CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483428	Salmonella enterica strain NCTC10436 genome assembly, chromosome: 1	3 crisprs	c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	3	25	14	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483428_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483428_1

1007603-1008485

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

14 spacers

cas3

The CRISPR arrays of LS483428_1

>merge|LS483428|1|1007603-1008485|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGCGGTCTCACTGAGCCGTTTCGAACCTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCCTCCCCCCATCATTACTGGTGTAAACAATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCACCACGACGAGAATCCGCAAACGCTTCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGATTTTCAAGATGCGCGTAACGGTCATTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATCTCCGGAGAGCCGCTCACGGAGGAGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACATTTCTTGGGTGGGAGAGGTTGAGGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTACAAAAAAAGATGTCATGCAACCTTAATTGGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCCATTTACGGGCCTGATAAAAACATTATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATCATCTCAAAAATCGCCACGCTACAGCAGTGTTCCCTGCGCCAGCGGGGATAAACCGATTTAACTCCACTTGGACTGGTTAACGGGGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGATTAGTGCTATGTCTTTTAAACATTTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGAATACACTGTAATCGTGTGGTTATTATGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTACCAATCATCATTCGCCTCGTCATGTTTGTGTGTTCCCCGCGCGAGCGGGGATAAACCGCCAATGCATTATGTAAAATGTATGTTTAGCCCGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>LS483428|1|1|1007603-1008424|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGCGGTCTCACTGAGCCGTTTCGAACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCTCCCCCCATCATTACTGGTGTAAACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACCACGACGAGAATCCGCAAACGCTTCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGATTTTCAAGATGCGCGTAACGGTCATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCTCCGGAGAGCCGCTCACGGAGGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACATTTCTTGGGTGGGAGAGGTTGAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACAAAAAAAGATGTCATGCAACCTTAATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCATTTACGGGCCTGATAAAAACATTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCATCTCAAAAATCGCCACGCTACAGCA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ATTTAACTCCACTTGGACTGGTTAACGGGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTAGTGCTATGTCTTTTAAACATTTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGAATACACTGTAATCGTGTGGTTATTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAATCATCATTCGCCTCGTCATGTTTGT
GTGTTCCCCGCGCGAGCGGGGATAAACCG

>LS483428|1|1|1007603-1008485|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGCGGTCTCACTGAGCCGTTTCGAACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCTCCCCCCATCATTACTGGTGTAAACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACCACGACGAGAATCCGCAAACGCTTCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGATTTTCAAGATGCGCGTAACGGTCATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCTCCGGAGAGCCGCTCACGGAGGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACATTTCTTGGGTGGGAGAGGTTGAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACAAAAAAAGATGTCATGCAACCTTAATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCATTTACGGGCCTGATAAAAACATTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCATCTCAAAAATCGCCACGCTACAGCA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ATTTAACTCCACTTGGACTGGTTAACGGGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTAGTGCTATGTCTTTTAAACATTTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGAATACACTGTAATCGTGTGGTTATTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAATCATCATTCGCCTCGTCATGTTTGT
GTGTTCCCCGCGCGAGCGGGGATAAACCG	CCAATGCATTATGTAAAATGTATGTTTAGCCC
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>LS483428|1|1|1007603-1008485|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGCGGTCTCACTGAGCCGTTTCGAACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCCTCCCCCCATCATTACTGGTGTAAACAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACCACGACGAGAATCCGCAAACGCTTCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGATTTTCAAGATGCGCGTAACGGTCATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCTCCGGAGAGCCGCTCACGGAGGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACATTTCTTGGGTGGGAGAGGTTGAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACAAAAAAAGATGTCATGCAACCTTAATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCATTTACGGGCCTGATAAAAACATTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCATCTCAAAAATCGCCACGCTACAGCA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ATTTAACTCCACTTGGACTGGTTAACGGGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTAGTGCTATGTCTTTTAAACATTTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGAATACACTGTAATCGTGTGGTTATTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAATCATCATTCGCCTCGTCATGTTTGT
GTGTTCCCCGCGCGAGCGGGGATAAACCG	CCAATGCATTATGTAAAATGTATGTTTAGCCC
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
LS483428.1\|SQH39269.1\|998804_1000100_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	gnl\|CDD\|237291
LS483428.1\|SQH39267.1\|994775_995918_+\|Glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
LS483428.1\|SQH39280.1\|1013879_1014614_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483428.1\|SQH39283.1\|1018981_1020028_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LS483428.1\|SQH39281.1\|1014701_1015655_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483428.1\|SQH39270.1\|1000151_1002386_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LS483428.1\|SQH39278.1\|1010259_1012059_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LS483428.1\|SQH39271.1\|1002460_1003252_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LS483428.1\|SQH39284.1\|1020279_1021188_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LS483428.1\|SQH39266.1\|993357_994698_+\|glucarate-dehydratase-1	unknown	unknown	gnl\|CDD\|211799
LS483428.1\|SQH39285.1\|1021197_1022637_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LS483428.1\|SQH39279.1\|1012058_1013771_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LS483428.1\|SQH39276.1\|1008582_1009380_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LS483428.1\|SQH39277.1\|1009469_1009832_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LS483428.1\|SQH39265.1\|991996_993337_+\|glucarate-dehydratase-2	unknown	unknown	gnl\|CDD\|211799
LS483428.1\|SQH39273.1\|1005199_1006498_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483428.1\|SQH39282.1\|1016044_1018066_-\|helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LS483428.1\|SQH39274.1\|1006634_1007306_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LS483428.1\|SQH39272.1\|1003479_1005117_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LS483428.1\|SQH39268.1\|995990_998747_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	unknown	unknown	gnl\|CDD\|236848

Protein	Function_ID	Function_description	E-value
LS483428.1\|SQH39269.1\|998804_1000100_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LS483428.1\|SQH39267.1\|994775_995918_+\|Glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
LS483428.1\|SQH39280.1\|1013879_1014614_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.50909e-136
LS483428.1\|SQH39283.1\|1018981_1020028_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LS483428.1\|SQH39281.1\|1014701_1015655_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483428.1\|SQH39270.1\|1000151_1002386_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LS483428.1\|SQH39278.1\|1010259_1012059_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LS483428.1\|SQH39271.1\|1002460_1003252_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.29016e-157
LS483428.1\|SQH39284.1\|1020279_1021188_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483428.1\|SQH39266.1\|993357_994698_+\|glucarate-dehydratase-1	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
LS483428.1\|SQH39285.1\|1021197_1022637_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483428.1\|SQH39279.1\|1012058_1013771_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483428.1\|SQH39276.1\|1008582_1009380_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.15081e-100
LS483428.1\|SQH39277.1\|1009469_1009832_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LS483428.1\|SQH39265.1\|991996_993337_+\|glucarate-dehydratase-2	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
LS483428.1\|SQH39273.1\|1005199_1006498_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483428.1\|SQH39282.1\|1016044_1018066_-\|helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.01942e-116
LS483428.1\|SQH39274.1\|1006634_1007306_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	5.50081e-155
LS483428.1\|SQH39272.1\|1003479_1005117_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LS483428.1\|SQH39268.1\|995990_998747_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0

>LS483428.1|SQH39274.1|1006634_1007306_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCVHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDNKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483428.1|SQH39273.1|1005199_1006498_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGRKEIKGQA
>LS483428.1|SQH39272.1|1003479_1005117_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>LS483428.1|SQH39271.1|1002460_1003252_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MNQIDRLLNIMQRLRDPEGGCPWDKEQTFASIASYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQTKLEEEMGDLLFAAVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LS483428.1|SQH39270.1|1000151_1002386_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGHLRAEMKNEGVMAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGN
>LS483428.1|SQH39269.1|998804_1000100_+|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MVQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHNAKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPILVPQLETLLPRIRACLVSLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRDEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQSWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>LS483428.1|SQH39268.1|995990_998747_-|BarA-sensory-histidine-kinase-(VarS-/-GacS)
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESVIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNTTAAQCTLDMLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAVSMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCHLNHHAEPLLMDTSKIAMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPAMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPDGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>LS483428.1|SQH39267.1|994775_995918_+|Glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVDVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGLGLETLASIDISGLDKRLSACRIDVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALIRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEERLADADLVITGEGRIDSQTIHGKVPIGVANIAKRHNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALENAAENVRMTARNVAATLKIGPLLR
>LS483428.1|SQH39266.1|993357_994698_+|glucarate-dehydratase-1
MSAQFTTPVVTSMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDEQCDWYRLRHEEAMTPEAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAKRFPNARVTLDPNGAWSLNEAINIGRYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPTKPGLGVELDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR
>LS483428.1|SQH39265.1|991996_993337_+|glucarate-dehydratase-2
MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGVGEAPGGEVIYQTLVDAIPMVLGQEVARLNSVVQRVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGQALNVPVCELLGPGKQRDAVTVLGYLFYIGDRTKTDLPYLESTPGSHEWYRLRHQEALNSDAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPNARITVDPNGAWLLDEAIALCKGLNDVLAYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGKPTAIDTHWIWQEGDCRLTKNPLEIKNGTIAVPDAPGLGVELDWEQVRKAHDAYKKLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH
>LS483428.1|SQH39276.1|1008582_1009380_+|beta-lactamase
MALTIRVLLENHKGAGADKSLRARPGLSLLVQDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMVYTRDPLPIGENFIWSGEIPVVAPETYGIFGGHDAEPDSILDEGVLIYPSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPLTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>LS483428.1|SQH39277.1|1009469_1009832_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LS483428.1|SQH39278.1|1010259_1012059_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMTGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVMVTSTQGEGEPPEEAVALHKFLFSKKAPTLNDTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLERVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAVNEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEVLQWHCELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPAQLDADALVGLLRPLTPRLYSIASSQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRIEEDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAEDAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAKDVEQALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LS483428.1|SQH39279.1|1012058_1013771_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTSQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIVASVPESQKAKIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEAIMAKYGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LS483428.1|SQH39280.1|1013879_1014614_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNDLPKVDRILALAETNAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLINQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVAGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWDHGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483428.1|SQH39281.1|1014701_1015655_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHMLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLYAIIHGQGRGEPGEMEVNVDDMGKIYAFKRLQHLACPAHQDLFNIKMDASQTQFLFMVGDTVISQSKIQDILNISDNAMVASMSKEERQLFLQICEMIGATMTWHPELLQGSVSTLRKEVTSNAQIKAAVYEMMRPAESPDHQLVEWQDPLTENEKSMLACINAGNFDAITQFCKIGYREVQGEVAFSMVHPCISYLLHTYSPLAEFKETNAGFLNKLNQDYNDYHANKMFIDVILENIYLTHERSLHIGKNGCSRNILLA
>LS483428.1|SQH39282.1|1016044_1018066_-|helicase-Cas3
MGSDESQFPLISSTMPLKDYWPLACEKAQRAISTIPPLSQHSHYQSHQALFPFIETLTPLQQLANTLDISAHGPHLIILEDVTGAGKTEAALILTHRLMSTNKGHGLYVGLPTMATANAMYKRLAAAYRALFADNSRPSLILAHGGREMSDAFRQSIWQPVGGTAEDYARDDGNAVSECHAWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSADGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPDQDLLLFHSRFAFTDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDDRQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQYGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLHPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDTGEASYYSKRFGLVG
>LS483428.1|SQH39283.1|1018981_1020028_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFTVILALGVGFILPVQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIAHRYGIAASTNPGRNPSYPKGTGCCNDAEVFDKAGMSVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKALAKAEKTS
>LS483428.1|SQH39284.1|1020279_1021188_+|Sulfate-adenylyltransferase-subunit-2-1
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNQYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LS483428.1|SQH39285.1|1021197_1022637_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNIAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVNVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLMLDVYQQNPVTGGLIFIDRLSNVTVGAGMVRESVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA

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Crispr_ID: LS483428_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483428_2

1018208-1018968

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

12 spacers

cas3

The CRISPR arrays of LS483428_2

>merge|LS483428|2|1018208-1018968|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGATTTTTTCAAGACGAAGGGCGATCGGGGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGTGATTTTAATGATGTGCTGACTACCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGATTATACCGCATTGTCAGGCAGTACGACGTTAGTGTTCCCCGCGCCAGCGGGGATAAATCGGTTATTTGCTTAAAGAGAAGTTGGCGCAGTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCAACAAGTGACTTGCAATAAAATCCGTCCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTTTCAGCAAAAAAACGTATATGAAATATAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTATCTTCAGGAAGCTGGTGGAGCTGGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTGGCATCATCAACGTGCAGGCGCTGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATTGCGTATATCTGGCGCAACCATCCCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAGCGGCGGTAATCTGACCGAGAGACAGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTCGATGAGCACCCTCAGGACGTGATGAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGCAACAAATTAACCCTCACGGTTTCCGTGTGTTCCCCGCGCCAGCGGGGATAGCTAT

>LS483428|2|2|1018208-1018907|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTTTCAAGACGAAGGGCGATCGGGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATACCGCATTGTCAGGCAGTACGACGTTA
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GTTATTTGCTTAAAGAGAAGTTGGCGCAGTAAGTG
TTCCCCGCGCCAGCGGGGATAAACCGTCA	ACAAGTGACTTGCAATAAAATCCGTCCTGGTG
TTCCCCGCGCCAGCGGGGATAAACCGAAT	TTTCAGCAAAAAAACGTATATGAAATATAGTG
TTCCCCGCGCCAGCGGGGATAAACCGCAG	TATCTTCAGGAAGCTGGTGGAGCTGGTACGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCG	GTGGCATCATCAACGTGCAGGCGCTGCTGGTG
TTCCCCGCGCCAGCGGGGATAAACCGAAA	TTGCGTATATCTGGCGCAACCATCCCAGCGTG
TTCCCCGCGCCAGCGGGGATAAACCGCGC	AGCGGCGGTAATCTGACCGAGAGACAGGAGTG
TTCCCCGCGCCAGCGGGGATAAACCGAAT	TCGATGAGCACCCTCAGGACGTGATGAACGTG
TTCCCCGCGCCAGCGGGGATAAACCG

>LS483428|2|2|1018208-1018968|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTTTCAAGACGAAGGGCGATCGGGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATACCGCATTGTCAGGCAGTACGACGTTA
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GTTATTTGCTTAAAGAGAAGTTGGCGCAGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAACAAGTGACTTGCAATAAAATCCGTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTTCAGCAAAAAAACGTATATGAAATATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTATCTTCAGGAAGCTGGTGGAGCTGGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTGGCATCATCAACGTGCAGGCGCTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATTGCGTATATCTGGCGCAACCATCCCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGCGGCGGTAATCTGACCGAGAGACAGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTCGATGAGCACCCTCAGGACGTGATGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGCAACAAATTAACCCTCACGGTTTCCGT
GTGTTCCCCGCGCCAGCGGGGATAGCTAT

>LS483428|2|2|1018208-1018968|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTTTCAAGACGAAGGGCGATCGGGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATACCGCATTGTCAGGCAGTACGACGTTA
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GTTATTTGCTTAAAGAGAAGTTGGCGCAGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAACAAGTGACTTGCAATAAAATCCGTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTTCAGCAAAAAAACGTATATGAAATATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTATCTTCAGGAAGCTGGTGGAGCTGGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTGGCATCATCAACGTGCAGGCGCTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATTGCGTATATCTGGCGCAACCATCCCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGCGGCGGTAATCTGACCGAGAGACAGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTCGATGAGCACCCTCAGGACGTGATGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGCAACAAATTAACCCTCACGGTTTCCGT
GTGTTCCCCGCGCCAGCGGGGATAGCTAT

Protein	Signature genes	Signature genes Name	Protein_function
LS483428.1\|SQH39286.1\|1022623_1023229_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LS483428.1\|SQH39280.1\|1013879_1014614_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483428.1\|SQH39283.1\|1018981_1020028_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LS483428.1\|SQH39281.1\|1014701_1015655_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483428.1\|SQH39279.1\|1012058_1013771_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LS483428.1\|SQH39278.1\|1010259_1012059_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LS483428.1\|SQH39289.1\|1024123_1024834_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LS483428.1\|SQH39292.1\|1026339_1027101_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LS483428.1\|SQH39287.1\|1023279_1023603_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LS483428.1\|SQH39285.1\|1021197_1022637_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LS483428.1\|SQH39275.1\|1007597_1008065_-\|Domain-of-uncharacterised-function-(DUF2825)	unknown	unknown	unknown
LS483428.1\|SQH39276.1\|1008582_1009380_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LS483428.1\|SQH39277.1\|1009469_1009832_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LS483428.1\|SQH39284.1\|1020279_1021188_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LS483428.1\|SQH39273.1\|1005199_1006498_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483428.1\|SQH39290.1\|1024833_1025313_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LS483428.1\|SQH39291.1\|1025309_1026359_+\|tRNA-pseudouridine-13-synthase	unknown	unknown	gnl\|CDD\|234884
LS483428.1\|SQH39274.1\|1006634_1007306_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LS483428.1\|SQH39288.1\|1023793_1024105_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LS483428.1\|SQH39282.1\|1016044_1018066_-\|helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031

Protein	Function_ID	Function_description	E-value
LS483428.1\|SQH39286.1\|1022623_1023229_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	2.29141e-143
LS483428.1\|SQH39280.1\|1013879_1014614_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.50909e-136
LS483428.1\|SQH39283.1\|1018981_1020028_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LS483428.1\|SQH39281.1\|1014701_1015655_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483428.1\|SQH39279.1\|1012058_1013771_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483428.1\|SQH39278.1\|1010259_1012059_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LS483428.1\|SQH39289.1\|1024123_1024834_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.79151e-118
LS483428.1\|SQH39292.1\|1026339_1027101_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
LS483428.1\|SQH39287.1\|1023279_1023603_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.12623e-47
LS483428.1\|SQH39285.1\|1021197_1022637_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483428.1\|SQH39288.1\|1023793_1024105_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
LS483428.1\|SQH39276.1\|1008582_1009380_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.15081e-100
LS483428.1\|SQH39277.1\|1009469_1009832_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LS483428.1\|SQH39284.1\|1020279_1021188_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483428.1\|SQH39273.1\|1005199_1006498_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483428.1\|SQH39290.1\|1024833_1025313_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	2.6737e-104
LS483428.1\|SQH39291.1\|1025309_1026359_+\|tRNA-pseudouridine-13-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LS483428.1\|SQH39274.1\|1006634_1007306_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	5.50081e-155
LS483428.1\|SQH39282.1\|1016044_1018066_-\|helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.01942e-116

>LS483428.1|SQH39282.1|1016044_1018066_-|helicase-Cas3
MGSDESQFPLISSTMPLKDYWPLACEKAQRAISTIPPLSQHSHYQSHQALFPFIETLTPLQQLANTLDISAHGPHLIILEDVTGAGKTEAALILTHRLMSTNKGHGLYVGLPTMATANAMYKRLAAAYRALFADNSRPSLILAHGGREMSDAFRQSIWQPVGGTAEDYARDDGNAVSECHAWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSADGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPDQDLLLFHSRFAFTDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDDRQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQYGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLHPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDTGEASYYSKRFGLVG
>LS483428.1|SQH39281.1|1014701_1015655_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHMLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLYAIIHGQGRGEPGEMEVNVDDMGKIYAFKRLQHLACPAHQDLFNIKMDASQTQFLFMVGDTVISQSKIQDILNISDNAMVASMSKEERQLFLQICEMIGATMTWHPELLQGSVSTLRKEVTSNAQIKAAVYEMMRPAESPDHQLVEWQDPLTENEKSMLACINAGNFDAITQFCKIGYREVQGEVAFSMVHPCISYLLHTYSPLAEFKETNAGFLNKLNQDYNDYHANKMFIDVILENIYLTHERSLHIGKNGCSRNILLA
>LS483428.1|SQH39280.1|1013879_1014614_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNDLPKVDRILALAETNAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLINQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVAGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWDHGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483428.1|SQH39279.1|1012058_1013771_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTSQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIVASVPESQKAKIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEAIMAKYGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LS483428.1|SQH39278.1|1010259_1012059_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMTGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVMVTSTQGEGEPPEEAVALHKFLFSKKAPTLNDTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLERVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAVNEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEVLQWHCELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPAQLDADALVGLLRPLTPRLYSIASSQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRIEEDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAEDAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAKDVEQALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LS483428.1|SQH39277.1|1009469_1009832_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LS483428.1|SQH39276.1|1008582_1009380_+|beta-lactamase
MALTIRVLLENHKGAGADKSLRARPGLSLLVQDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMVYTRDPLPIGENFIWSGEIPVVAPETYGIFGGHDAEPDSILDEGVLIYPSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPLTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>LS483428.1|SQH39275.1|1007597_1008065_-|Domain-of-uncharacterised-function-(DUF2825)
MASVYPRWRGEHQLRLHDIFFCTGLSPLARGTLSSTSPTQEMSRFIPAGAGNTCSSVSGSPEIAVYPRWRGEHIMTVTRILKIGGLSPLARGTREAFADSRRGARFIPAGAGNTLFTPVMMGGGPVYPRWRGEHGGSKRLSETADGLSPLARGTP
>LS483428.1|SQH39274.1|1006634_1007306_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCVHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDNKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483428.1|SQH39273.1|1005199_1006498_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGRKEIKGQA
>LS483428.1|SQH39283.1|1018981_1020028_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFTVILALGVGFILPVQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIAHRYGIAASTNPGRNPSYPKGTGCCNDAEVFDKAGMSVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKALAKAEKTS
>LS483428.1|SQH39284.1|1020279_1021188_+|Sulfate-adenylyltransferase-subunit-2-1
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNQYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LS483428.1|SQH39285.1|1021197_1022637_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNIAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVNVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLMLDVYQQNPVTGGLIFIDRLSNVTVGAGMVRESVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LS483428.1|SQH39286.1|1022623_1023229_+|adenosine-5-phosphosulfate-kinase
MAQHDENVVWHSHPVTVAAREQRHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVQERIGHERFIEIYVDTPLAICEQRDPKGLYKKARAGELRHFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>LS483428.1|SQH39287.1|1023279_1023603_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLAFMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LS483428.1|SQH39288.1|1023793_1024105_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>LS483428.1|SQH39289.1|1024123_1024834_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGMQAVAETQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKTAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPTLVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>LS483428.1|SQH39290.1|1024833_1025313_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPTFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>LS483428.1|SQH39291.1|1025309_1026359_+|tRNA-pseudouridine-13-synthase
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGSLKGNAFTLVLREISDRHDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQREALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>LS483428.1|SQH39292.1|1026339_1027101_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: LS483428_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483428_3

2188051-2188628

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGAGAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRT

9 spacers

The CRISPR arrays of LS483428_3

>merge|LS483428|3|2188051-2188628|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCGCCCCGCATGTACGGGGCTGGAGTTACTTTTTGGTGTTCCCCGCGAGAGCGGGGATAAACCGTATGATCCGGATACAGGCTTATCAGTGACTCTGTGTTCCCCGCGAGAGCGGGGATAAACCGCGAACGCGCAGACCAACGCGGCAGGAGTGCAAGTGTTCCCCGCGAGAGCGGGGATAAACCGGACATAAACCGCCCGGCTGGTCCCCTGTGCCCGTGTTCCCCGCGAGAGCGGGGATAAACCGCTCTCGACCGCTTCATCATAAATTTCACCCACGTGTTCCCCGCGAGAGCGGGGATAAACCGTGATGGATATGGGATTGACGCTGGATAGATCGGTGTTCCCCGCGAGAGCGGGGATAAACCGAAAATGCTTCGTCTTCAGGAGGAAACCTATATGTGTTCCCCGCGAGAGCGGGGATAAACCGTAAGGTGAAATCAACGAGAGGGTTAATAACCAGTGTTCCCCGCGAGAGCGGGGATAAACCGTCGCAGCGTTGAGTGGTGATGTTACTTACACTGTGTTCCCCGCGCGAGCGCTGAGTTTGTG

>LS483428|3|3|2188051-2188567|PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCCCGCATGTACGGGGCTGGAGTTACTTTTTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TATGATCCGGATACAGGCTTATCAGTGACTCT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGAACGCGCAGACCAACGCGGCAGGAGTGCAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GACATAAACCGCCCGGCTGGTCCCCTGTGCCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTCTCGACCGCTTCATCATAAATTTCACCCAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGATGGATATGGGATTGACGCTGGATAGATCG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAAATGCTTCGTCTTCAGGAGGAAACCTATAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAAGGTGAAATCAACGAGAGGGTTAATAACCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG

>LS483428|3|3|2188051-2188628|CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCCCGCATGTACGGGGCTGGAGTTACTTTTTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TATGATCCGGATACAGGCTTATCAGTGACTCT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGAACGCGCAGACCAACGCGGCAGGAGTGCAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GACATAAACCGCCCGGCTGGTCCCCTGTGCCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTCTCGACCGCTTCATCATAAATTTCACCCAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGATGGATATGGGATTGACGCTGGATAGATCG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAAATGCTTCGTCTTCAGGAGGAAACCTATAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAAGGTGAAATCAACGAGAGGGTTAATAACCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCGCAGCGTTGAGTGGTGATGTTACTTACACT
GTGTTCCCCGCGCGAGCGCTGAGTTTGTG

>LS483428|3|3|2188051-2188628|CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCCCGCATGTACGGGGCTGGAGTTACTTTTTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TATGATCCGGATACAGGCTTATCAGTGACTCT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGAACGCGCAGACCAACGCGGCAGGAGTGCAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GACATAAACCGCCCGGCTGGTCCCCTGTGCCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTCTCGACCGCTTCATCATAAATTTCACCCAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGATGGATATGGGATTGACGCTGGATAGATCG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAAATGCTTCGTCTTCAGGAGGAAACCTATAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAAGGTGAAATCAACGAGAGGGTTAATAACCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCGCAGCGTTGAGTGGTGATGTTACTTACACT
GTGTTCCCCGCGCGAGCGCTGAGTTTGTG

Protein	Signature genes	Signature genes Name	Protein_function
LS483428.1\|SQH40400.1\|2194259_2195168_+\|glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|184021
LS483428.1\|SQH40397.1\|2191478_2191937_-\|Protein-YchJ	unknown	unknown	gnl\|CDD\|234966
LS483428.1\|SQH40387.1\|2175155_2176421_+\|invasin	unknown	unknown	gnl\|CDD\|236661
LS483428.1\|SQH40395.1\|2188896_2189496_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276807
LS483428.1\|SQH40390.1\|2179200_2180598_+\|major-facilitator-superfamily-nitrite-extrusion-protein	unknown	unknown	gnl\|CDD\|184994
LS483428.1\|SQH40396.1\|2190585_2191428_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
LS483428.1\|SQH40394.1\|2186970_2187648_+\|respiratory-nitrate-reductase-1-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
LS483428.1\|SQH40398.1\|2192056_2192953_+\|phospholipase,-patatin-family	unknown	unknown	gnl\|CDD\|182352
LS483428.1\|SQH40385.1\|2173880_2174111_+\|cation-transport-regulator	unknown	unknown	gnl\|CDD\|181967
LS483428.1\|SQH40388.1\|2176421_2177072_-\|nitrate/nitrite-response-regulator-protein-NarL	unknown	unknown	gnl\|CDD\|182619
LS483428.1\|SQH40389.1\|2177064_2178861_-\|Nitrate/nitrite-sensor-protein	unknown	unknown	gnl\|CDD\|182581
LS483428.1\|SQH40399.1\|2193043_2194057_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|182652
LS483428.1\|SQH40404.1\|2200217_2200865_+\|membrane-protein	unknown	unknown	gnl\|CDD\|236850
LS483428.1\|SQH40401.1\|2195299_2195713_-\|DNA-binding-protein-h-ns	unknown	unknown	gnl\|CDD\|182858
LS483428.1\|SQH40403.1\|2197062_2199741_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
LS483428.1\|SQH40391.1\|2180985_2184729_+\|respiratory-nitrate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|162434
LS483428.1\|SQH40392.1\|2184725_2186264_+\|respiratory-nitrate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|224063
LS483428.1\|SQH40402.1\|2196250_2196868_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
LS483428.1\|SQH40393.1\|2186260_2186971_+\|respiratory-nitrate-reductase-1-subunit-delta	unknown	unknown	gnl\|CDD\|185014
LS483428.1\|SQH40386.1\|2174466_2174820_-\|Putative-ACR-protein	unknown	unknown	gnl\|CDD\|224470

Protein	Function_ID	Function_description	E-value
LS483428.1\|SQH40400.1\|2194259_2195168_+\|glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
LS483428.1\|SQH40397.1\|2191478_2191937_-\|Protein-YchJ	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	1.35103e-106
LS483428.1\|SQH40387.1\|2175155_2176421_+\|invasin	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
LS483428.1\|SQH40395.1\|2188896_2189496_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	2.95275e-33
LS483428.1\|SQH40390.1\|2179200_2180598_+\|major-facilitator-superfamily-nitrite-extrusion-protein	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
LS483428.1\|SQH40396.1\|2190585_2191428_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	9.83293e-177
LS483428.1\|SQH40394.1\|2186970_2187648_+\|respiratory-nitrate-reductase-1-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	1.0503e-132
LS483428.1\|SQH40398.1\|2192056_2192953_+\|phospholipase,-patatin-family	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
LS483428.1\|SQH40385.1\|2173880_2174111_+\|cation-transport-regulator	gnl\|CDD\|181967	PRK09582, chaB, putative cation transport regulator ChaB.	1.10775e-34
LS483428.1\|SQH40388.1\|2176421_2177072_-\|nitrate/nitrite-response-regulator-protein-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.4655e-141
LS483428.1\|SQH40389.1\|2177064_2178861_-\|Nitrate/nitrite-sensor-protein	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
LS483428.1\|SQH40399.1\|2193043_2194057_+\|regulatory-protein	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
LS483428.1\|SQH40404.1\|2200217_2200865_+\|membrane-protein	gnl\|CDD\|236850	PRK11111, PRK11111, YchE family NAAT transporter.	9.59542e-137
LS483428.1\|SQH40401.1\|2195299_2195713_-\|DNA-binding-protein-h-ns	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	4.918e-77
LS483428.1\|SQH40403.1\|2197062_2199741_-\|alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
LS483428.1\|SQH40391.1\|2180985_2184729_+\|respiratory-nitrate-reductase-1-subunit-alpha	gnl\|CDD\|162434	TIGR01580, Respiratory_nitrate_reductase_1_alpha_chain, respiratory nitrate reductase, alpha subunit. The Nitrate reductase enzyme complex allows bacteria to use nitrate as an electron acceptor during anaerobic growth. The enzyme complex consists of a tetramer that has an alpha, beta and 2 gamma subunits. The alpha and beta subunits have catalytic activity and the gamma subunits attach the enzyme to the membrane and is a b-type cytochrome that receives electrons from the quinone pool and transfers them to the beta subunit. This model is specific for the alpha subunit for nitrate reductase I (narG) and nitrate reductase II (narZ) for gram positive and gram negative bacteria.A few thermophiles and archaea also match the model The seed members used to make the model include Nitrate reductases from Pseudomonas fluorescens (GP:11344601), E.coli (SP:P09152) and B.subtilis (SP:P42175). All seed members are experimentally characterized. Some unpublished nitrate reductases, that are shorter sequences, and probably fragments fall in between the noise and trusted cutoffs. Pfam models pfam00384 (Molybdopterin oxidoreductase) and pfam01568(Molydopterin dinucleotide binding domain) will also match the nitrate reductase, alpha subunit. [Energy metabolism, Anaerobic].	0
LS483428.1\|SQH40392.1\|2184725_2186264_+\|respiratory-nitrate-reductase-1-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
LS483428.1\|SQH40402.1\|2196250_2196868_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.6729e-115
LS483428.1\|SQH40393.1\|2186260_2186971_+\|respiratory-nitrate-reductase-1-subunit-delta	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	6.46295e-87
LS483428.1\|SQH40386.1\|2174466_2174820_-\|Putative-ACR-protein	gnl\|CDD\|224470	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism].	3.7796e-50

>LS483428.1|SQH40394.1|2186970_2187648_+|respiratory-nitrate-reductase-1-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPVDVKQKMAMIAGGACGVLTLVGGILLLKRRLFSPRIRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASEHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQLVRARH
>LS483428.1|SQH40393.1|2186260_2186971_+|respiratory-nitrate-reductase-1-subunit-delta
MIELVIVSRLLEYPDAALWQHQQELFDALTSSEHLDKEEVRTLVVFLRDLTAQDILDAQASYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHGLQLDSRELPDHLPLYLEYLAQLPKNEALGGLQDIAPILALLSARLQQRKSRYAVLFDLLLKLANTTIDKGKVAEKIADEVRDDTPQALDAVWEEEQVKFFADQGCNESEIAAHQRRFAGAVAPQYLNITTGGQH
>LS483428.1|SQH40392.1|2184725_2186264_+|respiratory-nitrate-reductase-1-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRALLLGKIFANPHLPGIDDYYEPFDFDYQTLHNAPADSKAQPIARPRSLITGQRMDKITSGPNWEDDLGGEFEKLSKDQNFENMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPAVIEQALKDGVPQSVIDAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVDSLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGKVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHRELARDAFPEKSGCGFTFGDGCHGADSKFNLFNSRRIDAVDVTSKTEPHA
>LS483428.1|SQH40391.1|2180985_2184729_+|respiratory-nitrate-reductase-1-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDSLGQENNPQWKTVAMSSNGEMVAPNGSIGFRWGEKGKWNLEQRDGTTGAETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDNVLLHKLPAKRLQLADGSSALVTTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWAEQITGVPRAQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGTNPLYIAREAEKAGMKPVDYTVKSLKDGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTEHGIQGLDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAELAQPLDVRDWKKGECDLIPGVTAPHIMTVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWISETDAKDLGIEDNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>LS483428.1|SQH40390.1|2179200_2180598_+|major-facilitator-superfamily-nitrite-extrusion-protein
MSHSSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFHFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGRRWTAFSTGILIVPCVWLGVAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANAAWIWVPFLAIFTLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTLPTGGVGGNFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSEERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACIVITWAVYGRHSKNKK
>LS483428.1|SQH40389.1|2177064_2178861_-|Nitrate/nitrite-sensor-protein
MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNAHAVAEDVSRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQPWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAGLEQKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEFTCQSDISCDDKGCHLCPRSALPMINGGTTLKWRLTDSHTQYGILLATLPYGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDNGCGVPENAERSNHYGMIIMRDRAQSLRGDCQVRRRESGGTEVTVTFIPETNFTETQGDTHE
>LS483428.1|SQH40388.1|2176421_2177072_-|nitrate/nitrite-response-regulator-protein-NarL
MNNQEPATILLIDDHPMLRTGVKQLVSMAPDISVVGEASNGEQGIDLAESLDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDVTQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>LS483428.1|SQH40387.1|2175155_2176421_+|invasin
MTPESHEGEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDVNVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNIGVGQRWAQDGWFLGYNTFYDNLLDENLQRAGVGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTVTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQQFQEQ
>LS483428.1|SQH40386.1|2174466_2174820_-|Putative-ACR-protein
MQNIVIIANGAAYGSESLFNSLRLAIALREQESHLDLRLFLMSDAVTAGLRGQKPAEGYNIQQMLEILTAQNVPVKLCKTCADGRGITPLPLIDGVEIGTLVELAQWTLAADKVLTF
>LS483428.1|SQH40385.1|2173880_2174111_+|cation-transport-regulator
MPYKAKSDLPDNVRNVLPAHAQEIYKEAFNSAWEQYKDKADRRDDASREETAHKVAWAAVKNDYEKGEDDKWHKKK
>LS483428.1|SQH40395.1|2188896_2189496_+|tetratricopeptide-repeat-protein
MAKVQYNFGVWYYNGYHLSKDRNLALTWYRKAARQGQPAAQTHPGIMSAFGRGVVQSDRQAIAWYRKAAKHDFAEAQYQLGAAYSTGKGVPENSRNALKWYRKAAEQGFAPAQSALGEIYSHGRQGVPKDNKQAYIWYDMASLYTRKSEDEYLALRAERDRLKETLTPAQLDETYAAFDLIRRKIDQSEAAENVARKKY
>LS483428.1|SQH40396.1|2190585_2191428_-|formyltetrahydrofolate-deformylase
MQSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHETLRSLVERFEIPFELVSHEGLTREEHDRKMADAIDAHQPDYVVLAKYMRVLTPGFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>LS483428.1|SQH40397.1|2191478_2191937_-|Protein-YchJ
MSQPCPCGSADEYSLCCGRIVSGERVAPDPSHLMRSRYCAFVMKDADYLIKSWHPTCNAAAFRDDIIAGFANTRWLGLTIFEHTWSEAENTGYVSFIARFSEQGKTGAIIERSRFIKENGQWYYIDGTRPQLGRNDPCPCGSGKKFKKCCGQ
>LS483428.1|SQH40398.1|2192056_2192953_+|phospholipase,-patatin-family
MKIGLALGSGAARGWSHIGVIKALKQTGIDIDIVAGCSIGSLVGAAYACNKLSALEQWVCSFRYWDVLRLMDVSWGRGGLLRGERVFNHYRDIMPVTDFDHCSRRFGAVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVEHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLLSVNVGNINEESDDSLPWHKRLKERFSSLTSRRGVSSPGAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRAHAAIAAGQLAVEKKMDELIPLVRTDV
>LS483428.1|SQH40399.1|2193043_2194057_+|regulatory-protein
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPELGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVPLGTLGNTYLNQLSQRCDSWQCQIWGAGGRLRLMLSAE
>LS483428.1|SQH40400.1|2194259_2195168_+|glucose-1-phosphate-uridylyltransferase
MAALNSKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGNEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGNSQIMVEPVEDVTAYGVVNCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWALLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNSLGAEFKAWLEDEMGIKK
>LS483428.1|SQH40401.1|2195299_2195713_-|DNA-binding-protein-h-ns
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEEQGKQLEDFLIKE
>LS483428.1|SQH40402.1|2196250_2196868_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNTSLFEEIRAESARQTIHCVLVDESQFLTRQQVYQLSEVVDKLDIPVLCYGLRTDFRGELFVGSQYLLSWSDKLVELKTICFCGRKASMVLRLDQDGRPYNEGEQVVIGGNERYVSVCRKHYKDALEEGSLTAIQERHRHR
>LS483428.1|SQH40403.1|2197062_2199741_-|alcohol-dehydrogenase
MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGITEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYMLQGQELKAVQNVILKNGALNAAIVGQPAYKIAELAGFSVPETTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEEAVEKAEKLVAMGGIGHTSCLYTDQDNQQDRVNYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSVVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGRDFTEGEVAAKKDVVAAPKAEKKAKKSA
>LS483428.1|SQH40404.1|2200217_2200865_+|membrane-protein
MIQTLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTATARNKTNLTANLSVAIILWSSLFLGDGILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAIRESIGVVPLALPLMAGPGAISSTIVWGTRYHNIAHLLGFSVAIALFALCCWGVFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
LS483428_1	1.14\|1008425\|32\|LS483428\|CRISPRCasFinder,CRT	1008425-1008456	32	LS483428.1	1974841-1974872	1.0
LS483428_2	2.1\|1018237\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1018237-1018268	32	LS483428.1	1987950-1987981	1.0
LS483428_3	3.4\|2188263\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188263-2188294	32	LS483428.1	1259261-1259292	1.0

1. spacer 1.14|1008425|32|LS483428|CRISPRCasFinder,CRT matches to position: 1974841-1974872, mismatch: 0, identity: 1.0

ccaatgcattatgtaaaatgtatgtttagccc	CRISPR spacer
ccaatgcattatgtaaaatgtatgtttagccc	Protospacer
********************************

2. spacer 2.1|1018237|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to position: 1987950-1987981, mismatch: 0, identity: 1.0

gattttttcaagacgaagggcgatcggggcaa	CRISPR spacer
gattttttcaagacgaagggcgatcggggcaa	Protospacer
********************************

3. spacer 3.4|2188263|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to position: 1259261-1259292, mismatch: 0, identity: 1.0

gacataaaccgcccggctggtcccctgtgccc	CRISPR spacer
gacataaaccgcccggctggtcccctgtgccc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483428_1	1.13\|1008364\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1008364-1008395	32	KC170283	Uncultured bacterium plasmid pDS1, complete sequence	39558-39589	0	1.0
LS483428_2	2.11\|1018850\|32\|LS483428\|PILER-CR	1018850-1018881	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	27112-27143	0	1.0
LS483428_2	2.19\|1018847\|32\|LS483428\|CRISPRCasFinder,CRT	1018847-1018878	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	27112-27143	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	33329-33360	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	57094-57125	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	50512-50543	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	42447-42478	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	13137-13168	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	33543-33574	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	130535-130566	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	57564-57595	0	1.0
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	42106-42137	0	1.0
LS483428_1	1.13\|1008364\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1008364-1008395	32	NZ_CP023526	Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence	34524-34555	1	0.969
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	82543-82574	2	0.938
LS483428_2	2.11\|1018850\|32\|LS483428\|PILER-CR	1018850-1018881	32	NC_047875	Salmonella phage UPF_BP1, complete genome	713-744	2	0.938
LS483428_2	2.12\|1018420\|32\|LS483428\|CRISPRCasFinder,CRT	1018420-1018451	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	86512-86543	2	0.938
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	82543-82574	2	0.938
LS483428_2	2.19\|1018847\|32\|LS483428\|CRISPRCasFinder,CRT	1018847-1018878	32	NC_047875	Salmonella phage UPF_BP1, complete genome	713-744	2	0.938
LS483428_2	2.4\|1018420\|35\|LS483428\|PILER-CR	1018420-1018454	35	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	86512-86546	4	0.886
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP050069	Klebsiella aerogenes strain 035 plasmid p035_A-VIM-1, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	69297-69328	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KX518745	Escherichia coli strain HYEC7 plasmid pHYEC7-mcr1, complete sequence	3684-3715	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KX928752	Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence	57907-57938	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KX880944	Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence	3551-3582	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP029493	Escherichia coli strain HS30-1 plasmid pHS30-1, complete sequence	4537-4568	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MF679145	Escherichia coli plasmid pBJ114-96, complete sequence	55853-55884	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KX960110	Escherichia coli strain CREC-TJ2 plasmid pCREC-TJ2-NDM, complete sequence	52207-52238	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KU295131	Escherichia coli strain BK28009 plasmid pBK28009, complete sequence	61189-61220	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KU980950	Escherichia coli strain WE-0250 plasmid U2501, complete sequence	25715-25746	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP045829	Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence	4520-4551	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	76792-76823	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010131	Escherichia coli strain C9 plasmid B, complete genome	17715-17746	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010146	Escherichia coli strain D5 plasmid A, complete genome	57548-57579	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010234	Escherichia coli strain S30 plasmid C, complete sequence	55094-55125	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	20753-20784	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP043218	Escherichia coli O80:H26 strain EC-107 plasmid pET6.1-IncY, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP019188	Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 plasmid pATCC10729_02, complete sequence	30421-30452	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP034163	Escherichia albertii strain 06-3542 plasmid p06-3542, complete sequence	17611-17642	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LT882487	Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 plasmid 2	77049-77080	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP044294	Escherichia coli strain P276M plasmid p276M-CTX-M-55, complete sequence	9492-9523	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010173	Escherichia coli strain H8 plasmid A, complete sequence	35837-35868	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP046430	Salmonella enterica strain R19.2839 plasmid pR19.2839_83k, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010179	Escherichia coli strain H15 plasmid A, complete genome	13931-13962	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LT905089	Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1	85583-85614	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP034959	Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP040574	Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 plasmid unnamed, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021846	Escherichia coli strain EC1515 plasmid pEC1515-2, complete sequence	55682-55713	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP026237	Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence	171442-171473	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP020522	Escherichia coli strain 190 plasmid unnamed3, complete sequence	34681-34712	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP047090	Salmonella sp. S13 plasmid pS13-1, complete sequence	94001-94032	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LR130557	Escherichia coli strain MS14385 isolate MS14385 plasmid 3	4522-4553	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP026725	Escherichia coli strain 266917_2 plasmid p266917_2_02, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	83521-83552	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP015997	Escherichia coli strain S51 plasmid pS51_2, complete sequence	71400-71431	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP029181	Escherichia coli strain H9Ecoli plasmid p1-H9, complete sequence	12113-12144	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP019262	Escherichia coli strain 13C1065T plasmid p13C1065T-3, complete sequence	96784-96815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP029244	Escherichia coli strain ECCRA-119 plasmid pTB202, complete sequence	121361-121392	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	33011-33042	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	4737-4768	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	84175-84206	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021336	Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence	84176-84207	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021842	Escherichia coli strain EC974 plasmid pEC974-2, complete sequence	21254-21285	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP009051	Escherichia coli NCCP15648 plasmid p15648-1, complete sequence	54453-54484	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN086777	Escherichia coli plasmid p16EC-p0111, complete sequence	9967-9998	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	84299-84330	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP041960	Escherichia coli strain EC2 plasmid pEC2_5, complete sequence	3754-3785	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP030183	Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence	3620-3651	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP027133	Escherichia coli strain AR_0372 plasmid unnamed4	66059-66090	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	16656-16687	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP038378	Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence	93302-93333	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP025944	Escherichia coli strain SCEC020023 plasmid pOXA10_020023, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	107353-107384	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	35585-35616	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP039843	Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1	22361-22392	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP040928	Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence	148314-148345	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP024832	Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence	52097-52128	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	66865-66896	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP044008	Salmonella enterica subsp. enterica serovar Typhi strain 2018K-0756 plasmid p2018K-0756, complete sequence	68489-68520	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP035313	Escherichia coli strain D72 plasmid pD72-mcr1, complete sequence	37165-37196	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	LC511659	Escherichia coli 2017.15.03CC plasmid p2017.15.03CC DNA, complete genome	3620-3651	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP042894	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_01, complete sequence	54733-54764	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021681	Escherichia coli strain AR_0162 plasmid tig00003056, complete sequence	48351-48382	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP026200	Escherichia coli strain ECONIH6 plasmid pECO-6dfa, complete sequence	36060-36091	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021203	Escherichia coli strain Z1002 plasmid p1002-1, complete sequence	86729-86760	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	31828-31859	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP022733	Escherichia coli strain SA186 plasmid pSA186_4, complete sequence	92483-92514	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP029103	Escherichia coli strain AR437 plasmid unnamed1, complete sequence	8929-8960	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_AP018809	Escherichia coli strain E2865 plasmid pE2865-1, complete sequence	52549-52580	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP019216	Escherichia coli strain WCHEC050613 plasmid p2_050613, complete sequence	56704-56735	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP024817	Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence	81036-81067	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	26662-26693	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP023732	Escherichia coli strain FORC 064 plasmid pFORC64.1, complete sequence	22319-22350	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	33883-33914	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	395956-395987	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010154	Escherichia coli strain D9 plasmid B, complete genome	52335-52366	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP010243	Escherichia coli strain S56 plasmid A, complete sequence	95249-95280	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP031232	Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_2, complete sequence	21609-21640	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP023896	Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence	6949-6980	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	87740-87771	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LR130553	Escherichia coli strain MS14386 isolate MS14386 plasmid 2	55354-55385	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP009168	Escherichia coli 1303 plasmid p1303_95, complete sequence	3883-3914	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP041112	Escherichia coli strain ECCTRSRTH03 plasmid unnamed2, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP046005	Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence	6925-6956	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP033095	Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence	88514-88545	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	33637-33668	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP023381	Escherichia coli strain 127 plasmid p91, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	28230-28261	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP013030	Escherichia coli strain 2012C-4227 plasmid unnamed2, complete sequence	91198-91229	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP020936	Escherichia coli strain HB-Coli0 plasmid unnamed3, complete sequence	36829-36860	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	34699-34730	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	62967-62998	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP030784	Escherichia albertii strain 2012EL-1823B plasmid unnamed1, complete sequence	1806-1837	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	4521-4552	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP040069	Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence	3620-3651	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	53209-53240	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	157753-157784	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP034789	Escherichia coli strain ECCNB20-2 plasmid pTB422, complete sequence	96828-96859	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	AP023222	Escherichia coli M505 plasmid pM505-b DNA, complete genome	75467-75498	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	AP023233	Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome	65837-65868	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NC_017653	Escherichia coli O55:H7 str. RM12579 plasmid p12579_1, complete sequence	54342-54373	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP029688	Escherichia coli strain E706 plasmid pLKJULY7989, complete sequence	147328-147359	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	46360-46391	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LT883139	Escherichia coli isolate 6666666.257727.embl plasmid I	30857-30888	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP047574	Escherichia coli strain 2EC1 plasmid p2EC1-3, complete sequence	17049-17080	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP019054	Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence	14055-14086	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP048027	Escherichia coli strain GZEC065 plasmid pTET-GZEC065, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	407626-407657	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP019075	Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence	34787-34818	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP028125	Escherichia coli O26 str. RM10386 plasmid pRM10386-1, complete sequence	98132-98163	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP041630	Escherichia coli strain PE15 plasmid pPE15-92K, complete sequence	3619-3650	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	49391-49422	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP041922	Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence	94857-94888	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	21553-21584	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP034590	Escherichia coli strain L37 plasmid pL37-2, complete sequence	124665-124696	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP038456	Escherichia coli strain EC-129 plasmid pEC129_3	1099-1130	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP032890	Escherichia coli strain SCEC020022 plasmid pTetA_020022, complete sequence	3618-3649	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	81961-81992	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP033882	Escherichia coli strain 50579417 plasmid p50579417_1, complete sequence	65969-66000	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	77301-77332	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP026938	Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence	87862-87893	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	7841-7872	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	49932-49963	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	10421-10452	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP021734	Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence	19158-19189	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP037905	Escherichia coli strain LHM10-1 plasmid unnamed2, complete sequence	71174-71205	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP016549	Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence	43798-43829	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LT985234	Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence	81478-81509	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	98671-98702	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP031654	Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MK419152	Escherichia coli strain D72C plasmid pD72C, complete sequence	106473-106504	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MK410117	Escherichia coli strain Ec-20Lar plasmid unnamed, complete sequence	3885-3916	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MK455768	Escherichia coli strain Ec-2Lar plasmid pY-Ec2, complete sequence	3885-3916	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	38731-38762	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	51639-51670	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	79814-79845	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MH844525	Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence	37638-37669	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MH580301	Escherichia coli strain 1107 plasmid p1107-99K, complete sequence	97777-97808	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MH781719	Klebsiella pneumoniae strain SCKLB684 plasmid pSCKLB684-mcr, complete sequence	3684-3715	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MK256965	Escherichia coli strain R15 plasmid pR15_MCR-1, complete sequence	3620-3651	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP033251	Escherichia coli strain ECCHD184 plasmid pTB211, complete sequence	4720-4751	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MG196293	Escherichia coli strain SDX5C133 plasmid pHNSD133T1, complete sequence	110453-110484	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MF510423	Escherichia coli strain JAB-1 plasmid pEco-CTX-M-15, complete sequence	47442-47473	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MG825383	Escherichia coli strain 1079 plasmid p1079-IncFIB-N, complete sequence	117619-117650	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MG825379	Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence	3620-3651	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_KY887590	Escherichia coli strain Ec9 plasmid pEc9, complete sequence	164915-164946	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	4521-4552	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_MG860488	Escherichia coli strain 92944 plasmid p92944-TEM, complete sequence	3464-3495	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	27723-27754	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP011063	Escherichia coli str. Sanji plasmid pSJ_98, complete sequence	55904-55935	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP027199	Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence	3784-3815	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP038288	Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence	5162-5193	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MH160767	Escherichia phage vB_EcoM-Ro157c2YLVW, complete genome	48852-48883	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	AF234173	Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant, complete genome	58817-58848	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MH422554	Escherichia phage P1, complete genome	51913-51944	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	X17529	Bacteriophage P7 DNA for par (plasmid partition) region	2909-2940	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NC_050152	Enterobacteria phage P7, complete genome	61535-61566	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NC_005856	Enterobacteria phage P1, complete genome	58817-58848	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	23364-23395	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NC_042128	Escherichia phage RCS47, complete genome	63902-63933	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NC_031129	Salmonella phage SJ46, complete genome	7667-7698	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	K02380	Enterobacteria phage P1 RepA (repA), ParA (parA), and ParB (parB) genes, complete cds; and unknown gene	4789-4820	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	MH445381	Escherichia virus P1, complete genome	21589-21620	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	AF234172	Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome	58817-58848	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP050069	Klebsiella aerogenes strain 035 plasmid p035_A-VIM-1, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	69297-69328	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KX518745	Escherichia coli strain HYEC7 plasmid pHYEC7-mcr1, complete sequence	3684-3715	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KX928752	Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence	57907-57938	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KX880944	Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence	3551-3582	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP029493	Escherichia coli strain HS30-1 plasmid pHS30-1, complete sequence	4537-4568	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MF679145	Escherichia coli plasmid pBJ114-96, complete sequence	55853-55884	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KX960110	Escherichia coli strain CREC-TJ2 plasmid pCREC-TJ2-NDM, complete sequence	52207-52238	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KU295131	Escherichia coli strain BK28009 plasmid pBK28009, complete sequence	61189-61220	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KU980950	Escherichia coli strain WE-0250 plasmid U2501, complete sequence	25715-25746	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP045829	Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence	4520-4551	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	76792-76823	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010131	Escherichia coli strain C9 plasmid B, complete genome	17715-17746	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010146	Escherichia coli strain D5 plasmid A, complete genome	57548-57579	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010234	Escherichia coli strain S30 plasmid C, complete sequence	55094-55125	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	20753-20784	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP043218	Escherichia coli O80:H26 strain EC-107 plasmid pET6.1-IncY, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP019188	Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 plasmid pATCC10729_02, complete sequence	30421-30452	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP034163	Escherichia albertii strain 06-3542 plasmid p06-3542, complete sequence	17611-17642	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LT882487	Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 plasmid 2	77049-77080	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP044294	Escherichia coli strain P276M plasmid p276M-CTX-M-55, complete sequence	9492-9523	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010173	Escherichia coli strain H8 plasmid A, complete sequence	35837-35868	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP046430	Salmonella enterica strain R19.2839 plasmid pR19.2839_83k, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010179	Escherichia coli strain H15 plasmid A, complete genome	13931-13962	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LT905089	Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1	85583-85614	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP034959	Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP040574	Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 plasmid unnamed, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021846	Escherichia coli strain EC1515 plasmid pEC1515-2, complete sequence	55682-55713	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP026237	Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence	171442-171473	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP020522	Escherichia coli strain 190 plasmid unnamed3, complete sequence	34681-34712	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP047090	Salmonella sp. S13 plasmid pS13-1, complete sequence	94001-94032	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LR130557	Escherichia coli strain MS14385 isolate MS14385 plasmid 3	4522-4553	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP026725	Escherichia coli strain 266917_2 plasmid p266917_2_02, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	83521-83552	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP015997	Escherichia coli strain S51 plasmid pS51_2, complete sequence	71400-71431	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP029181	Escherichia coli strain H9Ecoli plasmid p1-H9, complete sequence	12113-12144	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP019262	Escherichia coli strain 13C1065T plasmid p13C1065T-3, complete sequence	96784-96815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP029244	Escherichia coli strain ECCRA-119 plasmid pTB202, complete sequence	121361-121392	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	33011-33042	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	4737-4768	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	84175-84206	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021336	Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence	84176-84207	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021842	Escherichia coli strain EC974 plasmid pEC974-2, complete sequence	21254-21285	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP009051	Escherichia coli NCCP15648 plasmid p15648-1, complete sequence	54453-54484	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN086777	Escherichia coli plasmid p16EC-p0111, complete sequence	9967-9998	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	84299-84330	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP041960	Escherichia coli strain EC2 plasmid pEC2_5, complete sequence	3754-3785	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP030183	Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence	3620-3651	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP027133	Escherichia coli strain AR_0372 plasmid unnamed4	66059-66090	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	16656-16687	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP038378	Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence	93302-93333	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP025944	Escherichia coli strain SCEC020023 plasmid pOXA10_020023, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	107353-107384	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	35585-35616	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP039843	Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1	22361-22392	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP040928	Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence	148314-148345	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP024832	Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence	52097-52128	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	66865-66896	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP044008	Salmonella enterica subsp. enterica serovar Typhi strain 2018K-0756 plasmid p2018K-0756, complete sequence	68489-68520	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP035313	Escherichia coli strain D72 plasmid pD72-mcr1, complete sequence	37165-37196	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	LC511659	Escherichia coli 2017.15.03CC plasmid p2017.15.03CC DNA, complete genome	3620-3651	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP042894	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_01, complete sequence	54733-54764	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021681	Escherichia coli strain AR_0162 plasmid tig00003056, complete sequence	48351-48382	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP026200	Escherichia coli strain ECONIH6 plasmid pECO-6dfa, complete sequence	36060-36091	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021203	Escherichia coli strain Z1002 plasmid p1002-1, complete sequence	86729-86760	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	31828-31859	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP022733	Escherichia coli strain SA186 plasmid pSA186_4, complete sequence	92483-92514	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP029103	Escherichia coli strain AR437 plasmid unnamed1, complete sequence	8929-8960	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_AP018809	Escherichia coli strain E2865 plasmid pE2865-1, complete sequence	52549-52580	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP019216	Escherichia coli strain WCHEC050613 plasmid p2_050613, complete sequence	56704-56735	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP024817	Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence	81036-81067	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	26662-26693	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP023732	Escherichia coli strain FORC 064 plasmid pFORC64.1, complete sequence	22319-22350	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	33883-33914	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	395956-395987	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010154	Escherichia coli strain D9 plasmid B, complete genome	52335-52366	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP010243	Escherichia coli strain S56 plasmid A, complete sequence	95249-95280	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP031232	Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_2, complete sequence	21609-21640	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP023896	Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence	6949-6980	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	87740-87771	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LR130553	Escherichia coli strain MS14386 isolate MS14386 plasmid 2	55354-55385	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP009168	Escherichia coli 1303 plasmid p1303_95, complete sequence	3883-3914	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP041112	Escherichia coli strain ECCTRSRTH03 plasmid unnamed2, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP046005	Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence	6925-6956	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP033095	Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence	88514-88545	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	33637-33668	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP023381	Escherichia coli strain 127 plasmid p91, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	28230-28261	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP013030	Escherichia coli strain 2012C-4227 plasmid unnamed2, complete sequence	91198-91229	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP020936	Escherichia coli strain HB-Coli0 plasmid unnamed3, complete sequence	36829-36860	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	34699-34730	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	62967-62998	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP030784	Escherichia albertii strain 2012EL-1823B plasmid unnamed1, complete sequence	1806-1837	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	4521-4552	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP040069	Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence	3620-3651	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	53209-53240	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	157753-157784	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP034789	Escherichia coli strain ECCNB20-2 plasmid pTB422, complete sequence	96828-96859	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	AP023222	Escherichia coli M505 plasmid pM505-b DNA, complete genome	75467-75498	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	AP023233	Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome	65837-65868	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NC_017653	Escherichia coli O55:H7 str. RM12579 plasmid p12579_1, complete sequence	54342-54373	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP029688	Escherichia coli strain E706 plasmid pLKJULY7989, complete sequence	147328-147359	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	46360-46391	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LT883139	Escherichia coli isolate 6666666.257727.embl plasmid I	30857-30888	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP047574	Escherichia coli strain 2EC1 plasmid p2EC1-3, complete sequence	17049-17080	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP019054	Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence	14055-14086	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP048027	Escherichia coli strain GZEC065 plasmid pTET-GZEC065, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	407626-407657	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP019075	Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence	34787-34818	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP028125	Escherichia coli O26 str. RM10386 plasmid pRM10386-1, complete sequence	98132-98163	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP041630	Escherichia coli strain PE15 plasmid pPE15-92K, complete sequence	3619-3650	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	49391-49422	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP041922	Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence	94857-94888	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	21553-21584	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP034590	Escherichia coli strain L37 plasmid pL37-2, complete sequence	124665-124696	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP038456	Escherichia coli strain EC-129 plasmid pEC129_3	1099-1130	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP032890	Escherichia coli strain SCEC020022 plasmid pTetA_020022, complete sequence	3618-3649	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	81961-81992	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP033882	Escherichia coli strain 50579417 plasmid p50579417_1, complete sequence	65969-66000	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	77301-77332	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP026938	Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence	87862-87893	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	7841-7872	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	49932-49963	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	10421-10452	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP021734	Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence	19158-19189	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP037905	Escherichia coli strain LHM10-1 plasmid unnamed2, complete sequence	71174-71205	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP016549	Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence	43798-43829	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LT985234	Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence	81478-81509	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	98671-98702	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP031654	Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MK419152	Escherichia coli strain D72C plasmid pD72C, complete sequence	106473-106504	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MK410117	Escherichia coli strain Ec-20Lar plasmid unnamed, complete sequence	3885-3916	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MK455768	Escherichia coli strain Ec-2Lar plasmid pY-Ec2, complete sequence	3885-3916	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	38731-38762	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	51639-51670	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	79814-79845	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MH844525	Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence	37638-37669	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MH580301	Escherichia coli strain 1107 plasmid p1107-99K, complete sequence	97777-97808	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MH781719	Klebsiella pneumoniae strain SCKLB684 plasmid pSCKLB684-mcr, complete sequence	3684-3715	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MK256965	Escherichia coli strain R15 plasmid pR15_MCR-1, complete sequence	3620-3651	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP033251	Escherichia coli strain ECCHD184 plasmid pTB211, complete sequence	4720-4751	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MG196293	Escherichia coli strain SDX5C133 plasmid pHNSD133T1, complete sequence	110453-110484	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MF510423	Escherichia coli strain JAB-1 plasmid pEco-CTX-M-15, complete sequence	47442-47473	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MG825383	Escherichia coli strain 1079 plasmid p1079-IncFIB-N, complete sequence	117619-117650	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MG825379	Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence	3620-3651	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_KY887590	Escherichia coli strain Ec9 plasmid pEc9, complete sequence	164915-164946	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	4521-4552	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_MG860488	Escherichia coli strain 92944 plasmid p92944-TEM, complete sequence	3464-3495	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	27723-27754	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP011063	Escherichia coli str. Sanji plasmid pSJ_98, complete sequence	55904-55935	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP027199	Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence	3784-3815	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP038288	Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence	5162-5193	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MH160767	Escherichia phage vB_EcoM-Ro157c2YLVW, complete genome	48852-48883	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	AF234173	Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant, complete genome	58817-58848	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MH422554	Escherichia phage P1, complete genome	51913-51944	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	X17529	Bacteriophage P7 DNA for par (plasmid partition) region	2909-2940	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NC_050152	Enterobacteria phage P7, complete genome	61535-61566	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NC_005856	Enterobacteria phage P1, complete genome	58817-58848	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	23364-23395	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NC_042128	Escherichia phage RCS47, complete genome	63902-63933	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NC_031129	Salmonella phage SJ46, complete genome	7667-7698	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	K02380	Enterobacteria phage P1 RepA (repA), ParA (parA), and ParB (parB) genes, complete cds; and unknown gene	4789-4820	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	MH445381	Escherichia virus P1, complete genome	21589-21620	5	0.844
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	AF234172	Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome	58817-58848	5	0.844
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP034164	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-2, complete sequence	68613-68644	6	0.812
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	MK373793	Escherichia phage vB_EcoS_MM01, complete genome	5056-5087	6	0.812
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP034164	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-2, complete sequence	68613-68644	6	0.812
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	MK373793	Escherichia phage vB_EcoS_MM01, complete genome	5056-5087	6	0.812
LS483428_3	3.7\|2188446\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188446-2188477	32	MT366947	Bacillus phage Hyb2phi3Ts-SPbeta, complete genome	28921-28952	6	0.812
LS483428_3	3.7\|2188446\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188446-2188477	32	KY030782	Bacillus phage phi3T, complete genome	28921-28952	6	0.812
LS483428_3	3.7\|2188446\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188446-2188477	32	MT366948	Bacillus phage Hyb3phi3Ts-SPbeta, complete genome	28921-28952	6	0.812
LS483428_3	3.7\|2188446\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188446-2188477	32	MT366945	Bacillus phage phi3Ts, complete genome	28921-28952	6	0.812
LS483428_1	1.5\|1007876\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007876-1007907	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	81328-81359	7	0.781
LS483428_1	1.5\|1007876\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007876-1007907	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	782118-782149	7	0.781
LS483428_1	1.5\|1007876\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007876-1007907	32	NZ_CP014169	Sphingomonas panacis strain DCY99 plasmid unnamed, complete sequence	286905-286936	7	0.781
LS483428_2	2.5\|1018484\|32\|LS483428\|PILER-CR	1018484-1018515	32	NZ_CP022518	Pantoea vagans strain FBS135 plasmid pPant2, complete sequence	95196-95227	7	0.781
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	NC_027992	Pseudomonas phage JBD25, complete genome	10057-10088	7	0.781
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	MH719192	Pseudomonas phage Ps56, complete genome	10058-10089	7	0.781
LS483428_2	2.13\|1018481\|32\|LS483428\|CRISPRCasFinder,CRT	1018481-1018512	32	NZ_CP022518	Pantoea vagans strain FBS135 plasmid pPant2, complete sequence	95196-95227	7	0.781
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	NC_027992	Pseudomonas phage JBD25, complete genome	10057-10088	7	0.781
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	MH719192	Pseudomonas phage Ps56, complete genome	10058-10089	7	0.781
LS483428_2	2.20\|1018908\|32\|LS483428\|CRISPRCasFinder,CRT	1018908-1018939	32	MG584725	Bacillus phage BVE2, complete genome	15126-15157	7	0.781
LS483428_1	1.4\|1007815\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007815-1007846	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1435049-1435080	8	0.75
LS483428_1	1.7\|1007998\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007998-1008029	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1200411-1200442	8	0.75
LS483428_2	2.3\|1018359\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1018359-1018390	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	608334-608365	8	0.75
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	251789-251820	8	0.75
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	507531-507562	8	0.75
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	NC_019958	Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence	156142-156173	8	0.75
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	MN536027	Pseudomonas phage vB_Pae-SS2019XII, complete genome	34023-34054	8	0.75
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	251789-251820	8	0.75
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	507531-507562	8	0.75
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	NC_019958	Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence	156142-156173	8	0.75
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	MN536027	Pseudomonas phage vB_Pae-SS2019XII, complete genome	34023-34054	8	0.75
LS483428_2	2.20\|1018908\|32\|LS483428\|CRISPRCasFinder,CRT	1018908-1018939	32	GU233956	Bacillus phage 11143, partial sequence	19731-19762	8	0.75
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_CP014276	Martelella sp. AD-3 plasmid unnamed1, complete sequence	111551-111582	8	0.75
LS483428_1	1.1\|1007632\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007632-1007663	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	305340-305371	9	0.719
LS483428_1	1.2\|1007693\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007693-1007724	32	MT074474	Salmonella phage aagejoakim, complete genome	50773-50804	9	0.719
LS483428_2	2.6\|1018545\|32\|LS483428\|PILER-CR	1018545-1018576	32	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	321068-321099	9	0.719
LS483428_2	2.6\|1018545\|32\|LS483428\|PILER-CR	1018545-1018576	32	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	386187-386218	9	0.719
LS483428_2	2.6\|1018545\|32\|LS483428\|PILER-CR	1018545-1018576	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	273520-273551	9	0.719
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	NZ_CP035420	Leisingera sp. NJS204 plasmid unnamed3, complete sequence	122195-122226	9	0.719
LS483428_2	2.8\|1018667\|32\|LS483428\|PILER-CR	1018667-1018698	32	NZ_CP038235	Leisingera sp. NJS201 plasmid unnamed1, complete sequence	126819-126850	9	0.719
LS483428_2	2.14\|1018542\|32\|LS483428\|CRISPRCasFinder,CRT	1018542-1018573	32	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	321068-321099	9	0.719
LS483428_2	2.14\|1018542\|32\|LS483428\|CRISPRCasFinder,CRT	1018542-1018573	32	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	386187-386218	9	0.719
LS483428_2	2.14\|1018542\|32\|LS483428\|CRISPRCasFinder,CRT	1018542-1018573	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	273520-273551	9	0.719
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	NZ_CP035420	Leisingera sp. NJS204 plasmid unnamed3, complete sequence	122195-122226	9	0.719
LS483428_2	2.16\|1018664\|32\|LS483428\|CRISPRCasFinder,CRT	1018664-1018695	32	NZ_CP038235	Leisingera sp. NJS201 plasmid unnamed1, complete sequence	126819-126850	9	0.719
LS483428_2	2.20\|1018908\|32\|LS483428\|CRISPRCasFinder,CRT	1018908-1018939	32	MN172529	Listeria phage LP-039, complete genome	105074-105105	9	0.719
LS483428_2	2.20\|1018908\|32\|LS483428\|CRISPRCasFinder,CRT	1018908-1018939	32	KJ094033	Listeria phage LP-048, complete genome	107531-107562	9	0.719
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	15656-15687	9	0.719
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	MN693866	Marine virus AFVG_250M152, complete genome	1287-1318	9	0.719
LS483428_3	3.5\|2188324\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188324-2188355	32	MN693846	Marine virus AFVG_250M745, complete genome	1228-1259	9	0.719
LS483428_1	1.2\|1007693\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007693-1007724	32	NC_021594	Serratia plymuthica 4Rx13 plasmid p75, complete sequence	4869-4900	10	0.688
LS483428_1	1.5\|1007876\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1007876-1007907	32	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	574733-574764	10	0.688
LS483428_1	1.14\|1008425\|32\|LS483428\|CRISPRCasFinder,CRT	1008425-1008456	32	NZ_CP018299	Photobacterium damselae strain Phdp Wu-1 plasmid plas1, complete sequence	50928-50959	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	336502-336533	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	39277-39308	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	336502-336533	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	246982-247013	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	753397-753428	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP031161	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdII, complete sequence	18602-18633	10	0.688
LS483428_2	2.7\|1018606\|32\|LS483428\|PILER-CR	1018606-1018637	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	350527-350558	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	336502-336533	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	39277-39308	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	336502-336533	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	246982-247013	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	753397-753428	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP031161	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdII, complete sequence	18602-18633	10	0.688
LS483428_2	2.15\|1018603\|32\|LS483428\|CRISPRCasFinder,CRT	1018603-1018634	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	350527-350558	10	0.688
LS483428_3	3.4\|2188263\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	2188263-2188294	32	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1984500-1984531	10	0.688
LS483428_3	3.9\|2188568\|32\|LS483428\|CRISPRCasFinder,CRT	2188568-2188599	32	MF418016	Bacillus phage vB_BceM-HSE3, complete genome	57472-57503	10	0.688

1. spacer 1.13|1008364|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to KC170283 (Uncultured bacterium plasmid pDS1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaccaatcatcattcgcctcgtcatgtttgt	CRISPR spacer
ctaccaatcatcattcgcctcgtcatgtttgt	Protospacer
********************************

2. spacer 2.11|1018850|32|LS483428|PILER-CR matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 0, identity: 1.0

aattcgatgagcaccctcaggacgtgatgaac	CRISPR spacer
aattcgatgagcaccctcaggacgtgatgaac	Protospacer
********************************

3. spacer 2.19|1018847|32|LS483428|CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 0, identity: 1.0

aattcgatgagcaccctcaggacgtgatgaac	CRISPR spacer
aattcgatgagcaccctcaggacgtgatgaac	Protospacer
********************************

4. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

5. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

6. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

7. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

8. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

9. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

10. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

11. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

12. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgaccgcttcatcataaatttcacccac	Protospacer
********************************

13. spacer 1.13|1008364|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023526 (Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

ctaccaatcatcattcgcctcgtcatgtttgt	CRISPR spacer
ctaccaatcatcattcggctcgtcatgtttgt	Protospacer
***************** **************

14. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgacttacaataaaattcgtcctg	Protospacer
**************.*********.*******

15. spacer 2.11|1018850|32|LS483428|PILER-CR matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 2, identity: 0.938

aattcgatgagcaccctcaggacgtgatgaac	CRISPR spacer
aattcgatgagcatccacaggacgtgatgaac	Protospacer
*************.** ***************

16. spacer 2.12|1018420|32|LS483428|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938

gttatttgcttaaagagaagttggcgcagtaa	CRISPR spacer
gttatttgcttaaagagaaattggcacagtaa	Protospacer
*******************.*****.******

17. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgacttacaataaaattcgtcctg	Protospacer
**************.*********.*******

18. spacer 2.19|1018847|32|LS483428|CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 2, identity: 0.938

aattcgatgagcaccctcaggacgtgatgaac	CRISPR spacer
aattcgatgagcatccacaggacgtgatgaac	Protospacer
*************.** ***************

19. spacer 2.4|1018420|35|LS483428|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.886

tcggttatttgcttaaagagaagttggcgcagtaa	CRISPR spacer
aaggttatttgcttaaagagaaattggcacagtaa	Protospacer
  ********************.*****.******

20. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP050069 (Klebsiella aerogenes strain 035 plasmid p035_A-VIM-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

21. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

22. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KX518745 (Escherichia coli strain HYEC7 plasmid pHYEC7-mcr1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

23. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KX928752 (Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

24. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KX880944 (Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

25. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP029493 (Escherichia coli strain HS30-1 plasmid pHS30-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

26. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MF679145 (Escherichia coli plasmid pBJ114-96, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

27. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KX960110 (Escherichia coli strain CREC-TJ2 plasmid pCREC-TJ2-NDM, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

28. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KU295131 (Escherichia coli strain BK28009 plasmid pBK28009, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

29. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KU980950 (Escherichia coli strain WE-0250 plasmid U2501, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

30. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP045829 (Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

31. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

32. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010131 (Escherichia coli strain C9 plasmid B, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

33. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010146 (Escherichia coli strain D5 plasmid A, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

34. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010234 (Escherichia coli strain S30 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

35. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

36. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP043218 (Escherichia coli O80:H26 strain EC-107 plasmid pET6.1-IncY, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

37. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP019188 (Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 plasmid pATCC10729_02, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

38. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP034163 (Escherichia albertii strain 06-3542 plasmid p06-3542, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

39. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LT882487 (Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 plasmid 2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

40. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP044294 (Escherichia coli strain P276M plasmid p276M-CTX-M-55, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

41. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

42. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP046430 (Salmonella enterica strain R19.2839 plasmid pR19.2839_83k, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

43. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010179 (Escherichia coli strain H15 plasmid A, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

44. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LT905089 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

45. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP034959 (Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

46. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP040574 (Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

47. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021846 (Escherichia coli strain EC1515 plasmid pEC1515-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

48. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP026237 (Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

49. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP020522 (Escherichia coli strain 190 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

50. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP047090 (Salmonella sp. S13 plasmid pS13-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

51. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LR130557 (Escherichia coli strain MS14385 isolate MS14385 plasmid 3) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

52. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP026725 (Escherichia coli strain 266917_2 plasmid p266917_2_02, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

53. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

54. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP015997 (Escherichia coli strain S51 plasmid pS51_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

55. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP029181 (Escherichia coli strain H9Ecoli plasmid p1-H9, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

56. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP019262 (Escherichia coli strain 13C1065T plasmid p13C1065T-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

57. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP029244 (Escherichia coli strain ECCRA-119 plasmid pTB202, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

58. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

59. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

60. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021340 (Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

61. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021336 (Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

62. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021842 (Escherichia coli strain EC974 plasmid pEC974-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

63. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP009051 (Escherichia coli NCCP15648 plasmid p15648-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

64. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN086777 (Escherichia coli plasmid p16EC-p0111, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

65. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

66. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP041960 (Escherichia coli strain EC2 plasmid pEC2_5, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

67. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP030183 (Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

68. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP027133 (Escherichia coli strain AR_0372 plasmid unnamed4) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

69. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP040920 (Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

70. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP038378 (Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

71. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP025944 (Escherichia coli strain SCEC020023 plasmid pOXA10_020023, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

72. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

73. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

74. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP039843 (Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

75. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP040928 (Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

76. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP024832 (Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

77. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

78. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP044008 (Salmonella enterica subsp. enterica serovar Typhi strain 2018K-0756 plasmid p2018K-0756, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

79. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP035313 (Escherichia coli strain D72 plasmid pD72-mcr1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

80. spacer 2.5|1018484|32|LS483428|PILER-CR matches to LC511659 (Escherichia coli 2017.15.03CC plasmid p2017.15.03CC DNA, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

81. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP042894 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_01, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

82. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021681 (Escherichia coli strain AR_0162 plasmid tig00003056, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

83. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP026200 (Escherichia coli strain ECONIH6 plasmid pECO-6dfa, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

84. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021203 (Escherichia coli strain Z1002 plasmid p1002-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

85. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

86. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP022733 (Escherichia coli strain SA186 plasmid pSA186_4, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

87. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP029103 (Escherichia coli strain AR437 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

88. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_AP018809 (Escherichia coli strain E2865 plasmid pE2865-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

89. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP019216 (Escherichia coli strain WCHEC050613 plasmid p2_050613, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

90. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP024817 (Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

91. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

92. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

93. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP023732 (Escherichia coli strain FORC 064 plasmid pFORC64.1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

94. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP029117 (Escherichia coli strain AR435 plasmid unnamed4) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

95. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

96. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010154 (Escherichia coli strain D9 plasmid B, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

97. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP010243 (Escherichia coli strain S56 plasmid A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

98. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP031232 (Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

99. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP023896 (Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

100. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

101. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LR130553 (Escherichia coli strain MS14386 isolate MS14386 plasmid 2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

102. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP009168 (Escherichia coli 1303 plasmid p1303_95, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

103. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP041112 (Escherichia coli strain ECCTRSRTH03 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

104. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP046005 (Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

105. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP033095 (Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

106. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP023961 (Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

107. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP023381 (Escherichia coli strain 127 plasmid p91, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

108. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

109. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP013030 (Escherichia coli strain 2012C-4227 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

110. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP020936 (Escherichia coli strain HB-Coli0 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

111. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

112. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

113. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP030784 (Escherichia albertii strain 2012EL-1823B plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

114. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

115. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP040069 (Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

116. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

117. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

118. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP034789 (Escherichia coli strain ECCNB20-2 plasmid pTB422, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

119. spacer 2.5|1018484|32|LS483428|PILER-CR matches to AP023222 (Escherichia coli M505 plasmid pM505-b DNA, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

120. spacer 2.5|1018484|32|LS483428|PILER-CR matches to AP023233 (Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

121. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NC_017653 (Escherichia coli O55:H7 str. RM12579 plasmid p12579_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

122. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP029688 (Escherichia coli strain E706 plasmid pLKJULY7989, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

123. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

124. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LT883139 (Escherichia coli isolate 6666666.257727.embl plasmid I) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

125. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP047574 (Escherichia coli strain 2EC1 plasmid p2EC1-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

126. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP019054 (Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

127. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP048027 (Escherichia coli strain GZEC065 plasmid pTET-GZEC065, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

128. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

129. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP019075 (Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

130. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP028125 (Escherichia coli O26 str. RM10386 plasmid pRM10386-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

131. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP041630 (Escherichia coli strain PE15 plasmid pPE15-92K, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

132. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

133. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP041922 (Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

134. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

135. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP034590 (Escherichia coli strain L37 plasmid pL37-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

136. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP038456 (Escherichia coli strain EC-129 plasmid pEC129_3) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

137. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP032890 (Escherichia coli strain SCEC020022 plasmid pTetA_020022, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

138. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

139. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP033882 (Escherichia coli strain 50579417 plasmid p50579417_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

140. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

141. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

142. spacer 2.5|1018484|32|LS483428|PILER-CR matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

143. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

144. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

145. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP021734 (Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

146. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP037905 (Escherichia coli strain LHM10-1 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

147. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP016549 (Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

148. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LT985234 (Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

149. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

150. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP031654 (Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

151. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MK419152 (Escherichia coli strain D72C plasmid pD72C, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

152. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MK410117 (Escherichia coli strain Ec-20Lar plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

153. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MK455768 (Escherichia coli strain Ec-2Lar plasmid pY-Ec2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

154. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

155. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

156. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

157. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

158. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MH580301 (Escherichia coli strain 1107 plasmid p1107-99K, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

159. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MH781719 (Klebsiella pneumoniae strain SCKLB684 plasmid pSCKLB684-mcr, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

160. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MK256965 (Escherichia coli strain R15 plasmid pR15_MCR-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

161. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP033251 (Escherichia coli strain ECCHD184 plasmid pTB211, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

162. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MG196293 (Escherichia coli strain SDX5C133 plasmid pHNSD133T1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

163. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MF510423 (Escherichia coli strain JAB-1 plasmid pEco-CTX-M-15, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

164. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MG825383 (Escherichia coli strain 1079 plasmid p1079-IncFIB-N, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

165. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

166. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_KY887590 (Escherichia coli strain Ec9 plasmid pEc9, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

167. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

168. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_MG860488 (Escherichia coli strain 92944 plasmid p92944-TEM, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

169. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

170. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP011063 (Escherichia coli str. Sanji plasmid pSJ_98, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

171. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP027199 (Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

172. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP038288 (Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

173. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MH160767 (Escherichia phage vB_EcoM-Ro157c2YLVW, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

174. spacer 2.5|1018484|32|LS483428|PILER-CR matches to AF234173 (Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

175. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

176. spacer 2.5|1018484|32|LS483428|PILER-CR matches to X17529 (Bacteriophage P7 DNA for par (plasmid partition) region) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

177. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

178. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NC_005856 (Enterobacteria phage P1, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

179. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

180. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NC_042128 (Escherichia phage RCS47, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

181. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

182. spacer 2.5|1018484|32|LS483428|PILER-CR matches to K02380 (Enterobacteria phage P1 RepA (repA), ParA (parA), and ParB (parB) genes, complete cds; and unknown gene) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

183. spacer 2.5|1018484|32|LS483428|PILER-CR matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

184. spacer 2.5|1018484|32|LS483428|PILER-CR matches to AF234172 (Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

185. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP050069 (Klebsiella aerogenes strain 035 plasmid p035_A-VIM-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

186. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

187. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KX518745 (Escherichia coli strain HYEC7 plasmid pHYEC7-mcr1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

188. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KX928752 (Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

189. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KX880944 (Escherichia coli strain pMCR-1-P3 plasmid pMCR-1-P3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

190. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP029493 (Escherichia coli strain HS30-1 plasmid pHS30-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

191. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MF679145 (Escherichia coli plasmid pBJ114-96, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

192. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KX960110 (Escherichia coli strain CREC-TJ2 plasmid pCREC-TJ2-NDM, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

193. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KU295131 (Escherichia coli strain BK28009 plasmid pBK28009, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

194. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KU980950 (Escherichia coli strain WE-0250 plasmid U2501, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

195. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP045829 (Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

196. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

197. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010131 (Escherichia coli strain C9 plasmid B, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

198. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010146 (Escherichia coli strain D5 plasmid A, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

199. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010234 (Escherichia coli strain S30 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

200. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

201. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP043218 (Escherichia coli O80:H26 strain EC-107 plasmid pET6.1-IncY, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

202. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP019188 (Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 plasmid pATCC10729_02, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

203. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP034163 (Escherichia albertii strain 06-3542 plasmid p06-3542, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

204. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LT882487 (Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 plasmid 2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

205. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP044294 (Escherichia coli strain P276M plasmid p276M-CTX-M-55, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

206. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

207. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP046430 (Salmonella enterica strain R19.2839 plasmid pR19.2839_83k, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

208. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010179 (Escherichia coli strain H15 plasmid A, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

209. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LT905089 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

210. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP034959 (Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

211. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP040574 (Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

212. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021846 (Escherichia coli strain EC1515 plasmid pEC1515-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

213. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP026237 (Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

214. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP020522 (Escherichia coli strain 190 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

215. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP047090 (Salmonella sp. S13 plasmid pS13-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

216. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LR130557 (Escherichia coli strain MS14385 isolate MS14385 plasmid 3) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

217. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP026725 (Escherichia coli strain 266917_2 plasmid p266917_2_02, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

218. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

219. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP015997 (Escherichia coli strain S51 plasmid pS51_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

220. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP029181 (Escherichia coli strain H9Ecoli plasmid p1-H9, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

221. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP019262 (Escherichia coli strain 13C1065T plasmid p13C1065T-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

222. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP029244 (Escherichia coli strain ECCRA-119 plasmid pTB202, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

223. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

224. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

225. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021340 (Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

226. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021336 (Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

227. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021842 (Escherichia coli strain EC974 plasmid pEC974-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

228. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP009051 (Escherichia coli NCCP15648 plasmid p15648-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

229. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN086777 (Escherichia coli plasmid p16EC-p0111, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

230. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

231. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP041960 (Escherichia coli strain EC2 plasmid pEC2_5, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

232. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP030183 (Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

233. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP027133 (Escherichia coli strain AR_0372 plasmid unnamed4) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

234. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP040920 (Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

235. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP038378 (Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

236. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP025944 (Escherichia coli strain SCEC020023 plasmid pOXA10_020023, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

237. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

238. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

239. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP039843 (Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_1) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

240. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP040928 (Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

241. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP024832 (Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

242. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

243. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP044008 (Salmonella enterica subsp. enterica serovar Typhi strain 2018K-0756 plasmid p2018K-0756, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

244. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP035313 (Escherichia coli strain D72 plasmid pD72-mcr1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

245. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to LC511659 (Escherichia coli 2017.15.03CC plasmid p2017.15.03CC DNA, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

246. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP042894 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_01, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

247. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021681 (Escherichia coli strain AR_0162 plasmid tig00003056, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

248. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP026200 (Escherichia coli strain ECONIH6 plasmid pECO-6dfa, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

249. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021203 (Escherichia coli strain Z1002 plasmid p1002-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

250. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

251. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP022733 (Escherichia coli strain SA186 plasmid pSA186_4, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

252. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP029103 (Escherichia coli strain AR437 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

253. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_AP018809 (Escherichia coli strain E2865 plasmid pE2865-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

254. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP019216 (Escherichia coli strain WCHEC050613 plasmid p2_050613, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

255. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP024817 (Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

256. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

257. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

258. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP023732 (Escherichia coli strain FORC 064 plasmid pFORC64.1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

259. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP029117 (Escherichia coli strain AR435 plasmid unnamed4) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

260. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

261. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010154 (Escherichia coli strain D9 plasmid B, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

262. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP010243 (Escherichia coli strain S56 plasmid A, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

263. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP031232 (Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

264. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP023896 (Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

265. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

266. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LR130553 (Escherichia coli strain MS14386 isolate MS14386 plasmid 2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

267. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP009168 (Escherichia coli 1303 plasmid p1303_95, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

268. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP041112 (Escherichia coli strain ECCTRSRTH03 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

269. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP046005 (Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

270. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP033095 (Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

271. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP023961 (Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

272. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP023381 (Escherichia coli strain 127 plasmid p91, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

273. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

274. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP013030 (Escherichia coli strain 2012C-4227 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

275. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP020936 (Escherichia coli strain HB-Coli0 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

276. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

277. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

278. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP030784 (Escherichia albertii strain 2012EL-1823B plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

279. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

280. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP040069 (Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

281. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

282. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

283. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP034789 (Escherichia coli strain ECCNB20-2 plasmid pTB422, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

284. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to AP023222 (Escherichia coli M505 plasmid pM505-b DNA, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

285. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to AP023233 (Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

286. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NC_017653 (Escherichia coli O55:H7 str. RM12579 plasmid p12579_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

287. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP029688 (Escherichia coli strain E706 plasmid pLKJULY7989, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

288. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

289. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LT883139 (Escherichia coli isolate 6666666.257727.embl plasmid I) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

290. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP047574 (Escherichia coli strain 2EC1 plasmid p2EC1-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

291. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP019054 (Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

292. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP048027 (Escherichia coli strain GZEC065 plasmid pTET-GZEC065, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

293. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

294. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP019075 (Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

295. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP028125 (Escherichia coli O26 str. RM10386 plasmid pRM10386-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

296. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP041630 (Escherichia coli strain PE15 plasmid pPE15-92K, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

297. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

298. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP041922 (Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

299. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

300. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP034590 (Escherichia coli strain L37 plasmid pL37-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

301. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP038456 (Escherichia coli strain EC-129 plasmid pEC129_3) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

302. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP032890 (Escherichia coli strain SCEC020022 plasmid pTetA_020022, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

303. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

304. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP033882 (Escherichia coli strain 50579417 plasmid p50579417_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

305. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

306. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

307. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

308. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

309. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

310. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP021734 (Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

311. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP037905 (Escherichia coli strain LHM10-1 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

312. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP016549 (Escherichia coli strain O177:H21 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

313. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LT985234 (Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

314. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

315. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP031654 (Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

316. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MK419152 (Escherichia coli strain D72C plasmid pD72C, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

317. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MK410117 (Escherichia coli strain Ec-20Lar plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

318. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MK455768 (Escherichia coli strain Ec-2Lar plasmid pY-Ec2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

319. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

320. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

321. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

322. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

323. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MH580301 (Escherichia coli strain 1107 plasmid p1107-99K, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

324. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MH781719 (Klebsiella pneumoniae strain SCKLB684 plasmid pSCKLB684-mcr, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

325. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MK256965 (Escherichia coli strain R15 plasmid pR15_MCR-1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

326. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP033251 (Escherichia coli strain ECCHD184 plasmid pTB211, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

327. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MG196293 (Escherichia coli strain SDX5C133 plasmid pHNSD133T1, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

328. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MF510423 (Escherichia coli strain JAB-1 plasmid pEco-CTX-M-15, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

329. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MG825383 (Escherichia coli strain 1079 plasmid p1079-IncFIB-N, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

330. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

331. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_KY887590 (Escherichia coli strain Ec9 plasmid pEc9, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

332. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

333. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_MG860488 (Escherichia coli strain 92944 plasmid p92944-TEM, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

334. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

335. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP011063 (Escherichia coli str. Sanji plasmid pSJ_98, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

336. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP027199 (Escherichia coli strain WCHEC025943 plasmid p1_025943, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

337. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP038288 (Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

338. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MH160767 (Escherichia phage vB_EcoM-Ro157c2YLVW, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

339. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to AF234173 (Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

340. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

341. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to X17529 (Bacteriophage P7 DNA for par (plasmid partition) region) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

342. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

343. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NC_005856 (Enterobacteria phage P1, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

344. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

345. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NC_042128 (Escherichia phage RCS47, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

346. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

347. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to K02380 (Enterobacteria phage P1 RepA (repA), ParA (parA), and ParB (parB) genes, complete cds; and unknown gene) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

348. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

349. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to AF234172 (Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome) position: , mismatch: 5, identity: 0.844

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgactttcaataaaatctcttccg	Protospacer
************** **********. *.*.*

350. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP034164 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-2, complete sequence) position: , mismatch: 6, identity: 0.812

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgacttttaataaaatctcttccg	Protospacer
************** .*********. *.*.*

351. spacer 2.8|1018667|32|LS483428|PILER-CR matches to MK373793 (Escherichia phage vB_EcoS_MM01, complete genome) position: , mismatch: 6, identity: 0.812

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
catgttgagtcattaacgtgcaggcgctgctg	Protospacer
*  ** * .****.******************

352. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP034164 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-2, complete sequence) position: , mismatch: 6, identity: 0.812

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
tcaacaagtgacttttaataaaatctcttccg	Protospacer
************** .*********. *.*.*

353. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to MK373793 (Escherichia phage vB_EcoS_MM01, complete genome) position: , mismatch: 6, identity: 0.812

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
catgttgagtcattaacgtgcaggcgctgctg	Protospacer
*  ** * .****.******************

354. spacer 3.7|2188446|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to MT366947 (Bacillus phage Hyb2phi3Ts-SPbeta, complete genome) position: , mismatch: 6, identity: 0.812

aaaatgcttcgtcttcaggaggaaacctatat	CRISPR spacer
caaatgctccgtcttcaggaggaaaatgaaat	Protospacer
 *******.**************** . * **

355. spacer 3.7|2188446|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to KY030782 (Bacillus phage phi3T, complete genome) position: , mismatch: 6, identity: 0.812

aaaatgcttcgtcttcaggaggaaacctatat	CRISPR spacer
caaatgctccgtcttcaggaggaaaatgaaat	Protospacer
 *******.**************** . * **

356. spacer 3.7|2188446|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to MT366948 (Bacillus phage Hyb3phi3Ts-SPbeta, complete genome) position: , mismatch: 6, identity: 0.812

aaaatgcttcgtcttcaggaggaaacctatat	CRISPR spacer
caaatgctccgtcttcaggaggaaaatgaaat	Protospacer
 *******.**************** . * **

357. spacer 3.7|2188446|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to MT366945 (Bacillus phage phi3Ts, complete genome) position: , mismatch: 6, identity: 0.812

aaaatgcttcgtcttcaggaggaaacctatat	CRISPR spacer
caaatgctccgtcttcaggaggaaaatgaaat	Protospacer
 *******.**************** . * **

358. spacer 1.5|1007876|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

cgatctccggagagccgctcacggaggagcaa	CRISPR spacer
cgggcgtcggagagccgctccaggaggagcat	Protospacer
**. * .*************  *********

359. spacer 1.5|1007876|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

--cgatctccggagagccgctcacggaggagcaa	CRISPR spacer
atcggaatc--gagggccgctcacggatgagcaa	Protospacer
  **.  **  ***.************ ******

360. spacer 1.5|1007876|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014169 (Sphingomonas panacis strain DCY99 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgatctccggagagccgctcacg-gaggagcaa	CRISPR spacer
cgaaatccggagagccgctcacgcccggcgcg-	Protospacer
***  ******************   ** **.

361. spacer 2.5|1018484|32|LS483428|PILER-CR matches to NZ_CP022518 (Pantoea vagans strain FBS135 plasmid pPant2, complete sequence) position: , mismatch: 7, identity: 0.781

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
gcaacaagtgactggcgataaaattttccctg	Protospacer
 ************ **.*******.. .****

362. spacer 2.8|1018667|32|LS483428|PILER-CR matches to NC_027992 (Pseudomonas phage JBD25, complete genome) position: , mismatch: 7, identity: 0.781

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tgagtgaggtcatcaacctgcaggcgctgctg	Protospacer
. .***. .******** **************

363. spacer 2.8|1018667|32|LS483428|PILER-CR matches to MH719192 (Pseudomonas phage Ps56, complete genome) position: , mismatch: 7, identity: 0.781

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tgagtgaggtcatcaacctgcaggcgctgctg	Protospacer
. .***. .******** **************

364. spacer 2.13|1018481|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP022518 (Pantoea vagans strain FBS135 plasmid pPant2, complete sequence) position: , mismatch: 7, identity: 0.781

tcaacaagtgacttgcaataaaatccgtcctg	CRISPR spacer
gcaacaagtgactggcgataaaattttccctg	Protospacer
 ************ **.*******.. .****

365. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to NC_027992 (Pseudomonas phage JBD25, complete genome) position: , mismatch: 7, identity: 0.781

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tgagtgaggtcatcaacctgcaggcgctgctg	Protospacer
. .***. .******** **************

366. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to MH719192 (Pseudomonas phage Ps56, complete genome) position: , mismatch: 7, identity: 0.781

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tgagtgaggtcatcaacctgcaggcgctgctg	Protospacer
. .***. .******** **************

367. spacer 2.20|1018908|32|LS483428|CRISPRCasFinder,CRT matches to MG584725 (Bacillus phage BVE2, complete genome) position: , mismatch: 7, identity: 0.781

agcagcaacaaattaaccctcacggtttccgt	CRISPR spacer
aggaatataaaattaaccctcactgttttcgt	Protospacer
** *..*  ************** ****.***

368. spacer 1.4|1007815|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.75

ccgattttcaagatgcgcgtaacggtcattat	CRISPR spacer
gcctgtttcaagatgggcgtaacggccattgc	Protospacer
 *   ********** *********.****..

369. spacer 1.7|1007998|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 8, identity: 0.75

gtacaaaaaaagatgtcatgcaaccttaattg	CRISPR spacer
gccggaaaaaagctgtcatgcaaccttcatga	Protospacer
*.  .******* ************** ** .

370. spacer 2.3|1018359|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 8, identity: 0.75

attataccgcattgtcaggcagtacgacgtta	CRISPR spacer
cctgcatcgcattgtcaggcatttcgacgtga	Protospacer
 .*..*.************** * ****** *

371. spacer 2.8|1018667|32|LS483428|PILER-CR matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tctcgggcatcatcaacgtgctggcgctgacc	Protospacer
.*   **************** ******* .

372. spacer 2.8|1018667|32|LS483428|PILER-CR matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
ccggcggcatcaccaacgtgcaggtccgtgcg	Protospacer
****.*******.***********. *   .*

373. spacer 2.8|1018667|32|LS483428|PILER-CR matches to NC_019958 (Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcagg-cgctgctg	CRISPR spacer
tcggtggcatcaagaacgtgcaggacaccacc-	Protospacer
.***********  ********** *.*..*.

374. spacer 2.8|1018667|32|LS483428|PILER-CR matches to MN536027 (Pseudomonas phage vB_Pae-SS2019XII, complete genome) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tgagtgaggtcatcaacctgcaggcgctactg	Protospacer
. .***. .******** **********.***

375. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tctcgggcatcatcaacgtgctggcgctgacc	Protospacer
.*   **************** ******* .

376. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
ccggcggcatcaccaacgtgcaggtccgtgcg	Protospacer
****.*******.***********. *   .*

377. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to NC_019958 (Mycobacterium sp. JS623 plasmid pMYCSM02, complete sequence) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcagg-cgctgctg	CRISPR spacer
tcggtggcatcaagaacgtgcaggacaccacc-	Protospacer
.***********  ********** *.*..*.

378. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to MN536027 (Pseudomonas phage vB_Pae-SS2019XII, complete genome) position: , mismatch: 8, identity: 0.75

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
tgagtgaggtcatcaacctgcaggcgctactg	Protospacer
. .***. .******** **********.***

379. spacer 2.20|1018908|32|LS483428|CRISPRCasFinder,CRT matches to GU233956 (Bacillus phage 11143, partial sequence) position: , mismatch: 8, identity: 0.75

agcagcaacaaattaaccctcacggtttccgt	CRISPR spacer
aggaatttaaaattaatcctcactgtttccgt	Protospacer
** *..   *******.****** ********

380. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014276 (Martelella sp. AD-3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
ctctcgcgcgcttcatcataaattcctgctga	Protospacer
******  ****************.*  *..

381. spacer 1.1|1007632|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 9, identity: 0.719

tccgcggtctcactgagccgtttcgaacctcc	CRISPR spacer
atcgcggtctcactgagcctgttcgcctcctc	Protospacer
 .*****************  ****  .*..*

382. spacer 1.2|1007693|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to MT074474 (Salmonella phage aagejoakim, complete genome) position: , mismatch: 9, identity: 0.719

gtcctccccccatcattactggtgtaaacaat	CRISPR spacer
aaccgtttcccatcataactggtgtaaccaac	Protospacer
. ** ...******** ********** ***.

383. spacer 2.6|1018545|32|LS483428|PILER-CR matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcaaaaaaacgtatatgaaatata	CRISPR spacer
ttttttcagaaagaaaacgtatatgttcaatg	Protospacer
  ******* **.************    **.

384. spacer 2.6|1018545|32|LS483428|PILER-CR matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcaaaaaaacgtatatgaaatata	CRISPR spacer
ttttttcagaaagaaaacgtatatgctcaatg	Protospacer
  ******* **.************    **.

385. spacer 2.6|1018545|32|LS483428|PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcaaaaaaacgtatatgaaatata	CRISPR spacer
ttttttcagaaagaaaacgtatatgttcaatg	Protospacer
  ******* **.************    **.

386. spacer 2.8|1018667|32|LS483428|PILER-CR matches to NZ_CP035420 (Leisingera sp. NJS204 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
cgcgctacaacatcaccgtgcaggcgctgccc	Protospacer
*  *. .** ***** **************.

387. spacer 2.8|1018667|32|LS483428|PILER-CR matches to NZ_CP038235 (Leisingera sp. NJS201 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
cgcgctacaacatcaccgtgcaggcgctgccc	Protospacer
*  *. .** ***** **************.

388. spacer 2.14|1018542|32|LS483428|CRISPRCasFinder,CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcaaaaaaacgtatatgaaatata	CRISPR spacer
ttttttcagaaagaaaacgtatatgttcaatg	Protospacer
  ******* **.************    **.

389. spacer 2.14|1018542|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcaaaaaaacgtatatgaaatata	CRISPR spacer
ttttttcagaaagaaaacgtatatgctcaatg	Protospacer
  ******* **.************    **.

390. spacer 2.14|1018542|32|LS483428|CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcaaaaaaacgtatatgaaatata	CRISPR spacer
ttttttcagaaagaaaacgtatatgttcaatg	Protospacer
  ******* **.************    **.

391. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP035420 (Leisingera sp. NJS204 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
cgcgctacaacatcaccgtgcaggcgctgccc	Protospacer
*  *. .** ***** **************.

392. spacer 2.16|1018664|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP038235 (Leisingera sp. NJS201 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccggtggcatcatcaacgtgcaggcgctgctg	CRISPR spacer
cgcgctacaacatcaccgtgcaggcgctgccc	Protospacer
*  *. .** ***** **************.

393. spacer 2.20|1018908|32|LS483428|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 9, identity: 0.719

agcagcaacaaattaaccctcacggtttccgt	CRISPR spacer
aacagcaacaagttaacccttacgggggacaa	Protospacer
*.*********.********.****    *.

394. spacer 2.20|1018908|32|LS483428|CRISPRCasFinder,CRT matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 9, identity: 0.719

agcagcaacaaattaaccctcacggtttccgt	CRISPR spacer
aacagcaacaagttaacccttacgggggacaa	Protospacer
*.*********.********.****    *.

395. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.719

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
agagttgccgcttcatcgtaaatttcacccat	Protospacer
    . .**********.*************.

396. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to MN693866 (Marine virus AFVG_250M152, complete genome) position: , mismatch: 9, identity: 0.719

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
atctcggccgcttcatcatcaattaaggcaat	Protospacer
 *****.************ ****  . * *.

397. spacer 3.5|2188324|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to MN693846 (Marine virus AFVG_250M745, complete genome) position: , mismatch: 9, identity: 0.719

ctctcgaccgcttcatcataaatttcacccac	CRISPR spacer
atctcggccgcttcatcatcaattaaggcaat	Protospacer
 *****.************ ****  . * *.

398. spacer 1.2|1007693|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NC_021594 (Serratia plymuthica 4Rx13 plasmid p75, complete sequence) position: , mismatch: 10, identity: 0.688

--------gtcctccccccatcattactggtgtaaacaat	CRISPR spacer
taaggacag--------ccagcattacaggtgtaaacaat	Protospacer
        *        *** ****** ************

399. spacer 1.5|1007876|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 10, identity: 0.688

cgatctccggagagccgctcacggaggagcaa	CRISPR spacer
atgaagcaggagagccgctcacggtgcagcag	Protospacer
  .   * **************** * ****.

400. spacer 1.14|1008425|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP018299 (Photobacterium damselae strain Phdp Wu-1 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.688

ccaatgcattatgtaaaatgtatgtttagccc	CRISPR spacer
ttactgcattatgtataatggatgttttagtg	Protospacer
..* *********** **** ****** . .

401. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

402. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

403. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

404. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

405. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

406. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP031161 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdII, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
gtacctcttcaggaagctgatggagttgacaa	Protospacer
  .. **************.*****.**..*

407. spacer 2.7|1018606|32|LS483428|PILER-CR matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

408. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

409. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

410. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

411. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

412. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

413. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP031161 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdII, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
gtacctcttcaggaagctgatggagttgacaa	Protospacer
  .. **************.*****.**..*

414. spacer 2.15|1018603|32|LS483428|CRISPRCasFinder,CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 10, identity: 0.688

cagtatcttcaggaagctggtggagctggtac	CRISPR spacer
aacactcttcaggaagctggttgaggtgtatt	Protospacer
 *   **************** *** **   .

415. spacer 3.4|2188263|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 10, identity: 0.688

gacataaaccgcccggctggtcccctgtgccc	CRISPR spacer
gttccgcgccgctcggctggtcgcctgtgccg	Protospacer
* . .. .****.********* ********

416. spacer 3.9|2188568|32|LS483428|CRISPRCasFinder,CRT matches to MF418016 (Bacillus phage vB_BceM-HSE3, complete genome) position: , mismatch: 10, identity: 0.688

tcgcagcgttgagtggtgatgttacttacact	CRISPR spacer
caccagcgatgagtgctgatgttactgatgac	Protospacer
.  ***** ****** ********** *.. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

513228 : 564343

Enterobacteria_phage(33.33%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH38804.1\|513228_514674_+\|protease	protease TldD	NA	NA	NA	NA
SQH38805.1\|514810_515740_-	LysR family transcriptional regulator	NA	NA	NA	NA
SQH38806.1\|515921_516125_+	electron transfer flavoprotein FixA	NA	NA	NA	NA
SQH38807.1\|516132_517065_+	Fusaric acid resistance protein fusE	NA	NA	NA	NA
SQH38808.1\|517070_519038_+	fusaric acid resistance protein FusB/ fusaricacid resistance protein FusC	NA	NA	NA	NA
SQH38809.1\|519209_519482_+	putative ribonuclease inhibitor	NA	NA	NA	NA
SQH38810.1\|519541_519808_-	membrane protein	NA	NA	NA	NA
SQH38811.1\|519911_520175_-	membrane protein	NA	NA	NA	NA
SQH38812.1\|520538_521009_-	arginine repressor	NA	NA	NA	NA
SQH38813.1\|521423_522362_+	malate dehydrogenase	NA	NA	NA	NA
SQH38814.1\|522437_523508_-\|protease	serine endoprotease	NA	NA	NA	NA
SQH38815.1\|523600_524968_-\|protease	serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	1.0e-21	26.0
SQH38816.1\|525124_525523_-	cytochrome d ubiquinol oxidase subunit III	NA	NA	NA	NA
SQH38817.1\|525715_526840_+	ATP/GTP-binding protein	NA	NA	NA	NA
SQH38818.1\|527141_527570_+	50S ribosomal protein L13	NA	NA	NA	NA
SQH38819.1\|527585_527978_+	30S ribosomal subunit protein S9	NA	NA	NA	NA
SQH38820.1\|527895_528177_-	Uncharacterised protein	NA	NA	NA	NA
SQH38821.1\|528291_528930_+	stringent starvation protein A	NA	NA	NA	NA
SQH38822.1\|528935_529436_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.5e-26	55.8
SQH38823.1\|529553_530336_+	GntR family transcriptional regulator	NA	NA	NA	NA
SQH38824.1\|530470_531364_+	N-acetylneuraminate lyase	NA	NA	NA	NA
SQH38825.1\|531479_532970_+	Sialic acid transporter (permease) NanT	Q6JIH2	Burkholderia_virus	6.4e-09	26.6
SQH38826.1\|533016_533706_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
SQH38827.1\|533702_534578_+	kinase	NA	NA	NA	NA
SQH38828.1\|534574_535042_+	Putative sugar isomerase involved in processing of exogenous sialic acid	NA	NA	NA	NA
SQH38829.1\|535870_536431_+	fimbrial protein	NA	NA	NA	NA
SQH38830.1\|536517_539100_+	fimbrial protein SteB	NA	NA	NA	NA
SQH38831.1\|539117_539867_+	fimbrial chaperone yfcS	NA	NA	NA	NA
SQH38832.1\|539885_540395_+	minor fimbrial subunit	NA	NA	NA	NA
SQH38833.1\|540391_540868_+	fimbrial protein SteE	NA	NA	NA	NA
SQH38834.1\|540867_541407_+	fimbrial protein	NA	NA	NA	NA
SQH38835.1\|541406_542270_+	membrane protein	NA	NA	NA	NA
SQH38836.1\|542310_543591_-	cytosine deaminase	NA	NA	NA	NA
SQH38837.1\|543577_544831_-	cytosine permease	NA	NA	NA	NA
SQH38838.1\|544977_546051_-	Uncharacterized conserved protein	A0A0U2BZN7	Salmonella_phage	2.4e-82	98.7
SQH38839.1\|546257_547676_-	glutamate synthase	NA	NA	NA	NA
SQH38840.1\|547685_552146_-	glutamate synthase subunit alpha	NA	NA	NA	NA
SQH38841.1\|552816_553746_+	putative Fe-S oxidoreductase	A0A2H4PQV5	Staphylococcus_phage	2.0e-16	33.3
SQH38842.1\|553839_556176_+	aerobic respiration control sensor protein ArcB	A0A1V0SGX0	Hokovirus	2.3e-37	30.4
SQH38843.1\|556402_557056_+	Enhancing lycopene biosynthesis protein 2	NA	NA	NA	NA
SQH38844.1\|557052_557781_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
SQH38845.1\|557855_558488_-	PhoP regulatory network protein YrbL	NA	NA	NA	NA
SQH38846.1\|558881_559985_-	Uncharacterised protein	NA	NA	NA	NA
SQH38847.1\|559984_562195_-	Predicted chitinase	NA	NA	NA	NA
SQH38848.1\|562293_562842_-	transposon Tn3 resolvase	Q1MVP4	Enterobacteria_phage	2.8e-79	88.8
SQH38849.1\|563005_563119_+\|transposase	transposase	Q1MVP5	Enterobacteria_phage	1.9e-14	100.0
SQH38850.1\|563179_564343_+\|transposase	transposase Tn21	Q1MVP5	Enterobacteria_phage	4.0e-192	90.7

DBSCAN-SWA_2

680313 : 723271

Cronobacter_phage(67.57%)

tRNA,integrase,terminase,plate,tail,capsid

attL 677326:677341|attR 709892:709907

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
677326:677341	attL	NA	NA	NA	NA
SQH38963.1\|680313_680646_+\|tRNA	methionyl-tRNA synthetase	NA	NA	NA	NA
SQH38964.1\|680740_682120_-	putrescine--2-oxoglutarate aminotransferase	A0A1V0SKB7	Klosneuvirus	6.5e-32	28.3
SQH38965.1\|682549_684070_+	aerotaxis receptor protein	A0A1B0V854	Salmonella_phage	4.5e-34	48.5
SQH38966.1\|684456_686025_+	Methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-13	33.0
SQH38967.1\|686021_686666_-	transcriptional regulator	NA	NA	NA	NA
SQH38968.1\|686901_687669_+	siderophore-interacting protein	NA	NA	NA	NA
SQH38969.1\|687773_687983_-	Protein of uncharacterised function (DUF3828)	NA	NA	NA	NA
SQH38970.1\|688308_688812_-	lipoprotein	NA	NA	NA	NA
SQH38971.1\|689597_689741_+	Uncharacterised protein	NA	NA	NA	NA
SQH38972.1\|689959_690997_-\|integrase	Phage integrase	F1BUS9	Erwinia_phage	2.1e-123	65.3
SQH38973.1\|690983_691877_-	Uncharacterised protein	NA	NA	NA	NA
SQH38974.1\|691905_692487_-	repressor protein	F1BUS8	Erwinia_phage	3.9e-31	39.8
SQH38975.1\|692621_692843_+	Uncharacterised protein	NA	NA	NA	NA
SQH38976.1\|692873_693377_+	phage protein	F1BUN6	Cronobacter_phage	4.5e-60	72.5
SQH38977.1\|693386_693614_+	Uncharacterised protein	NA	NA	NA	NA
SQH38978.1\|693834_694029_+	Uncharacterised protein	NA	NA	NA	NA
SQH38979.1\|694028_694430_+	Uncharacterised protein	F1BUN2	Cronobacter_phage	1.1e-48	66.9
SQH38980.1\|694497_694731_+	bacteriophage protein	NA	NA	NA	NA
SQH38981.1\|694721_695501_+	Eaa protein	H6WRY2	Salmonella_phage	1.7e-37	82.1
SQH38982.1\|695497_695827_+	gp91	Q2P9X4	Enterobacteria_phage	3.0e-12	45.2
SQH38983.1\|695816_696677_+	putative phage gene	F1BUN1	Cronobacter_phage	5.3e-133	83.5
SQH38984.1\|696673_698695_+	Phage replication protein	F1BUM9	Cronobacter_phage	1.1e-298	74.8
SQH38985.1\|698814_699021_+	Uncharacterised protein	NA	NA	NA	NA
SQH38986.1\|698994_699264_-	zinc-finger protein	F1BUM8	Cronobacter_phage	5.1e-42	94.3
SQH38987.1\|699314_700376_-	Membrane protein	F1BUM7	Cronobacter_phage	1.3e-162	77.3
SQH38988.1\|700372_702148_-\|terminase	Phage terminase ATPase subunit	F1BUM5	Cronobacter_phage	1.5e-291	83.6
SQH38989.1\|702308_703109_+\|capsid	putative capsid scaffolding protein	F1BUM4	Cronobacter_phage	3.2e-76	54.8
SQH38990.1\|703170_704193_+\|capsid	Phage major capsid protein	F1BUM2	Cronobacter_phage	1.1e-158	81.2
SQH38991.1\|704196_704901_+\|terminase	phage terminase subunit	F1BUM0	Cronobacter_phage	3.6e-87	67.4
SQH38992.1\|704904_705099_+	Uncharacterised protein	Q8W634	Enterobacteria_phage	3.3e-11	58.6
SQH38993.1\|705144_705648_+	putative phage gene	F1BUL8	Cronobacter_phage	8.9e-64	82.0
SQH38994.1\|705644_706151_+	putative phage gene	F1BUL7	Cronobacter_phage	5.8e-63	69.1
SQH38995.1\|706147_706855_+	Phage virion morphogenesis protein	F1BUL6	Cronobacter_phage	2.0e-101	76.1
SQH38996.1\|706851_707979_+	Topoisomerase IA	F1BUL5	Cronobacter_phage	1.9e-175	83.7
SQH38997.1\|707975_708431_+	phage protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
SQH38998.1\|708440_708734_+	Holin	C7BGD7	Burkholderia_phage	9.8e-15	49.4
SQH38999.1\|708730_709072_+	hypothetical phage-related protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
SQH39000.1\|709071_709404_+	putative phage-related protein	F1BUL2	Cronobacter_phage	6.7e-36	71.8
SQH39001.1\|709550_709808_+	putative phage gene	A5X9I7	Aeromonas_virus	3.6e-21	63.4
SQH39002.1\|709995_711966_+\|tail	Phage-related tail protein	F1BUK9	Cronobacter_phage	1.1e-271	70.2
709892:709907	attR	NA	NA	NA	NA
SQH39003.1\|711962_712292_+	phage protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
SQH39004.1\|712288_713473_+\|plate	Phage baseplate	F1BUK6	Cronobacter_phage	6.1e-180	78.9
SQH39005.1\|713465_714053_+\|tail	Bacteriophage P2-related tail formation protein	F1BUK5	Cronobacter_phage	2.2e-90	82.6
SQH39006.1\|714062_716141_+	gp19	F1BUK3	Cronobacter_phage	2.3e-150	48.5
SQH39007.1\|716158_716686_+	phage protein	A0A0U2QV64	Escherichia_phage	3.1e-51	52.6
SQH39008.1\|716675_717401_+	phage protein	F1BUK1	Cronobacter_phage	1.3e-68	56.8
SQH39009.1\|717372_717918_+	phage protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
SQH39010.1\|717917_719621_+	phage protein	F1BUJ7	Cronobacter_phage	2.9e-223	81.3
SQH39011.1\|720209_720371_-	Uncharacterised protein	NA	NA	NA	NA
SQH39012.1\|720793_721300_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
SQH39013.1\|721423_723271_-	RNA polymerase sigma-70 factor	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7

DBSCAN-SWA_3

1229950 : 1256493

Salmonella_phage(62.07%)

holin,integrase,tail

attL 1219881:1219895|attR 1231972:1231986

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1219881:1219895	attL	NA	NA	NA	NA
SQH39487.1\|1229950_1231180_+\|integrase	integrase	H6WRW7	Salmonella_phage	4.9e-233	94.1
SQH39488.1\|1231157_1231442_-	excisionase-like protein	H6WRW8	Salmonella_phage	3.1e-42	86.2
SQH39489.1\|1231482_1231722_-	putative bacteriophage protein	S4TR31	Salmonella_phage	2.0e-37	100.0
SQH39490.1\|1231764_1232874_-	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	7.1e-207	100.0
1231972:1231986	attR	NA	NA	NA	NA
SQH39491.1\|1232884_1235623_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	73.4
SQH39492.1\|1235749_1236037_-	Gifsy-1 prophage protein	H6WRX2	Salmonella_phage	8.6e-48	98.9
SQH39493.1\|1236121_1236280_-	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	4.5e-22	98.1
SQH39494.1\|1236678_1236885_+	bacteriophage protein	K7P7I0	Enterobacteria_phage	3.7e-16	67.6
SQH39495.1\|1236912_1237854_-	Uncharacterised protein	NA	NA	NA	NA
SQH39496.1\|1237958_1238426_-	DNA-binding protein	K7PHG0	Enterobacteria_phage	1.1e-68	86.5
SQH39497.1\|1238439_1238667_+	phage regulatory protein	K7PKS2	Enterobacteria_phage	1.1e-34	95.9
SQH39498.1\|1238686_1239007_+	Gifsy-1 prophage cI protein	H6WRX6	Salmonella_phage	1.3e-52	100.0
SQH39499.1\|1239097_1240075_+	regulatory protein	H6WRX7	Salmonella_phage	4.1e-158	97.4
SQH39500.1\|1240077_1240827_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	1.6e-138	99.6
SQH39501.1\|1240837_1241170_+	DNA-binding protein	H6WRX9	Salmonella_phage	2.7e-37	69.7
SQH39502.1\|1241422_1241689_+	bacteriophage protein	S4TNF2	Salmonella_phage	1.3e-45	97.7
SQH39503.1\|1241844_1242078_+	Gifsy-1 prophage DinI	H6WRY5	Salmonella_phage	5.6e-37	100.0
SQH39504.1\|1242477_1243080_+	bacteriophage protein	A0A0M4QX23	Salmonella_phage	2.2e-109	98.5
SQH39505.1\|1243079_1243286_+	Phage protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
SQH39506.1\|1243288_1243900_+	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	9.3e-92	99.0
SQH39507.1\|1244032_1244830_+	molecular chaperone	A0A0M4S661	Salmonella_phage	8.0e-152	100.0
SQH39508.1\|1245228_1245576_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.8e-46	80.4
SQH39509.1\|1245578_1246205_+	Phage endolysin	Q858F0	Salmonella_phage	2.7e-94	80.2
SQH39510.1\|1246201_1246750_+\|tail	phage-tail assembly protein	NA	NA	NA	NA
SQH39511.1\|1247038_1248373_+	GDSL-like Lipase/Acylhydrolase	A0A223LJ40	Erwinia_phage	1.4e-119	53.0
SQH39512.1\|1248463_1249438_+	Terminase small subunit	C5IHM0	Burkholderia_virus	5.0e-31	38.9
SQH39513.1\|1249427_1250699_+	Uncharacterised protein	A0A0U2JTW9	Escherichia_phage	3.9e-84	38.3
SQH39514.1\|1250698_1252129_+	Protein of uncharacterised function (DUF1073)	A0A0U2S5X9	Escherichia_phage	6.4e-91	37.3
SQH39515.1\|1252100_1252976_+	Uncharacterised protein	A0A0U2I1R8	Escherichia_phage	5.3e-56	46.2
SQH39516.1\|1252976_1254551_+	nudix hydrolase	Q6UJ14	Burkholderia_virus	1.7e-20	48.6
SQH39517.1\|1254571_1255444_+	Uncharacterised protein	NA	NA	NA	NA
SQH39518.1\|1255461_1256493_+	Uncharacterized protein conserved in bacteria	A0A0U2QQI2	Escherichia_phage	1.5e-73	45.5

DBSCAN-SWA_4

1734321 : 1743497

Enterobacteria_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH39933.1\|1734321_1735269_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-23	30.8
SQH39934.1\|1735252_1735984_+	putative permease transmembrane component	NA	NA	NA	NA
SQH39935.1\|1735964_1736072_-	membrane protein	NA	NA	NA	NA
SQH39936.1\|1736131_1736863_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	1.2e-101	88.4
SQH39937.1\|1736983_1738771_+	putative sensor kinase	B6DZC2	Enterobacteria_phage	1.9e-278	90.3
SQH39938.1\|1738767_1739487_+	two-component system response regulator	NA	NA	NA	NA
SQH39939.1\|1739533_1740001_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	7.9e-75	91.0
SQH39940.1\|1740057_1740588_-	lipoprotein	Q9EYF5	Enterobacteria_phage	1.8e-14	32.3
SQH39941.1\|1740759_1741218_-	lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
SQH39942.1\|1741463_1743497_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	3.6e-55	27.6

DBSCAN-SWA_5

1811385 : 1820175

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH40001.1\|1811385_1812789_+	Colanic acid biosynthesis protein wcaM	A0A291LBB9	Klebsiella_phage	2.0e-20	31.9
SQH40002.1\|1812965_1813859_+	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
SQH40003.1\|1814235_1815321_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.0e-101	53.4
SQH40004.1\|1815320_1816220_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.2e-28	36.0
SQH40005.1\|1816267_1817143_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.3e-107	64.5
SQH40006.1\|1817149_1817707_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.7e-47	55.0
SQH40007.1\|1817703_1818948_+	colanic acid exporter	NA	NA	NA	NA
SQH40008.1\|1818996_1820175_+	Uncharacterised protein	Q9AYY5	Salmonella_phage	6.2e-92	45.5

DBSCAN-SWA_6

1886189 : 1916263

Erwinia_phage(33.33%)

integrase,transposase

attL 1888001:1888015|attR 1916413:1916427

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH40079.1\|1886189_1886321_-\|integrase	integrase	NA	NA	NA	NA
SQH40080.1\|1886750_1888175_+	Multi antimicrobial extrusion protein (MATE)	NA	NA	NA	NA
1888001:1888015	attL	NA	NA	NA	NA
SQH40081.1\|1888555_1889227_+\|integrase	bacteriophage integrase	E5AGD0	Erwinia_phage	5.5e-29	37.3
SQH40082.1\|1889262_1889817_+\|integrase	bacteriophage integrase	A0A1B0VMI6	Pseudomonas_phage	5.2e-25	39.1
SQH40083.1\|1889878_1889968_-	Uncharacterised protein	NA	NA	NA	NA
SQH40084.1\|1890182_1891052_-\|transposase	transposase	NA	NA	NA	NA
SQH40085.1\|1891406_1894004_+	Putative hydroxymethyl transferase	NA	NA	NA	NA
SQH40086.1\|1894181_1895636_+	AMP nucleosidase	NA	NA	NA	NA
SQH40087.1\|1895749_1895905_-	Uncharacterised protein	NA	NA	NA	NA
SQH40088.1\|1895934_1896993_-	TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component	NA	NA	NA	NA
SQH40089.1\|1897143_1897725_-	Uncharacterised protein	NA	NA	NA	NA
SQH40090.1\|1897837_1898716_+	StmR	NA	NA	NA	NA
SQH40091.1\|1899810_1899930_-	Uncharacterised protein	NA	NA	NA	NA
SQH40092.1\|1900039_1900204_-	Uncharacterised protein	NA	NA	NA	NA
SQH40093.1\|1900346_1900520_-\|integrase	integrase	A7X7X0	Dichelobacter_phage	9.3e-05	52.8
SQH40094.1\|1900941_1901358_+	nitrogen assimilation regulatory protein (pseudogene)	NA	NA	NA	NA
SQH40095.1\|1902703_1902913_+	autotransporter	NA	NA	NA	NA
SQH40096.1\|1903336_1905022_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQH40097.1\|1905006_1905678_+	Protein of uncharacterised function (DUF1175)	NA	NA	NA	NA
SQH40098.1\|1905701_1910231_+	MG2 domain	NA	NA	NA	NA
SQH40099.1\|1910234_1911881_+	Predicted secreted protein	NA	NA	NA	NA
SQH40100.1\|1911887_1912658_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQH40101.1\|1912783_1914280_-	dipeptidase	NA	NA	NA	NA
SQH40102.1\|1914952_1915750_-	Putative inner membrane protein	NA	NA	NA	NA
SQH40103.1\|1916017_1916263_-\|integrase	Putative integrase	NA	NA	NA	NA
1916413:1916427	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1963734 : 2050376

108

Salmonella_phage(16.67%)

integrase,tRNA,terminase,plate,tail,head,capsid

attL 1963409:1963424|attR 2033792:2033807

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1963409:1963424	attL	NA	NA	NA	NA
SQH40155.1\|1963734_1964745_-\|integrase	integrase	H9C152	Pectobacterium_phage	3.2e-137	68.5
SQH40156.1\|1965035_1965413_-	Bacterial protein of uncharacterised function (DUF977)	NA	NA	NA	NA
SQH40157.1\|1965409_1965631_-	Uncharacterised protein	NA	NA	NA	NA
SQH40158.1\|1965700_1966579_-	Uncharacterised protein	E7EKU9	Edwardsiella_phage	4.0e-35	42.0
SQH40159.1\|1966681_1966882_-	Uncharacterised protein	NA	NA	NA	NA
SQH40160.1\|1966957_1967146_-	Protein of uncharacterised function (DUF1482)	NA	NA	NA	NA
SQH40161.1\|1967142_1967412_-	Uncharacterised protein	NA	NA	NA	NA
SQH40162.1\|1967507_1967663_-	Protein of uncharacterised function (DUF1391)	NA	NA	NA	NA
SQH40163.1\|1967865_1968363_-	transcriptional repressor DicA	Q7Y5W5	Haemophilus_phage	2.7e-12	41.4
SQH40164.1\|1968411_1968681_+	phage regulatory protein	A0A0M4QX15	Salmonella_phage	2.2e-08	41.0
SQH40165.1\|1968680_1969154_+	Protein of uncharacterised function (DUF1019)	NA	NA	NA	NA
SQH40166.1\|1969970_1970624_+	replication P family protein	A0A0U2JGJ0	Escherichia_phage	2.8e-46	54.9
SQH40167.1\|1970633_1970903_+	Uncharacterised protein	NA	NA	NA	NA
SQH40168.1\|1970889_1971108_+	Uncharacterised protein	NA	NA	NA	NA
SQH40169.1\|1971104_1971635_+	Eae protein	Q5G8U6	Enterobacteria_phage	1.1e-53	61.2
SQH40170.1\|1971631_1971889_+	phage protein	T1S9K2	Salmonella_phage	3.0e-36	87.1
SQH40171.1\|1971885_1972122_+	Uncharacterised protein	NA	NA	NA	NA
SQH40172.1\|1972118_1973192_+	Eaa protein	H6WRY2	Salmonella_phage	3.7e-35	80.2
SQH40173.1\|1973188_1973422_+	Eaa protein	A0A220NQT9	Salmonella_phage	1.4e-11	83.7
SQH40174.1\|1973443_1973554_+	Uncharacterised protein	NA	NA	NA	NA
SQH40175.1\|1973926_1974586_+	acetyltransferase	A0A0M3LPL3	Mannheimia_phage	3.1e-08	50.9
SQH40176.1\|1974586_1974757_+	Uncharacterised protein	Q5G8V2	Enterobacteria_phage	6.7e-16	89.1
SQH40177.1\|1974895_1975525_+	Uncharacterised protein	NA	NA	NA	NA
SQH40178.1\|1975693_1975858_+	Uncharacterised protein	NA	NA	NA	NA
SQH40179.1\|1975970_1976261_+	Protein of uncharacterised function (DUF968)	I6XGC2	Burkholderia_virus	2.2e-22	55.4
SQH40180.1\|1976260_1976620_+	Holliday junction resolvase	K7P6W0	Enterobacteria_phage	2.8e-35	58.9
SQH40181.1\|1976616_1977219_+	bacteriophage protein	H9C175	Pectobacterium_phage	7.3e-73	63.1
SQH40182.1\|1977274_1977793_-	Uncharacterised protein	NA	NA	NA	NA
SQH40183.1\|1978225_1978807_+	antirepressor	A0A2D1GLJ3	Escherichia_phage	2.2e-26	50.0
SQH40184.1\|1978835_1979555_-	Uncharacterised protein	S5W9D9	Leptospira_phage	5.6e-19	29.8
SQH40185.1\|1979661_1980507_-	CRISPR-associated protein Cas1	NA	NA	NA	NA
SQH40186.1\|1980752_1980944_-	Uncharacterised protein	NA	NA	NA	NA
SQH40187.1\|1981076_1981748_-	Uncharacterised protein	NA	NA	NA	NA
SQH40188.1\|1981740_1982130_-	Uncharacterised protein	NA	NA	NA	NA
SQH40189.1\|1982169_1982628_-	Streptococcus thermophilus bacteriophage Gp111 protein	NA	NA	NA	NA
SQH40190.1\|1983088_1983679_+	antitermination protein	A0A0M4RTW7	Salmonella_phage	4.4e-22	44.1
SQH40191.1\|1983877_1984075_-	Uncharacterised protein	NA	NA	NA	NA
SQH40192.1\|1984193_1984535_+	Uncharacterised protein	NA	NA	NA	NA
SQH40193.1\|1984574_1985057_+	Uncharacterised protein	A0A222YWL8	Escherichia_phage	2.8e-59	68.4
SQH40194.1\|1985131_1985383_+	Uncharacterised protein	NA	NA	NA	NA
SQH40195.1\|1985470_1986172_+	Putative methyl transferase	A0A097EWK8	Mycobacterium_phage	1.0e-25	32.9
SQH40196.1\|1986397_1986952_+\|terminase	terminase	E4WL18	Enterobacteria_phage	1.2e-58	64.4
SQH40197.1\|1986926_1988855_+\|terminase	terminase	K7PGW7	Enterobacteria_phage	5.5e-263	67.8
SQH40198.1\|1988847_1989084_+\|head,tail	head-tail joining protein	NA	NA	NA	NA
SQH40199.1\|1989080_1990637_+\|head,tail	Gifsy-1 prophage head-tail preconnector gp4	E4WL21	Enterobacteria_phage	7.2e-189	64.2
SQH40200.1\|1990636_1991980_+	scaffold protein	A0A2I6TC87	Escherichia_phage	1.6e-107	52.9
SQH40201.1\|1991982_1992312_+	Head decoration protein	NA	NA	NA	NA
SQH40202.1\|1992370_1993405_+\|capsid	phage major capsid protein E	C6ZCY2	Enterobacteria_phage	3.2e-108	58.5
SQH40203.1\|1993450_1993825_+	Uncharacterised protein	NA	NA	NA	NA
SQH40204.1\|1993821_1994205_+	Uncharacterised protein	NA	NA	NA	NA
SQH40205.1\|1994236_1994911_+	Uncharacterised protein	NA	NA	NA	NA
SQH40206.1\|1994907_1995468_+	Uncharacterised protein	NA	NA	NA	NA
SQH40207.1\|1995439_1996351_+\|plate	baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	8.9e-14	34.2
SQH40208.1\|1996356_1996698_+\|plate	baseplate assembly protein	Q75QM0	Wolbachia_phage	1.1e-20	49.0
SQH40209.1\|1996697_1997618_+\|plate	phage baseplate assembly protein J	D5LGZ3	Escherichia_phage	6.4e-68	47.8
SQH40210.1\|1997620_1998235_+\|tail	putative phage tail protein	A0A088FVH1	Escherichia_phage	2.8e-27	41.5
SQH40211.1\|1998238_1999417_+\|tail	phage tail fiber protein	A0A193GYM0	Enterobacter_phage	5.5e-16	37.9
SQH40212.1\|1999419_1999803_+\|tail	Caudovirales tail fibre assembly protein	NA	NA	NA	NA
SQH40213.1\|1999799_2001299_+\|tail	major tail sheath protein FI	D4HTW1	Vibrio_phage	1.4e-64	41.0
SQH40214.1\|2001317_2001830_+\|tail	phage major tail tube protein	NA	NA	NA	NA
SQH40215.1\|2001846_2002134_+	Uncharacterised protein	NA	NA	NA	NA
SQH40216.1\|2002236_2003808_+	Uncharacterised protein	R9TRP8	Vibrio_phage	4.2e-43	32.8
SQH40217.1\|2003847_2004237_+	gpU phage protein	A0A2H4J875	uncultured_Caudovirales_phage	1.1e-18	39.3
SQH40218.1\|2004225_2004801_-	Uncharacterised protein	NA	NA	NA	NA
SQH40219.1\|2005032_2006079_+	late control protein D	R9TNM7	Vibrio_phage	6.6e-37	31.4
SQH40220.1\|2006597_2007464_-	phage antirepressor protein	Q0H8C7	Salmonella_phage	6.8e-80	70.5
SQH40221.1\|2008141_2009035_+\|tail	Phage tail fiber protein	A0A1L5C071	Aquamicrobium_phage	3.8e-09	55.2
SQH40222.1\|2009652_2009937_+	putative inner membrane protein	NA	NA	NA	NA
SQH40223.1\|2010157_2011591_+	NLP/P60 domain-containing protein	NA	NA	NA	NA
SQH40224.1\|2011802_2012129_+	glucose-6-phosphate dehydrogenase	NA	NA	NA	NA
SQH40225.1\|2012533_2013199_+	putative metal-binding protein related to the C-terminal domain of SecA	H9NBT7	Sphingomonas_phage	5.5e-05	65.5
SQH40226.1\|2013271_2014414_-	Tyrosine-specific transport protein	NA	NA	NA	NA
SQH40227.1\|2014708_2014948_+	putative metal-binding protein	NA	NA	NA	NA
SQH40228.1\|2014993_2015491_-	ferritin	NA	NA	NA	NA
SQH40229.1\|2015589_2015685_-	Uncharacterised protein	NA	NA	NA	NA
SQH40230.1\|2015730_2016066_-	outer membrane lipoprotein	NA	NA	NA	NA
SQH40231.1\|2016321_2016960_+	Putative sugar phosphate isomerase	NA	NA	NA	NA
SQH40232.1\|2017128_2017380_+	Protein of uncharacterised function (DUF2766)	NA	NA	NA	NA
SQH40233.1\|2017466_2017970_-	ferritin-like protein	NA	NA	NA	NA
SQH40234.1\|2018522_2019080_+	thiamine biogenesis protein ThiJ	NA	NA	NA	NA
SQH40235.1\|2019698_2020601_+	trehalose phosphatase	NA	NA	NA	NA
SQH40236.1\|2020575_2021997_+	trehalose-6-phosphate synthase	NA	NA	NA	NA
SQH40237.1\|2022014_2022443_-	Universal stress protein C	NA	NA	NA	NA
SQH40238.1\|2023229_2023571_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
SQH40239.1\|2023573_2024152_+	flagellar transcriptional activator	NA	NA	NA	NA
SQH40240.1\|2024275_2025163_+	motility protein A	NA	NA	NA	NA
SQH40241.1\|2025159_2026089_+	motility protein B	NA	NA	NA	NA
SQH40242.1\|2026093_2028100_+	chemotaxis protein CheA	NA	NA	NA	NA
SQH40243.1\|2028120_2028624_+	purine binding chemotaxis protein	NA	NA	NA	NA
SQH40244.1\|2028861_2030523_+	methyl accepting chemotaxis protein II, aspartate sensor-receptor	A0A2H4J162	uncultured_Caudovirales_phage	2.6e-11	25.4
SQH40245.1\|2030683_2031550_+	chemotaxis protein methyltransferase	NA	NA	NA	NA
SQH40246.1\|2031546_2032596_+	protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
SQH40247.1\|2032613_2033003_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	2.2e-06	30.4
SQH40248.1\|2033010_2033658_+	chemotaxis regulator CheZ	NA	NA	NA	NA
SQH40249.1\|2033851_2035003_+	flagellar biosynthetic protein FlhB	NA	NA	NA	NA
2033792:2033807	attR	NA	NA	NA	NA
SQH40250.1\|2034995_2037074_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
SQH40251.1\|2037073_2037466_+	flagellar protein FlhE	NA	NA	NA	NA
SQH40252.1\|2037702_2038842_+	Rhamnogalacturonides degradation protein RhiN	NA	NA	NA	NA
SQH40253.1\|2038896_2040768_-	penicillin-binding protein	NA	NA	NA	NA
SQH40254.1\|2040956_2042690_-\|tRNA	arginyl-tRNA synthetase	A0A2K9L6Z2	Tupanvirus	3.1e-84	33.4
SQH40255.1\|2042926_2043496_+	Protein yecM	NA	NA	NA	NA
SQH40256.1\|2043515_2044262_+	copper homeostasis protein CutC	NA	NA	NA	NA
SQH40257.1\|2044497_2045469_-\|tRNA	tRNA (5-methoxyuridine) 34 synthase	NA	NA	NA	NA
SQH40258.1\|2045465_2046209_-\|tRNA	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	F5B419	Synechococcus_phage	1.6e-24	30.4
SQH40259.1\|2046249_2046645_-	membrane protein	NA	NA	NA	NA
SQH40260.1\|2046897_2047716_-	Protein of uncharacterised function DUF72	Q859D1	Escherichia_coli_phage	2.0e-57	80.3
SQH40261.1\|2047712_2048279_-	putative isochorismatase hydrolase	NA	NA	NA	NA
SQH40262.1\|2048603_2050376_+\|tRNA	aspartyl-tRNA synthetase	NA	NA	NA	NA

DBSCAN-SWA_8

2843888 : 2907849

Shigella_phage(20.0%)

tRNA,holin,protease,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH41027.1\|2843888_2845082_+\|transposase	transposase IS4 family protein	S5FM71	Shigella_phage	9.5e-149	65.2
SQH41028.1\|2844954_2845491_-	Uncharacterised protein	NA	NA	NA	NA
SQH41029.1\|2845527_2846316_-	phosphate starvation-inducible protein PsiH	R4II13	Cronobacter_phage	7.8e-91	76.7
SQH41030.1\|2846294_2846591_-	protein phoH	NA	NA	NA	NA
SQH41031.1\|2846995_2849278_+	leucine rich repeat virulence protein	NA	NA	NA	NA
SQH41032.1\|2849407_2851168_+	virulence protein	NA	NA	NA	NA
SQH41033.1\|2851219_2852728_-	sodium/proline symporter	NA	NA	NA	NA
SQH41034.1\|2853149_2857112_+	trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA
SQH41035.1\|2857170_2857566_+	putative secreted protein	NA	NA	NA	NA
SQH41036.1\|2857562_2858201_-	transcriptional regulator	NA	NA	NA	NA
SQH41037.1\|2858337_2858505_-	Stress-induced bacterial acidophilic repeat motif	Q9KX95	Enterobacteria_phage	1.4e-05	92.6
SQH41038.1\|2858889_2859486_+	trp repressor binding protein	NA	NA	NA	NA
SQH41039.1\|2859506_2859734_+	putative cytoplasmic protein	NA	NA	NA	NA
SQH41040.1\|2859767_2861009_-	glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA
SQH41041.1\|2861141_2861648_-	alkyl hydroperoxide reductase	NA	NA	NA	NA
SQH41042.1\|2861637_2862261_-	secreted protein, suppressor for copper-sensitivity C precursor	NA	NA	NA	NA
SQH41043.1\|2862257_2864144_-	copper-sensitivity suppressor membrane protein B	NA	NA	NA	NA
SQH41044.1\|2864192_2864555_-	copper-sensitivity suppressor membrane protein A	NA	NA	NA	NA
SQH41045.1\|2864790_2865711_+	curved DNA-binding protein	A0A1V0SIM1	Klosneuvirus	7.2e-11	45.3
SQH41046.1\|2865710_2866016_+	chaperone-modulator protein CbpM	NA	NA	NA	NA
SQH41047.1\|2866783_2867032_+	anti-adapter protein IraM	NA	NA	NA	NA
SQH41048.1\|2867440_2868130_-	3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA	NA	NA	NA
SQH41049.1\|2868131_2869400_-	5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase	NA	NA	NA	NA
SQH41050.1\|2869463_2870696_+	4-hydroxyphenylacetate 3-monooxygenase	NA	NA	NA	NA
SQH41051.1\|2870713_2871226_+	4-hydroxyphenylacetate 3-monooxygenase coupling protein	NA	NA	NA	NA
SQH41052.1\|2871349_2871760_-	hydroxyisourate hydrolase	NA	NA	NA	NA
SQH41053.1\|2871895_2872576_+	transcriptional regulatory protein YedW	W8CYM9	Bacillus_phage	9.9e-34	36.1
SQH41054.1\|2872568_2873933_+	sensor histidine kinase	NA	NA	NA	NA
SQH41055.1\|2874012_2875575_+	peptidase family C69	NA	NA	NA	NA
SQH41056.1\|2876297_2877977_+	secreted effector protein	NA	NA	NA	NA
SQH41057.1\|2877992_2878334_+	type III secretion chaperone protein SigE	NA	NA	NA	NA
SQH41058.1\|2878587_2878995_-	phage-related lipoprotein	NA	NA	NA	NA
SQH41059.1\|2879846_2882471_+	phage-like protein	NA	NA	NA	NA
SQH41060.1\|2882526_2883003_-\|tail	side tail fiber protein	M1TAS6	Escherichia_phage	7.9e-22	57.5
SQH41061.1\|2882999_2883230_-	Phage endolysin R	K7PLY1	Enterobacteria_phage	2.9e-14	66.1
SQH41062.1\|2883300_2883516_-\|holin	phage-holin analog protein	NA	NA	NA	NA
SQH41063.1\|2883675_2883987_-\|transposase	transposase for IS200	NA	NA	NA	NA
SQH41064.1\|2884163_2885357_-\|transposase	transposase IS4 family protein	S5FM71	Shigella_phage	4.7e-148	65.0
SQH41065.1\|2885964_2887833_-	putative periplasmic protein	NA	NA	NA	NA
SQH41066.1\|2887854_2888400_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
SQH41067.1\|2888456_2889098_-	Nicotinamidase family protein YcaC	NA	NA	NA	NA
SQH41068.1\|2889695_2890598_+	transcriptional regulator	NA	NA	NA	NA
SQH41069.1\|2891414_2892074_+	Putative TEGT family carrier/transport protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.6e-44	52.4
SQH41070.1\|2892161_2892491_+\|tRNA	tRNA 2-thiouridine synthesizing protein E	NA	NA	NA	NA
SQH41071.1\|2892487_2892769_-	acylphosphatase	NA	NA	NA	NA
SQH41072.1\|2892817_2893606_-	transcriptional regulator	NA	NA	NA	NA
SQH41073.1\|2893622_2894171_-	kinase inhibitor	NA	NA	NA	NA
SQH41074.1\|2894385_2895597_+	LSU m5C1962 methyl transferase RlmI	NA	NA	NA	NA
SQH41075.1\|2895654_2895972_+	hemimethylated DNA binding protein YccV	NA	NA	NA	NA
SQH41076.1\|2896026_2896440_-	Succinyl-CoA synthetase alpha subunit-related enzyme	NA	NA	NA	NA
SQH41077.1\|2896613_2897276_+	UPF0319 protein YccT precursor	NA	NA	NA	NA
SQH41078.1\|2897370_2897829_+	methylglyoxal synthase	NA	NA	NA	NA
SQH41079.1\|2897864_2899919_-	helicase IV	A7KV33	Bacillus_phage	5.0e-20	27.3
SQH41080.1\|2900042_2900489_+	Inner membrane protein YccF	NA	NA	NA	NA
SQH41081.1\|2900507_2902661_+	Putative efflux (PET) family inner membrane protein YccS	NA	NA	NA	NA
SQH41082.1\|2902647_2903253_-	DNA transformation protein TfoX	NA	NA	NA	NA
SQH41083.1\|2903469_2903979_+	cell division inhibitor	NA	NA	NA	NA
SQH41084.1\|2904335_2905388_+	outer membrane protein A	NA	NA	NA	NA
SQH41085.1\|2905457_2906021_-	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA
SQH41086.1\|2906088_2907849_+\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_9

3384517 : 3395385

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH41499.1\|3384517_3385201_+	transcriptional regulator	W8CYM9	Bacillus_phage	5.5e-32	36.5
SQH41500.1\|3385190_3386642_+	sensor kinase CusS	A0A1V0SGX0	Hokovirus	4.6e-12	27.6
SQH41501.1\|3386773_3387097_+	copE1	NA	NA	NA	NA
SQH41502.1\|3387213_3387480_-\|transposase	transposase IS66	A0A218MNE7	uncultured_virus	3.5e-19	55.0
SQH41503.1\|3387492_3388764_-\|transposase	transposase IS66	A0A218MNE7	uncultured_virus	7.5e-51	36.4
SQH41504.1\|3388791_3389127_-\|transposase	putative transposase subunit	NA	NA	NA	NA
SQH41505.1\|3389113_3389428_-	Uncharacterised protein	NA	NA	NA	NA
SQH41506.1\|3389707_3390070_+	translocase	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
SQH41507.1\|3390066_3390990_+	bactoprenol glucosyl transferase	A8CG95	Salmonella_phage	3.1e-163	92.5
SQH41508.1\|3390986_3392450_+	GtrC	A8CG94	Salmonella_phage	2.3e-19	22.8
SQH41509.1\|3392705_3393728_+\|transposase	transposase	NA	NA	NA	NA
SQH41510.1\|3394360_3394855_+\|transposase	transposase IS1113	F6MIM4	Haemophilus_phage	1.4e-05	56.9
SQH41511.1\|3394809_3395385_+\|transposase	transposase IS1113	A0A218MNI5	uncultured_virus	4.9e-26	36.4

DBSCAN-SWA_10

3427388 : 3485554

Bacillus_phage(25.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH41545.1\|3427388_3428306_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
SQH41546.1\|3428302_3428755_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
SQH41547.1\|3428755_3429172_-	copper efflux regulator	NA	NA	NA	NA
SQH41548.1\|3429281_3431783_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	1.4e-112	37.4
SQH41549.1\|3432917_3433397_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
SQH41550.1\|3433520_3435173_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
SQH41551.1\|3435345_3436566_+	fosmidomycin resistance protein	NA	NA	NA	NA
SQH41552.1\|3436780_3438457_+	transport protein	NA	NA	NA	NA
SQH41553.1\|3438505_3439810_-	inosine/guanosine kinase	NA	NA	NA	NA
SQH41554.1\|3439962_3440934_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	2.5e-14	27.4
SQH41555.1\|3440930_3441893_-	ferrochelatase	NA	NA	NA	NA
SQH41556.1\|3442094_3442739_-	adenylate kinase	NA	NA	NA	NA
SQH41557.1\|3442970_3444845_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.5e-116	37.1
SQH41558.1\|3444955_3445561_-	recombination protein RecR	NA	NA	NA	NA
SQH41559.1\|3445560_3445890_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
SQH41560.1\|3447977_3448529_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	7.8e-29	45.2
SQH41561.1\|3448681_3449059_-	Inner membrane protein YbaN	NA	NA	NA	NA
SQH41562.1\|3449139_3449655_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
SQH41563.1\|3449668_3449836_+	Putative inner membrane protein	NA	NA	NA	NA
SQH41564.1\|3449905_3450829_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	9.5e-64	52.1
SQH41565.1\|3450870_3454230_-	integral membrane protein AefA	NA	NA	NA	NA
SQH41566.1\|3454348_3455002_-	potential acrAB operon repressor	NA	NA	NA	NA
SQH41567.1\|3455143_3456337_+	acriflavin resistance protein A	NA	NA	NA	NA
SQH41568.1\|3456359_3459509_+	acriflavin resistance protein B	NA	NA	NA	NA
SQH41569.1\|3460005_3460380_+	Hha toxicity attenuator	NA	NA	NA	NA
SQH41570.1\|3460407_3460626_+	hemolysin expression modulating protein	NA	NA	NA	NA
SQH41571.1\|3460804_3461356_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQH41572.1\|3461472_3461943_+	Putative inner membrane protein	NA	NA	NA	NA
SQH41573.1\|3462141_3462402_-	50S ribosomal protein L31	NA	NA	NA	NA
SQH41574.1\|3462626_3464177_+	Uncharacterized protein ylaB	NA	NA	NA	NA
SQH41575.1\|3464485_3464797_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
SQH41576.1\|3464829_3465399_-	lipoprotein	NA	NA	NA	NA
SQH41577.1\|3465613_3466474_+	acyl-CoA thioesterase II	NA	NA	NA	NA
SQH41578.1\|3466580_3467867_-	ammonium transporter	NA	NA	NA	NA
SQH41579.1\|3467898_3468237_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
SQH41580.1\|3468450_3470232_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	2.1e-38	26.5
SQH41581.1\|3470224_3471997_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	1.4e-50	29.6
SQH41582.1\|3472037_3472496_-	transcriptional regulator	NA	NA	NA	NA
SQH41583.1\|3472608_3473664_+	lyase	NA	NA	NA	NA
SQH41584.1\|3473713_3474532_-	HMP-PP phosphatase	NA	NA	NA	NA
SQH41585.1\|3474632_3476333_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQH41586.1\|3476397_3477093_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	6.0e-87	67.6
SQH41587.1\|3477198_3477597_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
SQH41588.1\|3477700_3478075_-	competence protein ComEA	NA	NA	NA	NA
SQH41589.1\|3478224_3480096_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
SQH41590.1\|3480386_3480659_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.9e-20	58.4
SQH41591.1\|3480867_3483222_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	7.2e-225	52.5
SQH41592.1\|3483407_3484679_-\|protease	ATP-dependent clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.5e-131	56.5
SQH41593.1\|3484930_3485554_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9

DBSCAN-SWA_11

3745540 : 3812646

uncultured_Mediterranean_phage(10.0%)

bacteriocin,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH41828.1\|3745540_3746968_-\|protease	serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	4.2e-26	29.2
SQH41829.1\|3747097_3748615_-	Deoxyguanosinetriphosphate triphospho hydrolase subgroup 1	NA	NA	NA	NA
SQH41830.1\|3748699_3749398_+	MTA/SAH nucleosidase	NA	NA	NA	NA
SQH41831.1\|3749390_3750191_+	cobalamin periplasmic binding protein	NA	NA	NA	NA
SQH41832.1\|3750227_3750851_+	inner membrane protein YadS	NA	NA	NA	NA
SQH41833.1\|3750951_3751296_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	2.2e-26	49.5
SQH41834.1\|3751377_3752799_-	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA
SQH41835.1\|3752968_3754249_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
SQH41836.1\|3754306_3756289_-	iron-hydroxamate transporter permease subunit	NA	NA	NA	NA
SQH41837.1\|3756285_3757176_-	ferrichrome-binding periplasmic protein	NA	NA	NA	NA
SQH41838.1\|3757175_3757973_-	ferrichrome transport ATP-binding protein FhuC	A0A2H4PQG7	Staphylococcus_phage	5.2e-10	23.5
SQH41839.1\|3758021_3760271_-	ferrichrome-iron receptor	NA	NA	NA	NA
SQH41840.1\|3760563_3763083_-	penicillin-binding protein 1b	NA	NA	NA	NA
SQH41841.1\|3763222_3765697_-	ATP-dependent helicase HrpB	A0A2H4UU36	Bodo_saltans_virus	7.3e-34	28.1
SQH41842.1\|3765724_3766255_+	2'-5' RNA ligase	NA	NA	NA	NA
SQH41843.1\|3766271_3766976_+	Sugar fermentation stimulation protein	NA	NA	NA	NA
SQH41844.1\|3767152_3767608_+	dnaK suppressor protein	NA	NA	NA	NA
SQH41845.1\|3767631_3768573_+\|tRNA	glutamyl-Q tRNA(Asp) synthetase	NA	NA	NA	NA
SQH41846.1\|3768714_3770133_+	poly(A) polymerase	G3MAR3	Bacillus_virus	2.4e-26	35.9
SQH41847.1\|3770129_3770609_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase	NA	NA	NA	NA
SQH41848.1\|3770731_3771523_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
SQH41849.1\|3771643_3772492_+	pantoate:beta-alanine ligase	NA	NA	NA	NA
SQH41850.1\|3772582_3772984_-	membrane protein	NA	NA	NA	NA
SQH41851.1\|3773256_3773637_+	aspartate 1-decarboxylase	NA	NA	NA	NA
SQH41852.1\|3774079_3774664_+	fimbrial protein StkA	NA	NA	NA	NA
SQH41853.1\|3774729_3775449_+	fimbrial assembly chaperone protein StcB	NA	NA	NA	NA
SQH41854.1\|3775490_3778097_+	fimbrial outer membrane usher protein	NA	NA	NA	NA
SQH41855.1\|3778122_3778698_+	fimbrial protein	NA	NA	NA	NA
SQH41856.1\|3778713_3779277_+	fimbrial protein	NA	NA	NA	NA
SQH41857.1\|3779298_3779904_+	fimbrial protein	NA	NA	NA	NA
SQH41858.1\|3779926_3781024_+	fimbrial protein	NA	NA	NA	NA
SQH41859.1\|3781025_3782255_-	polysaccharide deacetylase domain protein	NA	NA	NA	NA
SQH41860.1\|3782316_3782757_-	PTS system IIA component	NA	NA	NA	NA
SQH41861.1\|3782861_3783632_-	ABC transporter	NA	NA	NA	NA
SQH41862.1\|3783628_3784555_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-21	32.7
SQH41863.1\|3784663_3785326_+	carbonic anhydrase	NA	NA	NA	NA
SQH41864.1\|3785383_3785980_-	Hypoxanthine-guanine phosphoribosyl transferase	A0A218MMB5	uncultured_virus	6.7e-18	33.1
SQH41865.1\|3786125_3788516_+	glucose dehydrogenase	NA	NA	NA	NA
SQH41866.1\|3788593_3790204_-	Blue copper oxidase CueO	A0A0C6DWA2	Mamastrovirus	1.7e-20	59.8
SQH41867.1\|3790366_3790753_+	lipoprotein, PulS/OutS family	NA	NA	NA	NA
SQH41868.1\|3790859_3791720_+	spermidine synthase	NA	NA	NA	NA
SQH41869.1\|3791740_3792535_+	S-adenosylmethionine decarboxylase proenzyme	NA	NA	NA	NA
SQH41870.1\|3792564_3793332_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	2.8e-29	35.7
SQH41871.1\|3793341_3794325_-	4-hydroxythreonine-4-phosphate dehydrogenase	NA	NA	NA	NA
SQH41872.1\|3794314_3795586_-	membrane protein	NA	NA	NA	NA
SQH41873.1\|3795582_3796536_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA
SQH41874.1\|3796770_3797133_-	protein YacL	NA	NA	NA	NA
SQH41875.1\|3797320_3799918_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
SQH41876.1\|3800309_3801908_+	membrane protein	NA	NA	NA	NA
SQH41877.1\|3801920_3802712_+	probable secreted protein	NA	NA	NA	NA
SQH41878.1\|3802736_3803021_-	putative secreted protein	NA	NA	NA	NA
SQH41879.1\|3803340_3804765_-	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.7e-41	26.9
SQH41880.1\|3804966_3806856_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
SQH41881.1\|3806870_3809534_-	pyruvate dehydrogenase E1 component	NA	NA	NA	NA
SQH41882.1\|3809693_3810458_-	pyruvate dehydrogenase complex repressor	NA	NA	NA	NA
SQH41883.1\|3810909_3811200_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQH41884.1\|3811269_3811560_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQH41885.1\|3811629_3811920_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQH41886.1\|3811989_3812280_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQH41887.1\|3812349_3812646_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_12

4079498 : 4086046

Enterobacteria_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH42121.1\|4079498_4079945_-\|transposase	transposase InsF for insertion sequence IS3A/B/C/D/E/fA	Q716C2	Shigella_phage	1.8e-31	48.1
SQH42122.1\|4080758_4081214_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	7.0e-44	60.3
SQH42123.1\|4081428_4081992_-	type II restriction endonuclease PvuII	A0A1B0UXL9	Roseobacter_phage	2.7e-29	41.6
SQH42124.1\|4082280_4083276_+	DNA methyltransferase	S0A236	Cellulophaga_phage	1.3e-18	24.6
SQH42125.1\|4083316_4083904_-	Integrase	B7SYF8	Stenotrophomonas_phage	8.8e-31	45.2
SQH42126.1\|4083903_4084521_-	Integrase	Q7M297	Enterobacteria_phage	1.3e-24	34.9
SQH42127.1\|4085026_4086046_+	zinc-type alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	1.3e-42	30.3

DBSCAN-SWA_13

4197626 : 4248757

Vibrio_phage(16.67%)

protease,tRNA,transposase,integrase

attL 4244989:4245004|attR 4258242:4258257

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH42240.1\|4197626_4198358_-\|tRNA	putative tRNA/rRNA methyltransferase	NA	NA	NA	NA
SQH42241.1\|4198421_4200866_-	ribonuclease R (RNase R)	Q0GXV6	Lactococcus_phage	1.3e-67	32.8
SQH42242.1\|4200903_4201329_-	transcriptional regulator	NA	NA	NA	NA
SQH42243.1\|4201548_4202847_-	adenylosuccinate synthetase	W5S5V7	Pithovirus	4.2e-65	35.2
SQH42244.1\|4202949_4203147_-	membrane protein	NA	NA	NA	NA
SQH42245.1\|4203225_4204230_-\|protease	FtsH protease regulator HflC	NA	NA	NA	NA
SQH42246.1\|4204232_4205492_-\|protease	protease	A0A1L2CVV0	Pectobacterium_phage	8.0e-05	25.0
SQH42247.1\|4205707_4206988_-\|protease	GTP-binding subunit of protease	NA	NA	NA	NA
SQH42248.1\|4207059_4207368_-	host factor-I protein(HF-I)	NA	NA	NA	NA
SQH42249.1\|4207450_4208356_-\|tRNA	tRNA delta-2-isopentenylpyrophosphate (IPP) transferase	NA	NA	NA	NA
SQH42250.1\|4208393_4210250_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	1.2e-60	42.1
SQH42251.1\|4210259_4211579_-	N-acetylmuramoyl-l-alanine amidase II	A0A067ZJB6	Vibrio_phage	1.4e-15	29.2
SQH42252.1\|4211595_4212057_-	ATPase YjeE predicted to have essential rolein cell wall biosynthesis	NA	NA	NA	NA
SQH42253.1\|4212028_4213573_-	carbohydrate kinase	NA	NA	NA	NA
SQH42254.1\|4213574_4214714_+	Fe-S protein	NA	NA	NA	NA
SQH42255.1\|4215797_4216538_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
SQH42256.1\|4216599_4217145_-	Oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	1.7e-28	40.4
SQH42257.1\|4217251_4218304_+	ribosome-associated GTPase	NA	NA	NA	NA
SQH42258.1\|4218395_4219364_+	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA
SQH42259.1\|4219382_4222709_+	Potassium efflux system KefA protein	NA	NA	NA	NA
SQH42260.1\|4222770_4224273_-	amino acid permease	NA	NA	NA	NA
SQH42261.1\|4224497_4225475_-\|tRNA	lysyl-tRNA synthetase	A0A2K9KZX5	Tupanvirus	1.3e-26	29.1
SQH42262.1\|4225797_4227588_+	fumarate reductase flavoprotein subunit	NA	NA	NA	NA
SQH42263.1\|4227580_4228315_+	fumarate reductase, iron-sulfur protein	NA	NA	NA	NA
SQH42264.1\|4228325_4228721_+	fumarate reductase complex subunit C; membrane anchor polypeptide	NA	NA	NA	NA
SQH42265.1\|4228731_4229091_+	fumarate reductase complex subunit D; membrane anchor polypeptide	NA	NA	NA	NA
SQH42266.1\|4229202_4229736_+	lipoprotein	A0A1W6JNX6	Morganella_phage	1.0e-46	54.1
SQH42267.1\|4229752_4230070_-	SugE protein	NA	NA	NA	NA
SQH42268.1\|4230328_4230916_+	LuxR family transcriptional regulator	NA	NA	NA	NA
SQH42269.1\|4230946_4231093_-	entericidin B membrane lipoprotein	NA	NA	NA	NA
SQH42270.1\|4231200_4231365_-	entericidin A	NA	NA	NA	NA
SQH42271.1\|4231395_4231962_-	Elongation factor P EF-P	NA	NA	NA	NA
SQH42272.1\|4232002_4233031_+	Lysyl-lysine 23-aminomutase	NA	NA	NA	NA
SQH42273.1\|4233313_4234171_+	inner membrane protein	NA	NA	NA	NA
SQH42274.1\|4234218_4234572_-	membrane protein	NA	NA	NA	NA
SQH42275.1\|4234703_4234793_-	Uncharacterised protein	NA	NA	NA	NA
SQH42276.1\|4234824_4236471_-	GroEL protein	A0A2I7SAK5	Vibrio_phage	2.4e-190	69.1
SQH42277.1\|4236514_4236808_-	GroES protein	K4F9I2	Cronobacter_phage	1.2e-12	43.3
SQH42278.1\|4237083_4238325_+	transporter	NA	NA	NA	NA
SQH42279.1\|4238383_4238899_-	FxsA protein	NA	NA	NA	NA
SQH42280.1\|4239200_4240637_+	aspartate ammonia-lyase	NA	NA	NA	NA
SQH42281.1\|4240751_4242053_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
SQH42282.1\|4242173_4242521_+	Divalent cation tolerance protein	NA	NA	NA	NA
SQH42283.1\|4242496_4244200_+	thiol:disulfide interchange protein DsbD	NA	NA	NA	NA
SQH42284.1\|4244236_4244812_+	transcriptional regulator	NA	NA	NA	NA
4244989:4245004	attL	NA	NA	NA	NA
SQH42285.1\|4245163_4246423_+\|integrase	bacteriophage integrase	B7SYF8	Stenotrophomonas_phage	1.2e-77	41.7
SQH42286.1\|4246821_4247136_+	Uncharacterised protein	NA	NA	NA	NA
SQH42287.1\|4247122_4247458_+\|transposase	putative transposase subunit	NA	NA	NA	NA
SQH42288.1\|4247485_4248757_+\|transposase	transposase IS66	A0A218MNE7	uncultured_virus	7.5e-51	36.4
4258242:4258257	attR	NA	NA	NA	NA

DBSCAN-SWA_14

4399443 : 4445223

Burkholderia_phage(38.1%)

tail,plate,tRNA,integrase

attL 4397327:4397344|attR 4452910:4452927

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4397327:4397344	attL	NA	NA	NA	NA
SQH42398.1\|4399443_4400481_-\|tRNA	tRNA dihydrouridine synthase A	NA	NA	NA	NA
SQH42399.1\|4400566_4400707_+\|integrase	integrase	NA	NA	NA	NA
SQH42400.1\|4400684_4400990_+	Uncharacterised protein	NA	NA	NA	NA
SQH42401.1\|4400864_4401935_-	zinc-dependent alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.1e-15	25.7
SQH42402.1\|4402390_4403521_-	conjugative transfer protein	NA	NA	NA	NA
SQH42403.1\|4403767_4404283_+	zinc uptake regulation protein	NA	NA	NA	NA
SQH42404.1\|4404381_4404594_-	stress-response protein	NA	NA	NA	NA
SQH42405.1\|4404612_4404741_-	putative cytoplasmic protein	NA	NA	NA	NA
SQH42406.1\|4404722_4406048_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA
SQH42407.1\|4406222_4406831_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
SQH42408.1\|4406939_4407308_-	diacylglycerol kinase	NA	NA	NA	NA
SQH42409.1\|4407478_4409899_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQH42410.1\|4410009_4410882_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
SQH42411.1\|4410895_4411393_-	chorismate lyase	NA	NA	NA	NA
SQH42412.1\|4411573_4412491_-	maltose operon periplasmic protein	NA	NA	NA	NA
SQH42413.1\|4412654_4414013_-	maltoporin	NA	NA	NA	NA
SQH42414.1\|4414100_4415210_-	maltose/maltodextrin transport ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
SQH42415.1\|4415571_4416762_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
SQH42416.1\|4416893_4418438_+	maltose transport inner membrane protein	NA	NA	NA	NA
SQH42417.1\|4418452_4419343_+	maltose transport inner membrane protein	NA	NA	NA	NA
SQH42418.1\|4419686_4421162_+	D-xylose transporter XylE	NA	NA	NA	NA
SQH42419.1\|4421207_4421618_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
SQH42420.1\|4421759_4423856_-	lipoprotein	NA	NA	NA	NA
SQH42421.1\|4423855_4424593_-	putative lipoprotein	NA	NA	NA	NA
SQH42422.1\|4424589_4425228_-	outer membrane lipoprotein	NA	NA	NA	NA
SQH42423.1\|4425291_4425537_-	YjbE secreted protein	NA	NA	NA	NA
SQH42424.1\|4425977_4427627_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA
SQH42425.1\|4428015_4429365_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA
SQH42426.1\|4429499_4429847_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
SQH42427.1\|4430422_4430710_+	membrane protein	Q6QIC8	Burkholderia_phage	1.8e-16	49.1
SQH42428.1\|4430745_4431318_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	8.3e-58	58.3
SQH42429.1\|4431330_4431645_+	membrane protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
SQH42430.1\|4431804_4432260_+	putative cytoplasmic protein	NA	NA	NA	NA
SQH42431.1\|4432256_4432454_+	gp12	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
SQH42432.1\|4432443_4433859_+\|tail	tail protein	A4JWK5	Burkholderia_virus	2.9e-184	69.5
SQH42433.1\|4433858_4434383_+\|tail	tail protein	Q6QIA9	Burkholderia_phage	4.0e-67	69.0
SQH42434.1\|4434434_4434752_+	Uncharacterised protein	NA	NA	NA	NA
SQH42435.1\|4434933_4437219_+\|tail	tail protein	A4JWL0	Burkholderia_virus	4.6e-67	29.2
SQH42436.1\|4437218_4438172_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	7.1e-38	53.1
SQH42437.1\|4438171_4438381_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
SQH42438.1\|4438368_4439409_+	gp21	A4JWL3	Burkholderia_virus	3.9e-74	45.9
SQH42439.1\|4439418_4440141_+\|plate	baseplate protein	A0A067ZIM2	Vibrio_phage	2.3e-12	43.0
SQH42440.1\|4440238_4440598_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.4e-34	64.2
SQH42441.1\|4440588_4441704_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	6.5e-99	51.2
SQH42442.1\|4441696_4442329_+\|tail	tail fiber protein	Q6QI98	Burkholderia_phage	2.1e-22	54.9
SQH42443.1\|4442331_4443477_+\|tail	tail protein	A0A0M3ULH6	Salmonella_phage	3.2e-53	44.4
SQH42444.1\|4443489_4444005_+\|tail	tail assembly chaperone gp38	A0A0U2QV64	Escherichia_phage	4.7e-28	35.6
SQH42445.1\|4444494_4445223_+	cytoplasmic protein	A0A077SLK3	Escherichia_phage	4.3e-35	36.9
4452910:4452927	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: LS483428.1|SQH40186.1|1980752_1980944_-|Uncharacterised-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

LS483428.1|SQH40186.1|1980752_1980944_-|Uncharacterised-protein

1980752_1980944_-

63 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|67	0.6190476190476191	1	1.0

1963734-2050376

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
LS483428_1	Unclear	1.14\|1008425\|32\|LS483428\|CRISPRCasFinder,CRT	1008425-1008456	32	1974872-1974841	0
LS483428_2	Unclear	2.1\|1018237\|32\|LS483428\|PILER-CR,CRISPRCasFinder,CRT	1018237-1018268	32	1987950-1987981	0

1. spacer 1.14|1008425|32|LS483428|CRISPRCasFinder,CRT matches to LS483428 position: 1974872-1974841, mismatch: 0

ccaatgcattatgtaaaatgtatgtttagccc	CRISPR spacer
ccaatgcattatgtaaaatgtatgtttagccc	Protospacer
********************************

2. spacer 2.1|1018237|32|LS483428|PILER-CR,CRISPRCasFinder,CRT matches to LS483428 position: 1987950-1987981, mismatch: 0

gattttttcaagacgaagggcgatcggggcaa	CRISPR spacer
gattttttcaagacgaagggcgatcggggcaa	Protospacer
********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483428

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information