CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483442	Streptococcus pyogenes strain NCTC8370 genome assembly, chromosome: 1	3 crisprs	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	0	10	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483442_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483442_1

562788-563082

TypeI

I-C

Consensus_repeat	Method
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	PILER-CR
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	CRISPRCasFinder
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	CRT

4 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of LS483442_1

>merge|LS483442|1|562788-563082|PILER-CR,CRISPRCasFinder,CRT
GTCTCACCCTTCATGGGTGAGTGGATTGAAATAAAAAGCATATCACGAAAATCACCAATTACATCAGGTCTCACCCTTCATGGGTGAGTGGATTGAAATAAGTCATTTTCTGCTTCTGCTAGGTTTGCTTTAGTCTCACCCTTCATGGGTGAGTGGATTGAAATTTTTTACTTTGATTACATCCCGCAATGTCACAGCGTCTCACCCTTCATGGGTGAGTGGATTGAAATTGTCCGCATACCTTGATTTGAGCGAGTAAACTCGTCTCACCCTTCATGGGTGAGTGGATTGAAAG

>LS483442|1|1|562788-563082|PILER-CR
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AAAAAGCATATCACGAAAATCACCAATTACATCAG
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AAGTCATTTTCTGCTTCTGCTAGGTTTGCTTTA
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	TTTTTACTTTGATTACATCCCGCAATGTCACAGC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	TGTCCGCATACCTTGATTTGAGCGAGTAAACTC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAG

>LS483442|1|1|562788-563082|CRISPRCasFinder
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AAAAAGCATATCACGAAAATCACCAATTACATCAG
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AAGTCATTTTCTGCTTCTGCTAGGTTTGCTTTA
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	TTTTTACTTTGATTACATCCCGCAATGTCACAGC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	TGTCCGCATACCTTGATTTGAGCGAGTAAACTC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAG

>LS483442|1|1|562788-563082|CRT
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AAAAAGCATATCACGAAAATCACCAATTACATCAG
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	AAGTCATTTTCTGCTTCTGCTAGGTTTGCTTTA
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	TTTTTACTTTGATTACATCCCGCAATGTCACAGC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	TGTCCGCATACCTTGATTTGAGCGAGTAAACTC
GTCTCACCCTTCATGGGTGAGTGGATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
LS483442.1\|SQH67885.1\|564630_565737_+\|bifunctional-methionine-sulfoxide-reductase-A/B	unknown	unknown	gnl\|CDD\|184456
LS483442.1\|SQH67881.1\|561309_562335_+\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483442.1\|SQH67887.1\|566561_568295_+\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483442.1\|SQH67886.1\|565824_566565_+\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483442.1\|SQH67873.1\|550256_550652_+\|hypothetical-cytosolic-protein	unknown	unknown	gnl\|CDD\|181104
LS483442.1\|SQH67879.1\|559788_560637_+\|putative-cytoplasmic-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
LS483442.1\|SQH67882.1\|562345_562639_+\|hypothetical-cytosolic-protein	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
LS483442.1\|SQH67878.1\|557888_559784_+\|CRISPR-associated-protein,-Csd1-family	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187773
LS483442.1\|SQH67880.1\|560638_561313_+\|RecB-family-exonuclease	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
LS483442.1\|SQH67883.1\|563241_563952_+\|cytochrome-c-type-biogenesis-protein	unknown	unknown	gnl\|CDD\|223856
LS483442.1\|SQH67889.1\|569460_570177_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483442.1\|SQH67874.1\|551252_551816_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|379082
LS483442.1\|SQH67890.1\|570342_570816_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
LS483442.1\|SQH67888.1\|568367_569447_+\|cytoplasmic-protein	unknown	unknown	gnl\|CDD\|225197
LS483442.1\|SQH67875.1\|551817_554466_+\|valyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235582
LS483442.1\|SQH67876.1\|554625_557028_+\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483442.1\|SQH67877.1\|557160_557889_+\|CRISPR-associated-protein-cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
LS483442.1\|SQH67892.1\|571911_573147_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
LS483442.1\|SQH67884.1\|563964_564588_+\|disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|239264
LS483442.1\|SQH67891.1\|570957_571638_+\|Fumarate-and-nitrate-reduction-regulatory-protein	unknown	unknown	gnl\|CDD\|223736

Protein	Function_ID	Function_description	E-value
LS483442.1\|SQH67885.1\|564630_565737_+\|bifunctional-methionine-sulfoxide-reductase-A/B	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	3.93012e-163
LS483442.1\|SQH67881.1\|561309_562335_+\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
LS483442.1\|SQH67887.1\|566561_568295_+\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.09335e-64
LS483442.1\|SQH67886.1\|565824_566565_+\|two-component-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	7.39476e-84
LS483442.1\|SQH67873.1\|550256_550652_+\|hypothetical-cytosolic-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000151325
LS483442.1\|SQH67879.1\|559788_560637_+\|putative-cytoplasmic-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	9.90819e-161
LS483442.1\|SQH67882.1\|562345_562639_+\|hypothetical-cytosolic-protein	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
LS483442.1\|SQH67878.1\|557888_559784_+\|CRISPR-associated-protein,-Csd1-family	gnl\|CDD\|187773	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-C subtype; also known as Csd1 family.	0
LS483442.1\|SQH67880.1\|560638_561313_+\|RecB-family-exonuclease	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.18604e-43
LS483442.1\|SQH67883.1\|563241_563952_+\|cytochrome-c-type-biogenesis-protein	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.97047e-42
LS483442.1\|SQH67889.1\|569460_570177_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	7.09856e-107
LS483442.1\|SQH67874.1\|551252_551816_+\|shikimate-kinase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00400512
LS483442.1\|SQH67890.1\|570342_570816_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.68589e-66
LS483442.1\|SQH67888.1\|568367_569447_+\|cytoplasmic-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	3.06295e-36
LS483442.1\|SQH67875.1\|551817_554466_+\|valyl-tRNA-synthetase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
LS483442.1\|SQH67876.1\|554625_557028_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.97197e-161
LS483442.1\|SQH67877.1\|557160_557889_+\|CRISPR-associated-protein-cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.32713e-117
LS483442.1\|SQH67892.1\|571911_573147_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
LS483442.1\|SQH67884.1\|563964_564588_+\|disulfide-interchange-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.89498e-35
LS483442.1\|SQH67891.1\|570957_571638_+\|Fumarate-and-nitrate-reduction-regulatory-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40

>LS483442.1|SQH67882.1|562345_562639_+|hypothetical-cytosolic-protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>LS483442.1|SQH67881.1|561309_562335_+|DNA-polymerase
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSSALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>LS483442.1|SQH67880.1|560638_561313_+|RecB-family-exonuclease
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>LS483442.1|SQH67879.1|559788_560637_+|putative-cytoplasmic-protein
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>LS483442.1|SQH67878.1|557888_559784_+|CRISPR-associated-protein,-Csd1-family
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQIQYDSFHKQLNNWIDYCEEGDVKKFLTFVQQFILKPEFLTLILDSLIGPDYQHNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMLKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>LS483442.1|SQH67877.1|557160_557889_+|CRISPR-associated-protein-cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>LS483442.1|SQH67876.1|554625_557028_+|CRISPR-associated-helicase-Cas3
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>LS483442.1|SQH67875.1|551817_554466_+|valyl-tRNA-synthetase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDDWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFNSNINYIKCFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>LS483442.1|SQH67874.1|551252_551816_+|shikimate-kinase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTQLTAAETAQLIIQKMTHIKEN
>LS483442.1|SQH67873.1|550256_550652_+|hypothetical-cytosolic-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKGSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK
>LS483442.1|SQH67883.1|563241_563952_+|cytochrome-c-type-biogenesis-protein
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LS483442.1|SQH67884.1|563964_564588_+|disulfide-interchange-protein
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LS483442.1|SQH67885.1|564630_565737_+|bifunctional-methionine-sulfoxide-reductase-A/B
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVAYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKEKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>LS483442.1|SQH67886.1|565824_566565_+|two-component-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>LS483442.1|SQH67887.1|566561_568295_+|two-component-sensor-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPILTPARQLSLSSKKEWVVSVTQEVVDRAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATVLVLRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>LS483442.1|SQH67888.1|568367_569447_+|cytoplasmic-protein
MSLATDYFSRQTPIVEKLMAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEATPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKAFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKKHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>LS483442.1|SQH67889.1|569460_570177_+|B3/4-domain-containing-protein
MVEFVADQSFWELFPGAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPAGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALKFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>LS483442.1|SQH67890.1|570342_570816_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>LS483442.1|SQH67891.1|570957_571638_+|Fumarate-and-nitrate-reduction-regulatory-protein
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>LS483442.1|SQH67892.1|571911_573147_+|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI

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Crispr_ID: LS483442_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483442_3

831478-831578

Orphan

Consensus_repeat	Method
TATAATTAGACTATACCAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483442_3

>merge|LS483442|3|831478-831578|CRISPRCasFinder
TATAATTAGACTATACCAATTTTATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGGTATAATTAGACTATACCAATTAT

>LS483442|3|3|831478-831578|CRISPRCasFinder
TATAATTAGACTATACCAATTTT	ATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGG
TATAATTAGACTATACCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
LS483442.1\|SQH68166.1\|821341_821530_+\|paratox	unknown	unknown	unknown
LS483442.1\|SQH68175.1\|831629_833444_+\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LS483442.1\|SQH68182.1\|839079_840402_-\|amino-acid-symporter	unknown	unknown	gnl\|CDD\|224040
LS483442.1\|SQH68173.1\|829176_830679_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LS483442.1\|SQH68181.1\|837724_838960_-\|cation-diffusion-facilitator-transporter-family-protein	unknown	unknown	gnl\|CDD\|223131
LS483442.1\|SQH68174.1\|830896_831454_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LS483442.1\|SQH68167.1\|822120_822735_+\|membrane-protein	unknown	unknown	gnl\|CDD\|223475
LS483442.1\|SQH68184.1\|843612_843861_+\|transglycosylase-associated-family-protein	unknown	unknown	gnl\|CDD\|225170
LS483442.1\|SQH68178.1\|834731_835361_+\|histidine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483442.1\|SQH68165.1\|820365_821121_-\|exotoxin-type-A	unknown	unknown	gnl\|CDD\|280949
LS483442.1\|SQH68168.1\|822861_823647_-\|ABC-transporter-permease-protein	unknown	unknown	unknown
LS483442.1\|SQH68179.1\|835376_836213_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483442.1\|SQH68183.1\|840930_843249_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
LS483442.1\|SQH68171.1\|824910_828021_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LS483442.1\|SQH68170.1\|824354_824726_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LS483442.1\|SQH68169.1\|823656_824355_-\|ABC-transporter-family-protein	unknown	unknown	gnl\|CDD\|224054
LS483442.1\|SQH68177.1\|834080_834722_+\|histidine-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LS483442.1\|SQH68180.1\|836582_837356_+\|protein-B	unknown	unknown	gnl\|CDD\|369335
LS483442.1\|SQH68176.1\|833639_833975_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|225380
LS483442.1\|SQH68172.1\|828100_829114_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111

Protein	Function_ID	Function_description	E-value
LS483442.1\|SQH68165.1\|820365_821121_-\|exotoxin-type-A	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	1.19518e-22
LS483442.1\|SQH68175.1\|831629_833444_+\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LS483442.1\|SQH68182.1\|839079_840402_-\|amino-acid-symporter	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LS483442.1\|SQH68173.1\|829176_830679_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LS483442.1\|SQH68181.1\|837724_838960_-\|cation-diffusion-facilitator-transporter-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.02963e-95
LS483442.1\|SQH68174.1\|830896_831454_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
LS483442.1\|SQH68167.1\|822120_822735_+\|membrane-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.46451e-31
LS483442.1\|SQH68184.1\|843612_843861_+\|transglycosylase-associated-family-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.81897e-13
LS483442.1\|SQH68178.1\|834731_835361_+\|histidine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.89978e-111
LS483442.1\|SQH68177.1\|834080_834722_+\|histidine-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
LS483442.1\|SQH68183.1\|840930_843249_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
LS483442.1\|SQH68171.1\|824910_828021_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LS483442.1\|SQH68170.1\|824354_824726_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.6897e-48
LS483442.1\|SQH68169.1\|823656_824355_-\|ABC-transporter-family-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
LS483442.1\|SQH68179.1\|835376_836213_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.19305e-109
LS483442.1\|SQH68180.1\|836582_837356_+\|protein-B	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	9.547e-99
LS483442.1\|SQH68176.1\|833639_833975_+\|phosphonoacetate-hydrolase	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
LS483442.1\|SQH68172.1\|828100_829114_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0

>LS483442.1|SQH68174.1|830896_831454_+|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LS483442.1|SQH68173.1|829176_830679_+|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LS483442.1|SQH68172.1|828100_829114_+|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKDGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LS483442.1|SQH68171.1|824910_828021_+|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEIEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYFCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTAFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDALTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDITAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSVTEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LS483442.1|SQH68170.1|824354_824726_-|GntR-family-transcriptional-regulator
MSWKFEEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LS483442.1|SQH68169.1|823656_824355_-|ABC-transporter-family-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LS483442.1|SQH68168.1|822861_823647_-|ABC-transporter-permease-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGWEGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LS483442.1|SQH68167.1|822120_822735_+|membrane-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIALFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LS483442.1|SQH68166.1|821341_821530_+|paratox
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPHEKVRDDEVVTVERVEEVMVELDYIK
>LS483442.1|SQH68165.1|820365_821121_-|exotoxin-type-A
MENNKKVLKKMVFFVLVTFLGLTISQEVFAQQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK
>LS483442.1|SQH68175.1|831629_833444_+|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKSLSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LS483442.1|SQH68176.1|833639_833975_+|phosphonoacetate-hydrolase
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LS483442.1|SQH68177.1|834080_834722_+|histidine-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LS483442.1|SQH68178.1|834731_835361_+|histidine-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LS483442.1|SQH68179.1|835376_836213_+|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGRCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQDKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LS483442.1|SQH68180.1|836582_837356_+|protein-B
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALKS
>LS483442.1|SQH68181.1|837724_838960_-|cation-diffusion-facilitator-transporter-family-protein
MTQDPIANLKLARKGPIVSIIVYLSLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQRTSIWRRHESWSLLFHQITPIAKKQLHHTHYRIVKM
>LS483442.1|SQH68182.1|839079_840402_-|amino-acid-symporter
MIALVKLIDNLVWGPPLLILLVGTGIYLTSHLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LS483442.1|SQH68183.1|840930_843249_+|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LS483442.1|SQH68184.1|843612_843861_+|transglycosylase-associated-family-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLSKTNN

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Crispr_ID: LS483442_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483442_4

1025810-1026241

TypeII

II-A

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	CRT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	PILER-CR

6 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LS483442_4

>merge|LS483442|4|1025810-1026241|CRISPRCasFinder,CRT,PILER-CR
GAATGGAGACCATTCAAAACAGCATAGCTCTAAAACGCCAAGCGCACCTAATTTTTCCTCGGCACTGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACAGAGCGCAATTAATTATTGCGGATATTCCTGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACTTAATATTGCGATGCGTCAGCCAACCACCCGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACTTTTTTACAAATTGAGTTATGTTCATATAAGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACAAAAAGCGCAAGAAGAAATCAACCAGCGCAGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACTCAAGAAAATAACCGAAACTATCAAAGTTGGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483442|4|4|1025810-1026241|CRISPRCasFinder
GAATGGAGACCATTCAAAACAGCATAGCTCTAAAAC	GCCAAGCGCACCTAATTTTTCCTCGGCACT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AGAGCGCAATTAATTATTGCGGATATTCCT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TTAATATTGCGATGCGTCAGCCAACCACCC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TTTTTTACAAATTGAGTTATGTTCATATAA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AAAAAGCGCAAGAAGAAATCAACCAGCGCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCAAGAAAATAACCGAAACTATCAAAGTTG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483442|4|2|1025810-1026241|CRT
GAATGGAGACCATTCAAAACAGCATAGCTCTAAAAC	GCCAAGCGCACCTAATTTTTCCTCGGCACT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AGAGCGCAATTAATTATTGCGGATATTCCT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TTAATATTGCGATGCGTCAGCCAACCACCC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TTTTTTACAAATTGAGTTATGTTCATATAA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AAAAAGCGCAAGAAGAAATCAACCAGCGCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCAAGAAAATAACCGAAACTATCAAAGTTG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483442|4|2|1025876-1026241|PILER-CR
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AGAGCGCAATTAATTATTGCGGATATTCCT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TTAATATTGCGATGCGTCAGCCAACCACCC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TTTTTTACAAATTGAGTTATGTTCATATAA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AAAAAGCGCAAGAAGAAATCAACCAGCGCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCAAGAAAATAACCGAAACTATCAAAGTTG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483442.1\|SQH68377.1\|1032788_1033421_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226884
LS483442.1\|SQH68379.1\|1034184_1034937_-\|oleoyl-[acyl-carrier-protein]-hydrolase	unknown	unknown	gnl\|CDD\|226401
LS483442.1\|SQH68372.1\|1025499_1025697_-\|nucleoside-diphosphate-kinase-protein-Ndk	unknown	unknown	gnl\|CDD\|179085
LS483442.1\|SQH68378.1\|1033420_1034185_-\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|319832
LS483442.1\|SQH68364.1\|1017650_1018478_-\|phospotransferase-system-(PTS),-enzyme-II-component-D	unknown	unknown	gnl\|CDD\|226239
LS483442.1\|SQH68367.1\|1019810_1020236_-\|PTS-system-mannose-specific-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
LS483442.1\|SQH68363.1\|1015865_1017515_-\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483442.1\|SQH68368.1\|1020442_1021462_-\|hypothetical-membrane-spanning-protein	unknown	unknown	gnl\|CDD\|225411
LS483442.1\|SQH68380.1\|1034946_1036143_-\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
LS483442.1\|SQH68373.1\|1026343_1027006_-\|CRISPR-associated-family-protein	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
LS483442.1\|SQH68365.1\|1018474_1019284_-\|PTS-system,-mannose-specific-IIC-component	unknown	unknown	gnl\|CDD\|226238
LS483442.1\|SQH68369.1\|1021576_1022014_-\|methionine-sulfoxide-reductase-B	unknown	unknown	gnl\|CDD\|234692
LS483442.1\|SQH68381.1\|1036139_1036781_-\|acetyltransferase-GNAT-Family	unknown	unknown	unknown
LS483442.1\|SQH68382.1\|1036914_1038270_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
LS483442.1\|SQH68366.1\|1019300_1019792_-\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
LS483442.1\|SQH68374.1\|1026995_1027307_-\|CRISPR-associated-Cas2-family-protein	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LS483442.1\|SQH68376.1\|1028202_1032309_-\|CRISPR-associated-protein,-Csn1-family	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LS483442.1\|SQH68370.1\|1022199_1023081_-\|LPXTG-motif-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|366278
LS483442.1\|SQH68375.1\|1027333_1028203_-\|cytoplasmic-protein	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LS483442.1\|SQH68371.1\|1023333_1025166_-\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462

Protein	Function_ID	Function_description	E-value
LS483442.1\|SQH68377.1\|1032788_1033421_-\|membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.42094e-87
LS483442.1\|SQH68379.1\|1034184_1034937_-\|oleoyl-[acyl-carrier-protein]-hydrolase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	6.71769e-110
LS483442.1\|SQH68372.1\|1025499_1025697_-\|nucleoside-diphosphate-kinase-protein-Ndk	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	2.17888e-07
LS483442.1\|SQH68378.1\|1033420_1034185_-\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.29438e-128
LS483442.1\|SQH68364.1\|1017650_1018478_-\|phospotransferase-system-(PTS),-enzyme-II-component-D	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
LS483442.1\|SQH68367.1\|1019810_1020236_-\|PTS-system-mannose-specific-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
LS483442.1\|SQH68363.1\|1015865_1017515_-\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.61115e-78
LS483442.1\|SQH68368.1\|1020442_1021462_-\|hypothetical-membrane-spanning-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	4.73129e-105
LS483442.1\|SQH68380.1\|1034946_1036143_-\|coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
LS483442.1\|SQH68373.1\|1026343_1027006_-\|CRISPR-associated-family-protein	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.48365e-121
LS483442.1\|SQH68365.1\|1018474_1019284_-\|PTS-system,-mannose-specific-IIC-component	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
LS483442.1\|SQH68369.1\|1021576_1022014_-\|methionine-sulfoxide-reductase-B	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.70819e-84
LS483442.1\|SQH68382.1\|1036914_1038270_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
LS483442.1\|SQH68366.1\|1019300_1019792_-\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.00329e-54
LS483442.1\|SQH68374.1\|1026995_1027307_-\|CRISPR-associated-Cas2-family-protein	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.09684e-53
LS483442.1\|SQH68376.1\|1028202_1032309_-\|CRISPR-associated-protein,-Csn1-family	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LS483442.1\|SQH68370.1\|1022199_1023081_-\|LPXTG-motif-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|366278	pfam00746, Gram_pos_anchor, LPXTG cell wall anchor motif.	9.44614e-08
LS483442.1\|SQH68375.1\|1027333_1028203_-\|cytoplasmic-protein	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.48912e-131
LS483442.1\|SQH68371.1\|1023333_1025166_-\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0

>LS483442.1|SQH68372.1|1025499_1025697_-|nucleoside-diphosphate-kinase-protein-Ndk
MEQTFFMIKPYGVKQGEVVGEVLRWIERLRFTFKRFELRQASSKYLAKHDEALVINLLILNLKLT
>LS483442.1|SQH68371.1|1023333_1025166_-|GTP-binding-protein-LepA
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>LS483442.1|SQH68370.1|1022199_1023081_-|LPXTG-motif-cell-wall-anchor-domain-containing-protein
MLTFGGASAVKAEENEKVREQEKLIQQLSEKLVEINDLQTLNGDKESIQSLVDYLTRRGKLEEEWMEYLNSGIQRKLFVGPKGPAGEKGEQGPTGKQGERGETGPAGPRGDKGETGDKGAQGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGQPGKPAPKTPEVPQNPDTAPHTPKTPRIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>LS483442.1|SQH68369.1|1021576_1022014_-|methionine-sulfoxide-reductase-B
METSDELKQRIGDLSYEVTQHAATESPFTGEYDNFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>LS483442.1|SQH68368.1|1020442_1021462_-|hypothetical-membrane-spanning-protein
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGLQKWLRLDVNTATLVGVGSSICGGSAVAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDALHHSNTLDGATIVKLTRTLAILPITLGLSLYRAKKEHDIVTEENFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHYLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>LS483442.1|SQH68367.1|1019810_1020236_-|PTS-system-mannose-specific-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>LS483442.1|SQH68366.1|1019300_1019792_-|PTS-system-mannose/fructose-family-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>LS483442.1|SQH68365.1|1018474_1019284_-|PTS-system,-mannose-specific-IIC-component
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>LS483442.1|SQH68364.1|1017650_1018478_-|phospotransferase-system-(PTS),-enzyme-II-component-D
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>LS483442.1|SQH68363.1|1015865_1017515_-|two-component-sensor-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDDLGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPSQDLLFASNPHLGNVFSKSVYIQEVLRATHPPKTLFKVAMDSEDGHYLMIIKPMIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLEVPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE
>LS483442.1|SQH68373.1|1026343_1027006_-|CRISPR-associated-family-protein
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYQYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>LS483442.1|SQH68374.1|1026995_1027307_-|CRISPR-associated-Cas2-family-protein
MFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>LS483442.1|SQH68375.1|1027333_1028203_-|cytoplasmic-protein
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>LS483442.1|SQH68376.1|1028202_1032309_-|CRISPR-associated-protein,-Csn1-family
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD
>LS483442.1|SQH68377.1|1032788_1033421_-|membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDSVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>LS483442.1|SQH68378.1|1033420_1034185_-|haloacid-dehalogenase-like-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>LS483442.1|SQH68379.1|1034184_1034937_-|oleoyl-[acyl-carrier-protein]-hydrolase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCEFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>LS483442.1|SQH68380.1|1034946_1036143_-|coproporphyrinogen-III-oxidase
MKNQGKWFIHRNILSSKWYNKTMSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFDSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>LS483442.1|SQH68381.1|1036139_1036781_-|acetyltransferase-GNAT-Family
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTPKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQMLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>LS483442.1|SQH68382.1|1036914_1038270_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTRPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448690	Streptococcus phage Javan169, complete genome	23669-23701	0	1.0
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448694	Streptococcus phage Javan179, complete genome	22038-22070	0	1.0
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448961	Streptococcus phage Javan494, complete genome	33452-33484	0	1.0
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448766	Streptococcus phage Javan465, complete genome	34324-34356	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448767	Streptococcus phage Javan467, complete genome	27751-27780	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448771	Streptococcus phage Javan481, complete genome	27273-27302	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448942	Streptococcus phage Javan448, complete genome	18704-18733	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	27856-27885	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448794	Streptococcus phage Javan525, complete genome	32300-32329	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448964	Streptococcus phage Javan502, complete genome	27561-27590	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448943	Streptococcus phage Javan450, complete genome	27751-27780	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	M19348	Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds	793-822	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448786	Streptococcus phage Javan509, complete genome	27751-27780	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448963	Streptococcus phage Javan498, complete genome	23373-23402	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448765	Streptococcus phage Javan459, complete genome	32298-32327	0	1.0
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448950	Streptococcus phage Javan464, complete genome	32963-32992	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448685	Streptococcus phage Javan155, complete genome	10626-10655	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448771	Streptococcus phage Javan481, complete genome	9590-9619	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448973	Streptococcus phage Javan522, complete genome	12466-12495	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448949	Streptococcus phage Javan460, complete genome	14351-14380	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448958	Streptococcus phage Javan486, complete genome	12226-12255	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448853	Streptococcus phage Javan144, complete genome	10626-10655	0	1.0
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448782	Streptococcus phage Javan501, complete genome	15112-15141	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448960	Streptococcus phage Javan492, complete genome	32359-32388	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448973	Streptococcus phage Javan522, complete genome	33771-33800	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448762	Streptococcus phage Javan447, complete genome	32491-32520	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448952	Streptococcus phage Javan472, complete genome	32767-32796	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	NC_004585	Streptococcus prophage 315.2, complete genome	33089-33118	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448961	Streptococcus phage Javan494, complete genome	32293-32322	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448966	Streptococcus phage Javan508, complete genome	32944-32973	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448959	Streptococcus phage Javan488, complete genome	33632-33661	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	NC_004587	Streptococcus prophage 315.4, complete genome	32210-32239	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	33480-33509	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448778	Streptococcus phage Javan493, complete genome	33411-33440	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448977	Streptococcus phage Javan530, complete genome	32115-32144	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	NC_009819	Streptococcus phage P9, complete genome	32293-32322	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448949	Streptococcus phage Javan460, complete genome	34292-34321	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448788	Streptococcus phage Javan511, complete genome	32115-32144	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448957	Streptococcus phage Javan484, complete genome	37599-37628	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448975	Streptococcus phage Javan526, complete genome	34193-34222	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448782	Streptococcus phage Javan501, complete genome	36551-36580	0	1.0
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448698	Streptococcus phage Javan187, complete genome	27593-27622	0	1.0
LS483442_4	4.4\|1026044\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026044-1026073	30	MK448941	Streptococcus phage Javan446, complete genome	43602-43631	0	1.0
LS483442_4	4.4\|1026044\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026044-1026073	30	MK448957	Streptococcus phage Javan484, complete genome	45212-45241	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448973	Streptococcus phage Javan522, complete genome	32539-32568	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_004585	Streptococcus prophage 315.2, complete genome	31845-31874	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448966	Streptococcus phage Javan508, complete genome	31700-31729	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448791	Streptococcus phage Javan517, complete genome	30871-30900	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_004587	Streptococcus prophage 315.4, complete genome	30966-30995	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	32236-32265	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448772	Streptococcus phage Javan483, complete genome	31712-31741	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448962	Streptococcus phage Javan496, complete genome	22171-22200	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448977	Streptococcus phage Javan530, complete genome	30871-30900	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_009819	Streptococcus phage P9, complete genome	30956-30985	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448793	Streptococcus phage Javan523, complete genome	32348-32377	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448788	Streptococcus phage Javan511, complete genome	30871-30900	0	1.0
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448954	Streptococcus phage Javan476, complete genome	30735-30764	0	1.0
LS483442_4	4.6\|1026176\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026176-1026205	30	MK448962	Streptococcus phage Javan496, complete genome	22264-22293	0	1.0
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448973	Streptococcus phage Javan522, complete genome	12058-12092	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	NC_028700	Streptococcus phage T12, complete genome	12019-12053	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448778	Streptococcus phage Javan493, complete genome	12073-12107	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448686	Streptococcus phage Javan157, complete genome	14021-14055	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448949	Streptococcus phage Javan460, complete genome	13943-13977	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448958	Streptococcus phage Javan486, complete genome	11818-11852	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448950	Streptococcus phage Javan464, complete genome	12065-12099	1	0.971
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448782	Streptococcus phage Javan501, complete genome	14704-14738	1	0.971
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448955	Streptococcus phage Javan478, complete genome	24096-24128	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448779	Streptococcus phage Javan497, complete genome	33182-33214	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448792	Streptococcus phage Javan521, complete genome	33433-33465	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	NC_004584	Streptococcus prophage 315.1, complete genome	33026-33058	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448962	Streptococcus phage Javan496, complete genome	24582-24614	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448770	Streptococcus phage Javan477, complete genome	33433-33465	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448978	Streptococcus phage Javan532, complete genome	32920-32952	1	0.97
LS483442_1	1.4\|563018\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	563018-563050	33	MK448785	Streptococcus phage Javan507, complete genome	32921-32953	1	0.97
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448976	Streptococcus phage Javan528, complete genome	32318-32347	1	0.967
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448951	Streptococcus phage Javan470, complete genome	32449-32478	1	0.967
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448665	Streptococcus phage Javan1, complete genome	12998-13027	1	0.967
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448849	Streptococcus phage Javan128, complete genome	9371-9400	1	0.967
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448850	Streptococcus phage Javan132, complete genome	14196-14225	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448871	Streptococcus phage Javan196, complete genome	33347-33376	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448775	Streptococcus phage Javan489, complete genome	35155-35184	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448697	Streptococcus phage Javan185, complete genome	33347-33376	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448953	Streptococcus phage Javan474, complete genome	36876-36905	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448693	Streptococcus phage Javan177, complete genome	33347-33376	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448774	Streptococcus phage Javan487, complete genome	26086-26115	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448696	Streptococcus phage Javan183, complete genome	33347-33376	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448868	Streptococcus phage Javan188, complete genome	33348-33377	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448866	Streptococcus phage Javan184, complete genome	33347-33376	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448699	Streptococcus phage Javan189, complete genome	33347-33376	1	0.967
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448867	Streptococcus phage Javan186, complete genome	33347-33376	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448784	Streptococcus phage Javan505, complete genome	32018-32047	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448947	Streptococcus phage Javan458, complete genome	32018-32047	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448965	Streptococcus phage Javan506, complete genome	32387-32416	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448959	Streptococcus phage Javan488, complete genome	32388-32417	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448949	Streptococcus phage Javan460, complete genome	33048-33077	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448958	Streptococcus phage Javan486, complete genome	31297-31326	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448689	Streptococcus phage Javan163, complete genome	32018-32047	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448974	Streptococcus phage Javan524, complete genome	32018-32047	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448950	Streptococcus phage Javan464, complete genome	31604-31633	1	0.967
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448789	Streptococcus phage Javan513, complete genome	32017-32046	1	0.967
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448771	Streptococcus phage Javan481, complete genome	9182-9216	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK449012	Streptococcus phage Javan94, complete genome	11655-11689	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	NC_004585	Streptococcus prophage 315.2, complete genome	13820-13854	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448955	Streptococcus phage Javan478, complete genome	13318-13352	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448966	Streptococcus phage Javan508, complete genome	13675-13709	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448795	Streptococcus phage Javan527, complete genome	17680-17714	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448772	Streptococcus phage Javan483, complete genome	13690-13724	2	0.943
LS483442_1	1.1\|562820\|35\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562820-562854	35	MK448673	Streptococcus phage Javan119, complete genome	13071-13105	2	0.943
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448749	Streptococcus phage Javan39, complete genome	23029-23061	2	0.939
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448859	Streptococcus phage Javan170, complete genome	23306-23338	2	0.939
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448962	Streptococcus phage Javan496, complete genome	12253-12285	2	0.939
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448850	Streptococcus phage Javan132, complete genome	22898-22930	2	0.939
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448676	Streptococcus phage Javan131, complete genome	25821-25853	2	0.939
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448688	Streptococcus phage Javan161, complete genome	23264-23296	2	0.939
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448960	Streptococcus phage Javan492, complete genome	13786-13819	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448762	Streptococcus phage Javan447, complete genome	13913-13946	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448791	Streptococcus phage Javan517, complete genome	12700-12733	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	NC_004587	Streptococcus prophage 315.4, complete genome	12795-12828	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	14065-14098	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448977	Streptococcus phage Javan530, complete genome	12700-12733	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448783	Streptococcus phage Javan503, complete genome	13616-13649	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448788	Streptococcus phage Javan511, complete genome	12700-12733	2	0.941
LS483442_1	1.3\|562952\|34\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562952-562985	34	MK448954	Streptococcus phage Javan476, complete genome	13389-13422	2	0.941
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448946	Streptococcus phage Javan456, complete genome	36791-36820	2	0.933
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448792	Streptococcus phage Javan521, complete genome	32271-32300	2	0.933
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448772	Streptococcus phage Javan483, complete genome	33074-33103	2	0.933
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448962	Streptococcus phage Javan496, complete genome	23420-23449	2	0.933
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448770	Streptococcus phage Javan477, complete genome	32271-32300	2	0.933
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448793	Streptococcus phage Javan523, complete genome	33707-33736	2	0.933
LS483442_4	4.1\|1025846\|30\|LS483442\|CRISPRCasFinder,CRT	1025846-1025875	30	MK448954	Streptococcus phage Javan476, complete genome	32097-32126	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH937470	Streptococcus phage CHPC925, complete genome	30198-30227	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448769	Streptococcus phage Javan471, complete genome	8724-8753	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448972	Streptococcus phage Javan520, complete genome	9008-9037	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448763	Streptococcus phage Javan451, complete genome	10205-10234	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448684	Streptococcus phage Javan151, complete genome	8724-8753	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448679	Streptococcus phage Javan137, complete genome	8363-8392	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448777	Streptococcus phage Javan491, complete genome	9301-9330	2	0.933
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448764	Streptococcus phage Javan457, complete genome	7665-7694	2	0.933
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448933	Streptococcus phage Javan420, complete genome	34530-34559	2	0.933
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448678	Streptococcus phage Javan135, complete genome	30719-30748	2	0.933
LS483442_4	4.6\|1026176\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026176-1026205	30	MK448854	Streptococcus phage Javan146, complete genome	33715-33744	2	0.933
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MK448675	Streptococcus phage Javan129, complete genome	23801-23833	3	0.909
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH937504	Streptococcus phage CHPC1091, complete genome	32661-32690	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	KX879641	Streptococcus phage CHPC577, complete genome	30567-30596	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892371	Streptococcus phage SW25, complete genome	27985-28014	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892372	Streptococcus phage SW26, complete genome	27681-27710	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH937493	Streptococcus phage CHPC1041, complete genome	34619-34648	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448754	Streptococcus phage Javan411, complete genome	11626-11655	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892368	Streptococcus phage SW20, complete genome	28934-28963	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	KU678389	Streptococcus virus 9871, complete genome	29072-29101	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892350	Streptococcus phage SW16, complete genome	28272-28301	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892374	Streptococcus phage SW28, complete genome	28407-28436	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	KU678391	Streptococcus virus 9873, complete genome	29157-29186	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MK448929	Streptococcus phage Javan400, complete genome	11626-11655	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892369	Streptococcus phage SW22, complete genome	28044-28073	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	NC_031094	Streptococcus virus 9872, complete genome	29449-29478	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892370	Streptococcus phage SW23, complete genome	27821-27850	3	0.9
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	MH892365	Streptococcus phage SW17, complete genome	28403-28432	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448972	Streptococcus phage Javan520, complete genome	27907-27936	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448763	Streptococcus phage Javan451, complete genome	27769-27798	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448944	Streptococcus phage Javan452, complete genome	35813-35842	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448766	Streptococcus phage Javan465, complete genome	33164-33193	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448941	Streptococcus phage Javan446, complete genome	35012-35041	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448773	Streptococcus phage Javan485, complete genome	28861-28890	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448958	Streptococcus phage Javan486, complete genome	32541-32570	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448777	Streptococcus phage Javan491, complete genome	27640-27669	3	0.9
LS483442_4	4.3\|1025978\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025978-1026007	30	MK448764	Streptococcus phage Javan457, complete genome	25382-25411	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448960	Streptococcus phage Javan492, complete genome	31127-31156	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448762	Streptococcus phage Javan447, complete genome	31259-31288	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448955	Streptococcus phage Javan478, complete genome	34011-34040	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448766	Streptococcus phage Javan465, complete genome	31917-31946	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448778	Streptococcus phage Javan493, complete genome	32179-32208	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448975	Streptococcus phage Javan526, complete genome	32961-32990	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MK448782	Streptococcus phage Javan501, complete genome	35319-35348	3	0.9
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_017736	Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence	9810-9839	6	0.8
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_017738	Helicobacter cetorum MIT 00-7128 plasmid pHCW, complete sequence	7219-7248	6	0.8
LS483442_4	4.2\|1025912\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1025912-1025941	30	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	426290-426319	7	0.767
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NZ_AP012556	Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence	142417-142446	7	0.767
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	681953-681982	7	0.767
LS483442_4	4.4\|1026044\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026044-1026073	30	NZ_CP040940	Cetia pacifica strain TB6 plasmid unnamed1, complete sequence	71110-71139	8	0.733
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MT774411	CrAssphage cr273_1, complete genome	18559-18591	9	0.727
LS483442_1	1.2\|562887\|33\|LS483442\|PILER-CR,CRISPRCasFinder,CRT	562887-562919	33	MT774410	CrAssphage cr272_1, complete genome	18954-18986	9	0.727
LS483442_4	4.4\|1026044\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026044-1026073	30	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	417643-417672	9	0.7
LS483442_4	4.5\|1026110\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026110-1026139	30	MG592459	Vibrio phage 1.084.O._10N.261.49.F5, partial genome	81434-81463	9	0.7
LS483442_4	4.6\|1026176\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026176-1026205	30	NZ_CP042810	Acetobacter oryzoeni strain B6 plasmid unnamed2, complete sequence	43471-43500	9	0.7
LS483442_4	4.6\|1026176\|30\|LS483442\|CRISPRCasFinder,CRT,PILER-CR	1026176-1026205	30	KC821618	Cellulophaga phage phi10:1, complete genome	24994-25023	9	0.7

1. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctgctaggtttgcttta	Protospacer
*********************************

2. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 0, identity: 1.0

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctgctaggtttgcttta	Protospacer
*********************************

3. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcataccttgatttgagcgagtaaactc	Protospacer
*********************************

4. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 0, identity: 1.0

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcataccttgatttgagcgagtaaactc	Protospacer
*********************************

5. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

6. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

7. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

8. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

9. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

10. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

11. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

12. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to M19348 (Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

13. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

14. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

15. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

16. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgcacctaatttttcctcggcact	Protospacer
******************************

17. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

18. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

19. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

20. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

21. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

22. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

23. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcggatattcct	Protospacer
******************************

24. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

25. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

26. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

27. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

28. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

29. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

30. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

31. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

32. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

33. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

34. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

35. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

36. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

37. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

38. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

39. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

40. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

41. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

42. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448698 (Streptococcus phage Javan187, complete genome) position: , mismatch: 0, identity: 1.0

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgtcagccaaccaccc	Protospacer
******************************

43. spacer 4.4|1026044|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 0, identity: 1.0

ttttttacaaattgagttatgttcatataa	CRISPR spacer
ttttttacaaattgagttatgttcatataa	Protospacer
******************************

44. spacer 4.4|1026044|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

ttttttacaaattgagttatgttcatataa	CRISPR spacer
ttttttacaaattgagttatgttcatataa	Protospacer
******************************

45. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

46. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

47. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

48. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

49. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

50. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

51. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

52. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

53. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

54. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

55. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

56. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

57. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgca	Protospacer
******************************

58. spacer 4.6|1026176|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 0, identity: 1.0

tcaagaaaataaccgaaactatcaaagttg	CRISPR spacer
tcaagaaaataaccgaaactatcaaagttg	Protospacer
******************************

59. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

60. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

61. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

62. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

63. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

64. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

65. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

66. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 1, identity: 0.971

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaattacatcag	Protospacer
****.******************************

67. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 1, identity: 0.97

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcgttttctgcttctgctaggtttgcttta	Protospacer
*****.***************************

68. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

69. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

70. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

71. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

72. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

73. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

74. spacer 1.4|563018|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.97

tgtccgcataccttgatttgagcgagtaaactc	CRISPR spacer
tgtccgcatgccttgatttgagcgagtaaactc	Protospacer
*********.***********************

75. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 1, identity: 0.967

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcacacctaatttttcctcggcact	Protospacer
*******.**********************

76. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 1, identity: 0.967

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcacacctaatttttcctcggcact	Protospacer
*******.**********************

77. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448665 (Streptococcus phage Javan1, complete genome) position: , mismatch: 1, identity: 0.967

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaactaattattgcggatattcct	Protospacer
*********.********************

78. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.967

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatattcct	Protospacer
********************.*********

79. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 1, identity: 0.967

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatattcct	Protospacer
********************.*********

80. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

81. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

82. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

83. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

84. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

85. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

86. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

87. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

88. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

89. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

90. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 1, identity: 0.967

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgtgatgcgtcagccaaccaccc	Protospacer
*********.********************

91. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccggcgca	Protospacer
************************.*****

92. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccggcgca	Protospacer
************************.*****

93. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgta	Protospacer
****************************.*

94. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgta	Protospacer
****************************.*

95. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccaacgca	Protospacer
*************************.****

96. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgta	Protospacer
****************************.*

97. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccggcgca	Protospacer
************************.*****

98. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccggcgca	Protospacer
************************.*****

99. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccagcgta	Protospacer
****************************.*

100. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 1, identity: 0.967

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaagaagaaatcaaccggcgca	Protospacer
************************.*****

101. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatgtcacgaaaatcaccaattacatcag	Protospacer
****.****.*************************

102. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatatcacgaaaatcaccaatcacatcag	Protospacer
****.**********************.*******

103. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatgtcacgaaaatcaccaattacatcag	Protospacer
****.****.*************************

104. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatgtcacgaaaatcaccaattacatcag	Protospacer
****.****.*************************

105. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatgtcacgaaaatcaccaattacatcag	Protospacer
****.****.*************************

106. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatgtcacgaaaatcaccaattacatcag	Protospacer
****.****.*************************

107. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaaaggcatgtcacgaaaatcaccaattacatcag	Protospacer
****.****.*************************

108. spacer 1.1|562820|35|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.943

aaaaagcatatcacgaaaatcaccaattacatcag	CRISPR spacer
aaatggcatatcacgaaaatcaccaattacatcag	Protospacer
*** .******************************

109. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 2, identity: 0.939

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcgttttctgcttctgctaggcttgcttta	Protospacer
*****.******************.********

110. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 2, identity: 0.939

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctgctaggctcgcttta	Protospacer
************************.*.******

111. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.939

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcgttttctgcttctgctaggttcgcttta	Protospacer
*****.********************.******

112. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 2, identity: 0.939

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctgctaggctcgcttta	Protospacer
************************.*.******

113. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.939

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctgctaggctcgcttta	Protospacer
************************.*.******

114. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.939

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctgctaggctcgcttta	Protospacer
************************.*.******

115. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

116. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

117. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

118. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

119. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

120. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

121. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

122. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

123. spacer 1.3|562952|34|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.941

tttttactttgattacatcccgcaatgtcacagc	CRISPR spacer
tttttgctttgattacattccgcaatgtcacagc	Protospacer
*****.************.***************

124. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccgagcacacctaatttttcctcggcact	Protospacer
***.***.**********************

125. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcacacctaatttttcctcagcact	Protospacer
*******.****************.*****

126. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccgagcacacctaatttttcctcggcact	Protospacer
***.***.**********************

127. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcacacctaatttttcctcagcact	Protospacer
*******.****************.*****

128. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcacacctaatttttcctcagcact	Protospacer
*******.****************.*****

129. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccaagcgaacctaatttttcctccgcact	Protospacer
******** *************** *****

130. spacer 4.1|1025846|30|LS483442|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.933

gccaagcgcacctaatttttcctcggcact	CRISPR spacer
gccgagcacacctaatttttcctcggcact	Protospacer
***.***.**********************

131. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH937470 (Streptococcus phage CHPC925, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatattcca	Protospacer
********************.********

132. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

133. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

134. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

135. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

136. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

137. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

138. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 2, identity: 0.933

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagatatacct	Protospacer
********************.***** ***

139. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 2, identity: 0.933

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaatcaaccaacgca	Protospacer
**********.**************.****

140. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 2, identity: 0.933

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaatcaatcagcgca	Protospacer
**********.***********.*******

141. spacer 4.6|1026176|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 2, identity: 0.933

tcaagaaaataaccgaaactatcaaagttg	CRISPR spacer
tcaagaaaataaccgaagctatcaaggttg	Protospacer
*****************.*******.****

142. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 3, identity: 0.909

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
aagtcattttctgcttctactaagtttgctttg	Protospacer
******************.***.*********.

143. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH937504 (Streptococcus phage CHPC1091, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

144. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to KX879641 (Streptococcus phage CHPC577, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

145. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892371 (Streptococcus phage SW25, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

146. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892372 (Streptococcus phage SW26, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

147. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH937493 (Streptococcus phage CHPC1041, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

148. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448754 (Streptococcus phage Javan411, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattatcgcagatattcca	Protospacer
*****************.**.********

149. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892368 (Streptococcus phage SW20, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

150. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to KU678389 (Streptococcus virus 9871, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

151. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892350 (Streptococcus phage SW16, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

152. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892374 (Streptococcus phage SW28, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

153. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to KU678391 (Streptococcus virus 9873, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

154. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448929 (Streptococcus phage Javan400, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattatcgcagatattcca	Protospacer
*****************.**.********

155. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892369 (Streptococcus phage SW22, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

156. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_031094 (Streptococcus virus 9872, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

157. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892370 (Streptococcus phage SW23, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

158. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MH892365 (Streptococcus phage SW17, complete genome) position: , mismatch: 3, identity: 0.9

agagcgcaattaattattgcggatattcct	CRISPR spacer
agagcgcaattaattattgcagacattcca	Protospacer
********************.**.*****

159. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

160. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

161. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
taaatattgtaatgcgtcagccaaccaccc	Protospacer
* *******..*******************

162. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

163. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

164. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

165. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

166. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

167. spacer 4.3|1025978|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 3, identity: 0.9

ttaatattgcgatgcgtcagccaaccaccc	CRISPR spacer
ttaatattgcgatgcgccagccaagcacac	Protospacer
****************.******* *** *

168. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

169. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

170. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

171. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

172. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

173. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

174. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.9

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcgcaggaagaaattaaccagcgta	Protospacer
**********.********.********.*

175. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_017736 (Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence) position: , mismatch: 6, identity: 0.8

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcccaaaaagaaatcaacaaataca	Protospacer
******* ***.*********** *...**

176. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_017738 (Helicobacter cetorum MIT 00-7128 plasmid pHCW, complete sequence) position: , mismatch: 6, identity: 0.8

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
aaaaagcccaaaaagaaatcaacaaataca	Protospacer
******* ***.*********** *...**

177. spacer 4.2|1025912|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 7, identity: 0.767

agagcgcaattaattattgcggatattcct	CRISPR spacer
aaagcggaattaattattgaggataaaacg	Protospacer
*.**** ************ *****   *

178. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP012556 (Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
ccgcggcgcaagaagaaatcatccggcgca	Protospacer
  . .**************** **.*****

179. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.767

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
cacaagctcaagaagatatcaaccagctgc	Protospacer
 * **** ******** **********

180. spacer 4.4|1026044|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040940 (Cetia pacifica strain TB6 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ttttttacaaattgagttatgttcatataa	CRISPR spacer
tcaggtagaaattgagttatgttcataggt	Protospacer
*.   ** ******************* .

181. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 9, identity: 0.727

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
gtatatgtatctgcttctgctgggtttgctgta	Protospacer
. .*   * ************.******** **

182. spacer 1.2|562887|33|LS483442|PILER-CR,CRISPRCasFinder,CRT matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 9, identity: 0.727

aagtcattttctgcttctgctaggtttgcttta	CRISPR spacer
gtatatgtatctgcttctgctgggtttgctgta	Protospacer
. .*   * ************.******** **

183. spacer 4.4|1026044|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ttttttacaaattgagttatgttcatataa	CRISPR spacer
ccgatccgaaattgagttatgttcagatac	Protospacer
..  *.  ***************** ***

184. spacer 4.5|1026110|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to MG592459 (Vibrio phage 1.084.O._10N.261.49.F5, partial genome) position: , mismatch: 9, identity: 0.7

aaaaagcgcaagaagaaatcaaccagcgca	CRISPR spacer
caaaagcgcacgaaggaatcaaccgcaatc	Protospacer
 ********* ****.********.  ..

185. spacer 4.6|1026176|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042810 (Acetobacter oryzoeni strain B6 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

tcaagaaaataaccgaaactatcaaagttg	CRISPR spacer
atttcaaaataaccaaaactatcaatgtct	Protospacer
 .   *********.********** **.

186. spacer 4.6|1026176|30|LS483442|CRISPRCasFinder,CRT,PILER-CR matches to KC821618 (Cellulophaga phage phi10:1, complete genome) position: , mismatch: 9, identity: 0.7

tcaagaaaataaccgaaactatcaaagttg	CRISPR spacer
atctctaaagaacctaaactatcaaagttt	Protospacer
 .    *** **** **************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36560 : 48921

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH67401.1\|36560_40334_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.5e-38	27.3
SQH67402.1\|40494_41949_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.8e-54	32.7
SQH67403.1\|41976_42999_+	phosphoribosylaminoimidazole synthetase	R9TMC7	Synechococcus_phage	1.1e-63	42.1
SQH67404.1\|43166_43721_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.2e-25	36.1
SQH67405.1\|43904_45452_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	8.3e-44	51.3
SQH67406.1\|45509_46634_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQH67407.1\|46886_48152_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQH67408.1\|48309_48921_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	4.0e-18	42.3

DBSCAN-SWA_2

122636 : 183316

Streptococcus_phage(23.08%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH67485.1\|122636_123959_-\|transposase	transposase	A0A218MNE7	uncultured_virus	2.4e-39	27.8
SQH67486.1\|123921_124149_-\|transposase	putative transposase remnant (pseudogene)	NA	NA	NA	NA
SQH67487.1\|124199_124550_-	IS66 Orf2 like family protein	NA	NA	NA	NA
SQH67488.1\|124925_125609_+	sortase protein SrtC	NA	NA	NA	NA
SQH67489.1\|125802_126468_-	Uncharacterised protein	NA	NA	NA	NA
SQH67490.1\|126816_128223_+	short-chain fatty acid transporter	NA	NA	NA	NA
SQH67491.1\|128290_128686_-	LysR family transcriptional regulator	NA	NA	NA	NA
SQH67492.1\|128781_129201_-	LysR family transcriptional regulator	NA	NA	NA	NA
SQH67493.1\|129321_130506_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
SQH67494.1\|130517_131177_+	acetyl-CoA:acetoacetyl-CoA transferase subunit alpha	NA	NA	NA	NA
SQH67495.1\|131179_131827_+	acetate CoA-transferase beta subunit	NA	NA	NA	NA
SQH67496.1\|131948_132629_-	sensory box protein	NA	NA	NA	NA
SQH67497.1\|132802_133168_+	endoribonuclease L-PSP	NA	NA	NA	NA
SQH67498.1\|133204_134224_+	Transcriptional regulator pfoR	NA	NA	NA	NA
SQH67499.1\|134678_134999_+	V-type ATP synthase subunit G	NA	NA	NA	NA
SQH67500.1\|134988_136989_+	V-type ATPase 116kDa subunit	NA	NA	NA	NA
SQH67501.1\|136990_137470_+	V-type sodium ATP synthase subunit K	NA	NA	NA	NA
SQH67502.1\|137537_138122_+	V-type sodium ATP synthase subunit E	NA	NA	NA	NA
SQH67503.1\|138137_139136_+	ATP synthase (C/AC39) subunit	NA	NA	NA	NA
SQH67504.1\|139132_139453_+	V-type ATP synthase subunit F	NA	NA	NA	NA
SQH67505.1\|139653_141429_+	V-type sodium ATPase catalytic subunit A	NA	NA	NA	NA
SQH67506.1\|141429_142845_+	V-type sodium ATPase subunit B	NA	NA	NA	NA
SQH67507.1\|142889_143516_+	V-type ATP synthase subunit D	NA	NA	NA	NA
SQH67508.1\|143635_144898_-	tellurite resistance protein	M1PLC8	Streptococcus_phage	3.8e-148	67.9
SQH67509.1\|144910_145789_-	membrane associated protein	M1PFV6	Streptococcus_phage	7.5e-26	42.8
SQH67510.1\|146226_147519_+	adenylosuccinate synthetase	G5CQQ4	Megavirus	1.9e-70	36.5
SQH67511.1\|147845_148889_+	basic membrane family protein	A0A0A7DN02	Lactobacillus_phage	2.7e-62	39.7
SQH67512.1\|149061_149601_+	transcription antitermination protein	NA	NA	NA	NA
SQH67513.1\|149972_151316_+	Nicotine adenine dinucleotide glycohydrolase (NADGH) SPN	NA	NA	NA	NA
SQH67514.1\|151449_151806_+	streptococcal NAD glycohydrolase inhibitor	NA	NA	NA	NA
SQH67515.1\|151829_153545_+	streptolysin O	NA	NA	NA	NA
SQH67516.1\|153794_154223_+	Uncharacterised protein	NA	NA	NA	NA
SQH67517.1\|154424_154625_-	Uncharacterised protein	NA	NA	NA	NA
SQH67518.1\|155036_155204_-	Uncharacterised protein	NA	NA	NA	NA
SQH67519.1\|155388_155715_-	Uncharacterised protein	NA	NA	NA	NA
SQH67520.1\|155949_157338_+	cystathionine beta-lyase	A0A0B5JD48	Pandoravirus	5.3e-18	29.5
SQH67521.1\|157512_160014_+\|tRNA	leucyl-tRNA synthetase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.8
SQH67522.1\|160320_161754_+	Ascorbate-specific PTS system, EIIC component	NA	NA	NA	NA
SQH67523.1\|161824_162103_+	PTS system, 3-keto-L-gulonate specific IIB component	NA	NA	NA	NA
SQH67524.1\|162224_162710_+	PTS system, 3-keto-L-gulonate specific IIA component	NA	NA	NA	NA
SQH67525.1\|162800_163463_+	3-keto-L-gulonate-6-phosphate decarboxylase	NA	NA	NA	NA
SQH67526.1\|163467_164331_+	L-xylulose 5-phosphate 3-epimerase	NA	NA	NA	NA
SQH67527.1\|164332_165037_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
SQH67528.1\|165361_167008_+	BglG family transcription antiterminator	NA	NA	NA	NA
SQH67529.1\|167260_168352_+	putative L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
SQH67530.1\|168839_170036_+	glycine betaine transport ATP-binding protein	G3M9Y6	Bacillus_virus	4.0e-30	39.2
SQH67531.1\|170051_171779_+	glycine betaine transport system permease	NA	NA	NA	NA
SQH67532.1\|171909_174552_+	DNA polymerase I	A0A142F1Q9	Bacillus_phage	4.2e-64	35.3
SQH67533.1\|174738_175194_+	coA binding domain-containing protein	NA	NA	NA	NA
SQH67534.1\|175245_175713_+	ferric uptake regulator family protein	NA	NA	NA	NA
SQH67535.1\|176027_176168_+	virR-like protein	NA	NA	NA	NA
SQH67536.1\|176389_177724_+	phosphoadenosine phosphosulfate reductase family protein	L0P6Z6	Lactobacillus_phage	1.5e-86	39.2
SQH67537.1\|177716_178247_+	parB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	7.1e-64	68.6
SQH67538.1\|178239_178449_+	putative uncharacterized conserved protein	NA	NA	NA	NA
SQH67539.1\|178569_178791_-\|transposase	transposase	A4JX31	Burkholderia_virus	2.0e-07	40.9
SQH67540.1\|179103_179400_-\|transposase	transposase	NA	NA	NA	NA
SQH67541.1\|179432_179726_-\|transposase	transposase	NA	NA	NA	NA
SQH67542.1\|179803_181114_-	membrane protein	NA	NA	NA	NA
SQH67543.1\|181337_182210_+	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA
SQH67544.1\|182509_183316_-\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	4.9e-64	50.4

DBSCAN-SWA_3

621348 : 662193

Streptococcus_phage(72.34%)

tail,head,transposase,terminase,integrase,holin

attL 621254:621313|attR 629968:631286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
621254:621313	attL	NA	NA	NA	NA
SQH67938.1\|621348_622482_+\|transposase	transposase	NA	NA	NA	NA
SQH67939.1\|622649_623489_+	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7
SQH67940.1\|623463_624324_+	GDSL family lipase	NA	NA	NA	NA
SQH67941.1\|624301_624889_+	membrane protein	NA	NA	NA	NA
SQH67942.1\|624987_625263_+	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
SQH67943.1\|625352_626495_-\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
SQH67944.1\|626618_626885_-	phage protein	NA	NA	NA	NA
SQH67945.1\|626896_627277_-	peptidase	A0A1S5SFH2	Streptococcus_phage	8.0e-41	61.1
SQH67946.1\|627280_627553_-	Cro/CI family phage transcriptional regulator	Q7Y4M0	Streptococcus_phage	4.8e-32	72.8
SQH67947.1\|628325_628475_-	Uncharacterised protein	NA	NA	NA	NA
SQH67948.1\|628798_629932_-\|transposase	transposase	NA	NA	NA	NA
SQH67949.1\|630106_630298_+	phage protein	A7J270	Streptococcus_phage	4.0e-25	92.1
SQH67950.1\|630309_631026_+	phage antirepressor KilAC domain-containing protein	C9WB91	Streptococcus_virus	6.8e-118	87.7
SQH67951.1\|631057_631324_+	phage protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
629968:631286	attR	NA	NA	NA	NA
SQH67952.1\|631258_632065_-	protein Ymh	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
SQH67953.1\|632206_632446_-	phage protein	NA	NA	NA	NA
SQH67954.1\|632612_632798_+	phage regulatory protein	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
SQH67955.1\|632875_633187_+	excisionase	A0A1S5SA25	Streptococcus_phage	4.1e-43	78.4
SQH67956.1\|633188_633374_+	phage protein	Q938N3	Temperate_phage	5.8e-21	88.5
SQH67957.1\|633857_634247_+	DNA replication protein dnaD	Q938N2	Temperate_phage	9.3e-45	81.4
SQH67958.1\|634227_634461_+	phage protein	Q938N1	Temperate_phage	6.1e-36	94.8
SQH67959.1\|634457_634598_+	phage protein	NA	NA	NA	NA
SQH67960.1\|634606_634813_+	phage protein	NA	NA	NA	NA
SQH67961.1\|634868_635198_+	phage protein	J7KGX3	Streptococcus_phage	2.1e-45	83.5
SQH67962.1\|635200_636130_+	recombinase, phage RecT family protein	M1NRN6	Streptococcus_phage	1.1e-91	72.2
SQH67963.1\|636126_636924_+	phage protein	J7KGZ1	Streptococcus_phage	6.0e-131	84.5
SQH67964.1\|636933_637101_+	phage protein	A0A1S5SEF3	Streptococcus_phage	3.3e-07	51.9
SQH67965.1\|637278_637620_+	phage protein	M1NS23	Streptococcus_phage	1.1e-12	38.7
SQH67966.1\|637616_638129_+	phage protein	Q708P9	Streptococcus_phage	2.3e-67	78.0
SQH67967.1\|638212_638482_+	phage protein	A7J287	Streptococcus_phage	9.6e-25	71.9
SQH67968.1\|638483_639119_+	phage protein	L0P368	Streptococcus_phage	2.0e-89	69.4
SQH67969.1\|639386_639806_+	phage protein	A0A1X9I5B5	Streptococcus_phage	8.7e-57	79.9
SQH67970.1\|640407_640764_+	phage protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
SQH67971.1\|640760_642029_+	structural phage protein	M1PFL4	Streptococcus_phage	2.2e-188	75.6
SQH67972.1\|642021_643515_+	phage protein	M1Q184	Streptococcus_phage	2.0e-87	55.0
SQH67973.1\|643520_643745_+	phage protein	NA	NA	NA	NA
SQH67974.1\|643794_643974_+	phage protein	NA	NA	NA	NA
SQH67975.1\|643966_644233_+	phage protein	A0A097PAR8	Streptococcus_pyogenes_phage	7.3e-33	86.4
SQH67976.1\|644342_645758_+\|terminase	phage terminase	A0A0B5A091	Streptococcus_phage	2.9e-213	74.2
SQH67977.1\|645838_646300_+	phage protein	M1Q1L0	Streptococcus_phage	4.5e-38	53.2
SQH67978.1\|646324_647236_+\|head	phage, major head protein	M1PFL0	Streptococcus_phage	9.9e-114	67.3
SQH67979.1\|647235_647436_+	phage protein	NA	NA	NA	NA
SQH67980.1\|647445_647868_+	phage Gp19/Gp15/Gp42 family protein	A0A0B5A2F6	Streptococcus_phage	3.7e-47	70.8
SQH67981.1\|647827_648166_+	phage protein	M1PFF8	Streptococcus_phage	2.2e-42	70.3
SQH67982.1\|648158_648395_+	phage protein	A0A0B5A7G2	Streptococcus_phage	2.5e-21	71.4
SQH67983.1\|648395_648731_+	phage protein	A0A1P8BMR5	Lactococcus_phage	9.8e-35	64.9
SQH67984.1\|648742_649336_+\|tail	major tail protein	M1PKG8	Streptococcus_phage	3.5e-59	62.5
SQH67985.1\|649346_649610_+	phage protein	A0A0B5A2F3	Streptococcus_phage	1.0e-18	55.8
SQH67986.1\|649624_649996_+	phage protein	M1PL84	Streptococcus_phage	2.9e-35	62.4
SQH67987.1\|649995_652353_+	phage protein	M1NRG5	Streptococcus_phage	6.5e-141	50.6
SQH67988.1\|652349_653045_+	phage protein	A0A1B1P761	Bacillus_phage	7.6e-05	29.6
SQH67989.1\|653041_654910_+	phage minor structural, region domain-containing protein	Q938J9	Temperate_phage	2.4e-90	56.5
SQH67990.1\|654921_655359_+	phage protein	Q938J8	Temperate_phage	3.8e-71	97.9
SQH67991.1\|655355_655973_+	phage protein	Q938J7	Temperate_phage	4.4e-73	83.9
SQH67992.1\|655982_656258_+\|holin	phage holin	A7J2B2	Streptococcus_phage	2.6e-41	100.0
SQH67993.1\|656254_656482_+	phage protein	A7J2B3	Streptococcus_phage	1.3e-30	98.7
SQH67994.1\|656597_657803_+	phage-associated cell wall hydrolase	Q938J4	Temperate_phage	5.9e-207	84.3
SQH67995.1\|657872_658307_-	phage membrane protein	NA	NA	NA	NA
SQH67996.1\|658578_659379_-	streptodornase	NA	NA	NA	NA
SQH67997.1\|659617_659800_+	paratox	A3F673	Streptococcus_phage	1.4e-19	76.7
SQH67998.1\|660330_662193_+	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	6.0e-89	33.7

DBSCAN-SWA_4

686720 : 742316

Enterococcus_phage(23.08%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH68022.1\|686720_687749_-\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQH68023.1\|687950_688655_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQH68024.1\|688773_689478_+	16S pseudouridylate synthetase	NA	NA	NA	NA
SQH68025.1\|689772_690735_+	competence CoiA-like family protein	NA	NA	NA	NA
SQH68026.1\|690747_692553_+	oligoendopeptidase F	NA	NA	NA	NA
SQH68027.1\|692928_694125_+	major facilitator superfamily protein	NA	NA	NA	NA
SQH68028.1\|694226_694898_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.4e-08	27.2
SQH68029.1\|694960_696016_+	foldase protein prsA 1	NA	NA	NA	NA
SQH68030.1\|696402_699021_+\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	1.8e-62	34.1
SQH68031.1\|699375_699597_+	XRE family transcriptional regulator	NA	NA	NA	NA
SQH68032.1\|699593_700355_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQH68033.1\|700373_701069_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQH68034.1\|701160_701382_-\|transposase	transposase	A4JX31	Burkholderia_virus	2.0e-07	40.9
SQH68035.1\|701694_701991_-\|transposase	transposase	NA	NA	NA	NA
SQH68036.1\|702023_702317_-\|transposase	transposase	NA	NA	NA	NA
SQH68037.1\|702454_703768_-	chloride channel protein	NA	NA	NA	NA
SQH68038.1\|703742_704702_-	ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	3.7e-127	70.5
SQH68039.1\|705034_707194_-	ribonucleotide-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.4e-262	63.6
SQH68040.1\|707213_707432_-	glutaredoxin	A0A249XUR7	Enterococcus_phage	1.1e-13	49.3
SQH68041.1\|707824_708088_+	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA
SQH68042.1\|708092_709826_+	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA
SQH68043.1\|710010_711438_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
SQH68044.1\|711532_712807_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
SQH68045.1\|712917_714003_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-33	32.3
SQH68046.1\|714100_714727_+	uridine kinase	A0A1V0SAA3	Catovirus	2.2e-35	39.7
SQH68047.1\|714806_715070_+	membrane protein	NA	NA	NA	NA
SQH68048.1\|715122_715932_-	membrane protein	NA	NA	NA	NA
SQH68049.1\|716076_716574_+	GAF domain-containing protein	NA	NA	NA	NA
SQH68050.1\|716573_718244_+	DNA polymerase III subunits gamma and tau	A0A1U9WR94	Streptococcus_virus	5.1e-47	41.1
SQH68051.1\|718516_719458_-	biotin-protein ligase	NA	NA	NA	NA
SQH68052.1\|719661_722040_+	leucine Rich Repeat family protein	NA	NA	NA	NA
SQH68053.1\|722576_723773_+	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	1.3e-137	65.2
SQH68054.1\|723946_725206_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SQH68055.1\|725563_726217_+	immunoglobulin G-binding protein G	NA	NA	NA	NA
SQH68056.1\|726454_726997_+	acetyltransferase family protein	NA	NA	NA	NA
SQH68057.1\|727005_728289_+	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA
SQH68058.1\|728304_729165_+	methionine aminopeptidase Map	NA	NA	NA	NA
SQH68059.1\|729166_730132_+	ribonuclease BN-like family protein	NA	NA	NA	NA
SQH68060.1\|730242_731526_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
SQH68061.1\|731518_732010_+	shikimate kinase	NA	NA	NA	NA
SQH68062.1\|732217_733669_+	cell envelope-related function transcriptional attenuator common domain-containing protein	NA	NA	NA	NA
SQH68063.1\|733750_735106_+\|tRNA	tRNA (uracil-5-)-methyltransferase	D0R096	Streptococcus_phage	2.3e-252	98.2
SQH68064.1\|735410_735923_+	phosphorylase superfamily protein	F5CA76	Streptococcus_phi-m46.1-like_phage	3.0e-91	97.1
SQH68065.1\|736007_736409_+	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA
SQH68066.1\|736515_738000_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQH68067.1\|738373_739594_+	sugar (and other) transporter family protein	NA	NA	NA	NA
SQH68068.1\|739713_740079_-	thioesterase superfamily protein	NA	NA	NA	NA
SQH68069.1\|740193_740925_+	16S pseudouridylate synthase	NA	NA	NA	NA
SQH68070.1\|740973_741780_-\|transposase	transposase, IS861	A0A1B1P773	Bacillus_phage	4.9e-64	50.0
SQH68071.1\|741800_742316_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

780281 : 828021

Streptococcus_pyogenes_phage(71.19%)

portal,terminase,integrase,tail

attL 783648:783707|attR 821605:821700

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH68105.1\|780281_782546_+	glycogen phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
SQH68106.1\|782802_783423_-	phage protein	NA	NA	NA	NA
783648:783707	attL	NA	NA	NA	NA
SQH68107.1\|783785_784874_-\|integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	4.7e-203	99.2
SQH68108.1\|784994_785888_-	phage protein	A0A1I9LJQ0	Stx_converting_phage	1.2e-68	47.5
SQH68109.1\|785923_786748_-	phage transcriptional repressor	A0A097PBE5	Streptococcus_pyogenes_phage	1.2e-131	91.6
SQH68110.1\|786906_787008_+	Uncharacterised protein	NA	NA	NA	NA
SQH68111.1\|787104_787263_+	phage protein	A0A097PAP2	Streptococcus_pyogenes_phage	4.8e-24	100.0
SQH68112.1\|787292_787892_-	phage protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
SQH68113.1\|787945_788155_+	phage protein	A0A097PAQ9	Streptococcus_pyogenes_phage	1.7e-32	100.0
SQH68114.1\|788143_788530_-	phage protein	A0A097PAT1	Streptococcus_pyogenes_phage	1.2e-65	100.0
SQH68115.1\|788603_788804_+	helix-turn-helix family protein	A0A141E205	Streptococcus_phage	2.7e-08	59.6
SQH68116.1\|788913_789123_-	Uncharacterised protein	NA	NA	NA	NA
SQH68117.1\|789253_789715_-	phage protein	NA	NA	NA	NA
SQH68118.1\|789928_790759_+	dnaD and phage-associated domain-containing protein	A0A1S5S918	Streptococcus_phage	6.4e-67	54.7
SQH68119.1\|790745_791528_+	phage replication protein	A0A097PAQ0	Streptococcus_pyogenes_phage	3.9e-143	96.9
SQH68120.1\|791518_791656_+	phage protein	J7KBQ4	Streptococcus_phage	2.7e-07	78.4
SQH68121.1\|791668_792022_+	phage protein	A0A097PAU3	Streptococcus_pyogenes_phage	2.8e-16	54.0
SQH68122.1\|792002_792257_+	phage protein	Q938N0	Temperate_phage	1.8e-41	97.6
SQH68123.1\|792278_792761_+	phage protein	Q938M9	Temperate_phage	4.1e-50	99.4
SQH68124.1\|792761_793436_+	Single-stranded DNA-binding protein	Q938M8	Temperate_phage	5.8e-103	96.9
SQH68125.1\|793428_793854_+	single-stranded DNA-binding protein ssb	A0A097PAQ3	Streptococcus_pyogenes_phage	2.8e-55	82.3
SQH68126.1\|794062_794503_+	phage protein	A0A097PAS0	Streptococcus_pyogenes_phage	4.5e-80	97.9
SQH68127.1\|794499_794856_+	phage protein	A0A097PAU4	Streptococcus_pyogenes_phage	2.9e-61	100.0
SQH68128.1\|794852_795098_+	phage protein	A0A097PBE9	Streptococcus_pyogenes_phage	1.8e-41	100.0
SQH68129.1\|795097_795334_+	phage protein	A0A097PAQ7	Streptococcus_pyogenes_phage	2.4e-40	100.0
SQH68130.1\|795330_795501_+	phage protein	Q938M0	Temperate_phage	7.9e-09	87.1
SQH68131.1\|795497_795782_+	phage membrane protein	A0A097PAV1	Streptococcus_pyogenes_phage	8.9e-37	87.2
SQH68132.1\|795783_796416_+	phage protein	L0P368	Streptococcus_phage	1.1e-84	68.1
SQH68133.1\|796418_796943_+	phage protein	J7KK91	Streptococcus_phage	2.3e-38	51.1
SQH68134.1\|796939_797206_+	phage protein	NA	NA	NA	NA
SQH68135.1\|797491_797926_+	autolysin regulatory protein	J7KDQ1	Streptococcus_phage	2.2e-71	94.4
SQH68136.1\|798535_798916_+	phage protein	A0A097PAR5	Streptococcus_pyogenes_phage	1.0e-64	100.0
SQH68137.1\|798905_800180_+\|terminase	terminase large subunit	A0A097PAV9	Streptococcus_pyogenes_phage	1.1e-251	100.0
SQH68138.1\|800179_801505_+\|portal	portal protein	A0A097PAT2	Streptococcus_pyogenes_phage	1.6e-237	97.2
SQH68139.1\|801473_802382_+	phage protein	A0A097PBF2	Streptococcus_pyogenes_phage	6.7e-86	98.2
SQH68140.1\|802388_802658_+	phage protein	Q938K9	Temperate_phage	5.6e-33	85.2
SQH68141.1\|802659_802794_+	Uncharacterised protein	NA	NA	NA	NA
SQH68142.1\|802902_803472_+	phage scaffold protein	A0A097PAW3	Streptococcus_pyogenes_phage	8.5e-71	98.4
SQH68143.1\|803490_804381_+	phage protein	A0A097PAW2	Streptococcus_pyogenes_phage	8.6e-86	99.4
SQH68144.1\|804393_804687_+	phage protein	A0A097PBF3	Streptococcus_pyogenes_phage	2.0e-47	100.0
SQH68145.1\|804700_805045_+	phage protein	A0A097PAS2	Streptococcus_pyogenes_phage	1.1e-54	100.0
SQH68146.1\|805041_805353_+	phage protein	A0A097PAW7	Streptococcus_pyogenes_phage	1.0e-49	98.1
SQH68147.1\|805361_805745_+	antigen C	A0A097PAT9	Streptococcus_pyogenes_phage	1.7e-59	100.0
SQH68148.1\|805746_806157_+	antigen B	A0A097PAW5	Streptococcus_pyogenes_phage	1.4e-70	100.0
SQH68149.1\|806168_806675_+	antigen A	A0A097PBF4	Streptococcus_pyogenes_phage	2.6e-79	100.0
SQH68150.1\|806687_807005_+	phage protein	A0A097PAS6	Streptococcus_pyogenes_phage	4.9e-52	100.0
SQH68151.1\|806977_807436_+	phage protein	A0A097PAX1	Streptococcus_pyogenes_phage	2.3e-82	100.0
SQH68152.1\|807428_809234_+	phage, tape measure protein	A0A097PAU2	Streptococcus_pyogenes_phage	8.8e-263	99.7
SQH68153.1\|809234_810719_+\|tail	siphovirus tail component family protein	A0A097PAW9	Streptococcus_pyogenes_phage	4.3e-292	99.8
SQH68154.1\|810719_814160_+	phage protein	A0A097PBF5	Streptococcus_pyogenes_phage	0.0e+00	98.7
SQH68155.1\|814164_816027_+	phage structural protein	A0A097PAT0	Streptococcus_pyogenes_phage	0.0e+00	99.4
SQH68156.1\|816037_816385_+	phage protein	A0A097PAX5	Streptococcus_pyogenes_phage	6.5e-58	99.1
SQH68157.1\|816398_816521_+	phage protein	A0A097PAU6	Streptococcus_pyogenes_phage	4.8e-16	100.0
SQH68158.1\|816534_816858_+	phage protein	A0A097PAX2	Streptococcus_pyogenes_phage	7.7e-53	100.0
SQH68159.1\|816857_817190_+	N-acetylmuramoyl-L-alanine amidase	A0A097PBF6	Streptococcus_pyogenes_phage	7.4e-51	99.1
SQH68160.1\|817191_817956_+	phage-associated cell wall hydrolase	A0A097PAT3	Streptococcus_pyogenes_phage	8.0e-149	98.4
SQH68161.1\|817967_818570_+	phage protein	A0A097PAX9	Streptococcus_pyogenes_phage	7.8e-91	98.8
SQH68162.1\|818580_819354_+	phage protein	A0A097PAV0	Streptococcus_pyogenes_phage	3.9e-135	100.0
SQH68163.1\|819363_819585_+	phage protein	A0A097PAX7	Streptococcus_pyogenes_phage	2.5e-18	84.5
SQH68164.1\|819584_820244_+	phage protein	A0A097PBF7	Streptococcus_pyogenes_phage	8.5e-123	100.0
SQH68165.1\|820365_821121_-	exotoxin type A	A0A097PAT7	Streptococcus_pyogenes_phage	2.2e-143	100.0
SQH68166.1\|821341_821530_+	paratox	J7KIW4	Streptococcus_phage	3.4e-21	82.3
SQH68167.1\|822120_822735_+	membrane protein	M1Q152	Streptococcus_phage	1.1e-50	52.3
821605:821700	attR	NA	NA	NA	NA
SQH68168.1\|822861_823647_-	ABC transporter permease protein	NA	NA	NA	NA
SQH68169.1\|823656_824355_-	ABC transporter family protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
SQH68170.1\|824354_824726_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQH68171.1\|824910_828021_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	3.7e-120	29.9

DBSCAN-SWA_6

1079508 : 1134781

Bacillus_phage(28.57%)

head,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH68419.1\|1079508_1080408_-\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQH68420.1\|1080541_1080718_+	putative uncharacterized protein ORF 3	NA	NA	NA	NA
SQH68421.1\|1080835_1081744_-	exfoliative toxin	NA	NA	NA	NA
SQH68422.1\|1081980_1082400_-	glutathione S-transferase	NA	NA	NA	NA
SQH68423.1\|1082710_1083697_-	Rhodanese domain protein UPF0176, Firmicutes subgroup	NA	NA	NA	NA
SQH68424.1\|1083895_1084198_+	Uncharacterised protein	NA	NA	NA	NA
SQH68425.1\|1084744_1085950_-	30S ribosomal protein S1	NA	NA	NA	NA
SQH68426.1\|1086340_1086571_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQH68427.1\|1086634_1087657_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQH68428.1\|1087779_1090203_-	topoisomerase IV subunit	G3M9Z5	Bacillus_virus	1.6e-97	33.3
SQH68429.1\|1090329_1092279_-	topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	5.6e-122	42.0
SQH68430.1\|1092413_1093055_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQH68431.1\|1093112_1094381_-	dihydroorotase	NA	NA	NA	NA
SQH68432.1\|1094512_1095166_-	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	2.3e-40	40.1
SQH68433.1\|1095298_1095949_-	amino-acid ABC transporter permease yckA	NA	NA	NA	NA
SQH68434.1\|1095977_1096841_-	cystine-binding protein	NA	NA	NA	NA
SQH68435.1\|1096958_1098413_-	amidase	NA	NA	NA	NA
SQH68436.1\|1098609_1099239_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
SQH68437.1\|1099296_1099989_-	orotidine 5'-phosphate decarboxylase	NA	NA	NA	NA
SQH68438.1\|1100265_1100802_-	Uncharacterised protein	NA	NA	NA	NA
SQH68439.1\|1101074_1101929_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQH68440.1\|1102007_1102796_-	LytR family transcriptional regulator	NA	NA	NA	NA
SQH68441.1\|1102788_1103502_-	Purine nucleoside phosphorylase	NA	NA	NA	NA
SQH68442.1\|1104164_1104974_-	purine nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	6.6e-53	42.2
SQH68443.1\|1104957_1105398_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.0e-35	55.3
SQH68444.1\|1105416_1106628_-	phosphopentomutase	NA	NA	NA	NA
SQH68445.1\|1106704_1107388_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
SQH68446.1\|1107766_1109866_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	6.6e-121	39.4
SQH68447.1\|1109923_1110667_-	virulence factor relevant regulator	NA	NA	NA	NA
SQH68448.1\|1110814_1111414_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
SQH68449.1\|1111423_1112653_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.8e-138	60.5
SQH68450.1\|1112782_1112953_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQH68451.1\|1112972_1113470_-	dihydrofolate reductase	W5QU76	Bacillus_phage	8.6e-11	34.4
SQH68452.1\|1113549_1114389_-	thymidylate synthase	U5J9N5	Bacillus_phage	1.9e-82	52.9
SQH68453.1\|1114597_1115773_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQH68454.1\|1115759_1117037_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQH68455.1\|1117266_1118256_-	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQH68456.1\|1118248_1119256_-	phosphomevalonate kinase	NA	NA	NA	NA
SQH68457.1\|1119248_1120193_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQH68458.1\|1120174_1121068_-	mevalonate kinase	NA	NA	NA	NA
SQH68459.1\|1121346_1122579_-	two component system histidine kinase	NA	NA	NA	NA
SQH68460.1\|1122587_1123256_-	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQH68461.1\|1123258_1123909_-	GTP pyrophosphokinase	NA	NA	NA	NA
SQH68462.1\|1124128_1126141_+	5'-nucleotidase	NA	NA	NA	NA
SQH68463.1\|1126222_1126633_-	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQH68464.1\|1127524_1129402_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.1e-63	31.5
SQH68465.1\|1129398_1130607_-\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	9.0e-38	45.0
SQH68466.1\|1130731_1131580_-	degV family protein	NA	NA	NA	NA
SQH68467.1\|1131579_1131960_-\|transposase	transposase	NA	NA	NA	NA
SQH68468.1\|1132187_1132364_-	nucleoside diphosphate kinase	NA	NA	NA	NA
SQH68469.1\|1132862_1133882_+\|protease	igG-degrading protease	NA	NA	NA	NA
SQH68470.1\|1134562_1134781_+\|transposase	degenerate transposase	A0A1B1P773	Bacillus_phage	2.7e-09	55.9

DBSCAN-SWA_7

1171007 : 1181610

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH68504.1\|1171007_1172150_-	aminotransferase class-V family protein	H7BUW1	unidentified_phage	7.8e-15	31.7
SQH68505.1\|1172384_1172825_+	membrane protein	NA	NA	NA	NA
SQH68506.1\|1172854_1174123_+	folylpolyglutamate synthase	NA	NA	NA	NA
SQH68507.1\|1174210_1175563_-	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-30	24.0
SQH68508.1\|1175783_1176125_-	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
SQH68509.1\|1176185_1177352_-	chorismate synthase	A0A291AU41	Pandoravirus	1.8e-38	34.4
SQH68510.1\|1177445_1178132_-	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
SQH68511.1\|1178128_1179292_-	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQH68512.1\|1179399_1181610_+	phosphoglycerol transferase	W6LM83	Streptococcus_phage	2.9e-268	69.1

DBSCAN-SWA_8

1353877 : 1411793

Bacillus_phage(18.75%)

portal,tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH68664.1\|1353877_1354330_-\|portal	portal protein	E4ZFM3	Streptococcus_phage	4.4e-62	84.9
SQH68665.1\|1354434_1354707_-	cytoplasmic protein	E4ZFM1	Streptococcus_phage	1.2e-06	48.1
SQH68666.1\|1354725_1355031_-	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA
SQH68667.1\|1355030_1355333_-	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA
SQH68668.1\|1355588_1356473_+	Uncharacterised protein	NA	NA	NA	NA
SQH68669.1\|1356472_1356697_+	Uncharacterised protein	NA	NA	NA	NA
SQH68670.1\|1356687_1357416_+	Chromosome segregation ATPase	NA	NA	NA	NA
SQH68671.1\|1357500_1358346_+	chromosome segregation ATPase	NA	NA	NA	NA
SQH68672.1\|1358335_1358545_+	vanUG2	A0A2K5B263	Erysipelothrix_phage	1.3e-16	61.5
SQH68673.1\|1358647_1359856_-	major facilitator superfamily protein	NA	NA	NA	NA
SQH68674.1\|1359940_1361098_-	UDP-glucose 6-dehydrogenase	M1GX70	Paramecium_bursaria_Chlorella_virus	1.1e-77	41.6
SQH68675.1\|1361790_1362780_-	glycosyl transferase 2 family protein	NA	NA	NA	NA
SQH68676.1\|1362834_1363803_-	serine kinase	NA	NA	NA	NA
SQH68677.1\|1363786_1364986_-	S-adenosylmethionine synthetase family protein	NA	NA	NA	NA
SQH68678.1\|1364995_1365982_-	dehydrogenase	NA	NA	NA	NA
SQH68679.1\|1365974_1366709_-	L-glutamate ligase	NA	NA	NA	NA
SQH68680.1\|1366710_1367547_-	xylose isomerase-like TIM barrel family protein	NA	NA	NA	NA
SQH68681.1\|1367543_1368416_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
SQH68682.1\|1368668_1369541_+	transcriptional regulator	NA	NA	NA	NA
SQH68683.1\|1369793_1373333_-	chromosome segregation protein SMC	NA	NA	NA	NA
SQH68684.1\|1373333_1374026_-	ribonuclease III	M4QMG4	Micromonas_pusilla_virus	6.5e-25	34.7
SQH68685.1\|1374469_1375279_-	metallo-beta-lactamase superfamily protein	A0A2H4J3R0	uncultured_Caudovirales_phage	4.8e-35	37.4
SQH68686.1\|1375282_1376635_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	4.7e-35	35.0
SQH68687.1\|1376627_1377338_-	two-component response regulator	W8CYM9	Bacillus_phage	3.7e-39	39.0
SQH68688.1\|1377499_1378495_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQH68689.1\|1378589_1379837_-	long-chain-fatty-acid--CoA ligase	NA	NA	NA	NA
SQH68690.1\|1379793_1380942_-	Acetyl-CoA acetyltransferase	NA	NA	NA	NA
SQH68691.1\|1381686_1382472_-	ABC transporter permease	NA	NA	NA	NA
SQH68692.1\|1382473_1383292_-	Daunorubicin resistance transmembrane protein	NA	NA	NA	NA
SQH68693.1\|1383293_1384286_-	antibiotic transport system ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.4e-12	27.1
SQH68694.1\|1384426_1386370_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	1.0e-120	38.7
SQH68695.1\|1386791_1388126_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
SQH68696.1\|1388127_1389126_-	glycosyltransferase	NA	NA	NA	NA
SQH68697.1\|1389256_1390258_-	Catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
SQH68698.1\|1390431_1391517_+	Xaa-Pro dipeptidase	NA	NA	NA	NA
SQH68699.1\|1391565_1392231_+	NAD(P)H nitroreductase yfkO	NA	NA	NA	NA
SQH68700.1\|1392241_1392619_+	bleomycin resistance protein	NA	NA	NA	NA
SQH68701.1\|1392763_1393690_+	glucosyl transferase family 2	V5USA4	Oenococcus_phage	2.6e-77	47.5
SQH68702.1\|1393900_1394584_+	membrane protein	NA	NA	NA	NA
SQH68703.1\|1394583_1395510_+	membrane protein	NA	NA	NA	NA
SQH68704.1\|1395559_1396207_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
SQH68705.1\|1396322_1397042_-	glutamine cyclotransferase	NA	NA	NA	NA
SQH68706.1\|1397047_1397515_-	ssrA-binding protein	W5RAM5	Staphylococcus_phage	5.7e-41	57.0
SQH68707.1\|1397517_1399851_-	ribonuclease R	Q0GXV6	Lactococcus_phage	6.7e-90	39.6
SQH68708.1\|1399944_1400181_-	preprotein translocase subunit	NA	NA	NA	NA
SQH68709.1\|1400369_1401563_-	major facilitator superfamily protein	NA	NA	NA	NA
SQH68710.1\|1401684_1403187_-	ATPase	A0A248XCZ8	Klebsiella_phage	3.3e-74	41.1
SQH68711.1\|1403376_1403970_-	dephospho-CoA kinase	NA	NA	NA	NA
SQH68712.1\|1403966_1404794_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
SQH68713.1\|1404965_1405832_-	transcriptional regulator	NA	NA	NA	NA
SQH68714.1\|1406902_1407172_+	Uncharacterised protein	NA	NA	NA	NA
SQH68715.1\|1407519_1407966_-	histidine kinase	NA	NA	NA	NA
SQH68716.1\|1408010_1409006_-	Uncharacterised protein	NA	NA	NA	NA
SQH68717.1\|1409344_1409449_-	Uncharacterised protein	NA	NA	NA	NA
SQH68718.1\|1409498_1409693_-\|bacteriocin	bacteriocin-associated protein	NA	NA	NA	NA
SQH68719.1\|1409986_1410187_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQH68720.1\|1410251_1410416_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
SQH68721.1\|1410733_1411156_+\|transposase	transposase, Mutator family protein	NA	NA	NA	NA
SQH68722.1\|1411152_1411302_+\|transposase	IS1191 transposase	NA	NA	NA	NA
SQH68723.1\|1411610_1411793_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA

DBSCAN-SWA_9

1461290 : 1467324

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQH68771.1\|1461290_1462118_+	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	1.4e-127	79.1
SQH68772.1\|1462191_1462548_-	arsenate reductase	M1PLC0	Streptococcus_phage	6.3e-40	65.8
SQH68773.1\|1462846_1463476_+	copper homeostasis protein	NA	NA	NA	NA
SQH68774.1\|1463522_1463915_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQH68775.1\|1463941_1464805_-	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	1.7e-115	75.0
SQH68776.1\|1464809_1465133_-	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQH68777.1\|1465537_1465777_-	Tpl protein	NA	NA	NA	NA
SQH68778.1\|1465795_1466671_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.7e-63	43.8
SQH68779.1\|1466688_1467324_-	thymidylate kinase	M1PSC7	Streptococcus_phage	1.2e-65	63.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483442

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection