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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS483466 Salmonella enterica subsp. arizonae strain NCTC7307 genome assembly, chromosome: 1 0 crisprs WYL,cas3,csa3,DEDDh,DinG 0 0 22 0

Results visualization

1. LS483466
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 411702 : 445933 45 Organic_Lake_phycodnavirus(100.0%) tRNA,protease NA
DBSCAN-SWA_2 506869 : 553458 57 Streptococcus_phage(28.57%) tRNA,protease,transposase NA
DBSCAN-SWA_3 681540 : 711432 31 Bacteriophage(33.33%) integrase,transposase attL 693898:693946|attR 711646:711694
DBSCAN-SWA_4 1133393 : 1140688 7 Salmonella_phage(66.67%) tail NA
DBSCAN-SWA_5 1354211 : 1365154 16 Salmonella_phage(50.0%) tail NA
DBSCAN-SWA_6 1681101 : 1692169 12 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_7 1764458 : 1812204 44 Salmonella_phage(18.75%) integrase,tail,transposase attL 1766560:1766573|attR 1810102:1810198
DBSCAN-SWA_8 1856323 : 1886997 55 Salmonella_phage(47.37%) holin,tail,integrase attL 1854572:1854586|attR 1857362:1857376
DBSCAN-SWA_9 1893272 : 1899368 11 Escherichia_phage(62.5%) tail NA
DBSCAN-SWA_10 1973109 : 2013796 49 Moraxella_phage(28.57%) tail,protease NA
DBSCAN-SWA_11 2123524 : 2158609 43 Shigella_phage(50.0%) tRNA,protease,transposase NA
DBSCAN-SWA_12 2351455 : 2362322 11 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_13 2495999 : 2505362 16 Escherichia_phage(33.33%) tRNA,integrase attL 2489156:2489167|attR 2506098:2506109
DBSCAN-SWA_14 2761755 : 2766460 7 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_15 2844163 : 2859056 12 Escherichia_phage(25.0%) tRNA NA
DBSCAN-SWA_16 2865294 : 2871683 6 Agrobacterium_phage(16.67%) protease NA
DBSCAN-SWA_17 3461348 : 3472531 12 Enterobacteria_phage(88.89%) capsid,integrase attL 3461053:3461068|attR 3472700:3472715
DBSCAN-SWA_18 3874491 : 3923808 61 Shigella_phage(27.27%) tRNA,integrase,transposase attL 3890081:3890106|attR 3928424:3928449
DBSCAN-SWA_19 3959111 : 3962398 6 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_20 4086205 : 4090712 6 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_21 4502843 : 4508955 7 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_22 4565843 : 4573520 9 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage