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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS483417 Streptococcus pneumoniae strain NCTC11902 genome assembly, chromosome: 1 1 crisprs DEDDh,PrimPol,cas3,DinG,RT 0 0 15 0

Results visualization

1. LS483417
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483417_1 117013-117108 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18160 : 55819 35 Streptococcus_phage(27.27%) tRNA,integrase,transposase attL 12443:12456|attR 32197:32210
DBSCAN-SWA_2 61804 : 73260 7 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 125636 : 162197 36 Streptococcus_phage(60.0%) bacteriocin,tRNA,transposase NA
DBSCAN-SWA_4 288316 : 412523 115 Streptococcus_phage(33.33%) transposase,holin,integrase,tRNA,protease attL 291265:291281|attR 402058:402074
DBSCAN-SWA_5 429591 : 541448 110 Bacillus_phage(13.64%) transposase,bacteriocin,integrase,tRNA,protease attL 423963:424007|attR 521292:521308
DBSCAN-SWA_6 550841 : 671427 114 Streptococcus_phage(23.08%) transposase,holin,bacteriocin,tRNA,protease NA
DBSCAN-SWA_7 720499 : 832773 107 Streptococcus_phage(12.5%) integrase,transposase,protease,tRNA attL 811068:811110|attR 829812:829854
DBSCAN-SWA_8 843452 : 891383 51 Streptococcus_phage(44.44%) holin,transposase,protease,tRNA NA
DBSCAN-SWA_9 953570 : 1069709 100 Streptococcus_phage(42.86%) transposase,protease,tRNA NA
DBSCAN-SWA_10 1076571 : 1134638 59 Streptococcus_phage(13.33%) bacteriocin,transposase,integrase attL 1073287:1073301|attR 1107502:1107516
DBSCAN-SWA_11 1187046 : 1222283 40 Bacillus_phage(20.0%) holin,transposase NA
DBSCAN-SWA_12 1278331 : 1379671 108 Streptococcus_phage(22.86%) holin,bacteriocin,transposase,tRNA NA
DBSCAN-SWA_13 1448058 : 1512924 69 Streptococcus_phage(30.77%) transposase,protease,tRNA NA
DBSCAN-SWA_14 1978859 : 2050505 56 Klosneuvirus(14.29%) holin,transposase,protease NA
DBSCAN-SWA_15 2071396 : 2080150 9 Streptococcus_phage(33.33%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage