CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483421	Streptococcus pyogenes strain NCTC10877 genome assembly, chromosome: 1	1 crisprs	DEDDh,cas3,csn2,cas2,cas1,cas9,csm6,DinG,csa3	1	3	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483421_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483421_2

992527-992760

TypeII

II-A

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	CRT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	PILER-CR

3 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LS483421_2

>merge|LS483421|2|992527-992760|CRISPRCasFinder,CRT,PILER-CR
GAATGGAGACCATTCAAAACAGCATAGCTCTAAAACGCTTAACTAAGTCCGCATACTTAATGACTGGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACTCCCCAGAACAACGTTTAATAATTTCGTCAGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACAGTCTTCACTAAATTTAAAATCATTGGATTGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483421|2|1|992527-992760|CRISPRCasFinder
GAATGGAGACCATTCAAAACAGCATAGCTCTAAAAC	GCTTAACTAAGTCCGCATACTTAATGACTG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCCCCAGAACAACGTTTAATAATTTCGTCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AGTCTTCACTAAATTTAAAATCATTGGATT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483421|2|1|992527-992760|CRT
GAATGGAGACCATTCAAAACAGCATAGCTCTAAAAC	GCTTAACTAAGTCCGCATACTTAATGACTG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCCCCAGAACAACGTTTAATAATTTCGTCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AGTCTTCACTAAATTTAAAATCATTGGATT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483421|2|2|992593-992760|PILER-CR
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCCCCAGAACAACGTTTAATAATTTCGTCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AGTCTTCACTAAATTTAAAATCATTGGATT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483421.1\|SQH10607.1\|985656_986148_-\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
LS483421.1\|SQH10605.1\|984006_984834_-\|phospotransferase-system-(PTS),-enzyme-II-component-D	unknown	unknown	gnl\|CDD\|226239
LS483421.1\|SQH10618.1\|999303_999936_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226884
LS483421.1\|SQH10606.1\|984830_985640_-\|PTS-system,-mannose-specific-IIC-component	unknown	unknown	gnl\|CDD\|226238
LS483421.1\|SQH10613.1\|992216_992414_-\|nucleoside-diphosphate-kinase-protein-Ndk	unknown	unknown	gnl\|CDD\|179085
LS483421.1\|SQH10604.1\|982221_983871_-\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483421.1\|SQH10619.1\|999935_1000700_-\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|319832
LS483421.1\|SQH10622.1\|1002654_1003296_-\|acetyltransferase-GNAT-Family	unknown	unknown	unknown
LS483421.1\|SQH10611.1\|988578_989748_-\|streptococcal-collagen-like-protein-(B)-SclB	unknown	unknown	gnl\|CDD\|237171
LS483421.1\|SQH10608.1\|986174_986600_-\|PTS-system-mannose-specific-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
LS483421.1\|SQH10610.1\|987955_988393_-\|methionine-sulfoxide-reductase-B	unknown	unknown	gnl\|CDD\|234692
LS483421.1\|SQH10612.1\|990050_991883_-\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
LS483421.1\|SQH10616.1\|993852_994722_-\|cytoplasmic-protein	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LS483421.1\|SQH10617.1\|994721_998825_-\|CRISPR-associated-protein,-Csn1-family	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LS483421.1\|SQH10614.1\|992862_993525_-\|CRISPR-associated-family-protein	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
LS483421.1\|SQH10620.1\|1000699_1001452_-\|oleoyl-[acyl-carrier-protein]-hydrolase	unknown	unknown	gnl\|CDD\|226401
LS483421.1\|SQH10621.1\|1001461_1002658_-\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
LS483421.1\|SQH10615.1\|993514_993826_-\|CRISPR-associated-Cas2-family-protein	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LS483421.1\|SQH10623.1\|1003419_1004775_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
LS483421.1\|SQH10609.1\|986806_987826_-\|hypothetical-membrane-spanning-protein	unknown	unknown	gnl\|CDD\|225411

Protein	Function_ID	Function_description	E-value
LS483421.1\|SQH10607.1\|985656_986148_-\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.00329e-54
LS483421.1\|SQH10605.1\|984006_984834_-\|phospotransferase-system-(PTS),-enzyme-II-component-D	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
LS483421.1\|SQH10618.1\|999303_999936_-\|membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.81173e-87
LS483421.1\|SQH10606.1\|984830_985640_-\|PTS-system,-mannose-specific-IIC-component	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
LS483421.1\|SQH10613.1\|992216_992414_-\|nucleoside-diphosphate-kinase-protein-Ndk	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.12531e-09
LS483421.1\|SQH10604.1\|982221_983871_-\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.48337e-77
LS483421.1\|SQH10619.1\|999935_1000700_-\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.61039e-128
LS483421.1\|SQH10611.1\|988578_989748_-\|streptococcal-collagen-like-protein-(B)-SclB	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	1.97399e-08
LS483421.1\|SQH10608.1\|986174_986600_-\|PTS-system-mannose-specific-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	2.02549e-30
LS483421.1\|SQH10610.1\|987955_988393_-\|methionine-sulfoxide-reductase-B	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	7.26176e-84
LS483421.1\|SQH10612.1\|990050_991883_-\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LS483421.1\|SQH10616.1\|993852_994722_-\|cytoplasmic-protein	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	9.96999e-131
LS483421.1\|SQH10617.1\|994721_998825_-\|CRISPR-associated-protein,-Csn1-family	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LS483421.1\|SQH10614.1\|992862_993525_-\|CRISPR-associated-family-protein	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.48365e-121
LS483421.1\|SQH10620.1\|1000699_1001452_-\|oleoyl-[acyl-carrier-protein]-hydrolase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	2.96369e-109
LS483421.1\|SQH10621.1\|1001461_1002658_-\|coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
LS483421.1\|SQH10615.1\|993514_993826_-\|CRISPR-associated-Cas2-family-protein	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.09684e-53
LS483421.1\|SQH10623.1\|1003419_1004775_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
LS483421.1\|SQH10609.1\|986806_987826_-\|hypothetical-membrane-spanning-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.20088e-103

>LS483421.1|SQH10613.1|992216_992414_-|nucleoside-diphosphate-kinase-protein-Ndk
MEQTFFMIKPDGVKQGGVVGEVLRWIERLRLTFKRFELRQASSKYLAKHDEALVINLLILNLKLT
>LS483421.1|SQH10612.1|990050_991883_-|GTP-binding-protein-LepA
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>LS483421.1|SQH10611.1|988578_989748_-|streptococcal-collagen-like-protein-(B)-SclB
MLTFGGASAVKADSSAAGQQKIQDMLQEQRQKFPRLEEYLKDSPNSGIERTPIFKYLTQMEAELNRYLETLDENLSQLKGEKGDQGPVGPAGKDGEVGPRGDRGETGPAGPVGPRGDKGEQGLPGKDGEQGERGPQGPAGKDGEAGAQGPAGPKGPRGDKGEQGPAGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQNGKDGERGPVGPAGKDGQDGKDGLPGKDGKDGQNGKAGLPGKDGKDGQPGKPAPKTPEVPQKPDTAPHTPKTPQIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>LS483421.1|SQH10610.1|987955_988393_-|methionine-sulfoxide-reductase-B
METSDELKQRIGDLSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYEQMEKEGYAQWLTLFDET
>LS483421.1|SQH10609.1|986806_987826_-|hypothetical-membrane-spanning-protein
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIVSTIATALLVAYGSQKWLRLDVNTATLVGVGSSICGGAAIAATAPVIKAKDDEVVKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYQAKKEHDIVTEEGFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>LS483421.1|SQH10608.1|986174_986600_-|PTS-system-mannose-specific-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQVLETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>LS483421.1|SQH10607.1|985656_986148_-|PTS-system-mannose/fructose-family-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>LS483421.1|SQH10606.1|984830_985640_-|PTS-system,-mannose-specific-IIC-component
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>LS483421.1|SQH10605.1|984006_984834_-|phospotransferase-system-(PTS),-enzyme-II-component-D
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>LS483421.1|SQH10604.1|982221_983871_-|two-component-sensor-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDDLGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPSQDLLFASNPHLGNAFSKSVYIQEVLRAAHPPKTLFKVAMDSEDGHYLMIIKPMIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLAVPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE
>LS483421.1|SQH10614.1|992862_993525_-|CRISPR-associated-family-protein
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYQYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>LS483421.1|SQH10615.1|993514_993826_-|CRISPR-associated-Cas2-family-protein
MFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>LS483421.1|SQH10616.1|993852_994722_-|cytoplasmic-protein
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPTNAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>LS483421.1|SQH10617.1|994721_998825_-|CRISPR-associated-protein,-Csn1-family
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFGSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQIYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGAYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDRGMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQTVKIVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD
>LS483421.1|SQH10618.1|999303_999936_-|membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLQTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>LS483421.1|SQH10619.1|999935_1000700_-|haloacid-dehalogenase-like-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQMTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>LS483421.1|SQH10620.1|1000699_1001452_-|oleoyl-[acyl-carrier-protein]-hydrolase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>LS483421.1|SQH10621.1|1001461_1002658_-|coproporphyrinogen-III-oxidase
MKNQGKWFIHRNILSPKWYNKTMSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFDSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLESEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>LS483421.1|SQH10622.1|1002654_1003296_-|acetyltransferase-GNAT-Family
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTQKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQAYLLTDMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>LS483421.1|SQH10623.1|1003419_1004775_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483421_1	1.2\|989102\|45\|LS483421\|PILER-CR	989102-989146	45	LS483421.1	989178-989222	1	0.978

1. spacer 1.2|989102|45|LS483421|PILER-CR matches to position: 989178-989222, mismatch: 1, identity: 0.978

cacgttcaccatctttgccgttttggccgtccttgccggctggac	CRISPR spacer
cacgttcaccatcttttccgttttggccgtccttgccggctggac	Protospacer
**************** ****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448871	Streptococcus phage Javan196, complete genome	36731-36760	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448942	Streptococcus phage Javan448, complete genome	21979-22008	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448952	Streptococcus phage Javan472, complete genome	36146-36175	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448792	Streptococcus phage Javan521, complete genome	35673-35702	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448976	Streptococcus phage Javan528, complete genome	34640-34669	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448964	Streptococcus phage Javan502, complete genome	30836-30865	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448697	Streptococcus phage Javan185, complete genome	36731-36760	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448944	Streptococcus phage Javan452, complete genome	38957-38986	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	NC_004584	Streptococcus prophage 315.1, complete genome	35266-35295	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448693	Streptococcus phage Javan177, complete genome	36731-36760	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448696	Streptococcus phage Javan183, complete genome	36731-36760	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448963	Streptococcus phage Javan498, complete genome	26624-26653	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448958	Streptococcus phage Javan486, complete genome	35929-35958	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448770	Streptococcus phage Javan477, complete genome	35673-35702	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448868	Streptococcus phage Javan188, complete genome	36732-36761	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448978	Streptococcus phage Javan532, complete genome	35160-35189	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448866	Streptococcus phage Javan184, complete genome	36731-36760	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448785	Streptococcus phage Javan507, complete genome	35161-35190	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448950	Streptococcus phage Javan464, complete genome	36187-36216	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448764	Streptococcus phage Javan457, complete genome	28685-28714	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448699	Streptococcus phage Javan189, complete genome	36731-36760	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448867	Streptococcus phage Javan186, complete genome	36731-36760	0	1.0
LS483421_2	2.2\|992629\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992629-992658	30	MK448950	Streptococcus phage Javan464, complete genome	18080-18109	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448767	Streptococcus phage Javan467, complete genome	5181-5210	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448771	Streptococcus phage Javan481, complete genome	5181-5210	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448973	Streptococcus phage Javan522, complete genome	7086-7115	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448942	Streptococcus phage Javan448, complete genome	5181-5210	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448775	Streptococcus phage Javan489, complete genome	9201-9230	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	5286-5315	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448969	Streptococcus phage Javan514, complete genome	8127-8156	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448794	Streptococcus phage Javan525, complete genome	7396-7425	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448964	Streptococcus phage Javan502, complete genome	5166-5195	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448943	Streptococcus phage Javan450, complete genome	5181-5210	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448972	Streptococcus phage Javan520, complete genome	5181-5210	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448786	Streptococcus phage Javan509, complete genome	5181-5210	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448774	Streptococcus phage Javan487, complete genome	5166-5195	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448778	Streptococcus phage Javan493, complete genome	7101-7130	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448963	Streptococcus phage Javan498, complete genome	1771-1800	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448773	Streptococcus phage Javan485, complete genome	8127-8156	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448958	Streptococcus phage Javan486, complete genome	7410-7439	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448777	Streptococcus phage Javan491, complete genome	5540-5569	0	1.0
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448765	Streptococcus phage Javan459, complete genome	7396-7425	0	1.0
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448771	Streptococcus phage Javan481, complete genome	30536-30565	1	0.967
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448941	Streptococcus phage Javan446, complete genome	38393-38422	1	0.967
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448962	Streptococcus phage Javan496, complete genome	26804-26833	1	0.967
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448681	Streptococcus phage Javan141, complete genome	5259-5288	1	0.967
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448852	Streptococcus phage Javan140, complete genome	36141-36170	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448675	Streptococcus phage Javan129, complete genome	39056-39085	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448858	Streptococcus phage Javan166, complete genome	42024-42053	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448769	Streptococcus phage Javan471, complete genome	31427-31456	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448684	Streptococcus phage Javan151, complete genome	31427-31456	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448690	Streptococcus phage Javan169, complete genome	38710-38739	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	NC_009819	Streptococcus phage P9, complete genome	35694-35723	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448850	Streptococcus phage Javan132, complete genome	38156-38185	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448854	Streptococcus phage Javan146, complete genome	38718-38747	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448845	Streptococcus phage Javan118, complete genome	32768-32797	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448676	Streptococcus phage Javan131, complete genome	41053-41082	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448954	Streptococcus phage Javan476, complete genome	35589-35618	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448678	Streptococcus phage Javan135, complete genome	35657-35686	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448673	Streptococcus phage Javan119, complete genome	41993-42022	2	0.933
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448865	Streptococcus phage Javan182, complete genome	28853-28882	3	0.9
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	MK448679	Streptococcus phage Javan137, complete genome	34027-34056	3	0.9
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448944	Streptococcus phage Javan452, complete genome	9327-9356	4	0.867
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448672	Streptococcus phage Javan117, complete genome	4909-4938	4	0.867
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448849	Streptococcus phage Javan128, complete genome	5002-5031	4	0.867
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448685	Streptococcus phage Javan155, complete genome	6037-6066	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK449010	Streptococcus phage Javan90, complete genome	7686-7715	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK449012	Streptococcus phage Javan94, complete genome	6927-6956	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448690	Streptococcus phage Javan169, complete genome	8398-8427	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448845	Streptococcus phage Javan118, complete genome	6802-6831	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448833	Streptococcus phage Javan87, complete genome	7686-7715	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448853	Streptococcus phage Javan144, complete genome	6037-6066	5	0.833
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448673	Streptococcus phage Javan119, complete genome	8277-8306	5	0.833
LS483421_2	2.2\|992629\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992629-992658	30	KU234532	Nostoc phage N1, complete genome	59810-59839	6	0.8
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	KM378617	Vibrio phage VpKK5, complete genome	6193-6222	7	0.767
LS483421_2	2.2\|992629\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992629-992658	30	NC_004949	Helicobacter pylori plasmid pHel5 complete sequence	4144-4173	7	0.767
LS483421_2	2.2\|992629\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992629-992658	30	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	247794-247823	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NZ_CP007187	Campylobacter coli RM1875 plasmid pRM1875_3.4kbp, complete sequence	137-166	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448946	Streptococcus phage Javan456, complete genome	7320-7349	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448852	Streptococcus phage Javan140, complete genome	4538-4567	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448871	Streptococcus phage Javan196, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448784	Streptococcus phage Javan505, complete genome	4537-4566	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448952	Streptococcus phage Javan472, complete genome	4659-4688	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448779	Streptococcus phage Javan497, complete genome	4589-4618	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448947	Streptococcus phage Javan458, complete genome	4537-4566	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448976	Streptococcus phage Javan528, complete genome	4758-4787	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448961	Streptococcus phage Javan494, complete genome	4758-4787	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448697	Streptococcus phage Javan185, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448968	Streptococcus phage Javan512, complete genome	4589-4618	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448693	Streptococcus phage Javan177, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448766	Streptococcus phage Javan465, complete genome	5723-5752	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448696	Streptococcus phage Javan183, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NC_009819	Streptococcus phage P9, complete genome	4755-4784	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448797	Streptococcus phage Javan531, complete genome	4589-4618	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448689	Streptococcus phage Javan163, complete genome	4537-4566	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448868	Streptococcus phage Javan188, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448866	Streptococcus phage Javan184, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448974	Streptococcus phage Javan524, complete genome	4538-4567	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	FN667788	Campylobacter phage CP220, complete genome	105962-105991	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448699	Streptococcus phage Javan189, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448789	Streptococcus phage Javan513, complete genome	4537-4566	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448678	Streptococcus phage Javan135, complete genome	4536-4565	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NC_004589	Streptococcus prophage 315.6, complete genome	4686-4715	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MK448867	Streptococcus phage Javan186, complete genome	4760-4789	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	541054-541083	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NC_019507	Campylobacter phage CP21, complete genome	173639-173668	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	HE815464	Campylobacter phage CP21 complete sequence	173639-173668	7	0.767
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	NC_041834	Campylobacter phage vB_CcoM-IBB_35 clone Contig5, complete sequence	19482-19511	7	0.767
LS483421_2	2.1\|992563\|30\|LS483421\|CRISPRCasFinder,CRT	992563-992592	30	NZ_CP032280	Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence	69725-69754	8	0.733
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MN657125	Psychrobacter sp. strain ANT_P59 plasmid pA59P2, complete sequence	1341-1370	9	0.7
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	LR588166	Pseudomonas phage vB_PaeM_MIJ3	57360-57389	10	0.667
LS483421_2	2.3\|992695\|30\|LS483421\|CRISPRCasFinder,CRT,PILER-CR	992695-992724	30	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	173899-173928	10	0.667

1. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

2. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

3. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

4. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

5. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

6. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

7. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

8. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

9. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

10. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

11. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

12. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

13. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

14. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

15. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

16. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

17. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

18. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

19. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

20. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

21. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

22. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 0, identity: 1.0

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatacttaatgactg	Protospacer
******************************

23. spacer 2.2|992629|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

tccccagaacaacgtttaataatttcgtca	CRISPR spacer
tccccagaacaacgtttaataatttcgtca	Protospacer
******************************

24. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

25. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

26. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

27. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

28. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

29. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

30. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

31. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

32. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

33. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

34. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

35. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

36. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

37. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

38. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

39. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

40. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

41. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

42. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 0, identity: 1.0

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcactaaatttaaaatcattggatt	Protospacer
******************************

43. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 1, identity: 0.967

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
acttaactaagtccgcatacttaatgactg	Protospacer
.*****************************

44. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 1, identity: 0.967

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
acttaactaagtccgcatacttaatgactg	Protospacer
.*****************************

45. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 1, identity: 0.967

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
acttaactaagtccgcatacttaatgactg	Protospacer
.*****************************

46. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.967

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaaatcattggatt	Protospacer
*******.**********************

47. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaaatccgcatatttaatgactg	Protospacer
**********.********.**********

48. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatatttgatgactg	Protospacer
*******************.**.*******

49. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactagatccgcatacttaatgactg	Protospacer
*********..*******************

50. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactagatccgcatacttaatgactg	Protospacer
*********..*******************

51. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactagatccgcatacttaatgactg	Protospacer
*********..*******************

52. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactagatccgcatacttaatgactg	Protospacer
*********..*******************

53. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatatttaataactg	Protospacer
*******************.*****.****

54. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatatttgatgactg	Protospacer
*******************.**.*******

55. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaaatccgcatatttaatgactg	Protospacer
**********.********.**********

56. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatatttaataactg	Protospacer
*******************.*****.****

57. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactagatccgcatacttaatgactg	Protospacer
*********..*******************

58. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatatttgatgactg	Protospacer
*******************.**.*******

59. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactagatccgcatacttaatgactg	Protospacer
*********..*******************

60. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.933

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gcttaactaagtccgcatatttaatgaccg	Protospacer
*******************.********.*

61. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 3, identity: 0.9

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
ctttaactaagtccgcatatttaatgactg	Protospacer
 .*****************.**********

62. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 3, identity: 0.9

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
gtttaactaagtccgcatatttgatgactg	Protospacer
*.*****************.**.*******

63. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 4, identity: 0.867

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcattgaact	Protospacer
*******.***********.******.*.*

64. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 4, identity: 0.867

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaaatccttgaact	Protospacer
*******.************** ***.*.*

65. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 4, identity: 0.867

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcattgaact	Protospacer
*******.***********.******.*.*

66. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcgtcgctaaatttaaaatcatcgaact	Protospacer
**** **.****************.*.*.*

67. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcatcgaact	Protospacer
*******.***********.****.*.*.*

68. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcatcgaact	Protospacer
*******.***********.****.*.*.*

69. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcatcgaact	Protospacer
*******.***********.****.*.*.*

70. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcatcgaact	Protospacer
*******.***********.****.*.*.*

71. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcttcgctaaatttaaagtcatcgaact	Protospacer
*******.***********.****.*.*.*

72. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
agtcgtcgctaaatttaaaatcatcgaact	Protospacer
**** **.****************.*.*.*

73. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 5, identity: 0.833

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aatcttcgctaaatttaaagtcattgaact	Protospacer
*.*****.***********.******.*.*

74. spacer 2.2|992629|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to KU234532 (Nostoc phage N1, complete genome) position: , mismatch: 6, identity: 0.8

tccccagaacaacgtttaataatttcgtca	CRISPR spacer
tccccagaagaacgtttaatagatttacca	Protospacer
********* ***********. **...**

75. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to KM378617 (Vibrio phage VpKK5, complete genome) position: , mismatch: 7, identity: 0.767

gcttaactaagtccgcatacttaatgactg-	CRISPR spacer
ccttaactaagtccgcattctt-ttccttgt	Protospacer
 ***************** ***  *  .**

76. spacer 2.2|992629|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NC_004949 (Helicobacter pylori plasmid pHel5 complete sequence) position: , mismatch: 7, identity: 0.767

tccccagaacaacgtttaataatttcgtca	CRISPR spacer
tagccgaaacaacgcttaataatttcgttg	Protospacer
*  **..*******.*************..

77. spacer 2.2|992629|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 7, identity: 0.767

tccccagaacaacgtttaataatttcgtca	CRISPR spacer
agacgacaacaacatttaataatttagtca	Protospacer
   * * ******.*********** ****

78. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007187 (Campylobacter coli RM1875 plasmid pRM1875_3.4kbp, complete sequence) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
gcttttcattaattttaaaatcattggcat	Protospacer
. *.****.*** **************  *

79. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

80. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

81. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

82. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

83. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttactt	Protospacer
*. .******.************** . **

84. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

85. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

86. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

87. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

88. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

89. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

90. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

91. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttactt	Protospacer
*. .******.************** . **

92. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

93. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

94. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

95. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

96. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

97. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

98. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

99. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
cttgtgaacttaatgtaaaatcattggatt	Protospacer
  * *  *** *** ***************

100. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

101. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

102. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

103. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

104. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
aagtttcactgaatttaaaatcatttcctt	Protospacer
*. .******.**************   **

105. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
tttcttcactaaatttaaattcactcaagt	Protospacer
  ***************** ***.* .* *

106. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
cttgtgaacttaatgtaaaatcattggatt	Protospacer
  * *  *** *** ***************

107. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
cttgtgaacttaatgtaaaatcattggatt	Protospacer
  * *  *** *** ***************

108. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to NC_041834 (Campylobacter phage vB_CcoM-IBB_35 clone Contig5, complete sequence) position: , mismatch: 7, identity: 0.767

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
cttgtgaacttaatgtaaaatcattggatt	Protospacer
  * *  *** *** ***************

109. spacer 2.1|992563|30|LS483421|CRISPRCasFinder,CRT matches to NZ_CP032280 (Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence) position: , mismatch: 8, identity: 0.733

gcttaactaagtccgcatacttaatgactg	CRISPR spacer
aaacaaccaagtccgcatacttaatcaatt	Protospacer
.  .***.***************** * *

110. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MN657125 (Psychrobacter sp. strain ANT_P59 plasmid pA59P2, complete sequence) position: , mismatch: 9, identity: 0.7

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
cagcttcactaaatttaatatcattatgca	Protospacer
 . *************** ******. ..

111. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 10, identity: 0.667

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
ctctatcactaaatttaaaatctttgagaa	Protospacer
  .. ***************** ***..

112. spacer 2.3|992695|30|LS483421|CRISPRCasFinder,CRT,PILER-CR matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 10, identity: 0.667

agtcttcactaaatttaaaatcattggatt	CRISPR spacer
ctctatcactaaatttaaaatctttgagaa	Protospacer
  .. ***************** ***..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36588 : 48949

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH09705.1\|36588_40362_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.0e-39	26.9
SQH09706.1\|40522_41977_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
SQH09707.1\|42004_43027_+	phosphoribosylaminoimidazole synthetase	A0A0E3FGG1	Synechococcus_phage	1.2e-62	41.1
SQH09708.1\|43194_43749_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.8e-25	36.1
SQH09709.1\|43932_45480_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
SQH09710.1\|45537_46662_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQH09711.1\|46914_48180_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQH09712.1\|48337_48949_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	4.0e-18	42.3

DBSCAN-SWA_2

628750 : 717924

110

Streptococcus_phage(57.89%)

terminase,holin,transposase,portal,capsid,integrase,tail,protease,tRNA

attL 679753:679770|attR 726062:726079

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH10242.1\|628750_629590_+	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7
SQH10243.1\|629564_630425_+	GDSL family lipase	NA	NA	NA	NA
SQH10244.1\|630402_630990_+	membrane protein	NA	NA	NA	NA
SQH10245.1\|631088_631364_+	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
SQH10246.1\|631453_632596_-\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	5.3e-173	77.1
SQH10247.1\|632718_633024_-	phage membrane protein	NA	NA	NA	NA
SQH10248.1\|633033_633822_-	Phage transcriptional repressor	A0A1S5SD15	Streptococcus_phage	2.0e-86	63.0
SQH10249.1\|633996_634098_+	Uncharacterised protein	NA	NA	NA	NA
SQH10250.1\|634194_634353_+	phage protein	A0A097PAP2	Streptococcus_pyogenes_phage	4.8e-24	100.0
SQH10251.1\|634382_634982_-	phage protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
SQH10252.1\|635075_635315_+	Cro/CI family phage transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	1.4e-35	98.7
SQH10253.1\|635325_635592_+	phage protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
SQH10254.1\|635526_636333_-	protein Ymh	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
SQH10255.1\|636381_636627_+	phage protein	A0A097PAP6	Streptococcus_pyogenes_phage	1.2e-34	95.1
SQH10256.1\|636585_636795_-	phage protein	NA	NA	NA	NA
SQH10257.1\|636945_637185_-	phage protein	NA	NA	NA	NA
SQH10258.1\|637351_637537_+	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQH10259.1\|637614_637926_+	excisionase	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
SQH10260.1\|637927_638062_+	phage protein	A0A1P8VVR9	Streptococcus_phage	9.6e-18	95.5
SQH10261.1\|638077_638392_+	Transcriptional regulator, Cro/CI family	A0A1P8VVN6	Streptococcus_phage	1.3e-49	94.2
SQH10262.1\|638539_639022_+	phage protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
SQH10263.1\|639022_639703_+	phage protein	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
SQH10264.1\|639804_641034_+	phage DNA/RNA helicase	A0A1P8VVM2	Streptococcus_phage	3.3e-237	100.0
SQH10265.1\|641049_641508_+	phage protein	A0A1P8VVN0	Streptococcus_phage	5.0e-82	99.3
SQH10266.1\|641510_642323_+	phage protein	A0A1P8VVM6	Streptococcus_phage	1.3e-152	97.4
SQH10267.1\|642312_643788_+	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.9e-248	86.7
SQH10268.1\|644049_644463_+	phage protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.8e-15	50.0
SQH10269.1\|644459_644780_+	phage protein	A0A1P8VVL5	Streptococcus_phage	7.1e-51	94.3
SQH10270.1\|644962_645121_+	phage protein	A0A1P8VVP9	Streptococcus_phage	4.2e-20	96.2
SQH10271.1\|645117_645306_+	phage protein	A0A1P8VVV4	Streptococcus_phage	5.0e-20	97.8
SQH10272.1\|645351_645636_+	phage protein	A0A1P8VVP5	Streptococcus_phage	2.2e-48	96.8
SQH10273.1\|645632_645902_+	phage protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
SQH10274.1\|645911_646265_+	phage protein	Q938M1	Temperate_phage	5.3e-31	58.3
SQH10275.1\|646261_646546_+	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.4e-37	89.4
SQH10276.1\|646547_647180_+	phage protein	L0P368	Streptococcus_phage	2.3e-85	68.6
SQH10277.1\|647182_647893_+	phage protein	Q938L9	Temperate_phage	3.0e-25	46.2
SQH10278.1\|647889_648261_+	Uncharacterised protein	NA	NA	NA	NA
SQH10279.1\|648536_648977_+	phage encoded transcriptional regulator, ArpU family	Q938L8	Temperate_phage	1.9e-78	99.3
SQH10280.1\|649561_649900_+	Phage endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
SQH10281.1\|650070_650538_+\|terminase	phage terminase, small subunit	J7KC46	Streptococcus_phage	3.9e-82	98.7
SQH10282.1\|650552_652307_+\|terminase	phage terminase, large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.2
SQH10283.1\|652303_652474_+	phage protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
SQH10284.1\|652466_652691_+	phage protein	Q938K9	Temperate_phage	3.6e-17	61.4
SQH10285.1\|652724_653945_+\|portal	phage portal protein	J7KDU3	Streptococcus_phage	2.0e-186	81.7
SQH10286.1\|653922_654588_+\|protease	phage ClpP protease	M1Q115	Streptococcus_phage	4.6e-92	77.7
SQH10287.1\|654613_655816_+\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	6.0e-135	64.4
SQH10288.1\|655951_656254_+	phage protein	J7KC36	Streptococcus_phage	6.1e-44	87.0
SQH10289.1\|656250_656598_+	phage protein	J7KJ42	Streptococcus_phage	1.5e-49	85.5
SQH10290.1\|656594_656972_+	phage protein	J7KDM3	Streptococcus_phage	1.4e-45	72.8
SQH10291.1\|656968_657394_+	phage protein	J7KBZ9	Streptococcus_phage	5.0e-68	85.1
SQH10292.1\|657410_658019_+\|tail	major tail protein	J7KKC8	Streptococcus_phage	2.3e-74	70.5
SQH10293.1\|658071_658398_+	phage protein	J7KK85	Streptococcus_phage	6.0e-37	73.1
SQH10294.1\|658427_658595_+	phage protein	J7KBS0	Streptococcus_phage	2.9e-19	87.3
SQH10295.1\|658607_662531_+\|tail	phage tail protein	J7KDT4	Streptococcus_phage	1.9e-238	48.7
SQH10296.1\|662530_663238_+	phage protein	Q938K2	Temperate_phage	1.7e-92	71.1
SQH10297.1\|663234_663864_+	Phage endopeptidase	Q938K1	Temperate_phage	2.0e-113	97.6
SQH10298.1\|663969_665379_+	Phage endopeptidase	Q938K1	Temperate_phage	1.3e-245	91.3
SQH10299.1\|665375_666398_+	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.2e-168	91.7
SQH10300.1\|666410_668297_+	gp58-like family protein	Q938J9	Temperate_phage	1.3e-203	86.5
SQH10301.1\|668308_668737_+	phage protein	A3F661	Streptococcus_phage	1.7e-63	86.5
SQH10302.1\|668739_669378_+	phage protein	A3F662	Streptococcus_phage	1.2e-44	53.7
SQH10303.1\|669387_669663_+\|holin	phage holin	A7J2B2	Streptococcus_phage	2.6e-41	100.0
SQH10304.1\|669659_669887_+	phage protein	A7J2B3	Streptococcus_phage	2.0e-31	100.0
SQH10305.1\|669895_670006_+	phage membrane protein	A7J2B4	Streptococcus_phage	1.9e-08	86.1
SQH10306.1\|670002_671211_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	8.6e-214	86.8
SQH10307.1\|671350_671875_+	phage protein	Q938J3	Temperate_phage	4.0e-99	100.0
SQH10308.1\|671862_672729_+	phage protein	Q938J2	Temperate_phage	3.7e-134	100.0
SQH10309.1\|673033_673813_+	Exotoxin type C precursor	Q938J1	Temperate_phage	5.4e-145	100.0
SQH10310.1\|674288_674864_+	phospholipase A2 SlaA	Q938J0	Temperate_phage	1.7e-111	100.0
SQH10311.1\|674857_675145_+	phage membrane protein	Q938I9	Temperate_phage	2.4e-29	100.0
SQH10312.1\|675209_675392_+	paratox	A3F673	Streptococcus_phage	1.4e-19	76.7
SQH10313.1\|675921_677784_+	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	1.6e-89	33.7
SQH10314.1\|678083_679019_-	dihydroorotate dehydrogenase 1A	A0A1V0SH91	Hokovirus	7.9e-66	45.1
SQH10315.1\|679257_679953_+	phosphoglyceromutase	NA	NA	NA	NA
679753:679770	attL	NA	NA	NA	NA
SQH10316.1\|680061_680583_+	3H domain-containing protein	NA	NA	NA	NA
SQH10317.1\|680743_681286_+	membrane protein	NA	NA	NA	NA
SQH10318.1\|681409_682189_+	formate transporter	NA	NA	NA	NA
SQH10319.1\|682987_683584_+	recombination protein	NA	NA	NA	NA
SQH10320.1\|683684_684731_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
SQH10321.1\|684921_686313_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
SQH10322.1\|686392_687088_+	integral membrane family protein	NA	NA	NA	NA
SQH10323.1\|687335_688880_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.4e-35	29.1
SQH10324.1\|689186_690806_+	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.0e-60	36.8
SQH10325.1\|690933_692934_+	Kup system potassium uptake protein	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	2.2e-65	33.8
SQH10326.1\|692957_693236_-	GIY-YIG catalytic domain-containing protein	W8W2G4	Invertebrate_iridovirus	1.8e-05	36.0
SQH10327.1\|693225_694080_-	methyltransferase	NA	NA	NA	NA
SQH10328.1\|694119_694860_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQH10329.1\|695059_695722_+	comE operon 1 domain-containing protein	NA	NA	NA	NA
SQH10330.1\|695702_697946_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.8e-55	59.2
SQH10331.1\|698016_699057_+	DNA polymerase III subunit delta	NA	NA	NA	NA
SQH10332.1\|699153_699759_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
SQH10333.1\|699925_700153_+	Uncharacterised protein	NA	NA	NA	NA
SQH10334.1\|700137_700386_+	lipoprotein	NA	NA	NA	NA
SQH10335.1\|700382_700973_+	S11 family peptidase	NA	NA	NA	NA
SQH10336.1\|701086_702274_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQH10337.1\|702313_703342_-\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQH10338.1\|703543_704248_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQH10339.1\|704366_705083_+	16S pseudouridylate synthetase	NA	NA	NA	NA
SQH10340.1\|705379_706342_+	competence CoiA-like family protein	NA	NA	NA	NA
SQH10341.1\|706354_708160_+	oligoendopeptidase F	NA	NA	NA	NA
SQH10342.1\|708535_709732_+	major facilitator superfamily protein	NA	NA	NA	NA
SQH10343.1\|709833_710505_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.4e-08	27.2
SQH10344.1\|710567_711623_+	foldase protein prsA 1	NA	NA	NA	NA
SQH10345.1\|712009_714628_+\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	6.7e-62	33.9
SQH10346.1\|714982_715204_+	XRE family transcriptional regulator	NA	NA	NA	NA
SQH10347.1\|715200_715962_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQH10348.1\|715980_716676_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQH10349.1\|716773_716989_-	Transposase	U5P429	Shigella_phage	1.6e-09	43.9
SQH10350.1\|717028_717598_-\|integrase	integrase core domain protein	A0A1P8CWQ3	Bacillus_phage	9.8e-27	38.5
SQH10351.1\|717630_717924_-\|transposase	transposase	NA	NA	NA	NA
726062:726079	attR	NA	NA	NA	NA

DBSCAN-SWA_3

749230 : 803322

Streptococcus_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH10378.1\|749230_750586_+\|tRNA	tRNA (uracil-5-)-methyltransferase	D0R096	Streptococcus_phage	8.0e-253	98.0
SQH10379.1\|750624_750717_+	phosphorylase Pnp/Udp family protein	NA	NA	NA	NA
SQH10380.1\|750891_751404_+	phosphorylase superfamily protein	F5CA76	Streptococcus_phi-m46.1-like_phage	9.6e-90	95.9
SQH10381.1\|751488_751890_+	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA
SQH10382.1\|751994_753479_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQH10383.1\|753852_755073_+	sugar (and other) transporter family protein	NA	NA	NA	NA
SQH10384.1\|755192_755558_-	thioesterase superfamily protein	NA	NA	NA	NA
SQH10385.1\|755672_756404_+	16S pseudouridylate synthase	NA	NA	NA	NA
SQH10386.1\|756452_757259_-\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	1.5e-65	50.0
SQH10387.1\|757279_757795_-\|transposase	transposase	NA	NA	NA	NA
SQH10388.1\|757918_758026_-	exfoliative toxin	NA	NA	NA	NA
SQH10389.1\|758030_758438_-\|transposase	transposase	NA	NA	NA	NA
SQH10390.1\|758438_759164_-\|transposase	transposase	NA	NA	NA	NA
SQH10391.1\|759362_759491_+	membrane protein	NA	NA	NA	NA
SQH10392.1\|759547_760861_+	GTPase ObgE	NA	NA	NA	NA
SQH10393.1\|760929_761088_+	hypothetical cytosolic protein	NA	NA	NA	NA
SQH10394.1\|761092_761788_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA
SQH10395.1\|762012_763413_+	beta-glucosidase	NA	NA	NA	NA
SQH10396.1\|763421_764516_+	outer surface protein	NA	NA	NA	NA
SQH10397.1\|764621_766616_+	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA
SQH10398.1\|766638_766950_+	PTS system cellobiose-specific component IIB	NA	NA	NA	NA
SQH10399.1\|766952_767288_+	PTS system cellobiose-specific transporter subunit IIA	NA	NA	NA	NA
SQH10400.1\|767284_767734_+	Domain of uncharacterised function (DUF3284)	NA	NA	NA	NA
SQH10401.1\|767911_769291_+	PTS system cellobiose-specific transporter subunit IIC	NA	NA	NA	NA
SQH10402.1\|769586_770327_-	glutamine transport ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	1.2e-35	42.1
SQH10403.1\|770326_772501_-	glutamine-binding protein/glutamine transpor tsystem permease protein	NA	NA	NA	NA
SQH10404.1\|772693_774685_+	excinuclease ABC subunit B	NA	NA	NA	NA
SQH10405.1\|774948_775092_+	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA
SQH10406.1\|775103_776642_+	D-alanine--poly(phosphoribitol) ligase subunit 1	A0A2K9KZV5	Tupanvirus	8.5e-41	28.2
SQH10407.1\|776638_777895_+	Protein dltB	NA	NA	NA	NA
SQH10408.1\|777912_778152_+	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA
SQH10409.1\|778144_779395_+	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA
SQH10410.1\|779425_780409_+	alpha/beta fold family hydrolase	NA	NA	NA	NA
SQH10411.1\|780987_781629_-\|transposase	transposase for insertion-like sequence element IS1161	NA	NA	NA	NA
SQH10412.1\|782091_782928_-	maltose transport system permease	NA	NA	NA	NA
SQH10413.1\|782927_784289_-	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA
SQH10414.1\|784562_785810_-	maltose/maltodextrin-binding protein	NA	NA	NA	NA
SQH10415.1\|786054_787074_+	LacI family transcription regulator	C6ZCU4	Enterobacteria_phage	1.6e-16	27.5
SQH10416.1\|787188_788682_+	4-alpha-glucanotransferase	NA	NA	NA	NA
SQH10417.1\|788716_790981_+	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
SQH10418.1\|791237_791858_-	phage protein	NA	NA	NA	NA
SQH10419.1\|792598_793213_+	membrane protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
SQH10420.1\|793343_794129_-	ABC transporter permease protein	NA	NA	NA	NA
SQH10421.1\|794138_794837_-	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQH10422.1\|794836_795208_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQH10423.1\|795392_798503_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.4e-119	29.8
SQH10424.1\|798582_799596_+	6-phosphofructokinase	NA	NA	NA	NA
SQH10425.1\|799658_801161_+	pyruvate kinase	NA	NA	NA	NA
SQH10426.1\|801290_801848_+	Signal peptidase I	NA	NA	NA	NA
SQH10427.1\|801860_802667_-	Phage-associated cell wall hydrolase	A0A1X9I5T2	Streptococcus_phage	7.4e-129	91.2
SQH10428.1\|802644_803322_-\|transposase	truncated transposase	A0A1X9I5T2	Streptococcus_phage	5.3e-112	87.9

DBSCAN-SWA_4

1138559 : 1149162

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH10746.1\|1138559_1139702_-	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	4.1e-24	27.0
SQH10747.1\|1139936_1140377_+	membrane protein	NA	NA	NA	NA
SQH10748.1\|1140406_1141675_+	folylpolyglutamate synthase	NA	NA	NA	NA
SQH10749.1\|1141762_1143115_-	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-29	23.8
SQH10750.1\|1143335_1143677_-	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
SQH10751.1\|1143737_1144904_-	chorismate synthase	A0A291AU41	Pandoravirus	5.8e-34	32.8
SQH10752.1\|1144997_1145684_-	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQH10753.1\|1145680_1146844_-	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQH10754.1\|1146951_1149162_+	phosphoglycerol transferase	W6LM83	Streptococcus_phage	8.5e-268	68.9

DBSCAN-SWA_5

1184571 : 1224914

Tupanvirus(20.0%)

protease,transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH10787.1\|1184571_1186977_-\|tRNA	phenylalanyl-tRNA synthetase subunit beta	NA	NA	NA	NA
SQH10788.1\|1187186_1188230_-\|tRNA	phenylalanyl-tRNA synthetase alpha subunit	A0A2K9L3A8	Tupanvirus	4.6e-30	34.3
SQH10789.1\|1188512_1188812_-	DNA-entry nuclease	NA	NA	NA	NA
SQH10790.1\|1188798_1189050_-	DNA-entry nuclease	NA	NA	NA	NA
SQH10791.1\|1189085_1189274_-	epuA protein	NA	NA	NA	NA
SQH10792.1\|1189277_1190549_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQH10793.1\|1190613_1190871_-	membrane protein	NA	NA	NA	NA
SQH10794.1\|1191136_1191553_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
SQH10795.1\|1191565_1192972_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
SQH10796.1\|1193133_1194009_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
SQH10797.1\|1194024_1195533_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
SQH10798.1\|1195548_1196085_-	ATP synthase delta chain	NA	NA	NA	NA
SQH10799.1\|1196084_1196579_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
SQH10800.1\|1196596_1197313_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
SQH10801.1\|1197347_1197545_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
SQH10802.1\|1197936_1198959_-	lipid kinase	A0A1V0SBJ0	Catovirus	3.6e-19	27.9
SQH10803.1\|1198972_1200931_-	NAD-dependent DNA ligase	A0A0K2QQN8	Ralstonia_phage	2.2e-102	34.8
SQH10804.1\|1201902_1204635_-	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA
SQH10805.1\|1205205_1206324_-	ABC transporter	NA	NA	NA	NA
SQH10806.1\|1206320_1207448_-	ABC transporter	NA	NA	NA	NA
SQH10807.1\|1207456_1208380_-	ABC transporter family protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.7e-33	38.1
SQH10808.1\|1208402_1209086_-	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA
SQH10809.1\|1209082_1209754_-\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQH10810.1\|1209728_1211087_-\|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	NA	NA	NA	NA
SQH10811.1\|1211106_1212165_-\|bacteriocin	bacteriocin biosynthesis cyclodehydratase	NA	NA	NA	NA
SQH10812.1\|1212161_1213112_-	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA
SQH10813.1\|1213333_1213495_-\|bacteriocin	bacteriocin protoxin, streptolysin S family protein	NA	NA	NA	NA
SQH10814.1\|1214358_1220634_-	putative extracellular matrix binding protein Epf	NA	NA	NA	NA
SQH10815.1\|1221104_1222646_+	MgaA-like transcriptional regulator	NA	NA	NA	NA
SQH10816.1\|1223252_1223942_+\|transposase	transposase	A0A1X9I619	Streptococcus_phage	1.4e-96	79.8
SQH10817.1\|1224188_1224914_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1324329 : 1381797

Bacillus_phage(20.0%)

terminase,transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH10911.1\|1324329_1324617_-\|terminase	Phage terminase large subunit	M1PSF2	Streptococcus_phage	4.4e-44	90.5
SQH10912.1\|1324695_1325415_+	Uncharacterised protein	NA	NA	NA	NA
SQH10913.1\|1325414_1325645_+	Uncharacterised protein	NA	NA	NA	NA
SQH10914.1\|1325635_1327294_+	ATPase	NA	NA	NA	NA
SQH10915.1\|1327283_1327493_+	vanUG2	A0A2K5B263	Erysipelothrix_phage	1.3e-16	61.5
SQH10916.1\|1327594_1328803_-	major facilitator superfamily protein	NA	NA	NA	NA
SQH10917.1\|1328887_1330045_-	UDP-glucose 6-dehydrogenase	M1GX70	Paramecium_bursaria_Chlorella_virus	8.5e-78	41.6
SQH10918.1\|1330736_1331726_-	glycosyl transferase 2 family protein	NA	NA	NA	NA
SQH10919.1\|1331780_1332749_-	serine kinase	NA	NA	NA	NA
SQH10920.1\|1332732_1333932_-	S-adenosylmethionine synthetase family protein	NA	NA	NA	NA
SQH10921.1\|1333941_1334928_-	dehydrogenase	NA	NA	NA	NA
SQH10922.1\|1334920_1335655_-	L-glutamate ligase	NA	NA	NA	NA
SQH10923.1\|1335656_1336493_-	xylose isomerase-like TIM barrel family protein	NA	NA	NA	NA
SQH10924.1\|1336489_1337362_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
SQH10925.1\|1337614_1338487_+	transcriptional regulator	NA	NA	NA	NA
SQH10926.1\|1338739_1342279_-	chromosome segregation protein SMC	NA	NA	NA	NA
SQH10927.1\|1342279_1342972_-	ribonuclease III	M4QMG4	Micromonas_pusilla_virus	6.5e-25	34.7
SQH10928.1\|1343414_1344224_-	metallo-beta-lactamase superfamily protein	A0A2H4J3R0	uncultured_Caudovirales_phage	4.8e-35	37.4
SQH10929.1\|1344227_1345580_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	4.7e-35	35.0
SQH10930.1\|1345572_1346283_-	two-component response regulator	W8CYM9	Bacillus_phage	3.7e-39	39.0
SQH10931.1\|1346444_1347440_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQH10932.1\|1347534_1348782_-	long-chain-fatty-acid--CoA ligase	NA	NA	NA	NA
SQH10933.1\|1348738_1349887_-	Acetyl-CoA acetyltransferase	NA	NA	NA	NA
SQH10934.1\|1350579_1351422_-	ABC transporter permease	NA	NA	NA	NA
SQH10935.1\|1351423_1352242_-	Daunorubicin resistance transmembrane protein	NA	NA	NA	NA
SQH10936.1\|1352243_1353236_-	antibiotic transport system ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	8.2e-13	27.1
SQH10937.1\|1353376_1355320_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	1.0e-120	38.7
SQH10938.1\|1355741_1357076_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
SQH10939.1\|1357077_1358076_-	glycosyltransferase	NA	NA	NA	NA
SQH10940.1\|1358206_1359208_-	Catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
SQH10941.1\|1359381_1360467_+	Xaa-Pro dipeptidase	NA	NA	NA	NA
SQH10942.1\|1360515_1361181_+	NAD(P)H nitroreductase yfkO	NA	NA	NA	NA
SQH10943.1\|1361191_1361569_+	bleomycin resistance protein	NA	NA	NA	NA
SQH10944.1\|1361713_1362640_+	glucosyl transferase family 2	V5USA4	Oenococcus_phage	2.6e-77	47.5
SQH10945.1\|1362850_1363534_+	membrane protein	NA	NA	NA	NA
SQH10946.1\|1363533_1364460_+	membrane protein	NA	NA	NA	NA
SQH10947.1\|1364509_1365157_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
SQH10948.1\|1365272_1365992_-	glutamine cyclotransferase	NA	NA	NA	NA
SQH10949.1\|1365997_1366465_-	ssrA-binding protein	W5RAM5	Staphylococcus_phage	5.7e-41	57.0
SQH10950.1\|1366467_1368798_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.1e-89	39.8
SQH10951.1\|1368894_1369131_-	preprotein translocase subunit	NA	NA	NA	NA
SQH10952.1\|1369319_1370360_-	major facilitator superfamily protein	NA	NA	NA	NA
SQH10953.1\|1370634_1372137_-	ATPase	A0A248XCZ8	Klebsiella_phage	1.5e-74	41.3
SQH10954.1\|1372326_1372920_-	dephospho-CoA kinase	NA	NA	NA	NA
SQH10955.1\|1372916_1373744_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
SQH10956.1\|1373915_1374782_-	transcriptional regulator	NA	NA	NA	NA
SQH10957.1\|1375852_1376122_+	Uncharacterised protein	NA	NA	NA	NA
SQH10958.1\|1376469_1376859_-	histidine kinase	NA	NA	NA	NA
SQH10959.1\|1376960_1377182_-	Uncharacterised protein	NA	NA	NA	NA
SQH10960.1\|1377277_1378027_-	Uncharacterised protein	NA	NA	NA	NA
SQH10961.1\|1378280_1378679_-	Uncharacterised protein	NA	NA	NA	NA
SQH10962.1\|1378913_1379153_-	Uncharacterised protein	NA	NA	NA	NA
SQH10963.1\|1379691_1379892_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQH10964.1\|1379904_1380132_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
SQH10965.1\|1380448_1380871_+\|transposase	transposase	NA	NA	NA	NA
SQH10966.1\|1380867_1381017_+\|transposase	IS1191 transposase	NA	NA	NA	NA
SQH10967.1\|1381354_1381537_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQH10968.1\|1381551_1381797_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA

DBSCAN-SWA_7

1420978 : 1430407

Streptococcus_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH11014.1\|1420978_1421407_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	7.3e-67	87.2
SQH11015.1\|1421384_1422212_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	7.6e-129	90.8
SQH11016.1\|1422327_1422858_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQH11017.1\|1423305_1424058_+	ADP-ribosyltransferase	NA	NA	NA	NA
SQH11018.1\|1424262_1426443_-	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.3e-171	43.3
SQH11019.1\|1426409_1426898_-	nrdI protein	R4JF54	Bacillus_phage	1.3e-11	37.5
SQH11020.1\|1426901_1427915_-	ribonucleotide-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.5e-97	53.7
SQH11021.1\|1428409_1430407_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SHR2	Klosneuvirus	1.3e-86	35.2

DBSCAN-SWA_8

1438748 : 1444784

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH11025.1\|1438748_1439576_+	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	2.9e-128	79.5
SQH11026.1\|1439649_1440006_-	arsenate reductase	M1PLC0	Streptococcus_phage	1.8e-39	65.0
SQH11027.1\|1440306_1440936_+	copper homeostasis protein	NA	NA	NA	NA
SQH11028.1\|1440982_1441375_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQH11029.1\|1441401_1442265_-	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	5.5e-114	74.0
SQH11030.1\|1442269_1442593_-	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQH11031.1\|1442997_1443237_-	Tpl protein	NA	NA	NA	NA
SQH11032.1\|1443255_1444131_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-68	46.6
SQH11033.1\|1444148_1444784_-	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4

DBSCAN-SWA_9

1714294 : 1727359

Streptococcus_phage(72.73%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH11270.1\|1714294_1715086_-	transcriptional regulator	A0A1S5SE31	Streptococcus_phage	7.5e-09	48.5
SQH11271.1\|1715177_1715411_+	transcriptional regulator	NA	NA	NA	NA
SQH11272.1\|1715465_1715873_+	phage protein	A0A1X9I5V7	Streptococcus_phage	1.3e-49	69.4
SQH11273.1\|1715886_1716504_+	pRha family phage regulatory protein	A0A159B6D5	Gordonia_phage	6.3e-11	38.8
SQH11274.1\|1716737_1717070_+	phage protein	NA	NA	NA	NA
SQH11275.1\|1717066_1717261_+	phage protein	NA	NA	NA	NA
SQH11276.1\|1717272_1717635_+	phage protein	NA	NA	NA	NA
SQH11277.1\|1717631_1717961_+	phage protein	NA	NA	NA	NA
SQH11278.1\|1717963_1718236_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	1.6e-19	61.2
SQH11279.1\|1718236_1719094_+	replication protein	A0A1X9I6L2	Streptococcus_phage	2.4e-125	75.2
SQH11280.1\|1719062_1720751_+	phage/plasmid primase, P4 family, C-terminal domain protein	A0A1X9I717	Streptococcus_phage	2.5e-259	82.1
SQH11281.1\|1721037_1721211_+	Uncharacterised protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
SQH11282.1\|1721216_1721390_+	phage protein	NA	NA	NA	NA
SQH11283.1\|1721391_1721901_+	phage protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
SQH11284.1\|1721974_1722463_+	phage protein	A0A1X9I5V2	Streptococcus_phage	2.0e-44	54.3
SQH11285.1\|1722868_1723231_+	phage protein	NA	NA	NA	NA
SQH11286.1\|1723205_1723589_+	phage protein	Q938L8	Temperate_phage	6.4e-14	40.2
SQH11287.1\|1723789_1724407_+	phage protein	NA	NA	NA	NA
SQH11288.1\|1724803_1727359_-	DNA mismatch repair protein mutS	A0A1V0SGG8	Hokovirus	2.3e-43	23.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage