG38285.1\|1132110_1132443_+	Bacteriophage Gp15 protein	M9Q2I4	Clostridium_phage	1.6e-53	95.5
SQG38286.1\|1132483_1135696_+	TMP repeat family	M9Q251	Clostridium_phage	0.0e+00	89.1
SQG38288.1\|1135699_1136053_+	Lj965 prophage protein	M9Q2F8	Clostridium_phage	7.3e-57	95.5
SQG38289.1\|1136076_1136370_+	Uncharacterised protein	Q0SPL4	Clostridium_phage	1.8e-40	91.8
SQG38290.1\|1136431_1136812_+	Uncharacterised protein	M9Q2L1	Clostridium_phage	2.9e-59	93.7
SQG38291.1\|1136847_1141932_+	KID repeat-containing protein	M9Q2I5	Clostridium_phage	0.0e+00	74.1
SQG38292.1\|1141950_1142199_+	Uncharacterised protein	Q0SPG3	Clostridium_phage	1.6e-37	93.9
SQG38293.1\|1142212_1142629_+\|holin,lysis	toxin secretion/phage lysis holin	M9Q253	Clostridium_phage	1.5e-69	97.1
SQG38295.1\|1142669_1143086_+	Uncharacterised protein	M9Q2G0	Clostridium_phage	1.9e-59	92.0
SQG38296.1\|1143171_1144200_+	glycosyl hydrolase	Q0SPG7	Clostridium_phage	1.8e-188	93.9
SQG38297.1\|1144700_1145246_+	comF family protein	NA	NA	NA	NA
SQG38298.1\|1145256_1146222_+	DNA uptake protein	NA	NA	NA	NA
SQG38299.1\|1146218_1146731_+	phosphatase	NA	NA	NA	NA
SQG38300.1\|1146831_1147602_+	putative modification methylase dpniia	Q0SPG6	Clostridium_phage	1.6e-112	75.7

DBSCAN-SWA_3

1158997 : 1216634

Bacillus_phage(46.15%)

transposase,integrase,protease,tRNA

attL 1189791:1189807|attR 1219573:1219589

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG38319.1\|1158997_1159819_-\|protease	CAAX amino terminal protease	NA	NA	NA	NA
SQG38321.1\|1160781_1161174_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQG38322.1\|1161502_1162648_+	Uncharacterised protein	NA	NA	NA	NA
SQG38324.1\|1162814_1163126_+	Uncharacterised protein	NA	NA	NA	NA
SQG38326.1\|1163409_1165173_+	McrB domain-containing protein	K4I1H4	Acidithiobacillus_phage	2.9e-45	36.8
SQG38328.1\|1165176_1166868_+	McrBC 5-methylcytosine restriction system component	NA	NA	NA	NA
SQG38329.1\|1166893_1167277_+	SdpI/YhfL protein family	NA	NA	NA	NA
SQG38331.1\|1167367_1167925_-	putative flavoredoxin	NA	NA	NA	NA
SQG38332.1\|1167968_1168358_-	Uncharacterised protein	NA	NA	NA	NA
SQG38334.1\|1168660_1169437_+	lipoprotein	NA	NA	NA	NA
SQG38336.1\|1169816_1170620_-\|protease	CAAX amino terminal protease	NA	NA	NA	NA
SQG38338.1\|1170917_1171058_+	Uncharacterized conserved protein	NA	NA	NA	NA
SQG38339.1\|1171321_1171513_+	Uncharacterised protein	NA	NA	NA	NA
SQG38341.1\|1171497_1171722_+	Uncharacterised protein	NA	NA	NA	NA
SQG38342.1\|1172010_1173237_-	amidohydrolase	NA	NA	NA	NA
SQG38343.1\|1173645_1174533_+	Uncharacterised protein	NA	NA	NA	NA
SQG38344.1\|1174861_1175815_-\|tRNA	methionyl-tRNA formyltransferase	NA	NA	NA	NA
SQG38345.1\|1175994_1176822_-	DUF218 domain	NA	NA	NA	NA
SQG38347.1\|1176916_1177288_-	Uncharacterised protein	NA	NA	NA	NA
SQG38349.1\|1177448_1178639_-\|transposase	IS1136 transposase	Q331V1	Clostridium_botulinum_C_phage	2.3e-166	78.7
SQG38350.1\|1179443_1179776_-	Domain of uncharacterised function (DUF3784)	NA	NA	NA	NA
SQG38352.1\|1180096_1182220_-	ferrous iron transport protein B	NA	NA	NA	NA
SQG38354.1\|1182237_1182456_-	ferrous iron transport protein A	NA	NA	NA	NA
SQG38356.1\|1182629_1182992_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
SQG38357.1\|1183612_1184149_+	Uncharacterised protein	NA	NA	NA	NA
SQG38359.1\|1184335_1187236_+	helicase	Q5YA94	Bacillus_phage	3.2e-25	29.0
SQG38361.1\|1187275_1188361_+	Uncharacterised protein	NA	NA	NA	NA
SQG38363.1\|1188756_1190802_+	SMC domain-containing protein	NA	NA	NA	NA
1189791:1189807	attL	NA	NA	NA	NA
SQG38364.1\|1190821_1192720_+	ATP-dependent DNA helicase	A7KV33	Bacillus_phage	7.3e-26	25.6
SQG38366.1\|1192798_1193242_-	putative Zn peptidase	Q0H245	Geobacillus_phage	2.5e-22	38.4
SQG38367.1\|1193358_1193901_-	DNA-binding protein	Q786F1	Bacillus_phage	3.6e-10	32.1
SQG38368.1\|1194857_1196786_+	DNA polymerase I family protein	S5M8J1	Bacillus_phage	1.3e-43	24.3
SQG38369.1\|1197054_1200162_+	phage/plasmid primase, P4 family, C-terminal domain protein	A0A2H4JBE3	uncultured_Caudovirales_phage	5.9e-41	32.2
SQG38370.1\|1200681_1201275_+	RNA polymerase sigma factor	NA	NA	NA	NA
SQG38371.1\|1201498_1202185_-	CDGSH-type zinc finger protein	NA	NA	NA	NA
SQG38373.1\|1202497_1203412_+	Uncharacterised protein	NA	NA	NA	NA
SQG38375.1\|1203946_1204177_+	Uncharacterised protein	NA	NA	NA	NA
SQG38377.1\|1204537_1204768_+	Uncharacterised protein	NA	NA	NA	NA
SQG38378.1\|1205091_1206408_+	acetyltransferase	NA	NA	NA	NA
SQG38380.1\|1206850_1207162_-	Uncharacterised protein	NA	NA	NA	NA
SQG38381.1\|1207455_1207956_+	transposon, resolvase	Q331Z3	Clostridium_botulinum_C_phage	4.4e-47	56.6
SQG38382.1\|1208056_1209172_+\|transposase	transposase, IS605 OrfB family, central region	D2XQ03	Bacillus_virus	7.3e-143	67.7
SQG38383.1\|1209743_1210139_-	mutator mutT protein	A0A248SJN0	Salicola_phage	1.7e-06	30.5
SQG38385.1\|1210324_1211470_+	chromosome segregation protein SMC	NA	NA	NA	NA
SQG38386.1\|1211485_1213504_+	Uncharacterised protein	NA	NA	NA	NA
SQG38388.1\|1213487_1215365_+	Protein of uncharacterised function (DUF524)	NA	NA	NA	NA
SQG38390.1\|1215904_1216408_-\|integrase	integrase catalytic subunit	A0A1P8CWQ3	Bacillus_phage	2.3e-48	62.1
SQG38391.1\|1216394_1216634_-\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	5.7e-13	48.7
1219573:1219589	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1883882 : 1911591

Moraxella_phage(28.57%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG39427.1\|1883882_1885046_-\|transposase	IS605 family transposase OrfB	Q331V1	Clostridium_botulinum_C_phage	1.2e-167	76.6
SQG39429.1\|1885748_1886540_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
SQG39431.1\|1886809_1887136_-	Uncharacterised protein	NA	NA	NA	NA
SQG39433.1\|1887620_1888562_+	Uncharacterised protein	NA	NA	NA	NA
SQG39436.1\|1888599_1889469_-	methionine aminopeptidase	NA	NA	NA	NA
SQG39438.1\|1889658_1889760_-	Uncharacterised protein	NA	NA	NA	NA
SQG39441.1\|1889816_1890413_-	zinc dependent phospholipase C	NA	NA	NA	NA
SQG39443.1\|1890514_1891438_+	Uncharacterised protein	NA	NA	NA	NA
SQG39445.1\|1891577_1892147_-	Uncharacterised protein	NA	NA	NA	NA
SQG39447.1\|1892232_1892490_-	Uncharacterised protein	NA	NA	NA	NA
SQG39450.1\|1892511_1892727_-	Uncharacterised protein	NA	NA	NA	NA
SQG39452.1\|1892762_1893245_-	Uncharacterised protein	NA	NA	NA	NA
SQG39454.1\|1893461_1894055_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
SQG39456.1\|1894054_1896385_-\|protease	ATP-dependent protease La	A0A0R6PGP8	Moraxella_phage	6.1e-176	45.1
SQG39458.1\|1896506_1898219_-\|protease	Lon-like ATP-dependent protease	A0A0R6PGP8	Moraxella_phage	3.1e-23	27.4
SQG39460.1\|1898329_1899637_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.0e-140	58.4
SQG39462.1\|1899676_1900261_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.2e-53	54.9
SQG39463.1\|1900451_1901738_-	trigger factor	NA	NA	NA	NA
SQG39464.1\|1901864_1902653_-	AP endonuclease	NA	NA	NA	NA
SQG39465.1\|1902857_1904444_+	ATP-dependent RNA helicase	A0A1V0SBR7	Catovirus	2.4e-67	36.6
SQG39466.1\|1904482_1904746_-	Uncharacterised protein	NA	NA	NA	NA
SQG39468.1\|1904939_1905647_+	purine nucleoside phosphorylase	NA	NA	NA	NA
SQG39470.1\|1905701_1906976_-	membrane-associated protein	NA	NA	NA	NA
SQG39472.1\|1906986_1907331_-	Uncharacterised protein	NA	NA	NA	NA
SQG39474.1\|1907514_1908423_-	DNA polymerase III subunit epsilon	A0A2I6PEZ7	Staphylococcus_phage	1.2e-23	28.9
SQG39476.1\|1908669_1911591_-\|protease	zinc metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_5

2002370 : 2015627

Clostridium_phage(30.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG39634.1\|2002370_2003408_-	PP-loop family protein	A0A0U2S5Z2	Escherichia_phage	5.4e-31	36.0
SQG39635.1\|2003608_2003878_+	ACT domain-containing protein	NA	NA	NA	NA
SQG39637.1\|2003894_2005247_+	Uncharacterized conserved protein	NA	NA	NA	NA
SQG39639.1\|2005458_2005962_-	citrulline cluster-linked gene	E7DN70	Pneumococcus_phage	1.1e-13	37.2
SQG39641.1\|2006286_2007162_-	metallo-beta-lactamase family protein	Q332C0	Clostridium_botulinum_C_phage	1.1e-64	50.2
SQG39643.1\|2007332_2008655_-	sensor histidine kinase VirS	X5JAC0	Clostridium_phage	3.6e-72	37.8
SQG39645.1\|2008648_2009359_-	DNA-binding response regulator, LytTr family	A0A2R2ZGH8	Clostridioides_phage	3.3e-32	31.8
SQG39647.1\|2009497_2010100_-	N-acetylmuramoyl-L-alanine amidase	Q8SBN4	Clostridium_phage	6.6e-66	62.3
SQG39648.1\|2010157_2010511_-	N-acetylmuramoyl-L-alanine amidase	Q8SBN4	Clostridium_phage	1.1e-36	62.4
SQG39649.1\|2010607_2010895_-	uncharacterized protein, MTH1187 family	NA	NA	NA	NA
SQG39650.1\|2011118_2012132_-	3D/G5 domain-containing protein	A0A143FMI2	Bacillus_phage	3.5e-19	52.0
SQG39651.1\|2012557_2013856_-	uracil transporter	Q9KX94	Enterobacteria_phage	3.6e-69	39.3
SQG39653.1\|2014043_2015627_+	ABC transporter	A0A1V0SGN0	Hokovirus	8.5e-44	25.6

DBSCAN-SWA_6

2792069 : 2839608

Bacillus_phage(44.44%)

integrase,protease,coat

attL 2828132:2828148|attR 2839785:2839801

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG40993.1\|2792069_2793074_-\|coat	spore coat protein CotS	NA	NA	NA	NA
SQG40995.1\|2793182_2794310_+	mannosyltransferase	B6EFC4	Stygiolobus_rod-shaped_virus	1.4e-05	36.6
SQG40997.1\|2794492_2795521_-\|coat	spore coat protein	NA	NA	NA	NA
SQG40998.1\|2795536_2796220_-\|coat	spore coat protein	NA	NA	NA	NA
SQG41000.1\|2796227_2797235_-\|coat	spore coat protein	NA	NA	NA	NA
SQG41002.1\|2797363_2798509_+	mannosyltransferase	NA	NA	NA	NA
SQG41003.1\|2798742_2799273_-	heptaprenyl diphosphate synthase component I	NA	NA	NA	NA
SQG41005.1\|2799465_2799837_-	lipoprotein	NA	NA	NA	NA
SQG41007.1\|2799977_2800421_+	lipoprotein	NA	NA	NA	NA
SQG41008.1\|2800455_2801484_+	thiamin biosynthesis lipoprotein	NA	NA	NA	NA
SQG41010.1\|2801609_2802734_-	ethanolamine transporter	NA	NA	NA	NA
SQG41012.1\|2802896_2803226_-	PTS system protein	NA	NA	NA	NA
SQG41014.1\|2803458_2804838_-\|protease	serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	5.1e-21	29.0
SQG41016.1\|2804954_2805938_-	alpha/beta fold family hydrolase	NA	NA	NA	NA
SQG41019.1\|2805988_2807008_-	DNA-binding/iron metalloprotein/AP endonuclease	A0A0R6PI74	Moraxella_phage	1.9e-68	42.5
SQG41021.1\|2807149_2807782_+	endodeoxyribonuclease RusA	NA	NA	NA	NA
SQG41022.1\|2807754_2808351_+	acyl-CoA thioesterase	NA	NA	NA	NA
SQG41023.1\|2808487_2809450_-	oxidoreductase, pyridine nucleotide-disulfide family	NA	NA	NA	NA
SQG41024.1\|2809481_2810054_-	SirA-like protein	NA	NA	NA	NA
SQG41025.1\|2810235_2812125_+	sulfatase	W6LM83	Streptococcus_phage	1.1e-45	28.2
SQG41026.1\|2812264_2813788_-	lipoprotein	NA	NA	NA	NA
SQG41027.1\|2813804_2815220_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	6.0e-33	32.1
SQG41029.1\|2815399_2816083_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	7.9e-39	38.6
SQG41030.1\|2821850_2822420_-	chromate transporter	NA	NA	NA	NA
SQG41031.1\|2822406_2822958_-	chromate transporter	NA	NA	NA	NA
SQG41032.1\|2823385_2824099_+	lipoprotein	NA	NA	NA	NA
SQG41033.1\|2824430_2825882_-	aminoacyl-histidine dipeptidase	NA	NA	NA	NA
SQG41034.1\|2826277_2826886_-	Uncharacterised protein	NA	NA	NA	NA
SQG41035.1\|2826887_2828159_-	abortive infection protein	NA	NA	NA	NA
2828132:2828148	attL	NA	NA	NA	NA
SQG41036.1\|2828365_2829175_-	Uncharacterised protein	NA	NA	NA	NA
SQG41037.1\|2829186_2829585_-	Uncharacterised protein	NA	NA	NA	NA
SQG41038.1\|2829621_2830305_-	RNA polymerase sigma factor, sigma-70 family	NA	NA	NA	NA
SQG41039.1\|2830297_2830582_-	Uncharacterised protein	NA	NA	NA	NA
SQG41040.1\|2830568_2830790_-	Uncharacterised protein	NA	NA	NA	NA
SQG41041.1\|2830893_2831511_-	Uncharacterised protein	NA	NA	NA	NA
SQG41042.1\|2831516_2831645_-	Uncharacterised protein	NA	NA	NA	NA
SQG41043.1\|2831830_2832808_-	Uncharacterised protein	NA	NA	NA	NA
SQG41045.1\|2832929_2833073_-	Uncharacterised protein	NA	NA	NA	NA
SQG41046.1\|2833089_2833515_-	Uncharacterised protein	NA	NA	NA	NA
SQG41047.1\|2833780_2834593_-	putative DNA replication protein	A0A0H4TGD5	Bacillus_phage	1.6e-30	31.7
SQG41048.1\|2834558_2835677_-	phage protein	A0A218KCJ2	Bacillus_phage	3.3e-10	38.8
SQG41049.1\|2835698_2835800_-	Uncharacterised protein	NA	NA	NA	NA
SQG41050.1\|2835801_2836026_-	Uncharacterised protein	NA	NA	NA	NA
SQG41052.1\|2836235_2836430_-	phage transcriptional regulator	NA	NA	NA	NA
SQG41053.1\|2836556_2837234_+	dna-binding protein	NA	NA	NA	NA
SQG41054.1\|2838405_2839608_+\|integrase	integrase	A0A2R2ZGM9	Clostridioides_phage	1.9e-35	32.0
2839785:2839801	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483393

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection