CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483414	Streptococcus pyogenes strain NCTC13736 genome assembly, chromosome: 1	1 crisprs	DEDDh,cas3,csm6,DinG,csa3	1	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483414_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483414_2

913431-913531

Orphan

Consensus_repeat	Method
TATAATTAGACTATACCAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483414_2

>merge|LS483414|2|913431-913531|CRISPRCasFinder
TATAATTAGACTATACCAATTTTATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGGTATAATTAGACTATACCAATTAT

>LS483414|2|1|913431-913531|CRISPRCasFinder
TATAATTAGACTATACCAATTTT	ATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGG
TATAATTAGACTATACCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
LS483414.1\|SQG94972.1\|906863_909974_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LS483414.1\|SQG94977.1\|915592_915928_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|225380
LS483414.1\|SQG94981.1\|918535_919309_+\|protein-B	unknown	unknown	gnl\|CDD\|369335
LS483414.1\|SQG94978.1\|916034_916676_+\|histidine-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LS483414.1\|SQG94975.1\|912849_913407_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LS483414.1\|SQG94983.1\|921033_922356_-\|amino-acid-symporter	unknown	unknown	gnl\|CDD\|224040
LS483414.1\|SQG94984.1\|922885_925204_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
LS483414.1\|SQG94971.1\|906308_906680_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LS483414.1\|SQG94980.1\|917330_918167_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483414.1\|SQG94969.1\|904815_905601_-\|ABC-transporter-permease-protein	unknown	unknown	unknown
LS483414.1\|SQG94974.1\|911129_912632_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LS483414.1\|SQG94967.1\|903291_903480_+\|phage-protein	unknown	unknown	gnl\|CDD\|269889
LS483414.1\|SQG94966.1\|902392_903181_+\|exotoxin-M-precursor	unknown	unknown	gnl\|CDD\|280949
LS483414.1\|SQG94985.1\|925566_925815_+\|transglycosylase-associated-family-protein	unknown	unknown	gnl\|CDD\|225170
LS483414.1\|SQG94976.1\|913582_915397_+\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LS483414.1\|SQG94979.1\|916685_917315_+\|histidine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483414.1\|SQG94968.1\|904070_904685_+\|membrane-protein	unknown	unknown	gnl\|CDD\|223475
LS483414.1\|SQG94970.1\|905610_906309_-\|ABC-transporter-family-protein	unknown	unknown	gnl\|CDD\|224054
LS483414.1\|SQG94973.1\|910053_911067_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
LS483414.1\|SQG94982.1\|919678_920914_-\|cation-diffusion-facilitator-transporter-family-protein	unknown	unknown	gnl\|CDD\|223131

Protein	Function_ID	Function_description	E-value
LS483414.1\|SQG94972.1\|906863_909974_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LS483414.1\|SQG94977.1\|915592_915928_+\|phosphonoacetate-hydrolase	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
LS483414.1\|SQG94981.1\|918535_919309_+\|protein-B	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	3.33966e-97
LS483414.1\|SQG94978.1\|916034_916676_+\|histidine-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
LS483414.1\|SQG94975.1\|912849_913407_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	1.75321e-38
LS483414.1\|SQG94984.1\|922885_925204_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
LS483414.1\|SQG94971.1\|906308_906680_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
LS483414.1\|SQG94980.1\|917330_918167_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.15422e-109
LS483414.1\|SQG94983.1\|921033_922356_-\|amino-acid-symporter	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LS483414.1\|SQG94974.1\|911129_912632_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LS483414.1\|SQG94967.1\|903291_903480_+\|phage-protein	gnl\|CDD\|269889	cd06603, GH31_GANC_GANAB_alpha, neutral alpha-glucosidase C, neutral alpha-glucosidase AB. This subgroup includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.	0.00788697
LS483414.1\|SQG94966.1\|902392_903181_+\|exotoxin-M-precursor	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	2.95713e-08
LS483414.1\|SQG94985.1\|925566_925815_+\|transglycosylase-associated-family-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	6.94105e-14
LS483414.1\|SQG94976.1\|913582_915397_+\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LS483414.1\|SQG94979.1\|916685_917315_+\|histidine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	5.61041e-111
LS483414.1\|SQG94968.1\|904070_904685_+\|membrane-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
LS483414.1\|SQG94970.1\|905610_906309_-\|ABC-transporter-family-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
LS483414.1\|SQG94973.1\|910053_911067_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
LS483414.1\|SQG94982.1\|919678_920914_-\|cation-diffusion-facilitator-transporter-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	5.69788e-95

>LS483414.1|SQG94975.1|912849_913407_+|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTKDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LS483414.1|SQG94974.1|911129_912632_+|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVAATQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LS483414.1|SQG94973.1|910053_911067_+|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LS483414.1|SQG94972.1|906863_909974_+|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQVIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDAKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKISGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LS483414.1|SQG94971.1|906308_906680_-|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LS483414.1|SQG94970.1|905610_906309_-|ABC-transporter-family-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LS483414.1|SQG94969.1|904815_905601_-|ABC-transporter-permease-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LS483414.1|SQG94968.1|904070_904685_+|membrane-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LS483414.1|SQG94967.1|903291_903480_+|phage-protein
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK
>LS483414.1|SQG94966.1|902392_903181_+|exotoxin-M-precursor
MRIFLHQNCRLVNMSTTFFIVVLSLMVFSVRMVSAEGTINIKDIYPPRWDVDKTLSPTTLREIYNRDTIKKVNKPITGKRGTQVIMDAQHKTKVWEFDDYNFIISSNLHPSVEGKFNVGDNVDVFGLALSAEVFSKDQIHSINGGLVKVNERKGAGKTIYMNVFIDGHKKDDTSKYKITFEKSPVTFQEVDVRLRKSFMLNDEIKLYQYDSKVLSGNWEFHGSGEKEEGADLFKYPDYRYNNLIDIDKKSHIDVYLFTNKEN
>LS483414.1|SQG94976.1|913582_915397_+|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSRESTYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLTTTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LS483414.1|SQG94977.1|915592_915928_+|phosphonoacetate-hydrolase
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LS483414.1|SQG94978.1|916034_916676_+|histidine-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LS483414.1|SQG94979.1|916685_917315_+|histidine-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKSDAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LS483414.1|SQG94980.1|917330_918167_+|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQDKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDALLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LS483414.1|SQG94981.1|918535_919309_+|protein-B
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVEKLDEGHQQLEAIKHEAKGTDIEATINKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>LS483414.1|SQG94982.1|919678_920914_-|cation-diffusion-facilitator-transporter-family-protein
MTLDPIANLKLARKGPIVSIIVYLLLSAAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMILEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLVDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHPTHYRIVKM
>LS483414.1|SQG94983.1|921033_922356_-|amino-acid-symporter
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LS483414.1|SQG94984.1|922885_925204_+|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSVQPMQAHTIPSVSTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LS483414.1|SQG94985.1|925566_925815_+|transglycosylase-associated-family-protein
MGLIWTLIVGALIGVIAGALTKKSGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483414_1	1.2\|121662\|21\|LS483414\|PILER-CR	121662-121682	21	LS483414.1	121713-121733	1	0.952

1. spacer 1.2|121662|21|LS483414|PILER-CR matches to position: 121713-121733, mismatch: 1, identity: 0.952

tgcgcttcccccattaatgcc	CRISPR spacer
tgcgcttcctccattaatgcc	Protospacer
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MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

38856 : 51289

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG94135.1\|38856_42630_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	6.1e-40	27.0
SQG94136.1\|42863_44318_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.3e-54	32.7
SQG94137.1\|44345_45368_+	phosphoribosylaminoimidazole synthetase	R9TMC7	Synechococcus_phage	4.0e-63	41.8
SQG94138.1\|45535_46090_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
SQG94139.1\|46273_47821_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	3.4e-45	52.4
SQG94140.1\|47877_49002_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQG94141.1\|49254_50520_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQG94142.1\|50677_51289_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	2.4e-18	42.3

DBSCAN-SWA_2

623971 : 674307

Streptococcus_phage(65.45%)

terminase,integrase,portal,tail

attL 622102:622117|attR 660974:660989

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
622102:622117	attL	NA	NA	NA	NA
SQG94667.1\|623971_624811_+	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7
SQG94668.1\|624785_625646_+	GDSL family lipase	NA	NA	NA	NA
SQG94669.1\|625623_626211_+	membrane protein	NA	NA	NA	NA
SQG94670.1\|626309_626585_+	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
SQG94671.1\|626674_627817_-\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
SQG94672.1\|627953_628634_-	Uncharacterised protein	A0A097PAS7	Streptococcus_pyogenes_phage	1.2e-74	87.7
SQG94673.1\|628668_629427_-	phage transcriptional repressor	A0A097PBE5	Streptococcus_pyogenes_phage	3.1e-84	65.9
SQG94674.1\|629618_629720_+	Uncharacterised protein	NA	NA	NA	NA
SQG94675.1\|629816_629975_+	phage protein	A0A097PAP2	Streptococcus_pyogenes_phage	1.1e-23	98.1
SQG94676.1\|630005_630605_-	phage protein	A0A097PAT4	Streptococcus_pyogenes_phage	9.1e-108	99.5
SQG94677.1\|630659_630806_+	Uncharacterised protein	NA	NA	NA	NA
SQG94678.1\|630802_631285_-	Uncharacterised protein	NA	NA	NA	NA
SQG94679.1\|631358_631565_+	phage protein	A0A1X9I5S3	Streptococcus_phage	1.1e-17	64.7
SQG94680.1\|631606_631852_+	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	1.2e-34	95.1
SQG94681.1\|631810_632020_-	phage protein	NA	NA	NA	NA
SQG94682.1\|632169_632409_-	phage protein	NA	NA	NA	NA
SQG94683.1\|632575_632761_+	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQG94684.1\|632839_633151_+	excisionase	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
SQG94685.1\|633152_633323_+	phage protein	A7J273	Streptococcus_phage	2.9e-19	87.5
SQG94686.1\|633315_633519_+	phage protein	NA	NA	NA	NA
SQG94687.1\|633515_633902_+	phage protein	A7J274	Streptococcus_phage	6.8e-56	87.4
SQG94688.1\|633898_634051_+	phage protein	A7J275	Streptococcus_phage	9.9e-19	98.0
SQG94689.1\|634047_634251_+	phage protein	A7J276	Streptococcus_phage	3.7e-29	89.6
SQG94690.1\|634338_634638_+	phage protein	A7J277	Streptococcus_phage	5.6e-42	98.0
SQG94691.1\|634637_635795_+	phage protein	A7J278	Streptococcus_phage	1.0e-216	98.2
SQG94692.1\|635809_636367_+	phage protein	D2J040	Enterococcus_phage	3.3e-51	58.5
SQG94693.1\|636409_638332_+	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	98.9
SQG94694.1\|638336_640721_+	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	8.2e-277	94.6
SQG94695.1\|641106_641382_+	phage protein	A7J283	Streptococcus_phage	1.3e-45	97.8
SQG94696.1\|641378_642701_+	SNF2 family phage protein	A7J284	Streptococcus_phage	1.4e-249	97.0
SQG94697.1\|642701_642872_+	phage protein	A7J285	Streptococcus_phage	9.0e-21	92.3
SQG94698.1\|642864_643137_+	phage membrane protein	A7J287	Streptococcus_phage	5.7e-25	73.3
SQG94699.1\|643139_643286_+	Uncharacterised protein	NA	NA	NA	NA
SQG94700.1\|643269_643686_+	phage protein	A7J289	Streptococcus_phage	3.3e-72	99.3
SQG94701.1\|643775_644228_+\|terminase	terminase small subunit	A7J290	Streptococcus_phage	1.7e-66	95.7
SQG94702.1\|644205_645513_+\|terminase	terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	2.9e-183	75.0
SQG94703.1\|645524_647015_+\|portal	phage portal protein, SPP1 family	C9W9H5	Streptococcus_virus	1.3e-142	54.0
SQG94704.1\|646995_647910_+	Phage Mu protein F like protein	A1EAE3	Streptococcus_phage	1.3e-73	50.0
SQG94705.1\|647925_648192_+	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	4.1e-28	77.3
SQG94706.1\|648335_648869_+	phage protein	A0A141E0S7	Streptococcus_phage	1.8e-14	82.5
SQG94707.1\|648878_649259_+	structural protein	A0A0K2CNR0	Brevibacillus_phage	6.4e-06	36.3
SQG94708.1\|649261_650311_+	phage protein	A0A286QR01	Streptococcus_phage	1.8e-106	57.7
SQG94709.1\|650322_650589_+	phage protein	NA	NA	NA	NA
SQG94710.1\|650600_650954_+	phage protein	A0A2H4J002	uncultured_Caudovirales_phage	3.9e-26	52.1
SQG94711.1\|650950_651235_+	phage protein	A0A1P8BKV3	Lactococcus_phage	5.1e-08	36.6
SQG94712.1\|651246_651603_+	phage protein, HK97 gp10 family	A1EAF2	Streptococcus_phage	4.7e-19	44.0
SQG94713.1\|651599_651998_+	phage protein	A1EAF3	Streptococcus_phage	3.8e-25	44.5
SQG94714.1\|651985_652504_+\|tail	major tail protein	A1EAF4	Streptococcus_phage	2.2e-41	51.7
SQG94715.1\|652557_652926_+	Phage protein	NA	NA	NA	NA
SQG94716.1\|652946_653264_+	Uncharacterised protein	A1EAF6	Streptococcus_phage	6.9e-14	44.4
SQG94717.1\|653263_656011_+	phage protein	J7KDT4	Streptococcus_phage	1.8e-54	36.4
SQG94718.1\|656010_656781_+\|tail	phage tail protein	A1EAB1	Streptococcus_phage	1.2e-56	45.0
SQG94719.1\|656777_658889_+	phage protein	A3F656	Streptococcus_phage	3.8e-132	43.1
SQG94720.1\|658885_660100_+	phage protein	A3F657	Streptococcus_phage	5.0e-44	49.5
SQG94721.1\|660101_660416_+	phage protein	NA	NA	NA	NA
SQG94722.1\|660426_662316_+	gp58-like family protein	Q938J9	Temperate_phage	6.7e-189	75.7
660974:660989	attR	NA	NA	NA	NA
SQG94723.1\|662327_662756_+	phage protein	Q938J8	Temperate_phage	8.1e-58	84.3
SQG94724.1\|662758_663391_+	phage protein	Q938J7	Temperate_phage	2.0e-44	49.5
SQG94725.1\|663402_663675_+	phage membrane protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
SQG94726.1\|663671_663899_+	phage protein	A7J2B3	Streptococcus_phage	7.6e-31	98.7
SQG94727.1\|663907_664018_+	phage membrane protein	A7J2B4	Streptococcus_phage	1.8e-09	97.2
SQG94728.1\|664014_665223_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	2.9e-214	87.5
SQG94729.1\|665332_666313_-	Sdn	A7J2B8	Streptococcus_phage	1.3e-167	99.7
SQG94730.1\|666551_666731_+	Paratox	A3F673	Streptococcus_phage	3.4e-18	77.6
SQG94731.1\|666676_666793_+	Uncharacterised protein	NA	NA	NA	NA
SQG94732.1\|667565_668135_+	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA
SQG94733.1\|668135_670088_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	8.9e-144	46.3
SQG94734.1\|670455_672180_+	septation ring formation regulator	NA	NA	NA	NA
SQG94735.1\|672311_672770_-	hypothetical cytosolic protein	W6LLD2	Streptococcus_phage	1.8e-18	39.1
SQG94736.1\|672999_674307_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	1.2e-240	96.6

DBSCAN-SWA_3

739297 : 796544

Streptococcus_phage(23.81%)

transposase,tRNA,protease,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG94795.1\|739297_741508_-	phosphoglycerol transferase	W6LM83	Streptococcus_phage	2.9e-268	69.1
SQG94796.1\|741615_742779_+	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	4.5e-143	65.1
SQG94797.1\|742775_743462_+	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQG94798.1\|743555_744722_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
SQG94799.1\|744782_745124_+	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	40.2
SQG94800.1\|745344_746697_+	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	9.2e-31	24.2
SQG94801.1\|746784_748053_-	folylpolyglutamate synthase	NA	NA	NA	NA
SQG94802.1\|748082_748523_-	membrane protein	NA	NA	NA	NA
SQG94803.1\|748757_749900_+	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	6.3e-25	27.5
SQG94804.1\|749911_751126_+	thiamine biosynthesis protein thiI	NA	NA	NA	NA
SQG94805.1\|751262_752456_+	metallophosphatase	A0A0N9SJ77	Staphylococcus_phage	1.7e-33	30.7
SQG94806.1\|752474_753422_-\|transposase	transposase	H7BW61	unidentified_phage	7.6e-32	34.6
SQG94807.1\|753859_754612_-	Uncharacterised protein	NA	NA	NA	NA
SQG94808.1\|754622_755318_-	multidrug ABC transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	1.8e-30	36.3
SQG94809.1\|755330_755519_-	transcriptional regulator	A0A142LP09	Marinitoga_camini_virus	7.7e-05	40.0
SQG94810.1\|755523_755871_-	Uncharacterised protein	NA	NA	NA	NA
SQG94811.1\|755975_756509_-	Uncharacterised protein	NA	NA	NA	NA
SQG94812.1\|756821_756959_+	Uncharacterised protein	NA	NA	NA	NA
SQG94813.1\|756908_757406_-\|transposase	transposase	NA	NA	NA	NA
SQG94814.1\|757680_757995_+	50S ribosomal protein L21	NA	NA	NA	NA
SQG94815.1\|758006_758333_+	hypothetical ribosome-associated protein	NA	NA	NA	NA
SQG94816.1\|758360_758654_+	LSU ribosomal protein L27p	NA	NA	NA	NA
SQG94817.1\|759001_759916_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQG94818.1\|759912_760371_+	signal peptidase II	NA	NA	NA	NA
SQG94819.1\|760360_761251_+	ribosomal large subunit pseudouridine synthase D	A0A2H4UV25	Bodo_saltans_virus	3.6e-07	25.3
SQG94820.1\|761646_762168_+	Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein pyrR	NA	NA	NA	NA
SQG94821.1\|762183_763443_+	uracil permease	Q9KX94	Enterobacteria_phage	1.2e-61	36.2
SQG94822.1\|763452_764439_+	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.2e-25	32.6
SQG94823.1\|764472_765555_+	carbamoyl phosphate synthase small subunit	R4TGJ8	Halovirus	8.0e-62	36.9
SQG94824.1\|765800_768977_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
SQG94825.1\|769182_770454_+	RND family efflux transporter MFP subunit	NA	NA	NA	NA
SQG94826.1\|770453_771164_+	bacitracin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.5e-37	43.0
SQG94827.1\|771175_772396_+	permease family protein	NA	NA	NA	NA
SQG94828.1\|772649_774383_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
SQG94829.1\|774509_774782_+	30S ribosomal protein S16	NA	NA	NA	NA
SQG94830.1\|774791_775031_+	RNA binding protein	NA	NA	NA	NA
SQG94831.1\|775950_778977_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA
SQG94832.1\|778996_779398_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
SQG94833.1\|779577_780453_-	cation diffusion facilitator transporter family protein	NA	NA	NA	NA
SQG94834.1\|780588_781110_+	transcriptional regulator, TetR family	NA	NA	NA	NA
SQG94835.1\|781324_781843_+	16S rRNA-processing protein	NA	NA	NA	NA
SQG94836.1\|781832_782564_+\|tRNA	tRNA (guanine-N(1)-)-methyltransferase	NA	NA	NA	NA
SQG94837.1\|782563_783556_+	thioredoxin reductase	Q9JRK7	Streptococcus_phage	8.2e-29	54.9
SQG94838.1\|783733_784792_+	regulatory protein	NA	NA	NA	NA
SQG94839.1\|784804_785728_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
SQG94840.1\|786028_786697_+	deoR-like helix-turn-helix domain-containing protein	A0A077SK06	Escherichia_phage	2.2e-17	32.7
SQG94841.1\|786693_787605_+	1-phosphofructokinase	NA	NA	NA	NA
SQG94842.1\|787601_789548_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA
SQG94843.1\|789646_790240_+	N-acetylmuramidase	A0A249Y0X5	Enterococcus_phage	3.5e-11	33.8
SQG94844.1\|790391_791099_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	Q332B8	Clostridium_botulinum_C_phage	1.9e-11	36.4
SQG94845.1\|791254_791374_-\|transposase	degenerate transposase	NA	NA	NA	NA
SQG94846.1\|792055_793075_-\|protease	igG-degrading protease	NA	NA	NA	NA
SQG94847.1\|793578_793755_+	nucleoside diphosphate kinase	NA	NA	NA	NA
SQG94848.1\|793982_794363_+\|transposase	transposase	NA	NA	NA	NA
SQG94849.1\|794362_795211_+	degV family protein	NA	NA	NA	NA
SQG94850.1\|795335_796544_+\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	5.3e-38	45.0

DBSCAN-SWA_4

846544 : 909974

Streptococcus_phage(68.33%)

portal,terminase,holin,integrase,tRNA,tail

attL 848885:848902|attR 916322:916339

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG94896.1\|846544_847444_+\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQG94897.1\|847516_848755_+	GTP-binding protein HflX	NA	NA	NA	NA
SQG94898.1\|848747_849383_+	cystathionine beta-lyase	NA	NA	NA	NA
848885:848902	attL	NA	NA	NA	NA
SQG94899.1\|849397_850327_+	ribonuclease Z	NA	NA	NA	NA
SQG94900.1\|850326_851091_+	short chain dehydrogenase	NA	NA	NA	NA
SQG94901.1\|851087_853298_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	8.7e-71	29.6
SQG94902.1\|853447_853966_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-30	42.4
SQG94903.1\|854046_854730_+	DNA replication protein DnaD	Q938N2	Temperate_phage	2.2e-09	36.8
SQG94904.1\|854726_855383_+	endonuclease III	NA	NA	NA	NA
SQG94905.1\|855454_856141_+	SAM-dependent methyltransferase	NA	NA	NA	NA
SQG94906.1\|856130_856919_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQG94907.1\|856958_858065_+	FAD dependent oxidoreductase family protein	NA	NA	NA	NA
SQG94908.1\|858122_858992_+	glucose-1-phosphate thymidyl transferase	K7QKA7	Escherichia_phage	2.4e-101	64.6
SQG94909.1\|858991_859585_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
SQG94910.1\|859828_860869_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-68	43.9
SQG94911.1\|860950_862090_-\|integrase	phage integrase	A1EAB7	Streptococcus_phage	4.4e-119	55.8
SQG94912.1\|862217_862484_-	phage protein	NA	NA	NA	NA
SQG94913.1\|862495_862882_-	phage protein	M1PFJ2	Streptococcus_phage	3.3e-34	55.5
SQG94914.1\|862884_863235_-	phage DNA-binding protein	M1PKY8	Streptococcus_phage	1.6e-35	62.6
SQG94915.1\|863530_863701_+	phage protein	X2L066	Streptococcus_phage	5.1e-08	55.8
SQG94916.1\|863726_864515_-	phage membrane protein	NA	NA	NA	NA
SQG94917.1\|864565_864757_+	phage DNA-binding protein	A0A141DZR9	Streptococcus_phage	4.7e-18	69.8
SQG94918.1\|864835_865147_+	phage protein	A1EAC3	Streptococcus_phage	1.4e-48	85.3
SQG94919.1\|865148_865319_+	phage protein	A7J273	Streptococcus_phage	1.2e-20	89.3
SQG94920.1\|865311_865515_+	phage protein	NA	NA	NA	NA
SQG94921.1\|865511_865628_+	phage protein	A7J274	Streptococcus_phage	2.1e-05	78.6
SQG94922.1\|865614_865893_+	phage protein	A7J274	Streptococcus_phage	1.5e-44	95.7
SQG94923.1\|865889_866027_+	phage protein	NA	NA	NA	NA
SQG94924.1\|866036_866240_+	phage protein	A7J276	Streptococcus_phage	9.4e-33	100.0
SQG94925.1\|866327_866627_+	phage protein	A7J277	Streptococcus_phage	8.7e-43	98.0
SQG94926.1\|866626_867784_+	phage protein	A7J278	Streptococcus_phage	3.0e-216	97.9
SQG94927.1\|867798_868356_+	phage protein	D2J040	Enterococcus_phage	3.3e-51	58.5
SQG94928.1\|868398_870321_+	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	98.9
SQG94929.1\|870325_872710_+	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	7.4e-286	97.8
SQG94930.1\|873074_873350_+	phage protein	A7J283	Streptococcus_phage	1.3e-45	97.8
SQG94931.1\|873346_874669_+	SNF2 family phage protein	A7J284	Streptococcus_phage	9.6e-251	97.0
SQG94932.1\|874669_874837_+	phage protein	A7J285	Streptococcus_phage	4.3e-23	92.7
SQG94933.1\|874833_875100_+	phage protein	A7J287	Streptococcus_phage	2.7e-19	64.0
SQG94934.1\|875102_875645_+	Uncharacterised protein	A0MN47	Thermus_phage	2.2e-28	38.9
SQG94935.1\|875736_875928_+	phage protein	NA	NA	NA	NA
SQG94936.1\|875924_876341_+	phage protein	A7J289	Streptococcus_phage	6.6e-73	100.0
SQG94937.1\|876430_876883_+\|terminase	phage terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
SQG94938.1\|876872_878150_+\|terminase	terminase large subunit	A7J291	Streptococcus_phage	6.9e-246	99.5
SQG94939.1\|878165_879698_+\|portal	phage portal protein	A7J292	Streptococcus_phage	3.3e-287	98.4
SQG94940.1\|879657_881106_+	phage protein	A7J293	Streptococcus_phage	1.2e-278	99.8
SQG94941.1\|881205_881322_+	phage membrane protein	A7J294	Streptococcus_phage	2.0e-08	100.0
SQG94942.1\|881326_881593_+	putative phage associated protein	Q938K9	Temperate_phage	2.9e-37	96.6
SQG94943.1\|881754_882324_+	phage protein	A7J296	Streptococcus_phage	1.9e-83	100.0
SQG94944.1\|882336_883224_+	phage protein	A7J297	Streptococcus_phage	2.1e-161	100.0
SQG94945.1\|883235_883592_+	phage protein	A7J298	Streptococcus_phage	4.6e-59	100.0
SQG94946.1\|883602_883881_+	phage protein	A7J299	Streptococcus_phage	1.9e-47	100.0
SQG94947.1\|883877_884222_+	phage protein	A7J2A0	Streptococcus_phage	5.1e-55	98.2
SQG94948.1\|884225_884585_+	phage protein	A7J2A1	Streptococcus_phage	1.2e-57	98.3
SQG94949.1\|884596_885196_+\|tail	phage major tail protein	A7J2A2	Streptococcus_phage	1.7e-90	97.1
SQG94950.1\|885249_885705_+	phage protein	A7J2A3	Streptococcus_phage	5.3e-76	99.3
SQG94951.1\|885779_886013_+	phage protein	A7J2A4	Streptococcus_phage	6.4e-33	97.4
SQG94952.1\|886027_890410_+\|tail	phage minor tail protein	A7J2A5	Streptococcus_phage	3.0e-224	74.8
SQG94953.1\|890421_891264_+	phage protein	A7J2A6	Streptococcus_phage	9.7e-156	97.5
SQG94954.1\|891273_893256_+	phage protein	A7J2A7	Streptococcus_phage	0.0e+00	93.9
SQG94955.1\|893252_894476_+	phage protein	A3F657	Streptococcus_phage	8.5e-44	48.9
SQG94956.1\|894477_894792_+	phage protein	NA	NA	NA	NA
SQG94957.1\|894802_896689_+	gp58-like family protein	Q938J9	Temperate_phage	1.3e-203	80.3
SQG94958.1\|896700_897132_+	phage protein	Q938J8	Temperate_phage	1.1e-73	100.0
SQG94959.1\|897134_897740_+	phage protein	Q938J7	Temperate_phage	5.6e-89	99.5
SQG94960.1\|897757_898033_+\|holin	phage holin	A7J2B2	Streptococcus_phage	4.4e-41	98.9
SQG94961.1\|898029_898257_+	phage protein	A7J2B3	Streptococcus_phage	5.8e-31	98.7
SQG94962.1\|898372_899578_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	1.8e-211	86.0
SQG94963.1\|899716_900241_+	phage protein	Q938J3	Temperate_phage	4.0e-99	100.0
SQG94964.1\|900228_901095_+	phage protein	Q938J2	Temperate_phage	3.7e-134	100.0
SQG94965.1\|901397_902111_+	mitogen	Q938J1	Temperate_phage	9.0e-78	59.5
SQG94966.1\|902392_903181_+	exotoxin M precursor	Q938J1	Temperate_phage	1.2e-46	41.4
SQG94967.1\|903291_903480_+	phage protein	A3F673	Streptococcus_phage	1.2e-21	84.7
SQG94968.1\|904070_904685_+	membrane protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
SQG94969.1\|904815_905601_-	ABC transporter permease protein	NA	NA	NA	NA
SQG94970.1\|905610_906309_-	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQG94971.1\|906308_906680_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQG94972.1\|906863_909974_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	5.4e-119	29.8
916322:916339	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1115047 : 1172463

Streptococcus_phage(58.93%)

portal,terminase,integrase,protease,tail

attL 1131594:1131609|attR 1177817:1177832

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG95170.1\|1115047_1115374_-\|protease	protease	NA	NA	NA	NA
SQG95171.1\|1115403_1116189_-	acetyl esterase	NA	NA	NA	NA
SQG95172.1\|1116321_1117983_-	Zn-dependent hydrolase	NA	NA	NA	NA
SQG95173.1\|1118186_1118945_-	spermidine/putrescine import ATP-binding protein potA	A0A1V0SE00	Indivirus	5.9e-11	28.3
SQG95174.1\|1118941_1119811_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SQG95175.1\|1119986_1120151_-	Uncharacterised protein	NA	NA	NA	NA
SQG95176.1\|1120155_1121154_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQG95177.1\|1121507_1123160_+	fibronectin-binding protein	A0A1J0F9J4	Only_Syngen_Nebraska_virus	1.7e-07	41.0
SQG95178.1\|1123219_1124467_-	Tetratricopeptide repeat family protein	NA	NA	NA	NA
SQG95179.1\|1124456_1125638_-	permease	NA	NA	NA	NA
SQG95180.1\|1125695_1126172_-	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA
SQG95181.1\|1126775_1127486_-	exotoxin H precursor	NA	NA	NA	NA
SQG95182.1\|1127511_1128291_-	exotoxin I precursor	A0A075M4C7	Staphylococcus_phage	9.3e-28	32.7
SQG95183.1\|1128462_1129797_-	Phage lysin, N-acetylmuramoyl-L-alanine amidase	Q5MY96	Streptococcus_phage	1.3e-247	93.0
SQG95184.1\|1129797_1129905_-	phage membrane protein	A7J2B4	Streptococcus_phage	5.5e-08	97.1
SQG95185.1\|1129908_1130094_-	phage protein	Q938J5	Temperate_phage	1.9e-24	95.1
SQG95186.1\|1130090_1130387_-	phage protein	Q938J6	Temperate_phage	3.7e-46	98.0
SQG95187.1\|1130397_1131009_-	phage protein	Q938J7	Temperate_phage	2.7e-91	100.0
SQG95188.1\|1131011_1131443_-	phage protein	Q938J8	Temperate_phage	5.2e-73	99.3
SQG95189.1\|1131454_1133470_-	Phage infection protein	Q938J9	Temperate_phage	1.2e-212	83.9
1131594:1131609	attL	NA	NA	NA	NA
SQG95190.1\|1133480_1133795_-	phage protein	NA	NA	NA	NA
SQG95191.1\|1133796_1135011_-	phage protein	A3F657	Streptococcus_phage	5.0e-44	49.5
SQG95192.1\|1135007_1137155_-	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	94.0
SQG95193.1\|1137151_1137859_-	phage protein	Q938K2	Temperate_phage	1.1e-91	69.8
SQG95194.1\|1137858_1141782_-\|tail	phage tail protein	J7KDT4	Streptococcus_phage	1.9e-238	48.5
SQG95195.1\|1141991_1142318_-	phage protein	J7KK85	Streptococcus_phage	8.3e-39	75.0
SQG95196.1\|1142370_1142979_-\|tail	major tail protein	J7KKC8	Streptococcus_phage	6.7e-74	71.9
SQG95197.1\|1142994_1143420_-	phage protein	J7KBZ9	Streptococcus_phage	7.2e-67	84.4
SQG95198.1\|1143416_1143794_-	phage protein	J7KDM3	Streptococcus_phage	1.5e-47	76.0
SQG95199.1\|1143790_1144138_-	phage protein	J7KJ42	Streptococcus_phage	2.6e-46	80.9
SQG95200.1\|1144134_1144437_-	phage protein	J7KC36	Streptococcus_phage	3.0e-43	88.8
SQG95201.1\|1144581_1145766_-	phage protein	J7KJ82	Streptococcus_phage	1.5e-162	76.6
SQG95202.1\|1145790_1146456_-\|protease	phage ClpP protease	M1Q115	Streptococcus_phage	1.9e-90	77.7
SQG95203.1\|1146433_1147654_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	5.8e-186	81.9
SQG95204.1\|1147687_1147912_-	phage protein	Q938K9	Temperate_phage	3.6e-17	61.4
SQG95205.1\|1147904_1148075_-	phage protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
SQG95206.1\|1148071_1149826_-\|terminase	phage terminase, large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.1
SQG95207.1\|1149840_1150308_-\|terminase	phage terminase, small subunit	J7KC46	Streptococcus_phage	3.9e-82	98.7
SQG95208.1\|1150476_1150818_-	Phage endonuclease	J7KH36	Streptococcus_phage	9.6e-54	89.8
SQG95209.1\|1150814_1150955_-	Uncharacterised protein	NA	NA	NA	NA
SQG95210.1\|1151053_1151239_+	phage protein	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
SQG95211.1\|1151290_1151668_+	phage protein	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
SQG95212.1\|1151805_1152267_-	Uncharacterised protein	NA	NA	NA	NA
SQG95213.1\|1152285_1153200_-	phage protein	NA	NA	NA	NA
SQG95214.1\|1153971_1154412_-	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	5.0e-79	100.0
SQG95215.1\|1154684_1155320_-	phage protein	L0P368	Streptococcus_phage	2.5e-87	68.4
SQG95216.1\|1155319_1155721_-	Uncharacterised protein	NA	NA	NA	NA
SQG95217.1\|1155818_1156046_-	phage protein	A3F630	Streptococcus_phage	1.9e-26	76.0
SQG95218.1\|1156049_1156535_-	DNA N-4 cytosine methyltransferase M.NgoMXV	A0A097PAU8	Streptococcus_pyogenes_phage	4.6e-94	98.8
SQG95219.1\|1156538_1156823_-	phage protein	A3F628	Streptococcus_phage	8.6e-40	91.5
SQG95220.1\|1156819_1157233_-	phage protein	Q938M1	Temperate_phage	2.4e-35	63.8
SQG95221.1\|1157229_1157514_-	phage protein	A0A1P8VVP5	Streptococcus_phage	2.7e-49	97.9
SQG95222.1\|1157507_1157759_-	phage protein	A0A1P8VVV4	Streptococcus_phage	1.6e-42	98.8
SQG95223.1\|1157755_1158112_-	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	4.6e-59	96.6
SQG95224.1\|1158095_1158416_-	phage protein	A0A1P8VVL5	Streptococcus_phage	5.5e-51	94.3
SQG95225.1\|1158450_1158825_-	phage protein	A0A2H4JHE6	uncultured_Caudovirales_phage	8.2e-14	51.7
SQG95226.1\|1159075_1159990_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	3.9e-134	79.9
SQG95227.1\|1159995_1160550_-	DNA primase	J7KH16	Streptococcus_phage	3.1e-86	93.3
SQG95228.1\|1160539_1161343_-	phage protein	A0A1P8VVM6	Streptococcus_phage	1.5e-150	97.4
SQG95229.1\|1161354_1161813_-	phage protein	A0A1P8VVN0	Streptococcus_phage	3.8e-82	100.0
SQG95230.1\|1161828_1163058_-	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	1.3e-236	99.8
SQG95231.1\|1163159_1163840_-	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQG95232.1\|1163840_1164323_-	phage protein	A0A1P8VVS5	Streptococcus_phage	7.9e-78	98.8
SQG95233.1\|1164551_1164866_-	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	1.2e-50	95.2
SQG95234.1\|1164881_1165019_-	phage protein	A0A1P8VVR9	Streptococcus_phage	5.4e-16	91.1
SQG95235.1\|1165015_1165312_-	phage protein	A0A097PAT8	Streptococcus_pyogenes_phage	2.1e-49	100.0
SQG95236.1\|1165348_1165612_-	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	3.6e-40	98.9
SQG95237.1\|1165623_1165863_-	Cro/CI family phage transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	3.1e-35	97.5
SQG95238.1\|1165936_1166419_+	Uncharacterised protein	NA	NA	NA	NA
SQG95239.1\|1166415_1166562_-	Uncharacterised protein	NA	NA	NA	NA
SQG95240.1\|1166736_1167525_+	Phage transcriptional repressor	A0A1S5SD15	Streptococcus_phage	2.9e-85	62.6
SQG95241.1\|1167534_1167840_+	phage membrane protein	NA	NA	NA	NA
SQG95242.1\|1167923_1169048_+\|integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	2.4e-210	98.9
SQG95243.1\|1169321_1169942_+	phage protein	NA	NA	NA	NA
SQG95244.1\|1170198_1172463_-	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
1177817:1177832	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1219277 : 1247324

Streptococcus_phage(85.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG95289.1\|1219277_1219724_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-23	40.0
SQG95290.1\|1219892_1221110_-	Mobile element protein	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
SQG95291.1\|1221191_1221395_-	Mobile element protein	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
SQG95292.1\|1221855_1222086_-	Helix-turn-helix domain	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
SQG95293.1\|1222082_1222505_-	RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
SQG95294.1\|1223009_1223363_+	anaerobic benzoate catabolism transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
SQG95295.1\|1223708_1225628_-	tetracycline resistance protein TetM	A0A1S5SF82	Streptococcus_phage	0.0e+00	98.3
SQG95296.1\|1226004_1226940_-	putative conjugative transposon protein	A0A1S5SF22	Streptococcus_phage	7.7e-170	99.0
SQG95297.1\|1226936_1227938_-	lipoprotein, NLP/P60 family	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
SQG95298.1\|1227934_1230046_-	Tn916 ORF15 signal peptide containing protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
SQG95299.1\|1230114_1232562_-	Type IV secretory pathway, VirB4 components	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
SQG95300.1\|1232545_1233052_-	TcpE family	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
SQG95301.1\|1233026_1233524_-	Antirestriction protein	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
SQG95302.1\|1233640_1233862_-	FIG086557: Conjugation related protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
SQG95303.1\|1233904_1235110_-	transcriptional regulator protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
SQG95304.1\|1235287_1236673_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
SQG95305.1\|1236701_1237085_-	Bacterial protein of uncharacterised function (DUF961)	A0A1S5SF96	Streptococcus_phage	2.3e-64	100.0
SQG95306.1\|1237103_1237418_-	Bacterial protein of uncharacterised function (DUF961)	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
SQG95307.1\|1237733_1238006_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
SQG95308.1\|1238090_1243763_-	helicase	A0A248SL14	Klebsiella_phage	1.1e-90	30.6
SQG95309.1\|1243955_1245422_-	transcriptional regulator	NA	NA	NA	NA
SQG95310.1\|1245506_1247324_-	putative DNA topoisomerase	A0A2H4UU47	Bodo_saltans_virus	1.3e-16	22.7

DBSCAN-SWA_7

1293425 : 1393097

113

Temperate_phage(35.82%)

capsid,transposase,terminase,holin,integrase,protease,head,tRNA,tail

attL 1336160:1336176|attR 1387845:1387861

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG95351.1\|1293425_1293719_+\|transposase	transposase	NA	NA	NA	NA
SQG95352.1\|1294150_1294321_+\|transposase	transposase	U5P429	Shigella_phage	1.5e-07	46.3
SQG95353.1\|1294360_1294576_+	Transposase	U5P429	Shigella_phage	1.7e-08	42.4
SQG95354.1\|1294672_1295368_-\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQG95355.1\|1295386_1296148_-	hypothetical membrane spanning protein	NA	NA	NA	NA
SQG95356.1\|1296144_1296366_-	XRE family transcriptional regulator	NA	NA	NA	NA
SQG95357.1\|1296400_1296535_-	Uncharacterised protein	NA	NA	NA	NA
SQG95358.1\|1296698_1299317_-\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	1.9e-61	33.9
SQG95359.1\|1299703_1300759_-	foldase protein prsA 1	NA	NA	NA	NA
SQG95360.1\|1300821_1301493_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.4e-08	27.2
SQG95361.1\|1301594_1302791_-	major facilitator superfamily protein	NA	NA	NA	NA
SQG95362.1\|1303165_1304971_-	oligoendopeptidase F	NA	NA	NA	NA
SQG95363.1\|1304983_1305946_-	competence CoiA-like family protein	NA	NA	NA	NA
SQG95364.1\|1306240_1306957_-	16S pseudouridylate synthetase	NA	NA	NA	NA
SQG95365.1\|1307075_1307780_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQG95366.1\|1307981_1309010_+\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQG95367.1\|1309049_1310237_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQG95368.1\|1310350_1310941_-	S11 family peptidase	NA	NA	NA	NA
SQG95369.1\|1310937_1311186_-	lipoprotein	NA	NA	NA	NA
SQG95370.1\|1311241_1311388_-	Uncharacterised protein	NA	NA	NA	NA
SQG95371.1\|1311554_1312160_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
SQG95372.1\|1312256_1313297_-	DNA polymerase III subunit delta	NA	NA	NA	NA
SQG95373.1\|1313367_1315611_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.8e-55	59.2
SQG95374.1\|1315591_1316254_-	comE operon 1 domain-containing protein	NA	NA	NA	NA
SQG95375.1\|1316452_1317193_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQG95376.1\|1317232_1318087_+	methyltransferase	NA	NA	NA	NA
SQG95377.1\|1318076_1318355_+	GIY-YIG catalytic domain-containing protein	W8W2G4	Invertebrate_iridovirus	1.8e-05	36.0
SQG95378.1\|1318378_1320379_-	Kup system potassium uptake protein	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	5.8e-66	34.0
SQG95379.1\|1320506_1322126_-	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
SQG95380.1\|1322432_1323977_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	2.4e-35	29.1
SQG95381.1\|1324224_1324920_-	integral membrane family protein	NA	NA	NA	NA
SQG95382.1\|1324999_1326391_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
SQG95383.1\|1326589_1327636_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
SQG95384.1\|1327736_1328333_-	recombination protein	NA	NA	NA	NA
SQG95385.1\|1329122_1329902_-	formate transporter	NA	NA	NA	NA
SQG95386.1\|1330025_1330568_-	membrane protein	NA	NA	NA	NA
SQG95387.1\|1330728_1331250_-	3H domain-containing protein	NA	NA	NA	NA
SQG95388.1\|1331356_1332052_-	phosphoglyceromutase	NA	NA	NA	NA
SQG95389.1\|1332290_1333226_+	dihydroorotate dehydrogenase 1A	A0A1V0SH91	Hokovirus	4.6e-66	45.1
SQG95390.1\|1333525_1335388_-	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	5.4e-90	33.8
SQG95391.1\|1335917_1336100_-	paratox	A3F673	Streptococcus_phage	1.4e-19	76.7
1336160:1336176	attL	NA	NA	NA	NA
SQG95392.1\|1336212_1336995_-	Enterotoxin	A0A097PAT7	Streptococcus_pyogenes_phage	4.3e-49	45.8
SQG95393.1\|1337242_1338367_-	phage protein, Fic family	D7RWK9	Brochothrix_phage	3.1e-93	49.1
SQG95394.1\|1338502_1339720_-	N-acetylmuramoyl-L-alanine amidase	A0A1P8VVM5	Streptococcus_phage	9.1e-163	59.3
SQG95395.1\|1339716_1339830_-	phage membrane protein	A7J2B4	Streptococcus_phage	4.4e-08	94.3
SQG95396.1\|1339838_1340066_-	phage protein	A7J2B3	Streptococcus_phage	2.0e-31	100.0
SQG95397.1\|1340062_1340338_-\|holin	phage holin	A7J2B2	Streptococcus_phage	2.6e-41	100.0
SQG95398.1\|1340347_1340965_-	phage protein	A3F662	Streptococcus_phage	8.3e-88	94.6
SQG95399.1\|1340967_1341129_-	phage protein	NA	NA	NA	NA
SQG95400.1\|1341142_1343038_-	phage protein	Q938J9	Temperate_phage	5.9e-76	52.8
SQG95401.1\|1343048_1343363_-	phage protein	NA	NA	NA	NA
SQG95402.1\|1343364_1344579_-	phage protein	A3F657	Streptococcus_phage	5.0e-44	49.5
SQG95403.1\|1344575_1346723_-	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	95.4
SQG95404.1\|1346719_1347436_-	phage protein	Q938K2	Temperate_phage	2.9e-137	100.0
SQG95405.1\|1347432_1350693_-	phage protein	Q938K3	Temperate_phage	0.0e+00	99.5
SQG95406.1\|1350682_1351264_-	bacteriophage Gp15 family protein	Q938K4	Temperate_phage	4.9e-106	99.5
SQG95407.1\|1351267_1351702_-	phage protein	Q938K5	Temperate_phage	2.6e-72	100.0
SQG95408.1\|1351740_1352226_-\|tail	major tail shaft protein	Q938K6	Temperate_phage	1.6e-86	100.0
SQG95409.1\|1352225_1352624_-\|capsid	minor capsid protein	Q79S87	Temperate_phage	3.5e-71	100.0
SQG95410.1\|1352620_1352977_-	phage protein	Q79S88	Temperate_phage	4.5e-62	100.0
SQG95411.1\|1352976_1353336_-\|capsid	minor capsid protein - phage associated	Q79S86	Temperate_phage	1.0e-58	100.0
SQG95412.1\|1353298_1353715_-	phage protein	Q938K7	Temperate_phage	3.3e-56	99.1
SQG95413.1\|1353768_1354587_-\|head	putative major head protein	Q79S85	Temperate_phage	4.0e-146	100.0
SQG95414.1\|1354590_1355199_-	phage protein	Q938K8	Temperate_phage	1.3e-96	100.0
SQG95415.1\|1355330_1355552_-	secreted phage protein	Q938K9	Temperate_phage	9.6e-31	98.6
SQG95416.1\|1355659_1355899_-	phage protein	Q938L0	Temperate_phage	2.8e-36	100.0
SQG95417.1\|1355870_1357349_-\|capsid	capsid protein	Q938L1	Temperate_phage	5.3e-274	99.8
SQG95418.1\|1357353_1358856_-\|capsid	Minor capsid protein	Q938L2	Temperate_phage	5.4e-282	100.0
SQG95419.1\|1358869_1360081_-\|terminase	phage terminase	Q938L3	Temperate_phage	3.7e-225	99.7
SQG95420.1\|1360163_1360637_-	phage protein	Q938L4	Temperate_phage	7.3e-76	98.7
SQG95421.1\|1360687_1361065_-	phage transcriptional regulator	Q938L5	Temperate_phage	1.7e-67	100.0
SQG95422.1\|1361517_1362195_-	hypothetical amino acid ABC transporter ATP-binding protein	Q938L6	Temperate_phage	8.7e-131	100.0
SQG95423.1\|1362173_1362692_-	Chromosome partitioning protein parB	Q938L7	Temperate_phage	1.5e-90	100.0
SQG95424.1\|1363604_1364042_-	phage protein	A0A097PBF1	Streptococcus_pyogenes_phage	6.7e-76	98.6
SQG95425.1\|1364308_1364944_-	phage protein	L0P368	Streptococcus_phage	2.0e-89	69.4
SQG95426.1\|1364945_1365230_-	phage protein	A0A097PAV1	Streptococcus_pyogenes_phage	2.8e-38	88.3
SQG95427.1\|1365226_1365640_-	phage protein	Q938M1	Temperate_phage	6.4e-36	65.2
SQG95428.1\|1365649_1365919_-	phage protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
SQG95429.1\|1365915_1366200_-	phage protein	A0A1P8VVP5	Streptococcus_phage	7.0e-50	100.0
SQG95430.1\|1366193_1366382_-	phage protein	A3F626	Streptococcus_phage	6.7e-09	82.9
SQG95431.1\|1366504_1366609_-	phage associated protein	NA	NA	NA	NA
SQG95432.1\|1366605_1367001_-	phage protein	Q5YA86	Bacillus_phage	1.8e-40	58.8
SQG95433.1\|1366993_1367176_-	Uncharacterised protein	NA	NA	NA	NA
SQG95434.1\|1367416_1369660_-	ATPase	Q5YA88	Bacillus_phage	4.7e-282	63.7
SQG95435.1\|1369682_1369877_-	Uncharacterised protein	NA	NA	NA	NA
SQG95436.1\|1369889_1371473_-	DNA/RNA helicase	A0A097BY72	Enterococcus_phage	2.0e-234	77.8
SQG95437.1\|1371472_1372066_-	phage protein	A0A097BY29	Enterococcus_phage	1.7e-29	43.5
SQG95438.1\|1372087_1372222_-	phage protein	NA	NA	NA	NA
SQG95439.1\|1372260_1373343_-	phage protein	A0A0K2CZH1	Paenibacillus_phage	2.5e-103	53.3
SQG95440.1\|1373357_1374674_-	chromosome segregation ATPases	A0A097BY67	Enterococcus_phage	7.8e-152	63.8
SQG95441.1\|1374660_1374903_-	Uncharacterised protein	NA	NA	NA	NA
SQG95442.1\|1374904_1375123_-	phage protein	NA	NA	NA	NA
SQG95443.1\|1375132_1375276_-	phage protein	A0A1P8VVR9	Streptococcus_phage	3.4e-13	83.7
SQG95444.1\|1375259_1375490_-	Uncharacterised protein	NA	NA	NA	NA
SQG95445.1\|1375530_1375806_-	Transcriptional regulator, Cro family	A0A1P8VVR5	Streptococcus_phage	1.3e-29	97.0
SQG95446.1\|1375993_1376353_+	Transcriptional regulator, MerR family	A0A1P8VVN3	Streptococcus_phage	1.7e-56	95.0
SQG95447.1\|1376336_1376714_+	cI-like repressor	A0A1P8VVK5	Streptococcus_phage	1.6e-54	77.6
SQG95448.1\|1376724_1377246_+	phage protein	Q938N8	Temperate_phage	7.5e-66	97.7
SQG95449.1\|1377364_1378441_+\|integrase	prophage LambdaSa1, site-specific recombinase phage integrase family protein	Q0R5B4	Streptococcus_phage	7.5e-68	41.2
SQG95450.1\|1378803_1379151_-	50S ribosomal protein L19	NA	NA	NA	NA
SQG95451.1\|1379265_1380540_-	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	6.5e-95	51.3
SQG95452.1\|1380520_1380805_-	chorismate mutase	NA	NA	NA	NA
SQG95453.1\|1380980_1381430_-	flavodoxin	NA	NA	NA	NA
SQG95454.1\|1381823_1382765_+	DHH family protein	NA	NA	NA	NA
SQG95455.1\|1382879_1383140_+	50S ribosomal protein L31	NA	NA	NA	NA
SQG95456.1\|1383236_1384436_-	tagatose-6-phosphate aldose/ketose isomerase	NA	NA	NA	NA
SQG95457.1\|1384455_1385178_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQG95458.1\|1385334_1386882_-	high-affinity zinc uptake system protein	NA	NA	NA	NA
SQG95459.1\|1387034_1388432_-	dipeptidase	NA	NA	NA	NA
1387845:1387861	attR	NA	NA	NA	NA
SQG95460.1\|1388564_1389476_-	sporulation Regulator WhiA C terminal domain-containing protein	Q7AWZ3	Streptococcus_phage	1.0e-105	64.7
SQG95461.1\|1389472_1390450_-	transporter	A1IMD5	Streptococcus_phage	4.7e-138	73.8
SQG95462.1\|1390446_1391337_-	P-loop ATPase protein family protein	A0A0R8VB27	Thermobifida_phage	5.1e-06	29.5
SQG95463.1\|1391750_1393097_-\|tRNA	asparaginyl-tRNA synthetase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8

DBSCAN-SWA_8

1499793 : 1531078

Tupanvirus(14.29%)

transposase,tRNA,protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG95567.1\|1499793_1501737_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	6.8e-120	38.6
SQG95568.1\|1502158_1503493_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
SQG95569.1\|1503494_1504493_-	glycosyltransferase	NA	NA	NA	NA
SQG95570.1\|1504623_1505625_-	Catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
SQG95571.1\|1505798_1506884_+	Xaa-Pro dipeptidase	NA	NA	NA	NA
SQG95572.1\|1506932_1507598_+	NAD(P)H nitroreductase yfkO	NA	NA	NA	NA
SQG95573.1\|1507608_1507986_+	bleomycin resistance protein	NA	NA	NA	NA
SQG95574.1\|1508130_1509057_+	glucosyl transferase family 2	V5USA4	Oenococcus_phage	2.6e-77	47.5
SQG95575.1\|1509267_1509951_+	membrane protein	NA	NA	NA	NA
SQG95576.1\|1509950_1510877_+	membrane protein	NA	NA	NA	NA
SQG95577.1\|1510926_1511574_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
SQG95578.1\|1511688_1512408_-	glutamine cyclotransferase	NA	NA	NA	NA
SQG95579.1\|1512413_1512881_-	ssrA-binding protein	W5RAM5	Staphylococcus_phage	7.5e-41	57.0
SQG95580.1\|1512883_1515214_-	ribonuclease R	Q0GXV6	Lactococcus_phage	3.0e-90	39.6
SQG95581.1\|1515310_1515547_-	preprotein translocase subunit	NA	NA	NA	NA
SQG95582.1\|1515735_1516929_-	major facilitator superfamily protein	NA	NA	NA	NA
SQG95583.1\|1517050_1518553_-	ATPase	A0A248XCZ8	Klebsiella_phage	1.5e-74	41.6
SQG95584.1\|1518742_1519336_-	dephospho-CoA kinase	NA	NA	NA	NA
SQG95585.1\|1519332_1520160_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
SQG95586.1\|1520331_1521198_-	transcriptional regulator	NA	NA	NA	NA
SQG95587.1\|1522268_1522538_+	Uncharacterised protein	NA	NA	NA	NA
SQG95588.1\|1522885_1523275_-	histidine kinase	NA	NA	NA	NA
SQG95589.1\|1523680_1524445_-	Uncharacterised protein	NA	NA	NA	NA
SQG95590.1\|1524697_1525099_-	Uncharacterised protein	NA	NA	NA	NA
SQG95591.1\|1525535_1525856_-	role in replication	NA	NA	NA	NA
SQG95592.1\|1525878_1526103_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide	NA	NA	NA	NA
SQG95593.1\|1526412_1526835_+\|transposase	transposase	NA	NA	NA	NA
SQG95594.1\|1526831_1526981_+\|transposase	IS1191 transposase	NA	NA	NA	NA
SQG95595.1\|1527318_1527501_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQG95596.1\|1527589_1527724_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQG95597.1\|1528121_1528376_+	Uncharacterised protein	NA	NA	NA	NA
SQG95598.1\|1528680_1529157_-	phosphohydrolase	NA	NA	NA	NA
SQG95599.1\|1529176_1530073_-	GTP-binding protein Era	NA	NA	NA	NA
SQG95600.1\|1530192_1530600_-	diacylglycerol kinase	NA	NA	NA	NA
SQG95601.1\|1530580_1531078_-\|protease	metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_9

1579600 : 1585634

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQG95645.1\|1579600_1580428_+	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	1.7e-128	79.9
SQG95646.1\|1580501_1580858_-	arsenate reductase	M1PLC0	Streptococcus_phage	2.8e-40	66.7
SQG95647.1\|1581156_1581786_+	copper homeostasis protein	NA	NA	NA	NA
SQG95648.1\|1581832_1582225_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQG95649.1\|1582251_1583115_-	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	1.2e-116	75.7
SQG95650.1\|1583119_1583443_-	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQG95651.1\|1583847_1584087_-	Tpl protein	NA	NA	NA	NA
SQG95652.1\|1584105_1584981_-	DNA polymerase III subunit delta	M1NSC1	Streptococcus_phage	2.0e-55	41.4
SQG95653.1\|1584998_1585634_-	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage