CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483434	Salmonella enterica subsp. enterica serovar Stanley strain NCTC5716 genome assembly, chromosome: 1	2 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	0	18	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483434_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483434_1

970668-972038

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

22 spacers

cas3,cas8e,cse2gr11

The CRISPR arrays of LS483434_1

>merge|LS483434|1|970668-972038|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGTCATGCGGCGCTGCGAGCGTGCGGCCTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCAATACGAGCCGAGTGCGCACGCCCTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGACTGCCGCCGGTGTAGGTGGCGAATGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGAAACGTGGCCCCGCGTGTGTTTTGGTTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAACGGATTCTGGTGGAGTAAATCAAATCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCACGGAATATCTCCATCGGTCGGGTGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTTAATGGCGGGCGAATTGTATTTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATCGGCCTCTGATTTAGACAATTTCAGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCGCGAGGTGATCGAGATGCTTGAGGGTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGTATCTCGAAGAGCGTCAAAAAAGCCGGAATGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCATGAGTGCTACTGCTTTCAACCCGAAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGAGTTCTGGCATGTCAGACTGACGTATCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAACCCTCAAATATGCGTAACGGGAGGCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATTTTTGATCATCTCCTCCAGCCTGCTGAGGTGTTCCCCGCGCTAGCGGGGATAAACCGGATTGTTCAGATTGGGAATTTGACCAACGCCCGTGTTCCCCGCGCTAGCGGGGATAAACCGGTTACTGTATTATCTCTCGCATAGACCCGGCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCCTGAGGAGATATTCACCTTCCTGCATTTCATGTGTTCCCCGCGCTAGCGGGGATAAACCGTCTGGTGGCTGCCTCATATTGTTGCGCATCTAGTGTTCCCCGCGCTAGCGGGGATAAACCGAAAAAAATGCGATCGGTACTCAACCCGGCCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCGGTTTCGGTGGGGGCTGAATCCTGAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCGCCAACGACTGGAATTTTTGCGTGTAGCCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>LS483434|1|1|970668-971977|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTCATGCGGCGCTGCGAGCGTGCGGCCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGACTGCCGCCGGTGTAGGTGGCGAATGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAACGTGGCCCCGCGTGTGTTTTGGTTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACGGATTCTGGTGGAGTAAATCAAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACGGAATATCTCCATCGGTCGGGTGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGGCCTCTGATTTAGACAATTTCAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGCGAGGTGATCGAGATGCTTGAGGGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTATCTCGAAGAGCGTCAAAAAAGCCGGAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCATGAGTGCTACTGCTTTCAACCCGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGAGTTCTGGCATGTCAGACTGACGTATCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACCCTCAAATATGCGTAACGGGAGGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTTTGATCATCTCCTCCAGCCTGCTGAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATTGTTCAGATTGGGAATTTGACCAACGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTTACTGTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCTGAGGAGATATTCACCTTCCTGCATTTCAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCTGGTGGCTGCCTCATATTGTTGCGCATCTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAAAAATGCGATCGGTACTCAACCCGGCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGGTTTCGGTGGGGGCTGAATCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>LS483434|1|1|970668-972038|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTCATGCGGCGCTGCGAGCGTGCGGCCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGACTGCCGCCGGTGTAGGTGGCGAATGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAACGTGGCCCCGCGTGTGTTTTGGTTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACGGATTCTGGTGGAGTAAATCAAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACGGAATATCTCCATCGGTCGGGTGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGGCCTCTGATTTAGACAATTTCAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGCGAGGTGATCGAGATGCTTGAGGGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTATCTCGAAGAGCGTCAAAAAAGCCGGAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCATGAGTGCTACTGCTTTCAACCCGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGAGTTCTGGCATGTCAGACTGACGTATCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACCCTCAAATATGCGTAACGGGAGGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTTTGATCATCTCCTCCAGCCTGCTGAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATTGTTCAGATTGGGAATTTGACCAACGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTTACTGTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCTGAGGAGATATTCACCTTCCTGCATTTCAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCTGGTGGCTGCCTCATATTGTTGCGCATCTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAAAAATGCGATCGGTACTCAACCCGGCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGGTTTCGGTGGGGGCTGAATCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>LS483434|1|1|970668-972038|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTCATGCGGCGCTGCGAGCGTGCGGCCTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGACTGCCGCCGGTGTAGGTGGCGAATGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAACGTGGCCCCGCGTGTGTTTTGGTTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACGGATTCTGGTGGAGTAAATCAAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACGGAATATCTCCATCGGTCGGGTGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGGCCTCTGATTTAGACAATTTCAGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGCGAGGTGATCGAGATGCTTGAGGGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTATCTCGAAGAGCGTCAAAAAAGCCGGAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCATGAGTGCTACTGCTTTCAACCCGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGAGTTCTGGCATGTCAGACTGACGTATCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAACCCTCAAATATGCGTAACGGGAGGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTTTGATCATCTCCTCCAGCCTGCTGAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATTGTTCAGATTGGGAATTTGACCAACGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTTACTGTATTATCTCTCGCATAGACCCGGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCTGAGGAGATATTCACCTTCCTGCATTTCAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCTGGTGGCTGCCTCATATTGTTGCGCATCTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAAAAATGCGATCGGTACTCAACCCGGCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGGTTTCGGTGGGGGCTGAATCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
LS483434.1\|SQH43617.1\|964323_964911_-\|fimbrial-subunit	unknown	unknown	gnl\|CDD\|185169
LS483434.1\|SQH43616.1\|961544_964190_-\|outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
LS483434.1\|SQH43619.1\|966545_968183_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LS483434.1\|SQH43620.1\|968265_969564_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483434.1\|SQH43621.1\|969699_970371_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LS483434.1\|SQH43627.1\|973806_975606_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LS483434.1\|SQH43625.1\|972435_972933_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LS483434.1\|SQH43615.1\|960758_961532_-\|chaperone-protein-PapD	unknown	unknown	gnl\|CDD\|185177
LS483434.1\|SQH43631.1\|979613_982277_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483434.1\|SQH43630.1\|978215_979169_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483434.1\|SQH43633.1\|983844_984393_+\|transposase	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
LS483434.1\|SQH43632.1\|982288_983848_+\|crispr-associated-protein,-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483434.1\|SQH43626.1\|973020_973383_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LS483434.1\|SQH43624.1\|972135_972375_+\|Metallo-beta-lactamase	unknown	unknown	gnl\|CDD\|293799
LS483434.1\|SQH43614.1\|960232_960733_-\|Protein-sfmH-Flags:-Precursor	unknown	unknown	gnl\|CDD\|185178
LS483434.1\|SQH43629.1\|977393_978128_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483434.1\|SQH43613.1\|959747_960233_-\|fimbrial-subunit	unknown	unknown	gnl\|CDD\|185179
LS483434.1\|SQH43618.1\|965517_966318_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LS483434.1\|SQH43628.1\|975605_977318_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LS483434.1\|SQH43612.1\|959214_959706_-\|fimbrial-subunit	unknown	unknown	gnl\|CDD\|185168

Protein	Function_ID	Function_description	E-value
LS483434.1\|SQH43617.1\|964323_964911_-\|fimbrial-subunit	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
LS483434.1\|SQH43616.1\|961544_964190_-\|outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
LS483434.1\|SQH43619.1\|966545_968183_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LS483434.1\|SQH43620.1\|968265_969564_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483434.1\|SQH43621.1\|969699_970371_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	5.23698e-155
LS483434.1\|SQH43627.1\|973806_975606_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LS483434.1\|SQH43625.1\|972435_972933_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.29053e-54
LS483434.1\|SQH43615.1\|960758_961532_-\|chaperone-protein-PapD	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	1.81926e-180
LS483434.1\|SQH43631.1\|979613_982277_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
LS483434.1\|SQH43630.1\|978215_979169_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483434.1\|SQH43633.1\|983844_984393_+\|transposase	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.80691e-33
LS483434.1\|SQH43632.1\|982288_983848_+\|crispr-associated-protein,-Cse1-family	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	4.43834e-173
LS483434.1\|SQH43626.1\|973020_973383_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LS483434.1\|SQH43624.1\|972135_972375_+\|Metallo-beta-lactamase	gnl\|CDD\|293799	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes Methanocaldococcus jannaschii 7,8-dihydropterin-6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate synthase (EC 2.5.1.15), a folate biosynthetic enzyme also known as dihydropteroate synthase and 7,8 dihydropteroate synthase. Thermoanaerobacter tengcongensis Tflp is a ferredoxin-like member. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	8.4385e-34
LS483434.1\|SQH43614.1\|960232_960733_-\|Protein-sfmH-Flags:-Precursor	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.02751e-105
LS483434.1\|SQH43629.1\|977393_978128_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.14735e-139
LS483434.1\|SQH43613.1\|959747_960233_-\|fimbrial-subunit	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.92081e-101
LS483434.1\|SQH43618.1\|965517_966318_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
LS483434.1\|SQH43628.1\|975605_977318_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483434.1\|SQH43612.1\|959214_959706_-\|fimbrial-subunit	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	6.98965e-109

>LS483434.1|SQH43621.1|969699_970371_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLYSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483434.1|SQH43620.1|968265_969564_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LS483434.1|SQH43619.1|966545_968183_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>LS483434.1|SQH43618.1|965517_966318_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LS483434.1|SQH43617.1|964323_964911_-|fimbrial-subunit
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>LS483434.1|SQH43616.1|961544_964190_-|outer-membrane-usher-protein
MLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWIMHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>LS483434.1|SQH43615.1|960758_961532_-|chaperone-protein-PapD
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLIISNAGSKENETASGFKNLLIAPREKVTSPIKDASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>LS483434.1|SQH43614.1|960232_960733_-|Protein-sfmH-Flags:-Precursor
MLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTIGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>LS483434.1|SQH43613.1|959747_960233_-|fimbrial-subunit
MERFIVKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>LS483434.1|SQH43612.1|959214_959706_-|fimbrial-subunit
MLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ
>LS483434.1|SQH43624.1|972135_972375_+|Metallo-beta-lactamase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVP
>LS483434.1|SQH43625.1|972435_972933_+|beta-lactamase
MTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPLVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>LS483434.1|SQH43626.1|973020_973383_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LS483434.1|SQH43627.1|973806_975606_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMSGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LS483434.1|SQH43628.1|975605_977318_+|sulfite-reductase-subunit-beta
MSEKHLGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDQLIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LS483434.1|SQH43629.1|977393_978128_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAEANAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483434.1|SQH43630.1|978215_979169_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>LS483434.1|SQH43631.1|979613_982277_+|helicase
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>LS483434.1|SQH43632.1|982288_983848_+|crispr-associated-protein,-Cse1-family
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIGIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>LS483434.1|SQH43633.1|983844_984393_+|transposase
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD

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Crispr_ID: LS483434_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483434_2

988161-988860

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

11 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LS483434_2

>merge|LS483434|2|988161-988860|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGGACCTCCAGCGCCACTGCTAATATTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCTGTCCCGTACGAGATACTCCAGCGCCTGCCCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGATTATTCGCGAATTGAAGAGGCATTCAATGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGTTTTGTTTATTTAATTAAATCATTATCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTATTCAGTTTATTAAATTTTTCCGCCAAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTATTGCAACTACGGCTGACGCGCTGATCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACGAATTGAGACTATTAGAGATTATTCGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAACCCATTAATTAACTAAGCAGTAATAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTAACCAGGGGTTTTTCCCCACTATTTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGAAACAGAAACCGGATATGAGCCATCCATGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>LS483434|2|2|988161-988799|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGGACCTCCAGCGCCACTGCTAATATTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTCCCGTACGAGATACTCCAGCGCCTGCCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATTATTCGCGAATTGAAGAGGCATTCAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTTTTGTTTATTTAATTAAATCATTATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATTCAGTTTATTAAATTTTTCCGCCAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTATTGCAACTACGGCTGACGCGCTGATCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAAACAGAAACCGGATATGAGCCATCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>LS483434|2|2|988161-988860|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGGACCTCCAGCGCCACTGCTAATATTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTCCCGTACGAGATACTCCAGCGCCTGCCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATTATTCGCGAATTGAAGAGGCATTCAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTTTTGTTTATTTAATTAAATCATTATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATTCAGTTTATTAAATTTTTCCGCCAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTATTGCAACTACGGCTGACGCGCTGATCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAAACAGAAACCGGATATGAGCCATCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>LS483434|2|2|988161-988860|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGGACCTCCAGCGCCACTGCTAATATTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTCCCGTACGAGATACTCCAGCGCCTGCCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATTATTCGCGAATTGAAGAGGCATTCAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTTTTGTTTATTTAATTAAATCATTATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATTCAGTTTATTAAATTTTTCCGCCAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTATTGCAACTACGGCTGACGCGCTGATCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAAACAGAAACCGGATATGAGCCATCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483434.1\|SQH43637.1\|986850_987771_+\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LS483434.1\|SQH43636.1\|986203_986854_+\|CRISPR-associated-protein-Cse3-family	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
LS483434.1\|SQH43629.1\|977393_978128_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483434.1\|SQH43647.1\|995201_996251_+\|tRNA-pseudouridine-13-synthase	unknown	unknown	gnl\|CDD\|234884
LS483434.1\|SQH43635.1\|985475_986222_+\|CRISPR-associated-protein-Cas5e-family	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
LS483434.1\|SQH43642.1\|992515_993121_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LS483434.1\|SQH43639.1\|988874_989921_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LS483434.1\|SQH43645.1\|994015_994726_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LS483434.1\|SQH43630.1\|978215_979169_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483434.1\|SQH43634.1\|984406_985465_+\|CRISPR-associated-protein-Cse4	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
LS483434.1\|SQH43644.1\|993685_993997_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LS483434.1\|SQH43633.1\|983844_984393_+\|transposase	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
LS483434.1\|SQH43632.1\|982288_983848_+\|crispr-associated-protein,-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483434.1\|SQH43640.1\|990171_991080_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LS483434.1\|SQH43646.1\|994725_995205_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LS483434.1\|SQH43643.1\|993171_993495_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LS483434.1\|SQH43648.1\|996231_996993_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LS483434.1\|SQH43641.1\|991089_992529_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LS483434.1\|SQH43631.1\|979613_982277_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483434.1\|SQH43638.1\|987770_988064_+\|ssRNA-endonuclease	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930

Protein	Function_ID	Function_description	E-value
LS483434.1\|SQH43637.1\|986850_987771_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.63116e-157
LS483434.1\|SQH43636.1\|986203_986854_+\|CRISPR-associated-protein-Cse3-family	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	8.70215e-76
LS483434.1\|SQH43629.1\|977393_978128_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.14735e-139
LS483434.1\|SQH43647.1\|995201_996251_+\|tRNA-pseudouridine-13-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LS483434.1\|SQH43635.1\|985475_986222_+\|CRISPR-associated-protein-Cas5e-family	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.42782e-48
LS483434.1\|SQH43642.1\|992515_993121_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
LS483434.1\|SQH43639.1\|988874_989921_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LS483434.1\|SQH43645.1\|994015_994726_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
LS483434.1\|SQH43630.1\|978215_979169_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483434.1\|SQH43634.1\|984406_985465_+\|CRISPR-associated-protein-Cse4	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.76392e-133
LS483434.1\|SQH43644.1\|993685_993997_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
LS483434.1\|SQH43633.1\|983844_984393_+\|transposase	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.80691e-33
LS483434.1\|SQH43632.1\|982288_983848_+\|crispr-associated-protein,-Cse1-family	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	4.43834e-173
LS483434.1\|SQH43640.1\|990171_991080_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483434.1\|SQH43646.1\|994725_995205_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
LS483434.1\|SQH43643.1\|993171_993495_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
LS483434.1\|SQH43648.1\|996231_996993_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
LS483434.1\|SQH43641.1\|991089_992529_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483434.1\|SQH43631.1\|979613_982277_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
LS483434.1\|SQH43638.1\|987770_988064_+\|ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.3037e-64

>LS483434.1|SQH43638.1|987770_988064_+|ssRNA-endonuclease
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGCGNAVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>LS483434.1|SQH43637.1|986850_987771_+|CRISPR-associated-protein-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>LS483434.1|SQH43636.1|986203_986854_+|CRISPR-associated-protein-Cse3-family
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASTIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVLNDPALFLRRLAQGYGKSRAFGCGMMMIKPGDDA
>LS483434.1|SQH43635.1|985475_986222_+|CRISPR-associated-protein-Cas5e-family
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>LS483434.1|SQH43634.1|984406_985465_+|CRISPR-associated-protein-Cse4
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYVQETAFKDFNVMNQQGSMEDVLDFICA
>LS483434.1|SQH43633.1|983844_984393_+|transposase
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>LS483434.1|SQH43632.1|982288_983848_+|crispr-associated-protein,-Cse1-family
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIGIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>LS483434.1|SQH43631.1|979613_982277_+|helicase
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>LS483434.1|SQH43630.1|978215_979169_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>LS483434.1|SQH43629.1|977393_978128_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAEANAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483434.1|SQH43639.1|988874_989921_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>LS483434.1|SQH43640.1|990171_991080_+|Sulfate-adenylyltransferase-subunit-2-1
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LS483434.1|SQH43641.1|991089_992529_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVGYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACVGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LS483434.1|SQH43642.1|992515_993121_+|adenosine-5-phosphosulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>LS483434.1|SQH43643.1|993171_993495_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LS483434.1|SQH43644.1|993685_993997_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>LS483434.1|SQH43645.1|994015_994726_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>LS483434.1|SQH43646.1|994725_995205_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>LS483434.1|SQH43647.1|995201_996251_+|tRNA-pseudouridine-13-synthase
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLMLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLEKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>LS483434.1|SQH43648.1|996231_996993_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
LS483434_2	2.10\|988739\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988739-988770	32	NZ_CP022304	Thalassococcus sp. S3 plasmid pS3A, complete sequence	1984-2015	5	0.844
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	KT381864	Thiobacimonas phage vB_ThpS-P1, complete genome	6824-6855	6	0.812
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
LS483434_2	2.10\|988739\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988739-988770	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	328890-328921	6	0.812
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
LS483434_1	1.19\|971795\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971795-971826	32	NC_011774	Bacillus cereus G9842 plasmid pG9842_140, complete sequence	132214-132245	7	0.781
LS483434_2	2.1\|988190\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988190-988221	32	KT820175	Ruegeria phage 45A6, complete genome	6075-6106	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP053932	Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed1, complete sequence	2781-2812	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP009719	Bacillus thuringiensis strain HD682 plasmid pBGN_1, complete sequence	11068-11099	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP016597	Bacillus cereus strain K8 plasmid pBCK802, complete sequence	44732-44763	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP015327	Bacillus filamentosus strain Hbe603 plasmid pBEH5, complete sequence	12925-12956	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	10973-11004	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP010109	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence	13185-13216	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	127416-127447	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	93538-93569	7	0.781
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP015728	Bacillus cereus strain A1 plasmid pBCA2, complete sequence	1384-1415	7	0.781
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	JX100810	Caulobacter phage CcrColossus, complete genome	66602-66633	8	0.75
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NZ_CP027024	Streptomyces sp. WAC00288 plasmid p2, complete sequence	28699-28730	8	0.75
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NZ_CP027024	Streptomyces sp. WAC00288 plasmid p2, complete sequence	33575-33606	8	0.75
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	662709-662740	8	0.75
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NZ_AP022338	Mameliella alba strain KU6B plasmid pKUB257, complete sequence	31876-31907	8	0.75
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP045294	Paenibacillus guangzhouensis strain KCTC 33171 plasmid unnamed1, complete sequence	5427-5458	8	0.75
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	169304-169335	8	0.75
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	MN694565	Marine virus AFVG_250M316, complete genome	29824-29855	8	0.75
LS483434_1	1.14\|971490\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971490-971521	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
LS483434_1	1.15\|971551\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971551-971582	32	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	234396-234427	8	0.75
LS483434_1	1.15\|971551\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971551-971582	32	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	85616-85647	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	MN694758	Marine virus AFVG_250M853, complete genome	13463-13494	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	AP014372	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C19, * SEQUENCING IN PROGRESS *	6561-6592	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	MN694077	Marine virus AFVG_250M852, complete genome	13468-13499	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	100914-100945	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP044263	Campylobacter armoricus strain CA639 plasmid pCA639-2, complete sequence	12439-12470	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_007412	Trichormus variabilis ATCC 29413 plasmid C, complete sequence	106575-106606	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047244	Trichormus variabilis 0441 plasmid unnamed2, complete sequence	132942-132973	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	MN693441	Marine virus AFVG_25M481, complete genome	26639-26670	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_029006	Clostridium phage phiCT19406C, complete genome	336-367	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	KU878088	Bacillus phage AR9, complete genome	155964-155995	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	KM983333	Clostridium phage phiCTC2A, complete genome	13117-13148	8	0.75
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	KM983330	Clostridium phage phiCT19406A, complete genome	13117-13148	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP043846	Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence	8219-8250	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP030248	Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_2, complete sequence	7928-7959	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP009047	Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence	1747-1778	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_HG813244	Staphylococcus epidermidis PM221 plasmid 3, complete sequence	5322-5353	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP023971	Staphylococcus lugdunensis strain FDAARGOS_381 plasmid unnamed1, complete sequence	1686-1717	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP014116	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed4	4418-4449	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP014117	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed3, complete sequence	5393-5424	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP014120	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed2, complete sequence	1517-1548	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP034116	Staphylococcus epidermidis strain CDC121 plasmid pSTA481, complete sequence	3901-3932	8	0.75
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NZ_CP034113	Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence	16472-16503	8	0.75
LS483434_2	2.9\|988678\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988678-988709	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
LS483434_1	1.1\|970697\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970697-970728	32	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	263895-263926	9	0.719
LS483434_1	1.1\|970697\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970697-970728	32	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	269804-269835	9	0.719
LS483434_1	1.1\|970697\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970697-970728	32	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	264333-264364	9	0.719
LS483434_1	1.1\|970697\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970697-970728	32	NC_021908	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence	270335-270366	9	0.719
LS483434_1	1.1\|970697\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970697-970728	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	666544-666575	9	0.719
LS483434_1	1.3\|970819\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970819-970850	32	NZ_CP038238	Leisingera sp. NJS201 plasmid unnamed4, complete sequence	123952-123983	9	0.719
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NZ_CP017943	Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence	373313-373344	9	0.719
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	KR072689	Paracoccus phage Shpa, complete genome	1628-1659	9	0.719
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NC_048169	Gordonia phage BrutonGaster, complete genome	81137-81168	9	0.719
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP033895	Serratia liquefaciens strain FG3 plasmid p2-125, complete sequence	57012-57043	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	791786-791817	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	117389-117420	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	7410-7441	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	539474-539505	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	110359-110390	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_020385	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-328, complete sequence	109204-109235	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	325654-325685	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	MK448708	Streptococcus phage Javan23, complete genome	26375-26406	9	0.719
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	MK448897	Streptococcus phage Javan28, complete genome	26375-26406	9	0.719
LS483434_2	2.10\|988739\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988739-988770	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1929932-1929963	9	0.719
LS483434_2	2.10\|988739\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988739-988770	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1709399-1709430	9	0.719
LS483434_1	1.2\|970758\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970758-970789	32	NZ_CP009113	Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence	12124-12155	10	0.688
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	275507-275538	10	0.688
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NC_011982	Agrobacterium vitis S4 plasmid pTiS4, complete sequence	171092-171123	10	0.688
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NC_011982	Agrobacterium vitis S4 plasmid pTiS4, complete sequence	182501-182532	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP050075	Enterobacter kobei strain 070 plasmid p070_A-KPC-2, complete sequence	77373-77404	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KX868552	Klebsiella variicola strain H152460787 plasmid pJF-787, complete sequence	56928-56959	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KY020154	Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence	30037-30068	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KX786187	Enterobacter cloacae strain N14-0444 plasmid pIMI-6, complete sequence	147473-147504	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KY399975	Enterobacter cloacae strain EClY2403 plasmid pNDM1_EClY2403, complete sequence	72633-72664	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KY399974	Enterobacter cloacae strain EClY2402 plasmid pNDM1_EClY2402, complete sequence	72633-72664	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KY680213	Klebsiella aerogenes strain N15-1247 plasmid pN151247-1, complete sequence	41500-41531	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042356	Enterobacter cloacae strain 20ES plasmid pNDM_20ES, complete sequence	79377-79408	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	MN175388	Cronobacter sp. strain CR-13-12 plasmid pCR-13-12-NDM-1, complete sequence	67827-67858	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP034756	Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p2, complete sequence	43211-43242	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP016763	Citrobacter freundii strain B38 plasmid pOZ172, complete sequence	30411-30442	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KU987453	Klebsiella pneumoniae strain 05K0261 plasmid F5111, complete sequence	25402-25433	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KR351290	Klebsiella pneumoniae subsp. pneumoniae strain K351 plasmid pK351, complete sequence	56992-57023	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KJ812998	Enterobacter cloacae isolate GN574 plasmid pNDM-Ec1GN574, complete sequence	61012-61043	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KP900016	Leclercia adecarboxylata strain P10164 plasmid pP10164-NDM, complete sequence	81494-81525	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KT225520	Raoultella ornithinolytica strain RJ46C plasmid pRJ46C, complete sequence	102804-102835	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KP868647	Enterobacter cloacae strain WCHECl-14653 plasmid pNDM1_EC14653, complete sequence	72634-72665	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP026241	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-e790, complete sequence	19675-19706	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP029731	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed3, complete sequence	44914-44945	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP033468	Enterobacter cloacae strain E3442 plasmid p3442-IMI-2, complete sequence	60195-60226	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KC887916	Escherichia coli strain ARL10/167 isolate EC4 plasmid pEC4-NDM-6, complete sequence	61012-61043	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_KC887917	Enterobacter cloacae isolate ECL3 plasmid pECL3-NDM-1, complete sequence	55862-55893	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	CP044029	Klebsiella pneumoniae strain RJY9645 plasmid pY9645-166, complete sequence	65270-65301	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP042480	Citrobacter freundii strain C50 plasmid pC50_002, complete sequence	157944-157975	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP026551	Citrobacter sp. SL156 plasmid unnamed2	179053-179084	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NC_025184	Klebsiella pneumoniae strain RJF866 plasmid pRJF866, complete sequence	31359-31390	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP042483	Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence	125333-125364	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP035386	Enterobacter hormaechei strain S11_16 plasmid unnamed1, complete sequence	78286-78317	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	KU318419	Enterbacter aerogenes strain EA49 plasmid pEA49-KPC, complete sequence	62152-62183	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP022697	Citrobacter farmeri strain AUSMDU00008141 plasmid pAUSMDU8141-2, complete sequence	96302-96333	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP022350	Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence	25-56	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP035277	Citrobacter freundii strain R17 plasmid pCFR17_1, complete sequence	153841-153872	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP017850	Klebsiella variicola strain GJ2 plasmid pKPGJ-2a, complete sequence	56222-56253	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP017285	Klebsiella variicola strain GJ3 plasmid pKPGJ-3a, complete sequence	63600-63631	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP044035	Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed1, complete sequence	66357-66388	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP017283	Klebsiella variicola strain GJ1 plasmid pKPGJ-1a, complete sequence	76752-76783	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP042553	Enterobacter hormaechei strain C45 plasmid pC45_002, complete sequence	155302-155333	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NC_021501	Klebsiella michiganensis E718 plasmid pKOX_NDM1, complete sequence	79393-79424	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	MK933278	Enterobacter hormaechei strain SCNJ07 plasmid pNDM-SCNJ07, complete sequence	31359-31390	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP023914	Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed3, complete sequence	18697-18728	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP042519	Citrobacter freundii strain E33 plasmid pE33_002, complete sequence	157944-157975	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP018366	Klebsiella pneumoniae strain Kp_Goe_62629 plasmid pKp_Goe_629-2, complete sequence	26867-26898	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP023187	Klebsiella michiganensis strain K518 plasmid pK518_NDM1, complete sequence	38122-38153	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP040598	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid pKpvST15_NDM-1, complete sequence	26402-26433	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP014296	Klebsiella pneumoniae strain KP38731 plasmid unnamed11 sequence	15019-15050	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP043515	Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence	9062-9093	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	KT780723	Uncultured bacterium plasmid pGA45, complete sequence	57398-57429	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MH909344	Enterobacter cloacae strain 12949 plasmid p12949-FIIY, complete sequence	49192-49223	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MH909345	Klebsiella pneumoniae strain N201205880 plasmid p205880-NDM, complete sequence	92938-92969	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MK124610	Citrobacter werkmanii strain Cb_CB1_SE1_NDM_08_2017 plasmid pCB1_SE1_NDM, complete sequence	48140-48171	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MG462729	Escherichia coli strain AMA1742 plasmid pAMA1742, complete sequence	61013-61044	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MH325469	Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence	87754-87785	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP032893	Enterobacter kobei strain WCHEK045523 plasmid p1_045523, complete sequence	120889-120920	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP026698	Citrobacter koseri strain AR_0025 plasmid unitig_2_pilon, complete sequence	35609-35640	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_CP035537	Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-2, complete sequence	17211-17242	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042350	Klebsiella pneumoniae strain 18ES plasmid pNDM_18ES, complete sequence	79042-79073	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042354	Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence	79344-79375	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042353	Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence	78818-78849	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042351	Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence	78804-78835	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF190369	Enterobacter cloacae strain A1137 plasmid pA1137, complete sequence	50847-50878	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042358	Enterobacter cloacae strain 22ES plasmid pNDM_22ES, complete sequence	69008-69039	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042352	Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence	78805-78836	10	0.688
LS483434_1	1.10\|971246\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971246-971277	32	NZ_MF042357	Serratia marcescens strain 9580 plasmid pNDM_9580, complete sequence	74230-74261	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_KU525621	Bacillus anthracis strain P.NO2 plasmid pXO2, complete sequence	78893-78924	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NC_014332	Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, complete sequence	79665-79696	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NC_012577	Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence	77544-77575	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP015778	Bacillus anthracis strain Tangail-1 plasmid pXO2, complete sequence	79128-79159	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP018905	Bacillus anthracis strain Tyrol 4675 plasmid pXO2, complete sequence	79457-79488	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP023003	Bacillus anthracis strain 14RA5914 plasmid pX02, complete sequence	14517-14548	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_AP019733	Bacillus anthracis strain PCr plasmid PCr-pXO2	20358-20389	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_AP018445	Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence	79100-79131	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP029325	Bacillus anthracis strain 17OD930 plasmid pXO2, complete sequence	67398-67429	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NC_012655	Bacillus anthracis str. A0248 plasmid pXO2, complete sequence	80171-80202	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NC_007323	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence	79128-79159	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP010854	Bacillus anthracis strain A1144 plasmid pXO2, complete sequence	79281-79312	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP007617	Bacillus anthracis strain 2000031021 plasmid pXO2, complete sequence	54688-54719	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP008848	Bacillus anthracis strain HYU01 plasmid pX02, complete sequence	79032-79063	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP006744	Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence	79058-79089	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_AP014835	Bacillus anthracis strain Shikan-NIID plasmid pXO2	79118-79149	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP029807	Bacillus anthracis strain London_499 plasmid pX02, complete sequence	79258-79289	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NC_002146	Bacillus anthracis plasmid pXO2, complete sequence	79602-79633	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NC_017727	Bacillus anthracis str. H9401 plasmid BAP2, complete sequence	79114-79145	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009314	Bacillus anthracis str. Turkey32 strain 35 plasmid unnamed, complete sequence	85954-85985	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP014178	Bacillus anthracis strain Stendal plasmid pXO2, complete sequence	79128-79159	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009475	Bacillus anthracis strain Pasteur plasmid pXO2, complete sequence	6895-6926	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009900	Bacillus anthracis strain 2002013094 plasmid pXO2, complete sequence	64145-64176	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009339	Bacillus anthracis strain Ohio ACB plasmid 2, complete sequence	3596-3627	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009695	Bacillus anthracis strain RA3 plasmid pXO2, complete sequence	24682-24713	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009462	Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence	11833-11864	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009698	Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence	76311-76342	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009542	Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence	50230-50261	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP010320	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 2, complete sequence	21411-21442	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009329	Bacillus anthracis strain K3 plasmid 2, complete sequence	18573-18604	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009326	Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence	50180-50211	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP009979	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed2, complete sequence	89180-89211	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP001972	Bacillus anthracis str. A16 plasmid pXO2, complete sequence	79130-79161	10	0.688
LS483434_1	1.11\|971307\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971307-971338	32	NZ_CP047133	Bacillus anthracis str. BF1 plasmid pXO2, complete sequence	79042-79073	10	0.688
LS483434_1	1.16\|971612\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971612-971643	32	MN095771	Serratia phage Muldoon, complete genome	164379-164410	10	0.688
LS483434_1	1.19\|971795\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971795-971826	32	JN882284	Cronobacter phage vB_CsaM_GAP31, complete genome	52344-52375	10	0.688
LS483434_1	1.19\|971795\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971795-971826	32	NC_022968	Enterobacteria phage 4MG, complete genome	99273-99304	10	0.688
LS483434_2	2.2\|988251\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988251-988282	32	NC_006362	Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence	59028-59059	10	0.688
LS483434_2	2.2\|988251\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988251-988282	32	NZ_CP033380	Escherichia coli strain L73 plasmid pL73-3, complete sequence	13016-13047	10	0.688
LS483434_2	2.2\|988251\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988251-988282	32	NZ_CP033801	Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4	4423-4454	10	0.688
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP018843	Staphylococcus epidermidis strain 14.1.R1 plasmid pHOB1, complete sequence	987-1018	10	0.688
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP051648	Staphylococcus caprae strain SY333 plasmid pSY333-45, complete sequence	3883-3914	10	0.688
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	JX486088	Lactobacillus phage ATCC 8014-B2, complete genome	75847-75878	10	0.688
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	LR135896	uncultured phage genomic DNA containing rbcL region region	72577-72608	10	0.688
LS483434_2	2.5\|988434\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988434-988465	32	NC_049387	Escherichia virus P2_4B2 genome assembly, chromosome: 1	31143-31174	10	0.688
LS483434_1	1.5\|970941\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970941-970972	32	MH940212	Salmonella phage PS5, complete genome	91723-91754	11	0.656
LS483434_1	1.5\|970941\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970941-970972	32	NC_022772	Salmonella phage Marshall, complete genome	39779-39810	11	0.656
LS483434_1	1.5\|970941\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970941-970972	32	MH688040	Salmonella phage Mooltan, complete genome	39877-39908	11	0.656
LS483434_1	1.5\|970941\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	970941-970972	32	MN066127	Salmonella phage Matapan, complete genome	39865-39896	11	0.656
LS483434_1	1.9\|971185\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	971185-971216	32	NC_011991	Agrobacterium vitis S4 plasmid pAtS4b, complete sequence	85839-85870	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP019564	Staphylococcus aureus strain SR434 plasmid pSR01, complete sequence	2054-2085	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP012973	Staphylococcus aureus strain ST20130938 plasmid pST20130938, complete sequence	15056-15087	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP012980	Staphylococcus aureus strain ST20130940 plasmid pST20130940, complete sequence	15143-15174	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP012971	Staphylococcus aureus strain ST20130939 plasmid pST20130939, complete sequence	15056-15087	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP023562	Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence	5414-5445	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP029650	Staphylococcus aureus strain AR_0471 plasmid unnamed1, complete sequence	28845-28876	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_013290	Staphylococcus aureus plasmid pWBG750, complete sequence	16156-16187	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_013293	Staphylococcus aureus plasmid pWBG757, complete sequence	14287-14318	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_013301	Staphylococcus aureus plasmid SAP053A, complete sequence	6893-6924	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_013303	Staphylococcus aureus plasmid SAP072A, complete sequence	10714-10745	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_013304	Staphylococcus aureus plasmid SAP073A, complete sequence	19519-19550	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_013313	Staphylococcus aureus plasmid pWBG763, complete sequence	20149-20180	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_017339	Staphylococcus aureus subsp. aureus JKD6159 plasmid pSaa6159, complete sequence	11953-11984	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP017681	Staphylococcus aureus strain CFSAN007851 plasmid pCFSAN007851, complete sequence	549-580	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP019575	Staphylococcus aureus strain USA400-0051 plasmid unnamed, complete sequence	12607-12638	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	LC377537	Staphylococcus aureus plasmid pNTUH_1027 NTUH_1027 DNA, complete sequence	11954-11985	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	LC377539	Staphylococcus aureus plasmid pNTUH_6457 NTUH_6457 DNA, complete sequence	26448-26479	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP038230	Staphylococcus aureus strain MJ163 plasmid unnamed1, complete sequence	16459-16490	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_005951	Staphylococcus aureus subsp. aureus MSSA476 plasmid pSAS, complete sequence	17602-17633	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_LR130510	Staphylococcus aureus strain BPH2760 isolate BPH2760 plasmid 2	16003-16034	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	CP030478	Staphylococcus aureus strain ER02243.3 plasmid unnamed1, complete sequence	7914-7945	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP033976	Staphylococcus aureus strain P2D15C1 plasmid unnamed4, complete sequence	4038-4069	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP029083	Staphylococcus aureus strain AR464 plasmid unnamed1, complete sequence	11951-11982	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP015818	Staphylococcus aureus strain FORC_039 plasmid unnamed, complete sequence	31105-31136	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_005011	Staphylococcus aureus plasmid pMW2, complete sequence	11999-12030	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP023496	Staphylococcus simulans strain FDAARGOS_383 plasmid unnamed, complete sequence	108763-108794	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_018968	Staphylococcus aureus plasmid p18809-P04, complete sequence	22827-22858	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_AP018924	Staphylococcus aureus strain JMUB3031 plasmid pJMUB3031, complete sequence	13600-13631	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP023967	Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence	64987-65018	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NC_002517	Staphylococcus aureus plasmid p21, complete sequence	20508-20539	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047022	Staphylococcus aureus strain M2024 plasmid pl1_M2024, complete sequence	12143-12174	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047829	Staphylococcus aureus strain UP_1073 plasmid unnamed, complete sequence	12013-12044	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047812	Staphylococcus aureus strain UP_1522 plasmid unnamed, complete sequence	12013-12044	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP022719	Staphylococcus aureus strain 45 plasmid pPS00086.1A.1, complete sequence	17668-17699	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	CP027496	Staphylococcus aureus strain ST2594 isolate 004 plasmid unnamed1	13714-13745	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP042004	Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence	23429-23460	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047827	Staphylococcus aureus strain UP_1239 plasmid unnamed, complete sequence	12014-12045	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP020355	Staphylococcus aureus strain FORC59 plasmid pFORC59, complete sequence	17622-17653	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047846	Staphylococcus aureus strain UP_591 plasmid unnamed, complete sequence	11934-11965	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047838	Staphylococcus aureus strain UP_719 plasmid unnamed, complete sequence	11936-11967	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047844	Staphylococcus aureus strain UP_620 plasmid unnamed, complete sequence	12013-12044	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP047840	Staphylococcus aureus strain UP_678 plasmid unnamed, complete sequence	16585-16616	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP043844	Staphylococcus aureus strain NCCP 16830 plasmid unnamed, complete sequence	18301-18332	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP038184	Staphylococcus aureus strain MJ015 plasmid unnamed1, complete sequence	10202-10233	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP042287	Staphylococcus argenteus strain B3-25B plasmid pSALNBL21, complete sequence	6742-6773	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_MH785247	Staphylococcus aureus strain tu2 plasmid pMW2, complete sequence	11998-12029	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_MH785254	Staphylococcus aureus strain ch24 plasmid pMW2, complete sequence	11998-12029	11	0.656
LS483434_2	2.4\|988373\|32\|LS483434\|PILER-CR,CRISPRCasFinder,CRT	988373-988404	32	NZ_CP024999	Staphylococcus aureus strain 55-99-44 plasmid punamed1, complete sequence	15640-15671	11	0.656
LS483434_2	2.11\|988800\|32\|LS483434\|CRISPRCasFinder,CRT	988800-988831	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

2. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

3. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

4. spacer 2.10|988739|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022304 (Thalassococcus sp. S3 plasmid pS3A, complete sequence) position: , mismatch: 5, identity: 0.844

gcagaaacagaaaccggatatgagcc-atccat	CRISPR spacer
gaagagacagaaaccggctatgagctgatcca-	Protospacer
* ***.*********** *******. *****

5. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KT381864 (Thiobacimonas phage vB_ThpS-P1, complete genome) position: , mismatch: 6, identity: 0.812

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
gcccgcgaggagatcgagatgcctgaggggct	Protospacer
  ******** ***********.******  *

6. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

7. spacer 2.10|988739|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 6, identity: 0.812

gcagaaacagaaaccggatatgagccatccat	CRISPR spacer
tgacgaacagaaaccggatatgaggcatccct	Protospacer
  * .******************* ***** *

8. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

9. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

10. spacer 1.19|971795|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_011774 (Bacillus cereus G9842 plasmid pG9842_140, complete sequence) position: , mismatch: 7, identity: 0.781

tctggtggctgcctcatattgttgcgcatcta	CRISPR spacer
tacgttcactgcctcatattgttgggcattta	Protospacer
* .* * .**************** ****.**

11. spacer 2.1|988190|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KT820175 (Ruegeria phage 45A6, complete genome) position: , mismatch: 7, identity: 0.781

-gcgggacctccagcgccactgctaatattcgt	CRISPR spacer
cgccgaa-gtccaacgccactgctgatattcgg	Protospacer
 ** *.*  ****.**********.*******

12. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053932 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aatatttgtttatttaattatattattatcgg	Protospacer
    **************** **.******.*

13. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009719 (Bacillus thuringiensis strain HD682 plasmid pBGN_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aatatttgtttatttaattatattattatcgg	Protospacer
    **************** **.******.*

14. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016597 (Bacillus cereus strain K8 plasmid pBCK802, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttg---tttatttaattaaatcattatcag	CRISPR spacer
---tttcgaatcttatttatataaatcattatcag	Protospacer
   ***.*   .*******  **************

15. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015327 (Bacillus filamentosus strain Hbe603 plasmid pBEH5, complete sequence) position: , mismatch: 7, identity: 0.781

----ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
actctcgttttg----tttaattaaatcattttcaa	Protospacer
    *.******    *************** ***.

16. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttg---tttatttaattaaatcattatcag	CRISPR spacer
---tttcgagtcttacttatttaaatcattatcag	Protospacer
   ***.*   .***.*** ***************

17. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010109 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttg---tttatttaattaaatcattatcag	CRISPR spacer
---tttcgaatcttatttatataaatcattatcag	Protospacer
   ***.*   .*******  **************

18. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttg---tttatttaattaaatcattatcag	CRISPR spacer
---tttcgagtcttacttatttaaatcattatcag	Protospacer
   ***.*   .***.*** ***************

19. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttg---tttatttaattaaatcattatcag	CRISPR spacer
---tttcgagtcttacttatttaaatcattatcag	Protospacer
   ***.*   .***.*** ***************

20. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015728 (Bacillus cereus strain A1 plasmid pBCA2, complete sequence) position: , mismatch: 7, identity: 0.781

ttgttttg---tttatttaattaaatcattatcag	CRISPR spacer
---tttcgaatcttatttatataaatcattatcag	Protospacer
   ***.*   .*******  **************

21. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to JX100810 (Caulobacter phage CcrColossus, complete genome) position: , mismatch: 8, identity: 0.75

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
tcgggcgagacgatcgagatgcttgagggttg	Protospacer
.   *****..*******************

22. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027024 (Streptomyces sp. WAC00288 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
gcccgccaggtgatcgagatgctcgagcccct	Protospacer
  **** ****************.***  . *

23. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027024 (Streptomyces sp. WAC00288 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
gcccgccaggtgatcgagatgctcgagcccct	Protospacer
  **** ****************.***  . *

24. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
cgccgcaaggtgatcgagctgctgcgcggcct	Protospacer
******.*********** ****  . **. *

25. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022338 (Mameliella alba strain KU6B plasmid pKUB257, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
gatcgcgagcggatcgagatgcttgaccgttt	Protospacer
 ..******  ***************  ** *

26. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045294 (Paenibacillus guangzhouensis strain KCTC 33171 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
atatcacgaagagcggcaaaaaagaagcagag	Protospacer
.**** ********* ********  * *. *

27. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 8, identity: 0.75

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
atatctcgaaaagagtcaaaaaaggctagatt	Protospacer
.*********.** ********** * ..**

28. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN694565 (Marine virus AFVG_250M316, complete genome) position: , mismatch: 8, identity: 0.75

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaccatgagtgctactgctgtcaaaccataaa	Protospacer
.. **************** **** **. **.

29. spacer 1.14|971490|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

30. spacer 1.15|971551|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

----ccatttttgatcatctcctccagcctgctgag	CRISPR spacer
ggtaaca----cgatcgtctcttccagcctgctgag	Protospacer
     **    .****.****.**************

31. spacer 1.15|971551|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.75

ccatttttgatcatctcctccagcctgctgag	CRISPR spacer
taatttttgttcatctcttccagccttatcat	Protospacer
. ******* *******.********  * *

32. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
agatgattttaatttaattaaatcattagcag	Protospacer
  .*  * ** ***************** ***

33. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to AP014372 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C19, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
atcgtaaatttgtttaattaaatctttatcag	Protospacer
 *  *  .***.************ *******

34. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
agatgattttaatttaattaaatcattagcag	Protospacer
  .*  * ** ***************** ***

35. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ttgttttgttttttaaattaaatttttgaaat	Protospacer
*********** ** ********. **.  *

36. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044263 (Campylobacter armoricus strain CA639 plasmid pCA639-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ttgttttgtttatttattttaatgaagatatt	Protospacer
**************** ** *** *  **

37. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_007412 (Trichormus variabilis ATCC 29413 plasmid C, complete sequence) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcatt--atcag	CRISPR spacer
--tatttctttatttaattaaataatcaaatcaa	Protospacer
    *** *************** **.  ****.

38. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047244 (Trichormus variabilis 0441 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcatt--atcag	CRISPR spacer
--tatttctttatttaattaaataatcaaatcaa	Protospacer
    *** *************** **.  ****.

39. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN693441 (Marine virus AFVG_25M481, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ttgttttgtatattttattaaatatttcttga	Protospacer
********* ***** *******  ** *...

40. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_029006 (Clostridium phage phiCT19406C, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tctatctgtttctttaattaaattattataat	Protospacer
*.  *.***** ***********.***** *

41. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tctttttatatatttaattaaatcatctttat	Protospacer
*. ****.* ****************. *.*

42. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KM983333 (Clostridium phage phiCTC2A, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ttgttttgtttaattaattatatttgtttatg	Protospacer
************ ******* **.  * *  *

43. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KM983330 (Clostridium phage phiCT19406A, complete genome) position: , mismatch: 8, identity: 0.75

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ttgttttgtttaattaattatatttgtttatg	Protospacer
************ ******* **.  * *  *

44. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043846 (Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

45. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030248 (Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_2, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

46. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009047 (Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

47. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG813244 (Staphylococcus epidermidis PM221 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

48. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023971 (Staphylococcus lugdunensis strain FDAARGOS_381 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

49. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014116 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed4) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

50. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014117 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

51. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014120 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

52. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034116 (Staphylococcus epidermidis strain CDC121 plasmid pSTA481, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

53. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034113 (Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence) position: , mismatch: 8, identity: 0.75

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

54. spacer 2.9|988678|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

ggttaaccaggggtttttccccactatttcgc	CRISPR spacer
aggtaacgaggggtttttccccaatattgaaa	Protospacer
.* **** *************** ****  .

55. spacer 1.1|970697|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtcatgcggcgctgcgagcgtgcggccttt	CRISPR spacer
aatttctgcgacgctgcgagcgcgcggccgat	Protospacer
   *. ****.***********.******  *

56. spacer 1.1|970697|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtcatgcggcgctgcgagcgtgcggccttt	CRISPR spacer
aatttctgcgacgctgcgagcgcgcggccgat	Protospacer
   *. ****.***********.******  *

57. spacer 1.1|970697|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtcatgcggcgctgcgagcgtgcggccttt	CRISPR spacer
aatttctgcgacgctgcgagcgcgcggccgat	Protospacer
   *. ****.***********.******  *

58. spacer 1.1|970697|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtcatgcggcgctgcgagcgtgcggccttt	CRISPR spacer
aatttctgcgacgctgcgagcgcgcggccgat	Protospacer
   *. ****.***********.******  *

59. spacer 1.1|970697|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtcatgcggcgctgcgagcgtgcggccttt	CRISPR spacer
cctctatgcggcgctgcgagcgggccgcgtgt	Protospacer
.. ..***************** ** ** * *

60. spacer 1.3|970819|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038238 (Leisingera sp. NJS201 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cctgactgccgccggtgtaggtggcgaatgca	CRISPR spacer
gcagaccgccgccggtgcaggtggcggcgccg	Protospacer
 * ***.**********.********.   *.

61. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
cgcagcgacgtgatcgagatgctgaaaagcga	Protospacer
*** **** ************** .*..*..

62. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KR072689 (Paracoccus phage Shpa, complete genome) position: , mismatch: 9, identity: 0.719

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
gacggcggggtgatcgagatccttgagcgggg	Protospacer
 .* ***.************ ****** * .

63. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_048169 (Gordonia phage BrutonGaster, complete genome) position: , mismatch: 9, identity: 0.719

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
cgcagcgaggtcatcgagatgctgacggagca	Protospacer
*** ******* *********** . **.

64. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033895 (Serratia liquefaciens strain FG3 plasmid p2-125, complete sequence) position: , mismatch: 9, identity: 0.719

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgttg	Protospacer
   ****** *****.**********. . **

65. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
agcatttatttctttaattaaatcatttactg	Protospacer
    ***.*** ***************  * *

66. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ttgctttgtttatttaataaaataaagaaata	Protospacer
***.************** **** *  *   .

67. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tttcaggacttacttaattaaagcattatcag	Protospacer
** .   ..***.********* *********

68. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tttcaggacttacttaattaaagcattatcag	Protospacer
** .   ..***.********* *********

69. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tttcaggacttacttaattaaagcattatcag	Protospacer
** .   ..***.********* *********

70. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_020385 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-328, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tttcaggacttacttaattaaagcattatcag	Protospacer
** .   ..***.********* *********

71. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
tttcaggacttacttaattaaagcattatcag	Protospacer
** .   ..***.********* *********

72. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MK448708 (Streptococcus phage Javan23, complete genome) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aagttttgttgatttacttaaatcaccattca	Protospacer
  ******** ***** ********..**. .

73. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MK448897 (Streptococcus phage Javan28, complete genome) position: , mismatch: 9, identity: 0.719

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aagttttgttgatttacttaaatcaccattca	Protospacer
  ******** ***** ********..**. .

74. spacer 2.10|988739|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaaacagaaaccggatatgagccatccat	CRISPR spacer
ggtcacccagaaaccggaaatgagccagccga	Protospacer
*   *  *********** ******** **.

75. spacer 2.10|988739|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaaacagaaaccggatatgagccatccat	CRISPR spacer
ggtcacccagaaaccggaaatgagccagccga	Protospacer
*   *  *********** ******** **.

76. spacer 1.2|970758|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009113 (Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence) position: , mismatch: 10, identity: 0.688

cgtccaatacgagccgagtgcgcacgccctta	CRISPR spacer
cacgggtaacgagccgagtgcgttcgcccttg	Protospacer
*..  .  **************. *******.

77. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
ggccgcgaggtgatcgaggcgcttggccccga	Protospacer
 *****************..*****.   ..

78. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 10, identity: 0.688

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
ttgaaggagctgatcgagacgcttgagggtca	Protospacer
.   . *** *********.**********

79. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 10, identity: 0.688

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
ttgaaggagctgatcgagacgcttgagggtca	Protospacer
.   . *** *********.**********

80. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050075 (Enterobacter kobei strain 070 plasmid p070_A-KPC-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

81. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX868552 (Klebsiella variicola strain H152460787 plasmid pJF-787, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

82. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY020154 (Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

83. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX786187 (Enterobacter cloacae strain N14-0444 plasmid pIMI-6, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

84. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY399975 (Enterobacter cloacae strain EClY2403 plasmid pNDM1_EClY2403, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

85. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY399974 (Enterobacter cloacae strain EClY2402 plasmid pNDM1_EClY2402, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

86. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY680213 (Klebsiella aerogenes strain N15-1247 plasmid pN151247-1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

87. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042356 (Enterobacter cloacae strain 20ES plasmid pNDM_20ES, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

88. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN175388 (Cronobacter sp. strain CR-13-12 plasmid pCR-13-12-NDM-1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

89. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034756 (Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

90. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016763 (Citrobacter freundii strain B38 plasmid pOZ172, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

91. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU987453 (Klebsiella pneumoniae strain 05K0261 plasmid F5111, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

92. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KR351290 (Klebsiella pneumoniae subsp. pneumoniae strain K351 plasmid pK351, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

93. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ812998 (Enterobacter cloacae isolate GN574 plasmid pNDM-Ec1GN574, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

94. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP900016 (Leclercia adecarboxylata strain P10164 plasmid pP10164-NDM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

95. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT225520 (Raoultella ornithinolytica strain RJ46C plasmid pRJ46C, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

96. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP868647 (Enterobacter cloacae strain WCHECl-14653 plasmid pNDM1_EC14653, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

97. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026241 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-e790, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

98. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029731 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

99. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033468 (Enterobacter cloacae strain E3442 plasmid p3442-IMI-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

100. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KC887916 (Escherichia coli strain ARL10/167 isolate EC4 plasmid pEC4-NDM-6, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

101. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KC887917 (Enterobacter cloacae isolate ECL3 plasmid pECL3-NDM-1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

102. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to CP044029 (Klebsiella pneumoniae strain RJY9645 plasmid pY9645-166, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

103. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042480 (Citrobacter freundii strain C50 plasmid pC50_002, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

104. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026551 (Citrobacter sp. SL156 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

105. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_025184 (Klebsiella pneumoniae strain RJF866 plasmid pRJF866, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

106. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042483 (Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

107. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035386 (Enterobacter hormaechei strain S11_16 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

108. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KU318419 (Enterbacter aerogenes strain EA49 plasmid pEA49-KPC, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

109. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022697 (Citrobacter farmeri strain AUSMDU00008141 plasmid pAUSMDU8141-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

110. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022350 (Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

111. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035277 (Citrobacter freundii strain R17 plasmid pCFR17_1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

112. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017850 (Klebsiella variicola strain GJ2 plasmid pKPGJ-2a, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

113. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017285 (Klebsiella variicola strain GJ3 plasmid pKPGJ-3a, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

114. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044035 (Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

115. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017283 (Klebsiella variicola strain GJ1 plasmid pKPGJ-1a, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

116. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042553 (Enterobacter hormaechei strain C45 plasmid pC45_002, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

117. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_021501 (Klebsiella michiganensis E718 plasmid pKOX_NDM1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

118. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MK933278 (Enterobacter hormaechei strain SCNJ07 plasmid pNDM-SCNJ07, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

119. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023914 (Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

120. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042519 (Citrobacter freundii strain E33 plasmid pE33_002, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

121. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018366 (Klebsiella pneumoniae strain Kp_Goe_62629 plasmid pKp_Goe_629-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

122. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023187 (Klebsiella michiganensis strain K518 plasmid pK518_NDM1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

123. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040598 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid pKpvST15_NDM-1, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

124. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014296 (Klebsiella pneumoniae strain KP38731 plasmid unnamed11 sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

125. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043515 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

126. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to KT780723 (Uncultured bacterium plasmid pGA45, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

127. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH909344 (Enterobacter cloacae strain 12949 plasmid p12949-FIIY, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

128. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH909345 (Klebsiella pneumoniae strain N201205880 plasmid p205880-NDM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

129. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK124610 (Citrobacter werkmanii strain Cb_CB1_SE1_NDM_08_2017 plasmid pCB1_SE1_NDM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

130. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG462729 (Escherichia coli strain AMA1742 plasmid pAMA1742, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

131. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH325469 (Enterobacter hormaechei strain Ec13 plasmid pEc13, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

132. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032893 (Enterobacter kobei strain WCHEK045523 plasmid p1_045523, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

133. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026698 (Citrobacter koseri strain AR_0025 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

134. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035537 (Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

135. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042350 (Klebsiella pneumoniae strain 18ES plasmid pNDM_18ES, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

136. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042354 (Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

137. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042353 (Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

138. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042351 (Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

139. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF190369 (Enterobacter cloacae strain A1137 plasmid pA1137, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

140. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042358 (Enterobacter cloacae strain 22ES plasmid pNDM_22ES, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

141. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042352 (Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

142. spacer 1.10|971246|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042357 (Serratia marcescens strain 9580 plasmid pNDM_9580, complete sequence) position: , mismatch: 10, identity: 0.688

gtatctcgaagagcgtcaaaaaagccggaatg	CRISPR spacer
tgttctcgatgagcgccaaaaaagccatgctc	Protospacer
   ****** *****.**********. . *

143. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU525621 (Bacillus anthracis strain P.NO2 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

144. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_014332 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

145. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_012577 (Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

146. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015778 (Bacillus anthracis strain Tangail-1 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

147. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018905 (Bacillus anthracis strain Tyrol 4675 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

148. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023003 (Bacillus anthracis strain 14RA5914 plasmid pX02, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

149. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019733 (Bacillus anthracis strain PCr plasmid PCr-pXO2) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

150. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018445 (Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

151. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029325 (Bacillus anthracis strain 17OD930 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

152. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_012655 (Bacillus anthracis str. A0248 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

153. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_007323 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

154. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010854 (Bacillus anthracis strain A1144 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

155. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007617 (Bacillus anthracis strain 2000031021 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

156. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008848 (Bacillus anthracis strain HYU01 plasmid pX02, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

157. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006744 (Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

158. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014835 (Bacillus anthracis strain Shikan-NIID plasmid pXO2) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

159. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029807 (Bacillus anthracis strain London_499 plasmid pX02, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

160. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_002146 (Bacillus anthracis plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

161. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_017727 (Bacillus anthracis str. H9401 plasmid BAP2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

162. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009314 (Bacillus anthracis str. Turkey32 strain 35 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

163. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014178 (Bacillus anthracis strain Stendal plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

164. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009475 (Bacillus anthracis strain Pasteur plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

165. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009900 (Bacillus anthracis strain 2002013094 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

166. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009339 (Bacillus anthracis strain Ohio ACB plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

167. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009695 (Bacillus anthracis strain RA3 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

168. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009462 (Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

169. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009698 (Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

170. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009542 (Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

171. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010320 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

172. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009329 (Bacillus anthracis strain K3 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

173. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009326 (Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

174. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009979 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

175. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP001972 (Bacillus anthracis str. A16 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

176. spacer 1.11|971307|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047133 (Bacillus anthracis str. BF1 plasmid pXO2, complete sequence) position: , mismatch: 10, identity: 0.688

gggcatgagtgctactgctttcaacccgaaag	CRISPR spacer
aaatccaaatgctattgcttttaacccgaaag	Protospacer
.... ..*.*****.******.**********

177. spacer 1.16|971612|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN095771 (Serratia phage Muldoon, complete genome) position: , mismatch: 10, identity: 0.688

gattgttcagattgggaatttgaccaacgccc	CRISPR spacer
tgctgttcagattggcactttgaccagtgatg	Protospacer
 ..************ * ********..* .

178. spacer 1.19|971795|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to JN882284 (Cronobacter phage vB_CsaM_GAP31, complete genome) position: , mismatch: 10, identity: 0.688

tctggtggctgcctcatattgttgcgcatcta	CRISPR spacer
gtgattacctgcctcatattgttggggatctt	Protospacer
 . . *. **************** * ****

179. spacer 1.19|971795|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_022968 (Enterobacteria phage 4MG, complete genome) position: , mismatch: 10, identity: 0.688

tctggtggctgcctcatattgttgcgcatcta	CRISPR spacer
gtgattacctgcctcatattgttggggatctt	Protospacer
 . . *. **************** * ****

180. spacer 2.2|988251|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_006362 (Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence) position: , mismatch: 10, identity: 0.688

gtcccgtacgagatactccagcgcctgcccgc	CRISPR spacer
acggtgcgcgagatcctcgagcgcctgcccga	Protospacer
..  .*..****** *** ************

181. spacer 2.2|988251|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033380 (Escherichia coli strain L73 plasmid pL73-3, complete sequence) position: , mismatch: 10, identity: 0.688

gtcccgtacgagatactccagcgcctgcccgc	CRISPR spacer
cgccagtacgagctactccagcgccacgcgag	Protospacer
  ** ******* ************   * .

182. spacer 2.2|988251|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033801 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4) position: , mismatch: 10, identity: 0.688

gtcccgtacgagatactccagcgcctgcccgc	CRISPR spacer
cgccagtacgagctactccagcgccacgcgag	Protospacer
  ** ******* ************   * .

183. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018843 (Staphylococcus epidermidis strain 14.1.R1 plasmid pHOB1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ataaattgttattttaattaaatcattaatct	Protospacer
 *.  *****  **************** .

184. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051648 (Staphylococcus caprae strain SY333 plasmid pSY333-45, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
ataaattgttattttaattaaatcattaatct	Protospacer
 *.  *****  **************** .

185. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to JX486088 (Lactobacillus phage ATCC 8014-B2, complete genome) position: , mismatch: 10, identity: 0.688

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaagtttgtttatttaaaaaaatcattttgca	Protospacer
  . *************  ******** *  .

186. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to LR135896 (uncultured phage genomic DNA containing rbcL region region) position: , mismatch: 10, identity: 0.688

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
attattcggtctattaaatttttcaaatatac	Protospacer
.******.**.************* . .* ..

187. spacer 2.5|988434|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_049387 (Escherichia virus P2_4B2 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
ttggcacattttatgaaatttttccgccagca	Protospacer
 * .. ** ***** **************.

188. spacer 1.5|970941|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MH940212 (Salmonella phage PS5, complete genome) position: , mismatch: 11, identity: 0.656

aaaacggattctggtggagtaaatcaaatcag	CRISPR spacer
ctgggagattctggtggagtatattaaatatt	Protospacer
  .. .*************** **.****

189. spacer 1.5|970941|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_022772 (Salmonella phage Marshall, complete genome) position: , mismatch: 11, identity: 0.656

aaaacggattctggtggagtaaatcaaatcag	CRISPR spacer
ctgggagattctggtggagtatattaaatatt	Protospacer
  .. .*************** **.****

190. spacer 1.5|970941|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MH688040 (Salmonella phage Mooltan, complete genome) position: , mismatch: 11, identity: 0.656

aaaacggattctggtggagtaaatcaaatcag	CRISPR spacer
ctgggagattctggtggagtatattaaatatt	Protospacer
  .. .*************** **.****

191. spacer 1.5|970941|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to MN066127 (Salmonella phage Matapan, complete genome) position: , mismatch: 11, identity: 0.656

aaaacggattctggtggagtaaatcaaatcag	CRISPR spacer
ctgggagattctggtggagtatattaaatatt	Protospacer
  .. .*************** **.****

192. spacer 1.9|971185|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_011991 (Agrobacterium vitis S4 plasmid pAtS4b, complete sequence) position: , mismatch: 11, identity: 0.656

cgccgcgaggtgatcgagatgcttgagggtat	CRISPR spacer
ttgaaggagctgatcgagaagcttgaggggca	Protospacer
.   . *** ********* *********

193. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019564 (Staphylococcus aureus strain SR434 plasmid pSR01, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

194. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012973 (Staphylococcus aureus strain ST20130938 plasmid pST20130938, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

195. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012980 (Staphylococcus aureus strain ST20130940 plasmid pST20130940, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

196. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012971 (Staphylococcus aureus strain ST20130939 plasmid pST20130939, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

197. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

198. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029650 (Staphylococcus aureus strain AR_0471 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

199. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_013290 (Staphylococcus aureus plasmid pWBG750, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

200. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_013293 (Staphylococcus aureus plasmid pWBG757, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

201. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_013301 (Staphylococcus aureus plasmid SAP053A, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

202. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_013303 (Staphylococcus aureus plasmid SAP072A, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

203. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_013304 (Staphylococcus aureus plasmid SAP073A, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

204. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_013313 (Staphylococcus aureus plasmid pWBG763, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

205. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_017339 (Staphylococcus aureus subsp. aureus JKD6159 plasmid pSaa6159, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

206. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017681 (Staphylococcus aureus strain CFSAN007851 plasmid pCFSAN007851, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

207. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019575 (Staphylococcus aureus strain USA400-0051 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

208. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to LC377537 (Staphylococcus aureus plasmid pNTUH_1027 NTUH_1027 DNA, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

209. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to LC377539 (Staphylococcus aureus plasmid pNTUH_6457 NTUH_6457 DNA, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

210. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038230 (Staphylococcus aureus strain MJ163 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

211. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_005951 (Staphylococcus aureus subsp. aureus MSSA476 plasmid pSAS, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

212. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR130510 (Staphylococcus aureus strain BPH2760 isolate BPH2760 plasmid 2) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

213. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to CP030478 (Staphylococcus aureus strain ER02243.3 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

214. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033976 (Staphylococcus aureus strain P2D15C1 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

215. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029083 (Staphylococcus aureus strain AR464 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

216. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015818 (Staphylococcus aureus strain FORC_039 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

217. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_005011 (Staphylococcus aureus plasmid pMW2, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

218. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023496 (Staphylococcus simulans strain FDAARGOS_383 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

219. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_018968 (Staphylococcus aureus plasmid p18809-P04, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

220. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018924 (Staphylococcus aureus strain JMUB3031 plasmid pJMUB3031, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

221. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023967 (Staphylococcus capitis strain FDAARGOS_378 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

222. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NC_002517 (Staphylococcus aureus plasmid p21, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

223. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047022 (Staphylococcus aureus strain M2024 plasmid pl1_M2024, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

224. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047829 (Staphylococcus aureus strain UP_1073 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

225. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047812 (Staphylococcus aureus strain UP_1522 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

226. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022719 (Staphylococcus aureus strain 45 plasmid pPS00086.1A.1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

227. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to CP027496 (Staphylococcus aureus strain ST2594 isolate 004 plasmid unnamed1) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

228. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042004 (Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

229. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047827 (Staphylococcus aureus strain UP_1239 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

230. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020355 (Staphylococcus aureus strain FORC59 plasmid pFORC59, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

231. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047846 (Staphylococcus aureus strain UP_591 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

232. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047838 (Staphylococcus aureus strain UP_719 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

233. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047844 (Staphylococcus aureus strain UP_620 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

234. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047840 (Staphylococcus aureus strain UP_678 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

235. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043844 (Staphylococcus aureus strain NCCP 16830 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

236. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038184 (Staphylococcus aureus strain MJ015 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

237. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042287 (Staphylococcus argenteus strain B3-25B plasmid pSALNBL21, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

238. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH785247 (Staphylococcus aureus strain tu2 plasmid pMW2, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

239. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH785254 (Staphylococcus aureus strain ch24 plasmid pMW2, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

240. spacer 2.4|988373|32|LS483434|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024999 (Staphylococcus aureus strain 55-99-44 plasmid punamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttgttttgtttatttaattaaatcattatcag	CRISPR spacer
aaacaaagtttattaaatcaaatcattatcgt	Protospacer
  ..   ******* ***.***********.

241. spacer 2.11|988800|32|LS483434|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

649685 : 686127

Cronobacter_phage(69.44%)

plate,capsid,integrase,tail,terminase

attL 646162:646177|attR 656278:656293

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
646162:646177	attL	NA	NA	NA	NA
SQH43318.1\|649685_651251_+	Methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-13	37.0
SQH43319.1\|651247_651892_-	transcriptional regulator	NA	NA	NA	NA
SQH43320.1\|652126_652894_+	siderophore-interacting protein	NA	NA	NA	NA
SQH43321.1\|653117_653645_-	Uncharacterised protein	NA	NA	NA	NA
SQH43322.1\|653641_654673_-\|integrase	phage integrase family protein	A0A218M4I3	Erwinia_phage	4.9e-117	59.8
SQH43323.1\|654672_655260_-	repressor protein	A0A218M4J1	Erwinia_phage	1.5e-33	42.6
SQH43324.1\|655397_655619_+	Uncharacterised protein	NA	NA	NA	NA
SQH43325.1\|655649_656153_+	phage protein	F1BUN6	Cronobacter_phage	7.0e-61	73.1
SQH43326.1\|656162_656336_+	Uncharacterised protein	NA	NA	NA	NA
656278:656293	attR	NA	NA	NA	NA
SQH43327.1\|656344_656773_+	Uncharacterised protein	F1BUN5	Cronobacter_phage	2.3e-28	55.7
SQH43328.1\|656772_657174_+	Uncharacterised protein	F1BUN2	Cronobacter_phage	1.3e-49	67.7
SQH43329.1\|657241_657475_+	Protein of uncharacterised function (DUF2732)	NA	NA	NA	NA
SQH43330.1\|657465_658032_+	Eaa protein	A0A076GCP4	Escherichia_phage	8.9e-12	43.2
SQH43331.1\|658031_658361_+	gp91	C9E2N9	Enterococcus_phage	1.7e-10	44.7
SQH43332.1\|658350_659211_+	putative phage gene	F1BUN1	Cronobacter_phage	6.0e-129	81.0
SQH43333.1\|659207_661229_+	Phage replication protein	F1BUM9	Cronobacter_phage	6.7e-296	74.2
SQH43334.1\|661348_661555_+	Uncharacterised protein	NA	NA	NA	NA
SQH43335.1\|661528_661798_-	zinc-finger protein	F1BUM8	Cronobacter_phage	5.1e-42	94.3
SQH43336.1\|661848_662910_-	Membrane protein	F1BUM7	Cronobacter_phage	2.3e-162	77.1
SQH43337.1\|662906_664682_-\|terminase	Phage terminase ATPase subunit	F1BUM5	Cronobacter_phage	7.5e-291	83.1
SQH43338.1\|664841_665645_+\|capsid	putative capsid scaffolding protein	F1BUM4	Cronobacter_phage	1.6e-78	56.0
SQH43339.1\|665706_666729_+\|capsid	Phage major capsid protein	F1BUM2	Cronobacter_phage	1.1e-158	81.2
SQH43340.1\|666732_667434_+\|terminase	phage terminase subunit	F1BUM0	Cronobacter_phage	9.4e-88	66.8
SQH43341.1\|667479_667983_+	putative phage gene	F1BUL8	Cronobacter_phage	5.2e-64	82.0
SQH43342.1\|667979_668486_+	putative phage gene	F1BUL7	Cronobacter_phage	1.5e-63	69.1
SQH43343.1\|668482_669190_+	Phage virion morphogenesis protein	F1BUL6	Cronobacter_phage	1.5e-101	76.5
SQH43344.1\|669186_670314_+	Topoisomerase IA	F1BUL5	Cronobacter_phage	1.9e-175	83.7
SQH43345.1\|670310_670766_+	phage protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
SQH43346.1\|670775_671069_+	Holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
SQH43347.1\|671065_671407_+	hypothetical phage-related protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
SQH43348.1\|671406_671739_+	putative phage-related protein	F1BUL2	Cronobacter_phage	2.6e-35	70.0
SQH43349.1\|671885_672143_+	putative phage gene	A5X9I7	Aeromonas_virus	4.7e-21	63.4
SQH43350.1\|672330_674301_+\|tail	Phage-related tail protein	F1BUK9	Cronobacter_phage	9.5e-271	69.9
SQH43351.1\|674297_674627_+	phage protein	F1BUK8	Cronobacter_phage	8.4e-39	71.4
SQH43352.1\|674623_675808_+\|plate	Phage baseplate	F1BUK6	Cronobacter_phage	6.7e-179	78.4
SQH43353.1\|675800_676388_+\|tail	Bacteriophage P2-related tail formation protein	F1BUK5	Cronobacter_phage	6.4e-90	82.1
SQH43354.1\|676397_678632_+	gp19	A0A192Y7M1	Salmonella_phage	3.1e-169	72.8
SQH43355.1\|678644_679199_+	gp20	S4TUB9	Salmonella_phage	5.3e-94	93.4
SQH43356.1\|679188_679914_+	phage protein	F1BUK1	Cronobacter_phage	6.6e-68	56.4
SQH43357.1\|679885_680431_+	phage protein	F1BUJ9	Cronobacter_phage	1.5e-64	73.1
SQH43358.1\|680430_682134_+	phage protein	F1BUJ7	Cronobacter_phage	4.4e-224	81.4
SQH43359.1\|682752_683067_+	Uncharacterised protein	S6B1N1	Thermus_phage	2.9e-12	39.4
SQH43360.1\|683515_684022_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
SQH43361.1\|684144_686127_-	RNA polymerase sigma-70 factor	A0A2I7SAT0	Vibrio_phage	9.0e-35	33.7

DBSCAN-SWA_2

1155242 : 1165040

Enterobacteria_phage(87.5%)

capsid,integrase

attL 1160913:1160928|attR 1167655:1167670

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH43805.1\|1155242_1157576_-	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.5
SQH43806.1\|1157590_1157911_-	putative prophage protein	NA	NA	NA	NA
SQH43807.1\|1157907_1158168_-	bacteriophage protein	NA	NA	NA	NA
SQH43808.1\|1158241_1158691_-	Uncharacterised protein	Q7M298	Enterobacteria_phage	1.5e-43	70.5
SQH43809.1\|1158683_1158983_-	prophage derepression protein	Q7M2A0	Enterobacteria_phage	6.1e-28	70.7
SQH43810.1\|1159571_1159838_-	prophage regulatory protein	Q7M299	Enterobacteria_phage	1.1e-33	78.4
SQH43811.1\|1160385_1161123_+\|capsid	bacteriophage capsid protein	Q7M2A2	Enterobacteria_phage	1.7e-76	62.3
1160913:1160928	attL	NA	NA	NA	NA
SQH43812.1\|1161119_1161365_+	phage transcriptional activator, Ogr/delta	Q7M294	Enterobacteria_phage	5.3e-30	75.3
SQH43813.1\|1161381_1161948_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.0e-55	62.7
SQH43814.1\|1162295_1163153_+	Uncharacterised protein	NA	NA	NA	NA
SQH43815.1\|1163152_1163812_+	Uncharacterised protein	NA	NA	NA	NA
SQH43816.1\|1163846_1165040_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	4.1e-107	49.1
1167655:1167670	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1226684 : 1275469

Salmonella_phage(83.33%)

holin,tRNA,protease,integrase,head,tail,lysis,terminase

attL 1231159:1231173|attR 1245519:1245533

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH43859.1\|1226684_1227422_+\|tRNA	tRNA (adenine-N(6)-)-methyltransferase	NA	NA	NA	NA
SQH43860.1\|1227406_1229029_-	L-aspartate oxidase	NA	NA	NA	NA
SQH43861.1\|1229453_1230029_+	RNA polymerase sigma-E factor (sigma-24)	NA	NA	NA	NA
SQH43862.1\|1230060_1230711_+	anti-RNA polymerase sigma factor SigE	NA	NA	NA	NA
SQH43863.1\|1230710_1231667_+	anti-sigma E factor	NA	NA	NA	NA
1231159:1231173	attL	NA	NA	NA	NA
SQH43864.1\|1231663_1232143_+	SoxR reducing system protein RseC	NA	NA	NA	NA
SQH43865.1\|1232640_1233870_+\|integrase	integrase	H6WRW7	Salmonella_phage	4.9e-233	94.1
SQH43866.1\|1233847_1234132_-	excisionase-like protein	H6WRW8	Salmonella_phage	3.1e-42	86.2
SQH43867.1\|1234172_1234415_-	putative bacteriophage protein	S4TR31	Salmonella_phage	3.7e-36	94.9
SQH43868.1\|1234417_1235314_-	putative DNA methylase	A0A0M4R347	Salmonella_phage	9.3e-157	95.8
SQH43869.1\|1235310_1235934_-	putative phage-type endonuclease	S0A2A9	Cellulophaga_phage	1.3e-45	48.6
SQH43870.1\|1235930_1236434_-	Uncharacterised protein	A0A0F7L7F5	uncultured_marine_virus	1.1e-13	31.5
SQH43871.1\|1236439_1236736_-	Host-nuclease inhibitor protein Gam	A0A0M5M5Z9	Salmonella_phage	1.1e-48	100.0
SQH43872.1\|1236826_1237027_-	FtsZ inhibitor protein	G8C7T2	Escherichia_phage	2.4e-12	48.4
SQH43873.1\|1237019_1237244_-	Uncharacterised protein	NA	NA	NA	NA
SQH43874.1\|1237431_1237866_-	regulatory protein	H6WRX4	Salmonella_phage	2.5e-14	38.2
SQH43875.1\|1238233_1238554_+	repressor	A0A0M4RU01	Salmonella_phage	1.3e-52	100.0
SQH43876.1\|1238644_1239622_+	regulatory protein	H6WRX7	Salmonella_phage	1.6e-157	97.0
SQH43877.1\|1239624_1240374_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	4.3e-139	100.0
SQH43878.1\|1240384_1240693_+	DNA-binding protein	H6WRX9	Salmonella_phage	1.4e-48	96.9
SQH43879.1\|1240670_1240856_+	bacteriophage protein	S4TNP2	Salmonella_phage	8.1e-07	57.4
SQH43880.1\|1240954_1241224_+	putative prophage protein	NA	NA	NA	NA
SQH43881.1\|1241546_1241780_+	Gifsy-1 prophage DinI	H6WRY5	Salmonella_phage	5.6e-37	100.0
SQH43882.1\|1242194_1242797_+	bacteriophage protein	S4TTI0	Salmonella_phage	2.2e-109	99.0
SQH43883.1\|1242796_1243003_+	Phage protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
SQH43884.1\|1243005_1243617_+	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	3.6e-91	98.5
SQH43885.1\|1243613_1243754_+	DNA breaking-rejoining protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
SQH43886.1\|1243750_1244440_+	antiterminator-like protein	I6PDF8	Cronobacter_phage	1.1e-59	50.6
SQH43887.1\|1244634_1244982_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.8e-46	80.4
SQH43888.1\|1244984_1245611_+	Phage endolysin	Q858F0	Salmonella_phage	7.1e-95	80.7
1245519:1245533	attR	NA	NA	NA	NA
SQH43889.1\|1245607_1246087_+\|lysis	bacteriophage lysis protein	A0A0M4RD57	Salmonella_phage	7.6e-57	80.5
SQH43890.1\|1246593_1247223_+\|terminase	putative prophage terminase small subunit	A0A0M3ULJ9	Salmonella_phage	2.1e-110	99.5
SQH43891.1\|1247225_1248848_+	gp33 TerL	A0A0M5M1R6	Salmonella_phage	0.0e+00	99.6
SQH43892.1\|1248844_1250317_+	Phage-associated protein	A0A0M4S6U1	Salmonella_phage	5.8e-281	99.4
SQH43893.1\|1250330_1250939_+	putative bacteriophage protein	A0A0M4REK0	Salmonella_phage	6.4e-101	88.1
SQH43894.1\|1250953_1252186_+\|head,protease	head protein/prohead protease	A0A0M4R5A6	Salmonella_phage	1.6e-228	99.5
SQH43895.1\|1252190_1252688_+	bacteriophage protein	A0A0M4QWZ6	Salmonella_phage	8.7e-88	99.4
SQH43896.1\|1252699_1253641_+	bacteriophage protein	A0A0M3ULD3	Salmonella_phage	3.5e-178	99.4
SQH43897.1\|1253682_1254051_+	bacteriophage protein	A0A0M4RTX5	Salmonella_phage	5.7e-60	98.4
SQH43898.1\|1254016_1254424_+	bacteriophage protein	A0A0M5M3S2	Salmonella_phage	3.0e-70	95.6
SQH43899.1\|1254420_1254975_+	bacteriophage protein	A0A0M4S631	Salmonella_phage	1.8e-94	99.5
SQH43900.1\|1254961_1255351_+	bacteriophage protein	A0A0M3ULK0	Salmonella_phage	6.0e-68	98.4
SQH43901.1\|1255340_1255889_+	bacteriophage protein	A0A0M4R331	Salmonella_phage	3.3e-80	75.8
SQH43902.1\|1255892_1257038_+	bacteriophage protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.0e-163	74.8
SQH43903.1\|1257050_1257494_+	bacteriophage protein	A0A2H4J619	uncultured_Caudovirales_phage	6.0e-56	74.5
SQH43904.1\|1257497_1257950_+	bacteriophage protein	A0A0M4S6U8	Salmonella_phage	3.2e-65	81.3
SQH43905.1\|1258127_1260137_+	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	0.0e+00	98.7
SQH43906.1\|1260136_1260712_+	bacteriophage protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
SQH43907.1\|1260711_1261014_+	bacteriophage protein	A0A0M4R5B7	Salmonella_phage	4.2e-53	100.0
SQH43908.1\|1261016_1262090_+	bacteriophage protein	A0A0M4QX01	Salmonella_phage	1.6e-187	96.9
SQH43909.1\|1262086_1262419_+	putative secreted protein	A0A0M4RTY3	Salmonella_phage	1.7e-23	69.1
SQH43910.1\|1262507_1263260_+	putative bacteriophage protein	NA	NA	NA	NA
SQH43911.1\|1263261_1263672_+	putative bacteriophage protein	NA	NA	NA	NA
SQH43912.1\|1263732_1264485_+	bacteriophage protein	A0A0M5M1K7	Salmonella_phage	8.0e-93	70.9
SQH43913.1\|1264484_1264838_+	bacteriophage protein	A0A0M4R339	Salmonella_phage	2.7e-59	95.7
SQH43914.1\|1264838_1266038_+	bacteriophage protein	A0A0M4RD32	Salmonella_phage	4.8e-217	98.7
SQH43915.1\|1266034_1266715_+	bacteriophage protein	A0A0M5M1K4	Salmonella_phage	6.2e-129	99.1
SQH43916.1\|1266714_1268358_+\|tail	Long tail fiber protein p37 Protein Gp37; Receptor-recognizing protein	A0A1B0VFW4	Salmonella_phage	4.2e-147	66.0
SQH43917.1\|1268372_1268891_+\|tail	bacteriophage tail protein	A0A0U2QV64	Escherichia_phage	4.3e-45	52.0
SQH43918.1\|1269061_1269703_-	glutathione S-transferase	NA	NA	NA	NA
SQH43919.1\|1269976_1270210_-	Uncharacterised protein	A0A192Y6D5	Salmonella_phage	1.2e-36	100.0
SQH43920.1\|1270445_1270859_-	Uncharacterised protein	A0A192Y6F0	Salmonella_phage	1.1e-72	99.3
SQH43921.1\|1270855_1271068_-	Uncharacterised protein	A0A192Y5V6	Salmonella_phage	2.7e-30	100.0
SQH43922.1\|1271816_1272824_-	phage protein	Q8HAB2	Salmonella_phage	4.7e-181	90.1
SQH43923.1\|1273669_1275469_+	GTP-binding protein LepA	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9

DBSCAN-SWA_4

1657147 : 1670898

Salmonella_phage(38.46%)

protease,holin,tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH44255.1\|1657147_1657939_+\|tail	side tail fiber protein	Q1MVL8	Enterobacteria_phage	2.2e-48	31.4
SQH44256.1\|1658607_1660974_+	E3 ubiquitin-protein ligase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
SQH44257.1\|1660973_1661075_+	Uncharacterised protein	NA	NA	NA	NA
SQH44258.1\|1661064_1661295_+	DNA-binding protein	Q8HA92	Salmonella_phage	5.0e-38	100.0
SQH44259.1\|1661302_1662292_+	putative cytoplasmic protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
SQH44260.1\|1662309_1662675_+	phage antiterminator	A5LH77	Enterobacteria_phage	7.4e-52	81.7
SQH44261.1\|1662703_1664035_-	NTPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
SQH44262.1\|1664331_1664661_+\|holin	holin	Q8SBE1	Shigella_phage	3.9e-36	94.6
SQH44263.1\|1664674_1665193_+\|head,protease	phage pro-head protease	Q8SBH9	Shigella_phage	2.6e-74	87.3
SQH44264.1\|1665253_1666495_+	bacteriophage protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
SQH44265.1\|1666497_1667025_+\|tail	tail protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
SQH44266.1\|1667402_1667846_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
SQH44267.1\|1667899_1669729_-	acetylase	C6ZR20	Salmonella_phage	3.0e-61	29.6
SQH44268.1\|1670226_1670898_+	DNA polymerase V subunit	Q1MVE7	Enterobacteria_phage	1.3e-49	71.3

DBSCAN-SWA_5

1742946 : 1752117

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH44333.1\|1742946_1743894_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	6.2e-10	27.4
SQH44334.1\|1743877_1744609_+	putative permease transmembrane component	NA	NA	NA	NA
SQH44335.1\|1744589_1744697_-	membrane protein	NA	NA	NA	NA
SQH44336.1\|1744756_1745488_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
SQH44337.1\|1745710_1747396_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
SQH44338.1\|1747392_1748112_+	two-component system response regulator	NA	NA	NA	NA
SQH44339.1\|1748158_1748626_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
SQH44340.1\|1748682_1749213_-	lipoprotein	NA	NA	NA	NA
SQH44341.1\|1749384_1749843_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
SQH44342.1\|1750083_1752117_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_6

1819496 : 1830002

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH44396.1\|1819496_1820900_+	Colanic acid biosynthesis protein wcaM	A0A291LBB9	Klebsiella_phage	4.0e-21	27.2
SQH44397.1\|1821077_1821971_+	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
SQH44398.1\|1822347_1823433_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
SQH44399.1\|1823432_1824332_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
SQH44400.1\|1824379_1825258_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.1e-108	65.5
SQH44401.1\|1825261_1825810_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.0
SQH44402.1\|1825815_1826808_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
SQH44403.1\|1826804_1827578_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
SQH44404.1\|1827582_1828662_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
SQH44405.1\|1828688_1830002_+	lipopolysaccharide biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_7

2029529 : 2086991

Bacillus_virus(12.5%)

transposase,tRNA,protease,integrase,terminase

attL 2041876:2041890|attR 2060210:2060224

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH44603.1\|2029529_2031302_+\|tRNA	aspartyl-tRNA synthetase	NA	NA	NA	NA
SQH44604.1\|2031395_2031848_+	dATP pyrophosphohydrolase	NA	NA	NA	NA
SQH44605.1\|2031877_2032618_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA
SQH44606.1\|2032654_2033176_+	crossover junction endodeoxyribonuclease	G3MA90	Bacillus_virus	2.6e-10	35.1
SQH44607.1\|2033177_2033777_-	protein yebB	NA	NA	NA	NA
SQH44608.1\|2033985_2034678_+	membrane protein	NA	NA	NA	NA
SQH44609.1\|2035037_2035649_+	Holliday junction ATP-dependent DNA helicase ruvA	NA	NA	NA	NA
SQH44610.1\|2035657_2036668_+	Holliday junction DNA helicase	A0A127AWE7	Bacillus_phage	2.4e-07	25.9
SQH44611.1\|2036746_2037532_-	high-affinity zinc uptake system membrane protein	NA	NA	NA	NA
SQH44612.1\|2037528_2038284_-	high-affinity zinc transporter ATPase	G3M9Y6	Bacillus_virus	8.5e-18	29.4
SQH44613.1\|2038305_2039307_+	high-affinity zinc transporter periplasmic protein	NA	NA	NA	NA
SQH44614.1\|2039322_2040642_+	Cell wall endopeptidase family M23/M37	A8ATH6	Listeria_phage	2.6e-14	40.9
SQH44615.1\|2040758_2041730_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA
SQH44616.1\|2041802_2043245_-	pyruvate kinase A	NA	NA	NA	NA
2041876:2041890	attL	NA	NA	NA	NA
SQH44617.1\|2043368_2044238_-	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
SQH44618.1\|2044579_2046055_+	glucose 6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
SQH44619.1\|2046289_2048101_+	6-phosphogluconate dehydratase	NA	NA	NA	NA
SQH44620.1\|2048138_2048780_+	KHG/KDPG aldolase	NA	NA	NA	NA
SQH44621.1\|2048879_2050058_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
SQH44622.1\|2050188_2050479_+	DNA damage-inducible gene in SOS regulon-dependent on cyclic AMP and H-NS	NA	NA	NA	NA
SQH44623.1\|2050546_2050900_+	protein YebF	NA	NA	NA	NA
SQH44624.1\|2050993_2051653_+	inner membrane protein YebE	NA	NA	NA	NA
SQH44625.1\|2051866_2053918_+	oligopeptidase	NA	NA	NA	NA
SQH44626.1\|2053954_2054653_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.8e-07	40.4
SQH44627.1\|2054676_2055333_-	Putative amido hydrolase	NA	NA	NA	NA
SQH44628.1\|2055440_2055671_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
SQH44629.1\|2055808_2056183_+	Copper resistance protein CopC	NA	NA	NA	NA
SQH44630.1\|2056183_2057059_+	membrane protein	NA	NA	NA	NA
SQH44631.1\|2057075_2057429_+	Protein of uncharacterised function (DUF2511)	NA	NA	NA	NA
SQH44632.1\|2057811_2058891_-\|integrase	phage integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	9.7e-100	52.0
SQH44633.1\|2058887_2059994_-	exonuclease VIII	Q9QF34	Lambdoid_phage	1.1e-55	66.7
SQH44634.1\|2060024_2060255_+	lytic enzyme	Q8HA86	Salmonella_phage	6.1e-28	93.7
2060210:2060224	attR	NA	NA	NA	NA
SQH44635.1\|2060308_2060842_+	exported phage protein	A0A291LBG9	Klebsiella_phage	5.4e-11	43.0
SQH44636.1\|2061098_2061266_-	lytic enzyme	NA	NA	NA	NA
SQH44637.1\|2061573_2062065_+\|terminase	terminase	Q9EYD0	Enterobacteria_phage	4.9e-43	57.5
SQH44638.1\|2062051_2062231_+\|terminase	phage terminase large subunit	NA	NA	NA	NA
SQH44639.1\|2065481_2065640_-	Uncharacterised protein	NA	NA	NA	NA
SQH44640.1\|2065697_2066063_+	phage encoded protein PagM	NA	NA	NA	NA
SQH44641.1\|2066244_2066367_+	Uncharacterised protein	NA	NA	NA	NA
SQH44642.1\|2066815_2067430_-	disulfide bond formation protein	NA	NA	NA	NA
SQH44643.1\|2067439_2067598_-	membrane protein	NA	NA	NA	NA
SQH44644.1\|2067730_2068645_-	drug/metabolite transporter DMT permease	NA	NA	NA	NA
SQH44645.1\|2069775_2070069_+	Uncharacterised protein	NA	NA	NA	NA
SQH44646.1\|2070432_2071290_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	3.5e-20	28.2
SQH44647.1\|2071289_2071436_+\|transposase	transposase	NA	NA	NA	NA
SQH44648.1\|2072717_2073137_+	acetyltransferase	NA	NA	NA	NA
SQH44649.1\|2073509_2073986_-	Uncharacterised protein	NA	NA	NA	NA
SQH44650.1\|2074313_2074709_-	protein ycgX	C6ZCX4	Enterobacteria_phage	1.6e-15	33.1
SQH44651.1\|2075391_2076114_+	guanine nucleotide exchange factor SopE	NA	NA	NA	NA
SQH44652.1\|2076398_2076563_+	membrane protein	NA	NA	NA	NA
SQH44653.1\|2076535_2076769_+	Uncharacterised protein	NA	NA	NA	NA
SQH44654.1\|2076786_2077437_+	Serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.1e-58	51.4
SQH44655.1\|2077455_2077647_-	putative secreted protein	NA	NA	NA	NA
SQH44656.1\|2077757_2077997_-	conserved domain protein	NA	NA	NA	NA
SQH44657.1\|2078110_2079652_-	rRNA (cytosine-C(5)-)-methyltransferase RsmF	NA	NA	NA	NA
SQH44658.1\|2079627_2082261_-	mce-related protein	NA	NA	NA	NA
SQH44659.1\|2082229_2083513_-	Paraquat-inducible protein A	NA	NA	NA	NA
SQH44660.1\|2083569_2084139_+	GAF domain-containing protein	NA	NA	NA	NA
SQH44661.1\|2084236_2084923_+	ProP effector	NA	NA	NA	NA
SQH44662.1\|2084942_2086991_+\|protease	Tail-specific protease precursor	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5

DBSCAN-SWA_8

2713591 : 2761298

Enterobacteria_phage(40.48%)

transposase,tRNA,portal,head,tail,lysis,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH45268.1\|2713591_2713747_+\|tail	tail fiber assembly protein	E5G6P4	Salmonella_phage	2.2e-05	75.0
SQH45269.1\|2714404_2714893_+\|transposase	transposase-like protein	NA	NA	NA	NA
SQH45270.1\|2715007_2715193_+\|transposase	transposase	NA	NA	NA	NA
SQH45271.1\|2716377_2716896_-\|tail	bacteriophage tail protein	A0A0U2QV64	Escherichia_phage	2.5e-45	51.4
SQH45272.1\|2719642_2719885_-	Uncharacterised protein	NA	NA	NA	NA
SQH45273.1\|2719923_2723286_-\|tail	Phage tail fiber protein	K7PKJ2	Enterobacteria_phage	0.0e+00	80.0
SQH45274.1\|2723348_2723855_-\|tail	tail protein	A5LH42	Enterobacteria_phage	3.2e-69	79.2
SQH45275.1\|2723893_2724631_-	Tail fiber component K	K7PLW1	Enterobacteria_phage	1.2e-128	84.6
SQH45276.1\|2724637_2725336_-\|tail	Minor tail protein L	A0A1B5FP81	Escherichia_phage	6.0e-103	75.9
SQH45277.1\|2725345_2725675_-\|tail	tail protein	A5LH39	Enterobacteria_phage	2.1e-42	70.4
SQH45278.1\|2725677_2728719_-\|tail	tail protein	A0A291AWX1	Escherichia_phage	1.7e-287	64.1
SQH45279.1\|2728690_2729005_-\|tail	minor tail-like protein	A5LH37	Enterobacteria_phage	8.0e-31	64.2
SQH45280.1\|2729025_2729421_-\|tail	minor tail protein	A5LH36	Enterobacteria_phage	2.3e-30	56.5
SQH45281.1\|2729471_2730212_-\|tail	putative tail component of prophage	A0A291AWU6	Escherichia_phage	2.8e-98	76.9
SQH45282.1\|2730222_2730624_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	1.5e-50	98.0
SQH45283.1\|2730620_2731199_-	Gifsy-1 prophagei VmtZ	A5LH33	Enterobacteria_phage	1.1e-81	79.7
SQH45284.1\|2731185_2731563_-\|tail	tail attachment protein	K7PHD8	Enterobacteria_phage	3.4e-28	54.7
SQH45285.1\|2731573_2731933_-	DNA packaging protein	NA	NA	NA	NA
SQH45286.1\|2731990_2733019_-\|head	head protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
SQH45287.1\|2733073_2733421_-	Head decoration protein	A0A2R9YJN3	Escherichia_phage	4.1e-20	53.8
SQH45288.1\|2733433_2734930_-	scaffold protein	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
SQH45289.1\|2734919_2736539_-\|portal	phage portal protein, lambda family	K7P6U7	Enterobacteria_phage	9.8e-189	62.8
SQH45290.1\|2736496_2736700_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
SQH45291.1\|2736683_2738615_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
SQH45292.1\|2738586_2739132_-\|terminase	terminase	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
SQH45293.1\|2739417_2739819_+	Inhibitor of g-type lysozyme	NA	NA	NA	NA
SQH45294.1\|2740045_2740516_-\|lysis	bacteriophage lysis protein	A0A0M4RD57	Salmonella_phage	1.2e-54	81.8
SQH45295.1\|2740512_2741052_-	Phage endolysin R	S5MQK2	Escherichia_phage	4.4e-77	72.0
SQH45296.1\|2741029_2741248_-	Lysis protein S	H9C183	Pectobacterium_phage	5.6e-07	46.4
SQH45297.1\|2741881_2742436_-	putative bacteriophage protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-54	91.4
SQH45298.1\|2742706_2743261_-	putative bacteriophage protein	A0A0U2S606	Escherichia_phage	1.7e-63	64.8
SQH45299.1\|2743257_2743554_-	Protein of uncharacterised function (DUF1364)	K7P7Q1	Enterobacteria_phage	3.0e-35	79.1
SQH45300.1\|2743535_2743730_-	Phage protein	S4TNP0	Salmonella_phage	6.1e-13	61.5
SQH45301.1\|2743726_2744326_-	IrsA	A0A0U2RT94	Escherichia_phage	1.5e-94	81.9
SQH45302.1\|2744389_2744692_-	putative bacteriophage cohesive ends	NA	NA	NA	NA
SQH45303.1\|2745172_2745679_-	Uncharacterised protein	NA	NA	NA	NA
SQH45304.1\|2745981_2746359_-	DNA-binding protein	A0A088CBK9	Shigella_phage	5.1e-16	36.8
SQH45305.1\|2746371_2746833_-	Replication protein 14	A0A0U2JGJ0	Escherichia_phage	1.0e-66	74.8
SQH45306.1\|2746825_2747833_-	replication protein	A0A0U2RT81	Escherichia_phage	1.5e-123	67.5
SQH45307.1\|2747879_2748374_-	Protein of uncharacterised function (DUF1019)	NA	NA	NA	NA
SQH45308.1\|2748360_2748615_-	CRO	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
SQH45309.1\|2748711_2749137_+	transcriptional regulator	K7PH71	Enterobacterial_phage	9.3e-14	56.3
SQH45310.1\|2749446_2749635_+	Uncharacterised protein	NA	NA	NA	NA
SQH45311.1\|2749579_2749759_-	Uncharacterised protein	NA	NA	NA	NA
SQH45312.1\|2750189_2750474_+	DNA breaking-rejoining protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
SQH45313.1\|2750548_2750884_+	Uncharacterised protein	NA	NA	NA	NA
SQH45314.1\|2751024_2753715_+	exonuclease VIII	Q9QF34	Lambdoid_phage	1.1e-115	75.3
SQH45315.1\|2753707_2754412_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	1.3e-89	75.5
SQH45316.1\|2754574_2754895_+	Uncharacterised protein	A0A222YY67	Escherichia_phage	3.6e-34	60.2
SQH45317.1\|2754887_2755220_+	bacteriophage protein	S4TNP2	Salmonella_phage	3.1e-09	60.6
SQH45318.1\|2755216_2755720_+	Eaa protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
SQH45319.1\|2755769_2756006_+	excisionase	NA	NA	NA	NA
SQH45320.1\|2755995_2757138_+	Integrase	O21929	Phage_21	1.8e-173	80.0
SQH45321.1\|2757251_2758502_-	isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
SQH45322.1\|2758601_2759339_+	putative ribosomal large subunit pseudouridine synthase	NA	NA	NA	NA
SQH45323.1\|2759335_2759665_+	putative secreted protein	NA	NA	NA	NA
SQH45324.1\|2759676_2760138_+	mutT family protein	NA	NA	NA	NA
SQH45325.1\|2760191_2761298_+\|tRNA	tRNA-specific 2-thiouridylase MnmA	NA	NA	NA	NA

DBSCAN-SWA_9

2935571 : 2963078

Salmonella_phage(76.67%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH45496.1\|2935571_2938184_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.2e-20	22.8
SQH45497.1\|2938547_2938802_+	Gifsy-2 prophage MsgA	S4TNM0	Salmonella_phage	1.0e-36	95.2
SQH45498.1\|2939072_2939759_+	gifsy-2 prophage protein	NA	NA	NA	NA
SQH45499.1\|2940118_2940460_+	Uncharacterised ACR, COG2135	A0A2H4J5W2	uncultured_Caudovirales_phage	3.6e-16	65.6
SQH45500.1\|2940591_2940840_-\|transposase	transposase (remnant)	A0A0P0ZBS5	Stx2-converting_phage	4.0e-25	66.7
SQH45501.1\|2941107_2942076_-	Fis family transcriptional regulator	Q9MBL9	Phage_Gifsy-2	1.6e-191	98.4
SQH45502.1\|2942170_2942554_+\|tail	phage tail-fiber asembly protein	A0A1B0VCD0	Salmonella_phage	5.1e-19	63.4
SQH45503.1\|2943196_2943715_-\|tail	bacteriophage tail protein	A0A0U2QV64	Escherichia_phage	2.5e-45	51.4
SQH45504.1\|2943729_2945370_-\|tail	Long tail fiber protein p37 Protein Gp37; Receptor-recognizing protein	A0A1B0VFW4	Salmonella_phage	6.1e-146	65.5
SQH45505.1\|2945369_2946050_-	bacteriophage protein	A0A0M5M1K4	Salmonella_phage	6.2e-129	99.1
SQH45506.1\|2946046_2947246_-	bacteriophage protein	A0A0M4RD32	Salmonella_phage	7.0e-216	98.2
SQH45507.1\|2947246_2947600_-	bacteriophage protein	A0A0M4R339	Salmonella_phage	2.1e-59	97.4
SQH45508.1\|2947599_2948352_-	bacteriophage protein	A0A0M5M1K7	Salmonella_phage	2.7e-93	71.3
SQH45509.1\|2948415_2949141_-	Uncharacterised protein	NA	NA	NA	NA
SQH45510.1\|2949143_2950208_-	putative bacteriophage protein	A0A0M4QX01	Salmonella_phage	8.8e-162	85.9
SQH45511.1\|2950210_2950513_-	bacteriophage protein	A0A0M4R5B7	Salmonella_phage	4.2e-53	100.0
SQH45512.1\|2950512_2951088_-	bacteriophage protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
SQH45513.1\|2951087_2952824_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	0.0e+00	99.7
SQH45514.1\|2952774_2952981_-	Uncharacterised protein	R9VWB9	Serratia_phage	5.1e-18	74.1
SQH45515.1\|2952977_2953235_-	phage protein	T1S9K2	Salmonella_phage	4.7e-37	90.6
SQH45516.1\|2953248_2953944_-	replication protein O of prophage CP-933X	G8C7U6	Escherichia_phage	4.5e-58	47.0
SQH45517.1\|2953940_2954867_-	phage replication protein O	A0A0M5M7Y1	Salmonella_phage	1.1e-123	77.1
SQH45518.1\|2954958_2955279_-	repressor	A0A0M4RU01	Salmonella_phage	1.3e-52	100.0
SQH45519.1\|2955298_2955535_-	phage regulatory protein	H6WRX5	Salmonella_phage	1.8e-38	100.0
SQH45520.1\|2955664_2956069_+	DNA-binding protein	H6WRX4	Salmonella_phage	4.2e-72	100.0
SQH45521.1\|2956356_2956473_+	Gifsy-1 prophage protein	NA	NA	NA	NA
SQH45522.1\|2956465_2956624_+	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
SQH45523.1\|2956708_2956996_+	Gifsy-1 prophage protein	H6WRX2	Salmonella_phage	3.0e-48	100.0
SQH45524.1\|2957122_2960050_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.1
SQH45525.1\|2960060_2961170_+	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	7.1e-207	100.0
SQH45526.1\|2961212_2961452_+	putative bacteriophage protein	S4TR31	Salmonella_phage	2.0e-37	100.0
SQH45527.1\|2961492_2961741_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
SQH45528.1\|2961785_2963078_+	Integrase	S4TSP2	Salmonella_phage	3.4e-253	100.0

DBSCAN-SWA_10

3393532 : 3401436

Salmonella_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH45909.1\|3393532_3394858_-	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-103	46.5
SQH45910.1\|3395073_3395928_+	AraC family transcriptional regulator	NA	NA	NA	NA
SQH45911.1\|3395978_3396413_-	cation efflux system protein CusA	NA	NA	NA	NA
SQH45912.1\|3397463_3397826_+	translocase	I1TED9	Salmonella_phage	1.1e-60	99.2
SQH45913.1\|3397822_3398749_+	bactoprenol glucosyl transferase	I1TED8	Salmonella_phage	4.9e-169	97.4
SQH45914.1\|3398741_3400382_+	putative inner membrane protein	B9UDL6	Salmonella_phage	8.7e-84	37.5
SQH45915.1\|3400438_3400597_-	Uncharacterised protein	A0A1W5PUZ7	Salmonella_phage	8.4e-13	67.3
SQH45916.1\|3400768_3400987_+\|transposase	transposase	U5P4I9	Shigella_phage	2.3e-16	76.7
SQH45917.1\|3401163_3401436_+\|transposase	transposase	U5P429	Shigella_phage	2.8e-32	86.8

DBSCAN-SWA_11

3452819 : 3511954

Bacillus_phage(25.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH45968.1\|3452819_3453737_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
SQH45969.1\|3453733_3454186_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
SQH45970.1\|3454186_3454603_-	copper efflux regulator	NA	NA	NA	NA
SQH45971.1\|3454712_3457214_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	1.5e-111	37.1
SQH45972.1\|3457367_3458195_+	Secreted protein	NA	NA	NA	NA
SQH45973.1\|3459276_3459756_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
SQH45974.1\|3459873_3461526_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
SQH45975.1\|3461698_3462919_+	fosmidomycin resistance protein	NA	NA	NA	NA
SQH45976.1\|3463133_3464810_+	transport protein	NA	NA	NA	NA
SQH45977.1\|3464858_3466208_-	inosine/guanosine kinase	NA	NA	NA	NA
SQH45978.1\|3466315_3467287_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	6.6e-15	27.4
SQH45979.1\|3467283_3468246_-	ferrochelatase	NA	NA	NA	NA
SQH45980.1\|3468474_3469119_-	adenylate kinase	NA	NA	NA	NA
SQH45981.1\|3469360_3471235_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	9.8e-116	36.9
SQH45982.1\|3471345_3471951_-	recombination protein RecR	NA	NA	NA	NA
SQH45983.1\|3471950_3472280_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
SQH45984.1\|3474367_3474919_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.0e-28	45.2
SQH45985.1\|3475071_3475449_-	Inner membrane protein YbaN	NA	NA	NA	NA
SQH45986.1\|3475529_3476045_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
SQH45987.1\|3476058_3476226_+	Putative inner membrane protein	NA	NA	NA	NA
SQH45988.1\|3476295_3477231_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	7.4e-64	52.1
SQH45989.1\|3477272_3480635_-	integral membrane protein AefA	NA	NA	NA	NA
SQH45990.1\|3480753_3481407_-	potential acrAB operon repressor	NA	NA	NA	NA
SQH45991.1\|3481548_3482742_+	acriflavin resistance protein A	NA	NA	NA	NA
SQH45992.1\|3482764_3485914_+	acriflavin resistance protein B	NA	NA	NA	NA
SQH45993.1\|3486409_3486784_+	Hha toxicity attenuator	NA	NA	NA	NA
SQH45994.1\|3486811_3487030_+	hemolysin expression modulating protein	NA	NA	NA	NA
SQH45995.1\|3487208_3487760_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQH45996.1\|3487877_3488348_+	Putative inner membrane protein	NA	NA	NA	NA
SQH45997.1\|3488549_3488810_-	50S ribosomal protein L31	NA	NA	NA	NA
SQH45998.1\|3489034_3490585_+	Uncharacterized protein ylaB	NA	NA	NA	NA
SQH45999.1\|3490893_3491205_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
SQH46000.1\|3491237_3491807_-	lipoprotein	NA	NA	NA	NA
SQH46001.1\|3492021_3492882_+	acyl-CoA thioesterase II	NA	NA	NA	NA
SQH46002.1\|3492981_3494268_-	ammonium transporter	NA	NA	NA	NA
SQH46003.1\|3494299_3494638_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
SQH46004.1\|3494850_3496632_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	4.1e-39	26.7
SQH46005.1\|3496624_3498397_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	1.8e-50	29.6
SQH46006.1\|3498437_3498896_-	transcriptional regulator	NA	NA	NA	NA
SQH46007.1\|3499008_3500064_+	lyase	NA	NA	NA	NA
SQH46008.1\|3500113_3500932_-	HMP-PP phosphatase	NA	NA	NA	NA
SQH46009.1\|3501032_3502733_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQH46010.1\|3502797_3503493_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.2e-87	68.4
SQH46011.1\|3503598_3503997_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
SQH46012.1\|3504100_3504475_-	competence protein ComEA	NA	NA	NA	NA
SQH46013.1\|3504624_3506496_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
SQH46014.1\|3506786_3507059_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.9e-20	58.4
SQH46015.1\|3507267_3509622_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	4.7e-224	52.3
SQH46016.1\|3509807_3511079_-\|protease	ATP-dependent clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.6e-131	56.5
SQH46017.1\|3511330_3511954_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9

DBSCAN-SWA_12

4546582 : 4609466

Salmonella_phage(41.46%)

plate,capsid,holin,tRNA,portal,integrase,head,tail,lysis

attL 4546375:4546421|attR 4577354:4577400

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4546375:4546421	attL	NA	NA	NA	NA
SQH46920.1\|4546582_4546999_+	Uncharacterised protein	S4TTB4	Salmonella_phage	1.8e-33	52.3
SQH46921.1\|4547033_4547252_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	4.7e-38	100.0
SQH46922.1\|4547329_4548499_-	phage late control gene D	S4TRX8	Salmonella_phage	1.4e-205	95.6
SQH46923.1\|4548495_4548978_-	gp25	S4TUC3	Salmonella_phage	1.3e-80	94.4
SQH46924.1\|4548992_4551434_-	gp24	A0A0M3UL85	Salmonella_phage	0.0e+00	93.1
SQH46925.1\|4551578_4551914_-\|tail	phage tail protein	A0A0M4S5P8	Salmonella_phage	1.8e-52	100.0
SQH46926.1\|4551976_4552495_-\|tail	major tail sheath protein FII	S4TNZ0	Salmonella_phage	1.4e-93	99.4
SQH46927.1\|4552510_4553698_-\|tail	bacteriophage major tail sheath protein FI	Q6K1H0	Salmonella_virus	2.0e-223	100.0
SQH46928.1\|4554401_4556144_-	gp19	A0A0M3ULF6	Salmonella_phage	1.3e-255	93.4
SQH46929.1\|4556154_4556685_-\|tail	orf38; p2 I-like tail protein	A0A0M4R4W9	Salmonella_phage	9.2e-104	99.4
SQH46930.1\|4556677_4557586_-\|plate	baseplate assembly protein	A0A1J0I2M3	Salmonella_phage	1.7e-158	98.7
SQH46931.1\|4557592_4557940_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	2.1e-56	98.3
SQH46932.1\|4557936_4558578_-\|plate	baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.4e-98	85.0
SQH46933.1\|4558654_4559998_-	Uncharacterised protein	NA	NA	NA	NA
SQH46934.1\|4560035_4560503_-	phage virion morphogenesis protein	O80313	Escherichia_phage	9.8e-49	67.8
SQH46935.1\|4560495_4560963_-\|tail	P2 phage tail completion protein R	U5N0S7	Enterobacteria_phage	2.2e-56	69.0
SQH46936.1\|4561070_4561484_-\|lysis	phage lysis regulatory protein	O80310	Escherichia_phage	8.4e-36	59.9
SQH46937.1\|4561480_4561990_-	glycoside hydrolase	A0A218M4K3	Erwinia_phage	4.6e-76	82.6
SQH46938.1\|4561973_4562195_-\|holin	prophage Hp1 family holin	A0A218M4L5	Erwinia_phage	8.7e-24	71.2
SQH46939.1\|4562185_4562389_-	phage Tail Protein X	U5N3E7	Enterobacteria_phage	8.9e-23	76.1
SQH46940.1\|4562388_4562889_-\|head	phage head completion protein	U5N0S3	Enterobacteria_phage	3.8e-59	68.5
SQH46941.1\|4562986_4563745_-	gpM	Q94MJ2	Enterobacteria_phage	2.7e-80	67.1
SQH46942.1\|4563748_4564909_-\|capsid	phage major capsid protein P2 family	A0A0M4R4W2	Salmonella_phage	2.8e-129	62.5
SQH46943.1\|4564940_4565804_-\|capsid	phage capsid scaffolding protein GpO	A0A218M4L9	Erwinia_phage	4.5e-100	64.8
SQH46944.1\|4565968_4567738_+	Terminase, ATPase subunit	Q9T0R3	Escherichia_phage	3.2e-286	81.0
SQH46945.1\|4567737_4568775_+\|portal	phage portal protein pbsx family	Q6K1J0	Salmonella_virus	7.7e-163	78.7
SQH46946.1\|4569177_4569279_-	Uncharacterised protein	A0A0M4RE72	Salmonella_phage	3.6e-09	87.9
SQH46947.1\|4569485_4569917_+	Uncharacterised protein	S4TUD6	Salmonella_phage	1.1e-75	100.0
SQH46948.1\|4570050_4571091_+	Fic protein family	S4TP71	Salmonella_phage	6.3e-197	100.0
SQH46949.1\|4571463_4573740_-	replication gene A protein	S4TTC1	Salmonella_phage	0.0e+00	88.0
SQH46950.1\|4573729_4574005_-	gp83	M1TAP2	Escherichia_phage	7.0e-31	72.5
SQH46951.1\|4574001_4574226_-	C4-type zinc finger protein, DksA/TraR family	A0A0F7LDG9	Escherichia_phage	2.0e-23	75.7
SQH46952.1\|4574357_4574528_-	11.3 kDa protein in GpA 5'region	Q7Y4C1	Escherichia_virus	2.8e-06	65.9
SQH46953.1\|4574527_4574752_-	8.3 kDa protein in GpA 5'region	Q7Y4C2	Escherichia_virus	3.4e-23	78.4
SQH46954.1\|4574815_4575316_-	Replication protein (GpB)	M1SV55	Escherichia_phage	1.8e-85	91.0
SQH46955.1\|4575485_4575758_-	Cox protein	Q1JS36	Enterobacteria_phage	1.0e-42	87.8
SQH46956.1\|4575894_4576188_+	phage repressor protein c	Q1JS45	Enterobacteria_phage	1.6e-36	75.3
SQH46957.1\|4576257_4577238_+\|integrase	Puataive integrase	S4TP66	Salmonella_phage	1.5e-179	96.0
SQH46958.1\|4577422_4577923_-	extracytoplasmic stress protein for protein-mediated toxicities	NA	NA	NA	NA
4577354:4577400	attR	NA	NA	NA	NA
SQH46959.1\|4578073_4578772_+	two-component response regulatory protein	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
SQH46960.1\|4578768_4580142_+	two-component sensor kinase protein	W8CYF6	Bacillus_phage	7.2e-15	25.6
SQH46961.1\|4580192_4580588_-	membrane protein	NA	NA	NA	NA
SQH46962.1\|4580599_4581289_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
SQH46963.1\|4581358_4581979_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9
SQH46964.1\|4582308_4583292_+	transport system periplasmic binding protein	NA	NA	NA	NA
SQH46965.1\|4583310_4583826_+	membrane transport protein	NA	NA	NA	NA
SQH46966.1\|4583818_4585126_+	integral membrane transport protein	NA	NA	NA	NA
SQH46967.1\|4585284_4585956_-	protein yiiY	NA	NA	NA	NA
SQH46968.1\|4586586_4587621_+	rhamnose-proton symporter	NA	NA	NA	NA
SQH46969.1\|4587617_4588466_-	transcriptional activator RhaR	NA	NA	NA	NA
SQH46970.1\|4588618_4589455_-	L-rhamnose operon regulatory protein	NA	NA	NA	NA
SQH46971.1\|4589742_4591212_+	rhamnulokinase	NA	NA	NA	NA
SQH46972.1\|4591208_4592468_+	L-rhamnose isomerase	NA	NA	NA	NA
SQH46973.1\|4592610_4593438_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
SQH46974.1\|4593564_4594713_+	Lactaldehyde reductase	NA	NA	NA	NA
SQH46975.1\|4594709_4595024_+	L-rhamnose mutarotase	NA	NA	NA	NA
SQH46976.1\|4595112_4595661_-	putative DNA-binding protein	NA	NA	NA	NA
SQH46977.1\|4595761_4596421_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SQH46978.1\|4596420_4596744_+	Inner membrane protein	NA	NA	NA	NA
SQH46979.1\|4597099_4598200_-	Uncharacterised protein	NA	NA	NA	NA
SQH46980.1\|4598382_4599414_+	membrane protein	NA	NA	NA	NA
SQH46981.1\|4599681_4600518_-	formate dehydrogenase accessory protein	NA	NA	NA	NA
SQH46982.1\|4603775_4604678_+	formate dehydrogenase-O subunit beta	NA	NA	NA	NA
SQH46983.1\|4604674_4605310_+	formate dehydrogenase-O gamma subunit	NA	NA	NA	NA
SQH46984.1\|4605306_4606236_+	FdhE protein	NA	NA	NA	NA
SQH46985.1\|4606282_4606573_-	Cro/Cl family transcriptional regulator	NA	NA	NA	NA
SQH46986.1\|4606573_4606885_-	Uncharacterised protein	NA	NA	NA	NA
SQH46987.1\|4607102_4608017_+	acetyl esterase	A0A2K9L5W3	Tupanvirus	3.1e-06	51.9
SQH46988.1\|4608042_4608984_-	acetyltransferase	NA	NA	NA	NA
SQH46989.1\|4609028_4609466_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483434

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection