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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS483463 Salmonella enterica subsp. enterica serovar Give strain NCTC5778 genome assembly, chromosome: 1 3 crisprs PD-DExK,DEDDh,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG,RT 0 6 10 0

Results visualization

1. LS483463
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483463_1 803619-803699 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483463_2 1003296-1003446 TypeI-E I-E
2 spacers
cas3,cas8e,cse2gr11,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483463_3 1019577-1020032 TypeI-E I-E
7 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP026280 Klebsiella oxytoca strain KONIH2 plasmid pKPC-55bf, complete sequence 146878-146912 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP041104 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH07 plasmid unnamed5, complete sequence 34808-34842 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP045219 Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence 15775-15809 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP018922 Serratia marcescens strain UMH7 plasmid unnamed5, complete sequence 4248-4282 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP045693 Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence 3800-3834 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 CP052480 Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence 3654-3688 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NC_005814 Yersinia pestis biovar Microtus str. 91001 plasmid pCRY, complete sequence 14694-14728 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP026206 Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence 37146-37180 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP022119 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence 12565-12599 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP022119 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence 18373-18407 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP026384 Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence 32128-32162 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP035200 Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence 23488-23522 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NC_010726 Klebsiella pneumoniae plasmid pMET-1, complete sequence 14665-14699 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 CP022016 Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence 265042-265076 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP045060 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence 14922-14956 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP045053 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence 14925-14959 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP045057 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence 14924-14958 0 1.0
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP048112 Klebsiella michiganensis strain BD177 plasmid unnamed6 9936-9970 1 0.971
LS483463_1 1.1|803642|35|LS483463|CRISPRCasFinder 803642-803676 35 NZ_CP019191 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence 28125-28159 1 0.971
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NZ_CP024424 Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence 112052-112083 5 0.844
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 224971-225002 5 0.844
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NZ_CP044082 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence 90792-90823 5 0.844
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NZ_CP031080 Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence 271400-271431 6 0.812
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP012477 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence 679642-679673 6 0.812
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 343727-343758 7 0.781
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 654402-654433 7 0.781
LS483463_3 3.5|1019850|32|LS483463|CRISPRCasFinder,CRT 1019850-1019881 32 NZ_CP037921 Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence 150840-150871 7 0.781
LS483463_2 2.2|1003386|32|LS483463|CRISPRCasFinder 1003386-1003417 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 2052295-2052326 8 0.75
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 MK765597 Tortoise microvirus 45 isolate 45_SP_116, complete genome 5398-5429 8 0.75
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 MK765566 Tortoise microvirus 16 isolate 16_SP_72, complete genome 5398-5429 8 0.75
LS483463_3 3.6|1019911|32|LS483463|CRISPRCasFinder,CRT 1019911-1019942 32 NZ_KM406416 Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence 52772-52803 8 0.75
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NC_021709 Alteromonas mediterranea 615 plasmid unnamed, complete sequence 120488-120519 9 0.719
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 MK765665 Tortoise microvirus 108 isolate 108_SP_3, complete genome 5472-5503 10 0.688
LS483463_3 3.7|1019972|32|LS483463|CRISPRCasFinder,CRT 1019972-1020003 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1151729-1151760 10 0.688
LS483463_3 3.7|1019972|32|LS483463|CRISPRCasFinder,CRT 1019972-1020003 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 661429-661460 10 0.688
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP034093 Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence 108478-108509 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP038645 Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence 48707-48738 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP039519 Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence 31338-31369 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 CP033517 Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence 77863-77894 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP016301 Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence 10113-10144 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP016296 Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence 10113-10144 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP016299 Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence 10113-10144 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP024125 Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence 48133-48164 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP026128 Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence 61932-61963 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP033864 Acinetobacter sp. FDAARGOS_560 plasmid unnamed2 54147-54178 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP010398 Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence 33511-33542 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP015484 Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence 39455-39486 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP018333 Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence 100882-100913 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP020585 Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence 56900-56931 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NC_023031 Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence 70372-70403 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 CP031744 Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence 39455-39486 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP050905 Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence 45349-45380 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NC_020524 Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence 39455-39486 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP021327 Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence 102928-102959 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_MK386680 Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence 96499-96530 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP018257 Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence 73224-73255 11 0.656
LS483463_3 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT 1019667-1019698 32 NZ_CP010780 Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence 17801-17832 11 0.656

1. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP026280 (Klebsiella oxytoca strain KONIH2 plasmid pKPC-55bf, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

2. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP041104 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH07 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

3. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP045219 (Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

4. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP018922 (Serratia marcescens strain UMH7 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

5. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP045693 (Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

6. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to CP052480 (Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

7. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NC_005814 (Yersinia pestis biovar Microtus str. 91001 plasmid pCRY, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

8. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP026206 (Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

9. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP022119 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

10. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP022119 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

11. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP026384 (Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

12. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP035200 (Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

13. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NC_010726 (Klebsiella pneumoniae plasmid pMET-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

14. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

15. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

16. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

17. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccacttcattatttttcgtc	Protospacer
***********************************

18. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP048112 (Klebsiella michiganensis strain BD177 plasmid unnamed6) position: , mismatch: 1, identity: 0.971

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtaccactttattatttttcgtc	Protospacer
*********************.*************

19. spacer 1.1|803642|35|LS483463|CRISPRCasFinder matches to NZ_CP019191 (Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence) position: , mismatch: 1, identity: 0.971

ttttctttccgcgtaccacttcattatttttcgtc	CRISPR spacer
ttttctttccgcgtgccacttcattatttttcgtc	Protospacer
**************.********************

20. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****. 

21. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****. 

22. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****. 

23. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****. 

24. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

--gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
gagtcg--atggctgaaacggcgcgtgagaacgg	Protospacer
  *.**  ******.********* *******.*

25. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  ** 

26. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **. 

27. spacer 3.5|1019850|32|LS483463|CRISPRCasFinder,CRT matches to NZ_CP037921 (Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

atgggcggaggcttaattggcggc--gctgccgg	CRISPR spacer
atgggcggaggcttgattcgcggcaaactgtt--	Protospacer
**************.*** *****  .***..  

28. spacer 2.2|1003386|32|LS483463|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***  

29. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to MK765597 (Tortoise microvirus 45 isolate 45_SP_116, complete genome) position: , mismatch: 8, identity: 0.75

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
gataatttggctaaatcggcgcttgagcgctg	Protospacer
* ..** ******** *********** .* *

30. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to MK765566 (Tortoise microvirus 16 isolate 16_SP_72, complete genome) position: , mismatch: 8, identity: 0.75

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
gataatttggctaaatcggcgcttgagcgctg	Protospacer
* ..** ******** *********** .* *

31. spacer 3.6|1019911|32|LS483463|CRISPRCasFinder,CRT matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 8, identity: 0.75

cagacgtagagattgagaacacaaatgactca	CRISPR spacer
cagacgtagagattgaaaaaacagaatgcaaa	Protospacer
****************.** ***.*  .*  *

32. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NC_021709 (Alteromonas mediterranea 615 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
agtgaagctgctaaaaaggcgattgagaacag	Protospacer
. .** .. ******* **** **********

33. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to MK765665 (Tortoise microvirus 108 isolate 108_SP_3, complete genome) position: , mismatch: 10, identity: 0.688

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
aataatttggctaaatcggcgcttgagcgttg	Protospacer
. ..** ******** *********** .. *

34. spacer 3.7|1019972|32|LS483463|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

35. spacer 3.7|1019972|32|LS483463|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

36. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

37. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

38. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

39. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

40. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

41. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

42. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

43. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

44. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

45. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

46. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

47. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

48. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

49. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

50. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

51. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

52. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

53. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

54. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

55. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

56. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

57. spacer 3.2|1019667|32|LS483463|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 115543 : 123243 12 Morganella_phage(66.67%) integrase attL 111381:111393|attR 123415:123427
DBSCAN-SWA_2 514557 : 572102 60 Staphylococcus_phage(12.5%) protease,transposase,integrase attL 570731:570749|attR 573871:573889
DBSCAN-SWA_3 648591 : 684698 44 Cronobacter_phage(71.43%) plate,capsid,tail,terminase,integrase attL 642657:642677|attR 690436:690456
DBSCAN-SWA_4 1183178 : 1192976 12 Enterobacteria_phage(87.5%) integrase,capsid attL 1188849:1188864|attR 1195591:1195606
DBSCAN-SWA_5 1710462 : 1719633 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_6 1786804 : 1793101 6 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_7 2212138 : 2219868 7 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) tRNA,transposase,integrase attL 2217339:2217352|attR 2222096:2222109
DBSCAN-SWA_8 2638207 : 2646478 9 Escherichia_phage(42.86%) transposase NA
DBSCAN-SWA_9 3264786 : 3323865 51 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_10 4380103 : 4414967 45 Salmonella_phage(62.5%) holin,portal,plate,capsid,tail,terminase,integrase attL 4379896:4379942|attR 4410342:4410388
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage