CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483481	Salmonella enterica subsp. enterica serovar Bredeney strain NCTC6026 genome assembly, chromosome: 1	2 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,DEDDh,DinG	0	29	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483481_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483481_1

924665-925974

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTNTTCCCCGCGCCAGCGGGGATAAACCG	CRT

21 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of LS483481_1

>merge|LS483481|1|924665-925974|PILER-CR,CRISPRCasFinder,CRT
GTATTCCCCGCGCCAGCGGGGATAAACCGCCCGGTTTTACCGCCAACACTCACTATATTGTGTATTCCCCGCGCCAGCGGGGATAAACCGCGGCTCGACCGGGAGCTTGCCGGCATCGTGGAGTATTCCCCGCGCCAGCGGGGATAAACCGCAATCATCTGATTTTTTATCATTGAGAGATATGTATTCCCCGCGCCAGCGGGGATAAACCGGCAACTTCTTATATGTAAAAAACCGTTATGATGTATTCCCCGCGCCAGCGGGGATAAACCGTCCGGGGAAAGAACTCGCCTCGTCCAGCGTCAGTATTCCCCGCGCCAGCGGGGATAAACCGGCAATATGAATAACAACGTACCACTCATCGCAGTATTCCCCGCGCCAGCGGGGATAAACCGGAGCACTTTTACTGTAGGACTTGTATGAATCTGTATTCCCCGCGCCAGCGGGGATAAACCGCGGCCGTAGCGCCGCTCAGTCCGGGGGATGGTGTATTCCCCGCACCAGCGGGGATAAACCGCAATTGCGTTCTTGCTTATGCCCAGCGACTTAGTGTTCCCCGCGTCAGCGGGGATAAACCGATTTCAAACACTCCGGGTCTGCCAGCGCCTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCGGCGGACGCCGCTCAGATAGCCAAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTATACAGGATTCTCACACTTTGGTTTGGTCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTTTTTTATTTGTACTATTGTCAGTACCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGAAACAAACAAAGTTTTGCGCGATTCCACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCACCAGGTAACAATATCGTCCCCGACCTTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAAATTCCCCAGATACCGCGCATCGGCACTGTGTTCCCCGCGTCAGCGGGGATAAACCGCAAAATTAATGTCCAGGACCTTATTAAGTTACGTGTTCCCCGCGTCAGCGGGGATAAACCGCTCGGGGATTTTGTGCCACCCAAAACGCTCGCGTGTTCCCCGCGTCAGCGGGGATAAACCGTTGCCACAACCACAATGGATCAGGAGCAATTAGTGTTCCCCGCGTCAGCGGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCTAGCGGGGATAAACCGCCGGATGAAAACGCCTACCCGGAAGACTACGAGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>LS483481|1|1|924665-925913|PILER-CR
GTATTCCCCGCGCCAGCGGGGATAAACCG	CCCGGTTTTACCGCCAACACTCACTATATTGT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCTCGACCGGGAGCTTGCCGGCATCGTGGA
GTATTCCCCGCGCCAGCGGGGATAAACCG	CAATCATCTGATTTTTTATCATTGAGAGATAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTCTTATATGTAAAAAACCGTTATGAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGGAAAGAACTCGCCTCGTCCAGCGTCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAATATGAATAACAACGTACCACTCATCGCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GAGCACTTTTACTGTAGGACTTGTATGAATCT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCCGTAGCGCCGCTCAGTCCGGGGGATGGT
GTATTCCCCGCACCAGCGGGGATAAACCG	CAATTGCGTTCTTGCTTATGCCCAGCGACTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATTTCAAACACTCCGGGTCTGCCAGCGCCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGCGGACGCCGCTCAGATAGCCAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATACAGGATTCTCACACTTTGGTTTGGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTTTTTATTTGTACTATTGTCAGTACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAAACAAACAAAGTTTTGCGCGATTCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCAGGTAACAATATCGTCCCCGACCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAATTCCCCAGATACCGCGCATCGGCACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAATTAATGTCCAGGACCTTATTAAGTTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTCGGGGATTTTGTGCCACCCAAAACGCTCGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCCACAACCACAATGGATCAGGAGCAATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCTAGCGGGGATAAACCG

>LS483481|1|1|924665-925974|CRISPRCasFinder
GTATTCCCCGCGCCAGCGGGGATAAACCG	CCCGGTTTTACCGCCAACACTCACTATATTGT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCTCGACCGGGAGCTTGCCGGCATCGTGGA
GTATTCCCCGCGCCAGCGGGGATAAACCG	CAATCATCTGATTTTTTATCATTGAGAGATAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTCTTATATGTAAAAAACCGTTATGAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGGAAAGAACTCGCCTCGTCCAGCGTCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAATATGAATAACAACGTACCACTCATCGCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GAGCACTTTTACTGTAGGACTTGTATGAATCT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCCGTAGCGCCGCTCAGTCCGGGGGATGGT
GTATTCCCCGCACCAGCGGGGATAAACCG	CAATTGCGTTCTTGCTTATGCCCAGCGACTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATTTCAAACACTCCGGGTCTGCCAGCGCCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGCGGACGCCGCTCAGATAGCCAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATACAGGATTCTCACACTTTGGTTTGGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTTTTTATTTGTACTATTGTCAGTACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAAACAAACAAAGTTTTGCGCGATTCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCAGGTAACAATATCGTCCCCGACCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAATTCCCCAGATACCGCGCATCGGCACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAATTAATGTCCAGGACCTTATTAAGTTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTCGGGGATTTTGTGCCACCCAAAACGCTCGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCCACAACCACAATGGATCAGGAGCAATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGGATGAAAACGCCTACCCGGAAGACTACGA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>LS483481|1|1|924665-925974|CRT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CCCGGTTTTACCGCCAACACTCACTATATTGT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCTCGACCGGGAGCTTGCCGGCATCGTGGA
GTATTCCCCGCGCCAGCGGGGATAAACCG	CAATCATCTGATTTTTTATCATTGAGAGATAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTCTTATATGTAAAAAACCGTTATGAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGGAAAGAACTCGCCTCGTCCAGCGTCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAATATGAATAACAACGTACCACTCATCGCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GAGCACTTTTACTGTAGGACTTGTATGAATCT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCCGTAGCGCCGCTCAGTCCGGGGGATGGT
GTATTCCCCGCACCAGCGGGGATAAACCG	CAATTGCGTTCTTGCTTATGCCCAGCGACTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATTTCAAACACTCCGGGTCTGCCAGCGCCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGCGGACGCCGCTCAGATAGCCAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATACAGGATTCTCACACTTTGGTTTGGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTTTTTATTTGTACTATTGTCAGTACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAAACAAACAAAGTTTTGCGCGATTCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCAGGTAACAATATCGTCCCCGACCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAATTCCCCAGATACCGCGCATCGGCACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAATTAATGTCCAGGACCTTATTAAGTTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTCGGGGATTTTGTGCCACCCAAAACGCTCGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCCACAACCACAATGGATCAGGAGCAATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGGATGAAAACGCCTACCCGGAAGACTACGA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
LS483481.1\|SQI80328.1\|931340_932075_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483481.1\|SQI80276.1\|911648_914405_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	unknown	unknown	gnl\|CDD\|236848
LS483481.1\|SQI80315.1\|924398_924545_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483481.1\|SQI80333.1\|936760_938296_+\|CRISPR-associated-protein-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483481.1\|SQI80279.1\|914462_915758_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	gnl\|CDD\|237291
LS483481.1\|SQI80322.1\|927753_929553_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LS483481.1\|SQI80335.1\|938937_939996_+\|CRISPR-associated-protein,-Cse4-family	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LS483481.1\|SQI80313.1\|923696_924368_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LS483481.1\|SQI80332.1\|933499_936199_-\|helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LS483481.1\|SQI80305.1\|920542_922180_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LS483481.1\|SQI80297.1\|918450_918747_+\|ParE-toxin-protein	unknown	unknown	gnl\|CDD\|226194
LS483481.1\|SQI80319.1\|926956_927319_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LS483481.1\|SQI80285.1\|918197_918485_+\|putative-transcriptional-regulators-containing-the-CopG/Arc/MetJ-DNA-binding-domain-and-a-metal-binding-domain	unknown	unknown	gnl\|CDD\|226136
LS483481.1\|SQI80283.1\|915809_918044_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LS483481.1\|SQI80317.1\|926071_926869_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LS483481.1\|SQI80304.1\|919514_920315_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LS483481.1\|SQI80334.1\|938312_938915_+\|CRISPR-associated-protein-Cse2-family	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
LS483481.1\|SQI80306.1\|922262_923561_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483481.1\|SQI80331.1\|932162_933116_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483481.1\|SQI80324.1\|929552_931265_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
LS483481.1\|SQI80328.1\|931340_932075_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.66828e-138
LS483481.1\|SQI80276.1\|911648_914405_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
LS483481.1\|SQI80324.1\|929552_931265_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483481.1\|SQI80333.1\|936760_938296_+\|CRISPR-associated-protein-Cse1-family	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
LS483481.1\|SQI80279.1\|914462_915758_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LS483481.1\|SQI80322.1\|927753_929553_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LS483481.1\|SQI80335.1\|938937_939996_+\|CRISPR-associated-protein,-Cse4-family	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.62968e-122
LS483481.1\|SQI80313.1\|923696_924368_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.27998e-154
LS483481.1\|SQI80332.1\|933499_936199_-\|helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.32798e-141
LS483481.1\|SQI80305.1\|920542_922180_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LS483481.1\|SQI80297.1\|918450_918747_+\|ParE-toxin-protein	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	4.79136e-12
LS483481.1\|SQI80319.1\|926956_927319_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LS483481.1\|SQI80285.1\|918197_918485_+\|putative-transcriptional-regulators-containing-the-CopG/Arc/MetJ-DNA-binding-domain-and-a-metal-binding-domain	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	4.75155e-18
LS483481.1\|SQI80283.1\|915809_918044_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LS483481.1\|SQI80317.1\|926071_926869_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.51648e-102
LS483481.1\|SQI80304.1\|919514_920315_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
LS483481.1\|SQI80334.1\|938312_938915_+\|CRISPR-associated-protein-Cse2-family	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.9872e-37
LS483481.1\|SQI80306.1\|922262_923561_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483481.1\|SQI80331.1\|932162_933116_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0

>LS483481.1|SQI80315.1|924398_924545_+|Uncharacterised-protein
MPSVSHPLPRLVYFLYVNFDECIKALINFSIAMHGSRYFGKFKEKIIL
>LS483481.1|SQI80313.1|923696_924368_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQDYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483481.1|SQI80306.1|922262_923561_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LS483481.1|SQI80305.1|920542_922180_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>LS483481.1|SQI80304.1|919514_920315_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LS483481.1|SQI80297.1|918450_918747_+|ParE-toxin-protein
MRTVKLTPKASEDLENIWHYGWLYFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFERHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>LS483481.1|SQI80285.1|918197_918485_+|putative-transcriptional-regulators-containing-the-CopG/Arc/MetJ-DNA-binding-domain-and-a-metal-binding-domain
MARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>LS483481.1|SQI80283.1|915809_918044_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>LS483481.1|SQI80279.1|914462_915758_+|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAVLLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMIARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>LS483481.1|SQI80276.1|911648_914405_-|BarA-sensory-histidine-kinase-(VarS-/-GacS)
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>LS483481.1|SQI80317.1|926071_926869_+|beta-lactamase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDDSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKQIYALIGGFHLRCASPFTMWRVRRFLQEQKPEKLCGCHCTGVWGRLWLPEITAPATGDVLRF
>LS483481.1|SQI80319.1|926956_927319_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LS483481.1|SQI80322.1|927753_929553_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMLGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRVPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>LS483481.1|SQI80324.1|929552_931265_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LS483481.1|SQI80328.1|931340_932075_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483481.1|SQI80331.1|932162_933116_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTMISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTSNAQIKVAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLT
>LS483481.1|SQI80332.1|933499_936199_-|helicase-Cas3
MTQMEYLNYLRYWGKTNKSNKDITPPYHLLAYHCLDVAACGYYIIKNNIFDSRSILEKCGIIGTNAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSYYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQQKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKRFGLVG
>LS483481.1|SQI80333.1|936760_938296_+|CRISPR-associated-protein-Cse1-family
MNLITEKWLPVIFSSGEKTRISLRDLLDNRIQDLAYPRPDFQGAAWQMLIGILQCTIAPEDKEEWADIWHDGIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNTLKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNSHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNNMSLWCFAFDMDNAKARCWYQHRIPLISVSHEEQFLAALNTVLVLASEALSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>LS483481.1|SQI80334.1|938312_938915_+|CRISPR-associated-protein-Cse2-family
MLNSNTAALCRILHPDAQKALLDWFATLSERYERKDGKRVNGRVWRAELKRMAPPYGVMICEGYDALRQTLLKHMRLQPLDEMALALFVSVAVHIKSHKENISFAAQLGEKLNGSTPCVSVLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRTPFERNRIRWANEYLSTSRGK
>LS483481.1|SQI80335.1|938937_939996_+|CRISPR-associated-protein,-Cse4-family
MTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIAAGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ

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Crispr_ID: LS483481_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483481_2

942733-943676

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

15 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LS483481_2

>merge|LS483481|2|942733-943676|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAAACATCCGATCAAATACTGCGTTCGTTTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTATTTTTGAACTGGCCAGCGCCACCGATGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTACGCGGGCGTCTGTTAAAGAGTCCTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGGGGTTTCCCAGAGGCATTCTGATGAAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATGCAGATGCCTCCCGTACTGCCGCCGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTGGCCCTTAGATAACGGGAGATCAAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCATAACCTTCGCTACCACACTTGCCGGTACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTGAGGTTAGGGGAGTCAGGAAATTGCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGACAAAATCGGCGGCCCAATCGCCGGCGCTGACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCTGCCGTCTTTTTATTGAGGTCTGTAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCTTAATCATTTTGTTTAAATCCCGGATCACCTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGTTATTGTCACTCGTCAGTGATAATTTTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCGTTGAAGATCTGGACGCATGGGGCAAAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAGCTCGGTTTTAATTTCGTCGCTAAGGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAGGCCGACAGTGTGTACACCTCTAAAAAGTGTTCCCCGCGTCAGCGGGGATAAACAC

>LS483481|2|2|942733-943675|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAACATCCGATCAAATACTGCGTTCGTTTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTATTTTTGAACTGGCCAGCGCCACCGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGTTACGCGGGCGTCTGTTAAAGAGTCCTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCCGGGGTTTCCCAGAGGCATTCTGATGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAATGCAGATGCCTCCCGTACTGCCGCCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGATTGGCCCTTAGATAACGGGAGATCAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATAACCTTCGCTACCACACTTGCCGGTACTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCTTGAGGTTAGGGGAGTCAGGAAATTGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACAAAATCGGCGGCCCAATCGCCGGCGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCCTGCCGTCTTTTTATTGAGGTCTGTAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TTAATCATTTTGTTTAAATCCCGGATCACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGTTATTGTCACTCGTCAGTGATAATTTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCCGTTGAAGATCTGGACGCATGGGGCAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGAGCTCGGTTTTAATTTCGTCGCTAAGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAAAAGGCCGACAGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACA

>LS483481|2|2|942733-943676|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACATCCGATCAAATACTGCGTTCGTTTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTATTTTTGAACTGGCCAGCGCCACCGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTACGCGGGCGTCTGTTAAAGAGTCCTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGGGGTTTCCCAGAGGCATTCTGATGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATGCAGATGCCTCCCGTACTGCCGCCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTGGCCCTTAGATAACGGGAGATCAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAACCTTCGCTACCACACTTGCCGGTACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGAGGTTAGGGGAGTCAGGAAATTGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAATCGGCGGCCCAATCGCCGGCGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGCCGTCTTTTTATTGAGGTCTGTAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TAATCATTTTGTTTAAATCCCGGATCACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTTATTGTCACTCGTCAGTGATAATTTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTTGAAGATCTGGACGCATGGGGCAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGCTCGGTTTTAATTTCGTCGCTAAGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAGGCCGACAGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>LS483481|2|2|942733-943676|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACATCCGATCAAATACTGCGTTCGTTTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTATTTTTGAACTGGCCAGCGCCACCGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTACGCGGGCGTCTGTTAAAGAGTCCTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGGGGTTTCCCAGAGGCATTCTGATGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATGCAGATGCCTCCCGTACTGCCGCCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTGGCCCTTAGATAACGGGAGATCAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAACCTTCGCTACCACACTTGCCGGTACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGAGGTTAGGGGAGTCAGGAAATTGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAATCGGCGGCCCAATCGCCGGCGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGCCGTCTTTTTATTGAGGTCTGTAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TAATCATTTTGTTTAAATCCCGGATCACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTTATTGTCACTCGTCAGTGATAATTTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTTGAAGATCTGGACGCATGGGGCAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGCTCGGTTTTAATTTCGTCGCTAAGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAGGCCGACAGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483481.1\|SQI80336.1\|940005_940731_+\|CRISPR-associated-protein-Cas5	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
LS483481.1\|SQI80328.1\|931340_932075_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483481.1\|SQI80332.1\|933499_936199_-\|helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LS483481.1\|SQI80341.1\|944987_945896_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LS483481.1\|SQI80337.1\|940730_941438_+\|CRISPR-associated-protein,-Cse3-family-protein	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
LS483481.1\|SQI80358.1\|948501_948813_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LS483481.1\|SQI80340.1\|943690_944737_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LS483481.1\|SQI80365.1\|950017_951067_+\|tRNA-pseudouridine-13-synthase	unknown	unknown	gnl\|CDD\|234884
LS483481.1\|SQI80354.1\|947331_947937_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LS483481.1\|SQI80339.1\|942354_942648_+\|putative-ssRNA-endonuclease	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
LS483481.1\|SQI80367.1\|951047_951809_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LS483481.1\|SQI80352.1\|945905_947345_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LS483481.1\|SQI80356.1\|947987_948311_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LS483481.1\|SQI80331.1\|932162_933116_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483481.1\|SQI80361.1\|948831_949542_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LS483481.1\|SQI80363.1\|949541_950021_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LS483481.1\|SQI80338.1\|941434_942352_+\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LS483481.1\|SQI80334.1\|938312_938915_+\|CRISPR-associated-protein-Cse2-family	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
LS483481.1\|SQI80333.1\|936760_938296_+\|CRISPR-associated-protein-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483481.1\|SQI80335.1\|938937_939996_+\|CRISPR-associated-protein,-Cse4-family	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153

Protein	Function_ID	Function_description	E-value
LS483481.1\|SQI80336.1\|940005_940731_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38262e-47
LS483481.1\|SQI80328.1\|931340_932075_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.66828e-138
LS483481.1\|SQI80332.1\|933499_936199_-\|helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.32798e-141
LS483481.1\|SQI80341.1\|944987_945896_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483481.1\|SQI80337.1\|940730_941438_+\|CRISPR-associated-protein,-Cse3-family-protein	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.13186e-88
LS483481.1\|SQI80358.1\|948501_948813_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
LS483481.1\|SQI80340.1\|943690_944737_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LS483481.1\|SQI80365.1\|950017_951067_+\|tRNA-pseudouridine-13-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LS483481.1\|SQI80354.1\|947331_947937_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
LS483481.1\|SQI80339.1\|942354_942648_+\|putative-ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.59475e-65
LS483481.1\|SQI80367.1\|951047_951809_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
LS483481.1\|SQI80352.1\|945905_947345_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483481.1\|SQI80356.1\|947987_948311_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
LS483481.1\|SQI80331.1\|932162_933116_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483481.1\|SQI80361.1\|948831_949542_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
LS483481.1\|SQI80363.1\|949541_950021_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
LS483481.1\|SQI80338.1\|941434_942352_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.48412e-156
LS483481.1\|SQI80334.1\|938312_938915_+\|CRISPR-associated-protein-Cse2-family	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.9872e-37
LS483481.1\|SQI80333.1\|936760_938296_+\|CRISPR-associated-protein-Cse1-family	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
LS483481.1\|SQI80335.1\|938937_939996_+\|CRISPR-associated-protein,-Cse4-family	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.62968e-122

>LS483481.1|SQI80339.1|942354_942648_+|putative-ssRNA-endonuclease
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGENRRIPVDLDGLRLVSFLPVENQ
>LS483481.1|SQI80338.1|941434_942352_+|CRISPR-associated-protein-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWLGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAEGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>LS483481.1|SQI80337.1|940730_941438_+|CRISPR-associated-protein,-Cse3-family-protein
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLSQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQYRFVRKDQQKPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKRR
>LS483481.1|SQI80336.1|940005_940731_+|CRISPR-associated-protein-Cas5
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>LS483481.1|SQI80335.1|938937_939996_+|CRISPR-associated-protein,-Cse4-family
MTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIAAGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>LS483481.1|SQI80334.1|938312_938915_+|CRISPR-associated-protein-Cse2-family
MLNSNTAALCRILHPDAQKALLDWFATLSERYERKDGKRVNGRVWRAELKRMAPPYGVMICEGYDALRQTLLKHMRLQPLDEMALALFVSVAVHIKSHKENISFAAQLGEKLNGSTPCVSVLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRTPFERNRIRWANEYLSTSRGK
>LS483481.1|SQI80333.1|936760_938296_+|CRISPR-associated-protein-Cse1-family
MNLITEKWLPVIFSSGEKTRISLRDLLDNRIQDLAYPRPDFQGAAWQMLIGILQCTIAPEDKEEWADIWHDGIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNTLKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNSHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNNMSLWCFAFDMDNAKARCWYQHRIPLISVSHEEQFLAALNTVLVLASEALSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>LS483481.1|SQI80332.1|933499_936199_-|helicase-Cas3
MTQMEYLNYLRYWGKTNKSNKDITPPYHLLAYHCLDVAACGYYIIKNNIFDSRSILEKCGIIGTNAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSYYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQQKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKRFGLVG
>LS483481.1|SQI80331.1|932162_933116_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTMISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTSNAQIKVAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLT
>LS483481.1|SQI80328.1|931340_932075_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483481.1|SQI80340.1|943690_944737_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>LS483481.1|SQI80341.1|944987_945896_+|Sulfate-adenylyltransferase-subunit-2-1
MEQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LS483481.1|SQI80352.1|945905_947345_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LS483481.1|SQI80354.1|947331_947937_+|adenosine-5-phosphosulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>LS483481.1|SQI80356.1|947987_948311_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LS483481.1|SQI80358.1|948501_948813_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>LS483481.1|SQI80361.1|948831_949542_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>LS483481.1|SQI80363.1|949541_950021_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>LS483481.1|SQI80365.1|950017_951067_+|tRNA-pseudouridine-13-synthase
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>LS483481.1|SQI80367.1|951047_951809_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483481_2	2.1\|942761\|33\|LS483481\|PILER-CR	942761-942793	33	NC_010392	Phage Gifsy-1, complete genome	47888-47920	0	1.0
LS483481_2	2.5\|943005\|33\|LS483481\|PILER-CR	943005-943037	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	65911-65943	0	1.0
LS483481_2	2.5\|943005\|33\|LS483481\|PILER-CR	943005-943037	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	87247-87279	0	1.0
LS483481_2	2.5\|943005\|33\|LS483481\|PILER-CR	943005-943037	33	NC_010391	Salmonella phage Fels-1, complete genome	37115-37147	0	1.0
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	515-547	0	1.0
LS483481_2	2.12\|943432\|33\|LS483481\|PILER-CR	943432-943464	33	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	5506-5538	0	1.0
LS483481_2	2.16\|942762\|32\|LS483481\|CRISPRCasFinder,CRT	942762-942793	32	NC_010392	Phage Gifsy-1, complete genome	47888-47919	0	1.0
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	65912-65943	0	1.0
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	87247-87278	0	1.0
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NC_010391	Salmonella phage Fels-1, complete genome	37116-37147	0	1.0
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	515-546	0	1.0
LS483481_2	2.27\|943433\|32\|LS483481\|CRISPRCasFinder,CRT	943433-943464	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	95-126	0	1.0
LS483481_2	2.27\|943433\|32\|LS483481\|CRISPRCasFinder,CRT	943433-943464	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	2585-2616	0	1.0
LS483481_2	2.27\|943433\|32\|LS483481\|CRISPRCasFinder,CRT	943433-943464	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	105065-105096	0	1.0
LS483481_2	2.27\|943433\|32\|LS483481\|CRISPRCasFinder,CRT	943433-943464	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	5506-5537	0	1.0
LS483481_1	1.9\|925182\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925182-925213	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	50515-50546	1	0.969
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NC_010392	Phage Gifsy-1, complete genome	21497-21529	1	0.97
LS483481_2	2.5\|943005\|33\|LS483481\|PILER-CR	943005-943037	33	NC_010393	Phage Gifsy-2, complete genome	38914-38946	1	0.97
LS483481_2	2.6\|943066\|33\|LS483481\|PILER-CR	943066-943098	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	28846-28878	1	0.97
LS483481_2	2.9\|943249\|33\|LS483481\|PILER-CR	943249-943281	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	32069-32101	1	0.97
LS483481_2	2.12\|943432\|33\|LS483481\|PILER-CR	943432-943464	33	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	94-126	1	0.97
LS483481_2	2.12\|943432\|33\|LS483481\|PILER-CR	943432-943464	33	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	2584-2616	1	0.97
LS483481_2	2.12\|943432\|33\|LS483481\|PILER-CR	943432-943464	33	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	105065-105097	1	0.97
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NC_010392	Phage Gifsy-1, complete genome	21497-21528	1	0.969
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NC_010393	Phage Gifsy-2, complete genome	38915-38946	1	0.969
LS483481_2	2.21\|943067\|32\|LS483481\|CRISPRCasFinder,CRT	943067-943098	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	28847-28878	1	0.969
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	32069-32100	1	0.969
LS483481_2	2.2\|942822\|33\|LS483481\|PILER-CR	942822-942854	33	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	2256-2288	2	0.939
LS483481_2	2.5\|943005\|33\|LS483481\|PILER-CR	943005-943037	33	NC_010392	Phage Gifsy-1, complete genome	7891-7923	2	0.939
LS483481_2	2.5\|943005\|33\|LS483481\|PILER-CR	943005-943037	33	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	9101-9133	2	0.939
LS483481_2	2.17\|942823\|32\|LS483481\|CRISPRCasFinder,CRT	942823-942854	32	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	2256-2287	2	0.938
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NC_010392	Phage Gifsy-1, complete genome	7891-7922	2	0.938
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	9101-9132	2	0.938
LS483481_2	2.3\|942883\|33\|LS483481\|PILER-CR	942883-942915	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	35847-35879	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_KP987215	Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence	70790-70822	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP029733	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence	37641-37673	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP035635	Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence	62133-62165	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP030079	Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence	45128-45160	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP038468	Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence	85530-85562	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP024681	Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence	103609-103641	3	0.909
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP022492	Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence	90997-91029	3	0.909
LS483481_2	2.12\|943432\|33\|LS483481\|PILER-CR	943432-943464	33	NZ_CP014707	Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence	36455-36487	3	0.909
LS483481_2	2.18\|942884\|32\|LS483481\|CRISPRCasFinder,CRT	942884-942915	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	35847-35878	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_KP987215	Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence	70790-70821	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP029733	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence	37642-37673	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP035635	Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence	62133-62164	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP030079	Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence	45128-45159	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP038468	Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence	85530-85561	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP024681	Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence	103610-103641	3	0.906
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP022492	Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence	90998-91029	3	0.906
LS483481_2	2.27\|943433\|32\|LS483481\|CRISPRCasFinder,CRT	943433-943464	32	NZ_CP014707	Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence	36455-36486	3	0.906
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	9205-9237	4	0.879
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	280926-280958	4	0.879
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	9212-9244	4	0.879
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	9215-9247	4	0.879
LS483481_2	2.4\|942944\|33\|LS483481\|PILER-CR	942944-942976	33	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	9215-9247	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	19008-19040	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	19008-19040	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	84372-84404	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	63167-63199	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	NZ_MG825379	Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence	85305-85337	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	86223-86255	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	35260-35292	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	35685-35717	4	0.879
LS483481_2	2.10\|943310\|33\|LS483481\|PILER-CR	943310-943342	33	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	112673-112705	4	0.879
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	9205-9236	4	0.875
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	280926-280957	4	0.875
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	9212-9243	4	0.875
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	9215-9246	4	0.875
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	9215-9246	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	35260-35291	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	19009-19040	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	19009-19040	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	84373-84404	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	35685-35716	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	63168-63199	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	112673-112704	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	NZ_MG825379	Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence	85306-85337	4	0.875
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	86224-86255	4	0.875
LS483481_1	1.10\|925243\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925243-925274	32	MH001450	Mycobacterium phage Jeon, complete genome	52496-52527	6	0.812
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	282027-282058	7	0.781
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	277006-277037	7	0.781
LS483481_1	1.3\|924816\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924816-924847	32	MN694526	Marine virus AFVG_250M936, complete genome	19637-19668	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	18540-18571	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP021139	Sulfuriferula sp. AH1 plasmid unnamed, complete sequence	34949-34980	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	713509-713540	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1958338-1958369	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1607565-1607596	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1733499-1733530	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1309026-1309057	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1322594-1322625	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1412851-1412882	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1412851-1412882	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1412851-1412882	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1412054-1412085	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	738218-738249	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1412850-1412881	7	0.781
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1446945-1446976	7	0.781
LS483481_2	2.27\|943433\|32\|LS483481\|CRISPRCasFinder,CRT	943433-943464	32	NZ_CP044178	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1	11447-11478	7	0.781
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	16478-16509	8	0.75
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	16478-16509	8	0.75
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	242615-242646	8	0.75
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	224573-224604	8	0.75
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP054026	Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence	285767-285798	8	0.75
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	494228-494259	8	0.75
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	267700-267731	8	0.75
LS483481_1	1.8\|925121\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925121-925152	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	701316-701347	8	0.75
LS483481_1	1.9\|925182\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925182-925213	32	NZ_CP028385	Providencia heimbachae strain 99101 plasmid unnamed, complete sequence	46735-46766	8	0.75
LS483481_2	2.9\|943249\|33\|LS483481\|PILER-CR	943249-943281	33	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	18540-18572	8	0.758
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP050076	Enterobacter kobei strain 070 plasmid p070_B, complete sequence	2769-2800	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP041049	Citrobacter sp. CF971 plasmid pBM527-3, complete sequence	2001-2032	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP022300	Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence	1471-1502	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_KX912255	Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence	23292-23323	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_KX863568	Citrobacter freundii strain AtetA plasmid pLNU-11, complete sequence	34497-34528	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_022346	Pseudomonas aeruginosa strain ST308 plasmid pCOL-1, complete sequence	6722-6753	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	LC486677	Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence	27530-27561	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_KU578314	Pseudomonas aeruginosa strain 10265 plasmid p10265-KPC, complete sequence	37605-37636	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_KR014106	Aeromonas hydrophila strain WCHAH01 plasmid pKPC2, complete sequence	39677-39708	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	MN539620	Citrobacter sp. strain 172116965 plasmid p116965-KPC, complete sequence	38679-38710	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_007100	Pseudomonas aeruginosa plasmid Rms149, complete sequence	112-143	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	MN436715	Klebsiella pneumoniae strain NMI4661/17 plasmid pKRA-GES-5, complete sequence	14017-14048	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	LC155906	Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507	2656-2687	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP027855	Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-3, complete sequence	1966-1997	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP038596	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.1, complete sequence	12810-12841	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_AP019194	Aeromonas hydrophila strain GSH8-2 plasmid pGSH8-2, complete sequence	37837-37868	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	KM659090	Achromobacter sp. LM16 plasmid pLM16A1, complete sequence	2611-2642	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_AP019197	Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-2, complete sequence	52395-52426	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	DQ839391	Uncultured bacterium plasmid pRSB105, complete sequence	18510-18541	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	MK050973	Citrobacter freundii plasmid pCRE12-KPC, complete sequence	30111-30142	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP028566	Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 plasmid pKPC2_045096, complete sequence	37642-37673	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP019671	Burkholderia cenocepacia strain VC12308 plasmid unnamed, complete sequence	16427-16458	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP018968	Escherichia coli strain Ecol_542 plasmid pEC542_KPC, complete sequence	10052-10083	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_LS998784	Pseudomonas aeruginosa isolate 1 plasmid 2, complete sequence	22863-22894	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP026224	Aeromonas sp. ASNIH3 plasmid pKPC-cd17, complete sequence	34896-34927	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	MN477223	Enterobacter cloacae strain 30860 plasmid p30860-KPC, complete sequence	37679-37710	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP040685	Pseudomonas aeruginosa strain C79 plasmid p1, complete sequence	2881-2912	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_019267	Serratia marcescens plasmid pRIO-5, complete sequence	3873-3904	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_011604	Salmonella enterica subsp. enterica serovar Westhampton plasmid pWES-1, complete sequence	9118-9149	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_005909	Pseudomonas alcaligenes plasmid pRA2, complete sequence	19963-19994	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP026703	Serratia marcescens strain AR_0027 plasmid unitig_1_pilon, complete sequence	10311-10342	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_LT992437	Citrobacter freundii isolate CF121SC21 plasmid 1, complete sequence	38852-38883	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MH909348	Klebsiella pneumoniae strain A1705 plasmid pA1705-KPC, complete sequence	40721-40752	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MH909350	Klebsiella pneumoniae strain A1706 plasmid pA1706-KPC, complete sequence	17232-17263	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MF497782	Morganella morganii strain Mmo-37590cz plasmid pMMO-37590cz, complete sequence	536-567	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MH624130	Aeromonas taiwanensis strain L186 plasmid p186-KPC, complete sequence	2824-2855	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MH919378	Citrobacter braakii strain CRE3 plasmid pCRE3-KPC, complete sequence	35841-35872	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP032895	Enterobacter kobei strain WCHEK045523 plasmid pKPC2_045523, complete sequence	41791-41822	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MF168945	Pseudomonas aeruginosa strain FFUP_PS_35 plasmid pJB35, complete sequence	21390-21421	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MG558000	Citrobacter freundii strain Cfr-33795cz plasmid pCfr-33795cz, complete sequence	536-567	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_047756	Caulobacter phage Sansa, complete genome	24638-24669	8	0.75
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	466363-466394	8	0.75
LS483481_1	1.1\|924694\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924694-924725	32	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	364322-364353	9	0.719
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	40929-40960	9	0.719
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	157802-157833	9	0.719
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	179339-179370	9	0.719
LS483481_1	1.11\|925304\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925304-925335	32	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	79853-79884	9	0.719
LS483481_1	1.13\|925426\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925426-925457	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	1340-1371	9	0.719
LS483481_1	1.13\|925426\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925426-925457	32	KX156762	Staphylococcus phage vB_SauS_IMEP5, complete genome	15936-15967	9	0.719
LS483481_1	1.21\|925914\|32\|LS483481\|CRISPRCasFinder,CRT	925914-925945	32	NC_047851	Brevibacterium phage LuckyBarnes, complete genome	31262-31293	9	0.719
LS483481_2	2.2\|942822\|33\|LS483481\|PILER-CR	942822-942854	33	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	59147-59179	9	0.727
LS483481_2	2.9\|943249\|33\|LS483481\|PILER-CR	943249-943281	33	NC_047756	Caulobacter phage Sansa, complete genome	24637-24669	9	0.727
LS483481_2	2.17\|942823\|32\|LS483481\|CRISPRCasFinder,CRT	942823-942854	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	59147-59178	9	0.719
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP012988	Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence	126334-126365	9	0.719
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP045676	Klebsiella pneumoniae strain WSD411 plasmid pWSD411_3, complete sequence	47101-47132	9	0.719
LS483481_2	2.19\|942945\|32\|LS483481\|CRISPRCasFinder,CRT	942945-942976	32	NZ_CP012993	Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence	126334-126365	9	0.719
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NZ_LR723669	Rhizobium sp. Khangiran2 plasmid 2	73596-73627	9	0.719
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	MK392366	Streptomyces phage Janus, complete genome	15497-15528	9	0.719
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP034654	Xanthomonas vasicola pv. arecae strain NCPPB 2649 plasmid pXCARECAE29, complete sequence	10636-10667	9	0.719
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP015374	Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence	16041-16072	9	0.719
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NC_016053	Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence	36980-37011	9	0.719
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_LR594694	Variovorax sp. WDL1 plasmid 6	124-155	9	0.719
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_MF344578	Pseudomonas aeruginosa strain 60512 plasmid p60512-IMP, complete sequence	23499-23530	9	0.719
LS483481_2	2.25\|943311\|32\|LS483481\|CRISPRCasFinder,CRT	943311-943342	32	HG796856	Uncultured bacterium plasmid pRGF00250	451-482	9	0.719
LS483481_2	2.26\|943372\|32\|LS483481\|CRISPRCasFinder,CRT	943372-943403	32	MT374854	Yersinia phage vB_YpM_6, complete genome	883-914	9	0.719
LS483481_2	2.26\|943372\|32\|LS483481\|CRISPRCasFinder,CRT	943372-943403	32	MT374853	Yersinia phage vB_YpM_5, complete genome	2308-2339	9	0.719
LS483481_1	1.1\|924694\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924694-924725	32	NZ_KT937281	Edwardsiella ictaluri strain RUSVM-1 plasmid pEI2, complete sequence	935-966	10	0.688
LS483481_1	1.2\|924755\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	924755-924786	32	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	24503-24534	10	0.688
LS483481_1	1.7\|925060\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925060-925091	32	NZ_CP017759	Cupriavidus necator strain NH9 plasmid pENH92, complete sequence	55897-55928	10	0.688
LS483481_1	1.13\|925426\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925426-925457	32	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	24667-24698	10	0.688
LS483481_1	1.13\|925426\|32\|LS483481\|PILER-CR,CRISPRCasFinder,CRT	925426-925457	32	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	396582-396613	10	0.688
LS483481_2	2.9\|943249\|33\|LS483481\|PILER-CR	943249-943281	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	243222-243254	10	0.697
LS483481_2	2.20\|943006\|32\|LS483481\|CRISPRCasFinder,CRT	943006-943037	32	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	126933-126964	10	0.688
LS483481_2	2.24\|943250\|32\|LS483481\|CRISPRCasFinder,CRT	943250-943281	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	243222-243253	10	0.688

1. spacer 2.1|942761|33|LS483481|PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

gaaacatccgatcaaatactgcgttcgtttgag	CRISPR spacer
gaaacatccgatcaaatactgcgttcgtttgag	Protospacer
*********************************

2. spacer 2.5|943005|33|LS483481|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccgga	Protospacer
*********************************

3. spacer 2.5|943005|33|LS483481|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccgga	Protospacer
*********************************

4. spacer 2.5|943005|33|LS483481|PILER-CR matches to NC_010391 (Salmonella phage Fels-1, complete genome) position: , mismatch: 0, identity: 1.0

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccgga	Protospacer
*********************************

5. spacer 2.10|943310|33|LS483481|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
ggcctgccgtctttttattgaggtctgtaaacc	Protospacer
*********************************

6. spacer 2.12|943432|33|LS483481|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
ggagttattgtcactcgtcagtgataattttct	Protospacer
*********************************

7. spacer 2.16|942762|32|LS483481|CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

aaacatccgatcaaatactgcgttcgtttgag	CRISPR spacer
aaacatccgatcaaatactgcgttcgtttgag	Protospacer
********************************

8. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccgga	Protospacer
********************************

9. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccgga	Protospacer
********************************

10. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NC_010391 (Salmonella phage Fels-1, complete genome) position: , mismatch: 0, identity: 1.0

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccgga	Protospacer
********************************

11. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gcctgccgtctttttattgaggtctgtaaacc	Protospacer
********************************

12. spacer 2.27|943433|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

13. spacer 2.27|943433|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

14. spacer 2.27|943433|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

15. spacer 2.27|943433|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

16. spacer 1.9|925182|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

caattgcgttcttgcttatgcccagcgactta	CRISPR spacer
caattgcgttcttgcttatgcccagcgactga	Protospacer
****************************** *

17. spacer 2.4|942944|33|LS483481|PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 1, identity: 0.97

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaaag	Protospacer
**************.******************

18. spacer 2.5|943005|33|LS483481|PILER-CR matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 1, identity: 0.97

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccggc	Protospacer
********************************

19. spacer 2.6|943066|33|LS483481|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.97

ggattggcccttagataacgggagatcaagcgc	CRISPR spacer
ggattggcccttagataacgggagatcaagtgc	Protospacer
******************************.**

20. spacer 2.9|943249|33|LS483481|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.97

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
gacaaaatcggcggcccgatcgccggcgctgac	Protospacer
*****************.***************

21. spacer 2.12|943432|33|LS483481|PILER-CR matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 1, identity: 0.97

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
tgagttattgtcactcgtcagtgataattttct	Protospacer
 ********************************

22. spacer 2.12|943432|33|LS483481|PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 1, identity: 0.97

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
tgagttattgtcactcgtcagtgataattttct	Protospacer
 ********************************

23. spacer 2.12|943432|33|LS483481|PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 1, identity: 0.97

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
tgagttattgtcactcgtcagtgataattttct	Protospacer
 ********************************

24. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 1, identity: 0.969

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaaag	Protospacer
*************.******************

25. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 1, identity: 0.969

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccggc	Protospacer
*******************************

26. spacer 2.21|943067|32|LS483481|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gattggcccttagataacgggagatcaagcgc	CRISPR spacer
gattggcccttagataacgggagatcaagtgc	Protospacer
*****************************.**

27. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
acaaaatcggcggcccgatcgccggcgctgac	Protospacer
****************.***************

28. spacer 2.2|942822|33|LS483481|PILER-CR matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

gcgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
gcgtatttttgaactggccagtgctaccgatgc	Protospacer
*********************.**.********

29. spacer 2.5|943005|33|LS483481|PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 2, identity: 0.939

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgtctcccgtactgccgccggc	Protospacer
*************.******************

30. spacer 2.5|943005|33|LS483481|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 2, identity: 0.939

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcggacgcctcccgtactgccgccgga	Protospacer
********.**.*********************

31. spacer 2.17|942823|32|LS483481|CRISPRCasFinder,CRT matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

cgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
cgtatttttgaactggccagtgctaccgatgc	Protospacer
********************.**.********

32. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 2, identity: 0.938

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgtctcccgtactgccgccggc	Protospacer
************.******************

33. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 2, identity: 0.938

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcggacgcctcccgtactgccgccgga	Protospacer
*******.**.*********************

34. spacer 2.3|942883|33|LS483481|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.909

gggttacgcgggcgtctgttaaagagtcctcgt	CRISPR spacer
gggttgcgcgggcgtctgttgaagagtcctcgc	Protospacer
*****.**************.***********.

35. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_KP987215 (Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

36. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP029733 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

37. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP035635 (Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

38. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP030079 (Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

39. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP038468 (Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

40. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP024681 (Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

41. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP022492 (Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgacaa	Protospacer
**************.*************** *.

42. spacer 2.12|943432|33|LS483481|PILER-CR matches to NZ_CP014707 (Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence) position: , mismatch: 3, identity: 0.909

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
ggagttattgtcactggtcagtgatagtttttt	Protospacer
*************** **********.****.*

43. spacer 2.18|942884|32|LS483481|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

ggttacgcgggcgtctgttaaagagtcctcgt	CRISPR spacer
ggttgcgcgggcgtctgttgaagagtcctcgc	Protospacer
****.**************.***********.

44. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KP987215 (Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

45. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP029733 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

46. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP035635 (Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

47. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP030079 (Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

48. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP038468 (Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

49. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP024681 (Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

50. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP022492 (Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgacaa	Protospacer
*************.*************** *.

51. spacer 2.27|943433|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP014707 (Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence) position: , mismatch: 3, identity: 0.906

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactggtcagtgatagtttttt	Protospacer
************** **********.****.*

52. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

53. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

54. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

55. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

56. spacer 2.4|942944|33|LS483481|PILER-CR matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

57. spacer 2.10|943310|33|LS483481|PILER-CR matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

58. spacer 2.10|943310|33|LS483481|PILER-CR matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

59. spacer 2.10|943310|33|LS483481|PILER-CR matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

60. spacer 2.10|943310|33|LS483481|PILER-CR matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

61. spacer 2.10|943310|33|LS483481|PILER-CR matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

62. spacer 2.10|943310|33|LS483481|PILER-CR matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

63. spacer 2.10|943310|33|LS483481|PILER-CR matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

64. spacer 2.10|943310|33|LS483481|PILER-CR matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

65. spacer 2.10|943310|33|LS483481|PILER-CR matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

66. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

67. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

68. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

69. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

70. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

71. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

72. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

73. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

74. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

75. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

76. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

77. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

78. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

79. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

80. spacer 1.10|925243|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to MH001450 (Mycobacterium phage Jeon, complete genome) position: , mismatch: 6, identity: 0.812

atttcaaacactccgggtctgccagcgcctca	CRISPR spacer
agtccatccactccgggtcttccagctcctca	Protospacer
* *.**  ************ ***** *****

81. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 7, identity: 0.781

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cgtctcgaccggtagcttgccggaggcttggt	Protospacer
** ********* ********** . * ***

82. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 7, identity: 0.781

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cgtctcgaccggtagcttgccggaggcttggt	Protospacer
** ********* ********** . * ***

83. spacer 1.3|924816|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to MN694526 (Marine virus AFVG_250M936, complete genome) position: , mismatch: 7, identity: 0.781

caatcatctgattttttatcattgagagatat	CRISPR spacer
atatcatctaattttttatcattaagaagaat	Protospacer
  *******.*************.***.. **

84. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
ccggcctcggcggcccaatcgctggcgctggc	Protospacer
 *..  ****************.*******.*

85. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tccagcacggcggcccaatcgcgggcgctgcc	Protospacer
 * *.  *************** ******* *

86. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

87. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

88. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

89. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

90. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

91. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

92. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

93. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

94. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

95. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

96. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

97. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

98. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

99. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

100. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

101. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

102. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

103. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

104. spacer 2.27|943433|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP044178 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1) position: , mismatch: 7, identity: 0.781

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattattactcgtcagtgaaagcctttt	Protospacer
********.*.************ *...**.*

105. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ctctacgaccgggagctcgccggcatcgaagg	Protospacer
*  . ************.********** .*.

106. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ctctacgaccgggagctcgccggcatcgaagg	Protospacer
*  . ************.********** .*.

107. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccggcgccctggagcttgccggcatcgtgcg	Protospacer
*    ** ** ******************* .

108. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ctctacgaccgggagctcgccggcatcgaagg	Protospacer
*  . ************.********** .*.

109. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccggcgccctggagcttgccggcatcgtgcg	Protospacer
*    ** ** ******************* .

110. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cggctcgactgggtgcttgccgggctgctgac	Protospacer
*********.*** *********  *  **.

111. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccgtcgatcgggagcttgccggcttcacggc	Protospacer
*   ****.*************** **..**

112. spacer 1.8|925121|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

---cggccgtagcgccgctcagtccgggggatggt	CRISPR spacer
gttcgagc---acgccgctcaagccgggggatggt	Protospacer
   **. *   .*********. ************

113. spacer 1.9|925182|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028385 (Providencia heimbachae strain 99101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

caattgcgttcttgcttatgcccagcgactta	CRISPR spacer
caattgcgttctggcttacgccctgggtatcg	Protospacer
************ *****.**** * *  *..

114. spacer 2.9|943249|33|LS483481|PILER-CR matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
cccggcctcggcggcccaatcgctggcgctggc	Protospacer
  *..  ****************.*******.*

115. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP050076 (Enterobacter kobei strain 070 plasmid p070_B, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

116. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP041049 (Citrobacter sp. CF971 plasmid pBM527-3, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

117. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP022300 (Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .  *************** ******* *

118. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KX912255 (Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

119. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KX863568 (Citrobacter freundii strain AtetA plasmid pLNU-11, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

120. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_022346 (Pseudomonas aeruginosa strain ST308 plasmid pCOL-1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

121. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to LC486677 (Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

122. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KU578314 (Pseudomonas aeruginosa strain 10265 plasmid p10265-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

123. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_KR014106 (Aeromonas hydrophila strain WCHAH01 plasmid pKPC2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

124. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to MN539620 (Citrobacter sp. strain 172116965 plasmid p116965-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

125. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_007100 (Pseudomonas aeruginosa plasmid Rms149, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

126. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to MN436715 (Klebsiella pneumoniae strain NMI4661/17 plasmid pKRA-GES-5, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

127. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to LC155906 (Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcctgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

128. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP027855 (Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-3, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

129. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP038596 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

130. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_AP019194 (Aeromonas hydrophila strain GSH8-2 plasmid pGSH8-2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

131. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to KM659090 (Achromobacter sp. LM16 plasmid pLM16A1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

132. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_AP019197 (Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

133. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to DQ839391 (Uncultured bacterium plasmid pRSB105, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

134. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to MK050973 (Citrobacter freundii plasmid pCRE12-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

135. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP028566 (Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 plasmid pKPC2_045096, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

136. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP019671 (Burkholderia cenocepacia strain VC12308 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

137. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP018968 (Escherichia coli strain Ecol_542 plasmid pEC542_KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

138. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_LS998784 (Pseudomonas aeruginosa isolate 1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

139. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP026224 (Aeromonas sp. ASNIH3 plasmid pKPC-cd17, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

140. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to MN477223 (Enterobacter cloacae strain 30860 plasmid p30860-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

141. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP040685 (Pseudomonas aeruginosa strain C79 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

142. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_019267 (Serratia marcescens plasmid pRIO-5, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

143. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_011604 (Salmonella enterica subsp. enterica serovar Westhampton plasmid pWES-1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

144. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_005909 (Pseudomonas alcaligenes plasmid pRA2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

145. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP026703 (Serratia marcescens strain AR_0027 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

146. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_LT992437 (Citrobacter freundii isolate CF121SC21 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

147. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MH909348 (Klebsiella pneumoniae strain A1705 plasmid pA1705-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

148. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MH909350 (Klebsiella pneumoniae strain A1706 plasmid pA1706-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

149. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MF497782 (Morganella morganii strain Mmo-37590cz plasmid pMMO-37590cz, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

150. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MH624130 (Aeromonas taiwanensis strain L186 plasmid p186-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

151. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MH919378 (Citrobacter braakii strain CRE3 plasmid pCRE3-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

152. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP032895 (Enterobacter kobei strain WCHEK045523 plasmid pKPC2_045523, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

153. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MF168945 (Pseudomonas aeruginosa strain FFUP_PS_35 plasmid pJB35, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

154. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MG558000 (Citrobacter freundii strain Cfr-33795cz plasmid pCfr-33795cz, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

155. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_047756 (Caulobacter phage Sansa, complete genome) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
ccgcgatcggcggcccgatcggcggcgctatc	Protospacer
 *. .***********.**** *******. *

156. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
gcaggatcggcggcacaatcgtcggcgcattc	Protospacer
.**..********* ******.******   *

157. spacer 1.1|924694|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.719

cccggttttaccgccaacactcactatattgt	CRISPR spacer
gccacagttaacgccaacactgactatattca	Protospacer
 **.   *** ********** ********

158. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 9, identity: 0.719

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ttcgcggaccgggagttcgccggcatcgtggc	Protospacer
.   . *********.*.*************

159. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 9, identity: 0.719

--cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
accga--ggacggggaacttgccggcatcgtccg	Protospacer
  **.   *** ****.**************  .

160. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.719

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccggcgccctggagcttgccggcatcgtccg	Protospacer
*    ** ** ******************  .

161. spacer 1.11|925304|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cggcggcggacgccgctcagatagccaaaacc	CRISPR spacer
gggcggcggaagccgctcagatagcaggcgat	Protospacer
 ********* ************** .. . .

162. spacer 1.13|925426|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
atctttttttatttgttctattgccagtttaa	Protospacer
  .************* ******.**** .

163. spacer 1.13|925426|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to KX156762 (Staphylococcus phage vB_SauS_IMEP5, complete genome) position: , mismatch: 9, identity: 0.719

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
ctctttttttatttgtacaagtgtcaaacacg	Protospacer
* .*************** * *****.   *

164. spacer 1.21|925914|32|LS483481|CRISPRCasFinder,CRT matches to NC_047851 (Brevibacterium phage LuckyBarnes, complete genome) position: , mismatch: 9, identity: 0.719

ccggatgaaaacgcctacccggaagactacga	CRISPR spacer
gcagatgaaatcgcctaccgggaagagctggc	Protospacer
 *.******* ******** ****** .  *

165. spacer 2.2|942822|33|LS483481|PILER-CR matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.727

gcgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
gaatttttttgaactggccgtcgccaccgcaat	Protospacer
* .* **************. ********  ..

166. spacer 2.9|943249|33|LS483481|PILER-CR matches to NC_047756 (Caulobacter phage Sansa, complete genome) position: , mismatch: 9, identity: 0.727

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
accgcgatcggcggcccgatcggcggcgctatc	Protospacer
. *. .***********.**** *******. *

167. spacer 2.17|942823|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

cgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
aatttttttgaactggccgtcgccaccgcaat	Protospacer
 .* **************. ********  ..

168. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP012988 (Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gaaaaagtttcccggagacattctgatgagaa	Protospacer
*  ...*******.***.***********.*.

169. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP045676 (Klebsiella pneumoniae strain WSD411 plasmid pWSD411_3, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gaaaaagtttcccggagacattctgatgagaa	Protospacer
*  ...*******.***.***********.*.

170. spacer 2.19|942945|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP012993 (Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gaaaaagtttcccggagacattctgatgagaa	Protospacer
*  ...*******.***.***********.*.

171. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NZ_LR723669 (Rhizobium sp. Khangiran2 plasmid 2) position: , mismatch: 9, identity: 0.719

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
catcgacccatgcctccgatactgccgccgga	Protospacer
*.   .*  ******** .*************

172. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to MK392366 (Streptomyces phage Janus, complete genome) position: , mismatch: 9, identity: 0.719

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gacaggaagctgcctgccgtactgccgccgat	Protospacer
 . * * ** ***** **************.

173. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP034654 (Xanthomonas vasicola pv. arecae strain NCPPB 2649 plasmid pXCARECAE29, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcgcacggcagcccaatcgcgggcgctgcc	Protospacer
 *. .  ****.********** ******* *

174. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP015374 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggccgcccaatcgcgggcgctgcc	Protospacer
 *  .  **** ********** ******* *

175. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NC_016053 (Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggccgcccaatcgcgggcgctgcc	Protospacer
 *  .  **** ********** ******* *

176. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_LR594694 (Variovorax sp. WDL1 plasmid 6) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggccgcccaatcgcgggcgctgcc	Protospacer
 *  .  **** ********** ******* *

177. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_MF344578 (Pseudomonas aeruginosa strain 60512 plasmid p60512-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcagcccaatcgcgggcgctgcc	Protospacer
 *  .  ****.********** ******* *

178. spacer 2.25|943311|32|LS483481|CRISPRCasFinder,CRT matches to HG796856 (Uncultured bacterium plasmid pRGF00250) position: , mismatch: 9, identity: 0.719

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcgttttttcttttttttgaggtcagtaaaca	Protospacer
 * * .. ******* ******** ******

179. spacer 2.26|943372|32|LS483481|CRISPRCasFinder,CRT matches to MT374854 (Yersinia phage vB_YpM_6, complete genome) position: , mismatch: 9, identity: 0.719

taatcattttgtttaaatcccggatcacctcc	CRISPR spacer
tcgccattttgtttaaatcccgtgtcattatc	Protospacer
* ..****************** .***.. .*

180. spacer 2.26|943372|32|LS483481|CRISPRCasFinder,CRT matches to MT374853 (Yersinia phage vB_YpM_5, complete genome) position: , mismatch: 9, identity: 0.719

taatcattttgtttaaatcccggatcacctcc	CRISPR spacer
tcgccattttgtttaaatcccgtgtcattatc	Protospacer
* ..****************** .***.. .*

181. spacer 1.1|924694|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT937281 (Edwardsiella ictaluri strain RUSVM-1 plasmid pEI2, complete sequence) position: , mismatch: 10, identity: 0.688

cccggttttaccgccaacactcactatattgt	CRISPR spacer
actttttttaccgccaacactccctctaactg	Protospacer
 *.  ***************** ** ** .

182. spacer 1.2|924755|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 10, identity: 0.688

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ttcctcggccgggaacttgccggcataacgct	Protospacer
.  ****.******.*********** ..*

183. spacer 1.7|925060|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017759 (Cupriavidus necator strain NH9 plasmid pENH92, complete sequence) position: , mismatch: 10, identity: 0.688

gagcacttttactgtaggacttgtatgaatct	CRISPR spacer
cagcacttttactgtcggccttgtctccgggg	Protospacer
 ************** ** ***** *  .

184. spacer 1.13|925426|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
tattttttttatttttactaatgtcttttttt	Protospacer
..************ ***** ****  * ...

185. spacer 1.13|925426|32|LS483481|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
ttctttttttattttgactattgtcaacaata	Protospacer
. .***********  **********..* .

186. spacer 2.9|943249|33|LS483481|PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
gctggtctcggtggcccaatcgctggcgctgga	Protospacer
* ...  ****.***********.*******.

187. spacer 2.20|943006|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 10, identity: 0.688

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgccgacgatgccgcccgtgctgccgccggt	Protospacer
  . .*  ****** *****.**********

188. spacer 2.24|943250|32|LS483481|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
ctggtctcggtggcccaatcgctggcgctgga	Protospacer
 ...  ****.***********.*******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1647477 : 1656649

Enterobacteria_phage(66.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI83512.1\|1647477_1648425_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
SQI83513.1\|1648408_1649140_+	putative permease transmembrane component	NA	NA	NA	NA
SQI83514.1\|1649120_1649228_-	membrane protein	NA	NA	NA	NA
SQI83515.1\|1649287_1650019_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
SQI83516.1\|1650241_1651927_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
SQI83517.1\|1651923_1652643_+	two-component system response regulator	NA	NA	NA	NA
SQI83518.1\|1652689_1653157_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
SQI83519.1\|1653213_1653744_-	lipoprotein	NA	NA	NA	NA
SQI83520.1\|1653915_1654374_-	lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
SQI83521.1\|1654615_1656649_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_2

1723878 : 1734385

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI83580.1\|1723878_1725282_+	Colanic acid biosynthesis protein wcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
SQI83581.1\|1725459_1726353_+	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
SQI83582.1\|1726729_1727815_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.4e-103	53.9
SQI83583.1\|1727814_1728714_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
SQI83584.1\|1728761_1729640_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.5e-108	65.2
SQI83585.1\|1729643_1730192_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.9e-52	58.0
SQI83586.1\|1730197_1731172_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
SQI83587.1\|1731187_1731961_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
SQI83588.1\|1731965_1733045_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	2.3e-16	24.5
SQI83589.1\|1733071_1734385_+	lipopolysaccharide biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_3

1912515 : 1968071

Enterobacteria_phage(23.53%)

terminase,integrase,transposase,tRNA,protease

attL 1918901:1918915|attR 1943030:1943044

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI83900.1\|1912515_1914288_+\|tRNA	aspartyl-tRNA synthetase	NA	NA	NA	NA
SQI83901.1\|1914390_1914843_+	dATP pyrophosphohydrolase	NA	NA	NA	NA
SQI83902.1\|1914872_1915613_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA
SQI83903.1\|1915649_1916171_+	crossover junction endodeoxyribonuclease	G3MA90	Bacillus_virus	2.6e-10	35.1
SQI83904.1\|1916172_1916772_-	protein yebB	NA	NA	NA	NA
SQI83905.1\|1916980_1917673_+	membrane protein	NA	NA	NA	NA
SQI83906.1\|1918031_1918643_+	Holliday junction ATP-dependent DNA helicase ruvA	NA	NA	NA	NA
SQI83907.1\|1918651_1919662_+	Holliday junction DNA helicase	A0A127AWE7	Bacillus_phage	2.4e-07	26.4
1918901:1918915	attL	NA	NA	NA	NA
SQI83908.1\|1919740_1920526_-	high-affinity zinc uptake system membrane protein	NA	NA	NA	NA
SQI83909.1\|1920522_1921278_-	high-affinity zinc transporter ATPase	G3M9Y6	Bacillus_virus	8.5e-18	29.4
SQI83910.1\|1921299_1922301_+	high-affinity zinc transporter periplasmic protein	NA	NA	NA	NA
SQI83911.1\|1922316_1923636_+	Cell wall endopeptidase family M23/M37	A8ATH6	Listeria_phage	2.6e-14	40.9
SQI83912.1\|1923752_1924724_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA
SQI83913.1\|1924796_1926239_-	pyruvate kinase A	NA	NA	NA	NA
SQI83914.1\|1926362_1927232_-	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
SQI83915.1\|1927573_1929049_+	glucose 6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
SQI83916.1\|1929283_1931095_+	6-phosphogluconate dehydratase	NA	NA	NA	NA
SQI83917.1\|1931132_1931774_+	KHG/KDPG aldolase	NA	NA	NA	NA
SQI83918.1\|1931873_1933052_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
SQI83919.1\|1933182_1933473_+	DNA damage-inducible gene in SOS regulon-dependent on cyclic AMP and H-NS	NA	NA	NA	NA
SQI83920.1\|1933540_1933894_+	protein YebF	NA	NA	NA	NA
SQI83921.1\|1933987_1934647_+	inner membrane protein YebE	NA	NA	NA	NA
SQI83945.1\|1934859_1936911_+	oligopeptidase	NA	NA	NA	NA
SQI83946.1\|1936947_1937646_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.8e-07	40.4
SQI83947.1\|1937669_1938326_-	Putative amido hydrolase	NA	NA	NA	NA
SQI83948.1\|1938433_1938664_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
SQI83949.1\|1938801_1939176_+	Copper resistance protein CopC	NA	NA	NA	NA
SQI83950.1\|1939176_1940052_+	membrane protein	NA	NA	NA	NA
SQI83951.1\|1940068_1940422_+	Protein of uncharacterised function (DUF2511)	NA	NA	NA	NA
SQI83952.1\|1940796_1941876_-\|integrase	phage integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.3e-101	52.9
SQI83953.1\|1941872_1943144_-	exonuclease VIII	Q9QF34	Lambdoid_phage	3.8e-55	66.7
1943030:1943044	attR	NA	NA	NA	NA
SQI83954.1\|1943515_1943770_+	Uncharacterised protein	NA	NA	NA	NA
SQI83955.1\|1944082_1944250_-	lytic enzyme	NA	NA	NA	NA
SQI83956.1\|1944552_1945044_+\|terminase	terminase	Q9EYD0	Enterobacteria_phage	1.9e-42	56.2
SQI83957.1\|1945030_1945210_+\|terminase	phage terminase large subunit	Q9EYD1	Enterobacteria_phage	2.7e-07	53.2
SQI83958.1\|1945229_1945604_+\|terminase	phage terminase large subunit	Q8VNN7	Enterobacteria_phage	1.3e-59	82.9
SQI83959.1\|1947734_1947893_-	Uncharacterised protein	NA	NA	NA	NA
SQI83960.1\|1948493_1948616_+	Uncharacterised protein	NA	NA	NA	NA
SQI83961.1\|1949064_1949679_-	disulfide bond formation protein	NA	NA	NA	NA
SQI83962.1\|1949688_1949847_-	membrane protein	NA	NA	NA	NA
SQI83963.1\|1949979_1950894_-	drug/metabolite transporter DMT permease	NA	NA	NA	NA
SQI83964.1\|1951685_1952210_-	fimbriae usher protein	NA	NA	NA	NA
SQI83965.1\|1952226_1952394_+	error-prone repair: component of DNA polymerase V with UmuD'	I6RSM4	Salmonella_phage	4.3e-07	90.0
SQI83966.1\|1952332_1952899_+\|transposase	transposase, Mutator family	A0A218MNI5	uncultured_virus	9.4e-38	45.6
SQI83967.1\|1953709_1953910_+	Uncharacterised protein	NA	NA	NA	NA
SQI83982.1\|1954038_1954458_+	acetyltransferase	NA	NA	NA	NA
SQI83984.1\|1954586_1955099_-	Uncharacterised protein	NA	NA	NA	NA
SQI83986.1\|1955391_1955787_-	protein ycgX	C6ZCX4	Enterobacteria_phage	7.0e-16	32.8
SQI83988.1\|1956470_1957193_+	guanine nucleotide exchange factor SopE	NA	NA	NA	NA
SQI83990.1\|1957477_1957642_+	membrane protein	NA	NA	NA	NA
SQI84002.1\|1957632_1958517_+	Serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.5e-58	51.4
SQI84003.1\|1958535_1958727_-	putative secreted protein	NA	NA	NA	NA
SQI84004.1\|1958837_1959077_-	conserved domain protein	NA	NA	NA	NA
SQI84005.1\|1959190_1960732_-	rRNA (cytosine-C(5)-)-methyltransferase RsmF	NA	NA	NA	NA
SQI84006.1\|1960707_1963341_-	mce-related protein	NA	NA	NA	NA
SQI84007.1\|1963309_1964593_-	Paraquat-inducible protein A	NA	NA	NA	NA
SQI84008.1\|1964649_1965219_+	GAF domain-containing protein	NA	NA	NA	NA
SQI84009.1\|1965316_1966003_+	ProP effector	NA	NA	NA	NA
SQI84010.1\|1966022_1968071_+\|protease	Tail-specific protease precursor	A0A0R6PIZ1	Moraxella_phage	1.0e-86	33.5

DBSCAN-SWA_4

2596268 : 2632534

Edwardsiella_phage(22.22%)

terminase,integrase,lysis,transposase,holin,tail

attL 2584408:2584422|attR 2626551:2626565

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2584408:2584422	attL	NA	NA	NA	NA
SQI87633.1\|2596268_2596508_+	virulence protein	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
SQI87635.1\|2596718_2596883_-\|transposase	transposase	NA	NA	NA	NA
SQI87637.1\|2597380_2598190_+	cytolethal distending toxin subunit CdtB	A5LH53	Enterobacteria_phage	2.1e-62	50.0
SQI87639.1\|2598262_2598640_+	Protein of uncharacterised function (DUF1353)	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
SQI87641.1\|2598787_2599330_-	Predicted lysozyme (DUF847)	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
SQI87642.1\|2599522_2600251_-	Pertussis toxin, subunit 1 subfamily	A0A0U2KD26	Escherichia_phage	1.6e-61	52.5
SQI87644.1\|2600267_2600681_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	4.2e-19	38.6
SQI87646.1\|2601727_2602852_-	bacteriophage protein	NA	NA	NA	NA
SQI87648.1\|2603297_2603510_-	isocitrate dehydrogenase	Q77Z09	Phage_21	2.5e-20	90.7
SQI87668.1\|2603763_2604435_+	Gifsy-2 prophage protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.1e-80	59.9
SQI87670.1\|2604754_2606866_-	SspH1	Q9MBL9	Phage_Gifsy-2	2.1e-26	46.9
SQI87671.1\|2607037_2607811_-\|integrase	integrase	A0A077SLK2	Escherichia_phage	2.6e-131	87.5
SQI87672.1\|2607764_2608067_-	regulator	A0A077SLK2	Escherichia_phage	1.2e-39	81.5
SQI87673.1\|2609975_2611430_-\|tail	side tail fiber protein	A0A0M3ULF6	Salmonella_phage	7.0e-45	74.3
SQI87674.1\|2611419_2612022_-	Protein of uncharacterised function (DUF2612)	A0A2R3UAM9	Myoviridae_environmental_samples	3.3e-33	38.9
SQI87698.1\|2612023_2613265_-	bacteriophage protein	A0A077KGW9	Edwardsiella_phage	9.1e-102	49.9
SQI87701.1\|2613261_2613618_-	Uncharacterised protein	A0A077KCA1	Edwardsiella_phage	9.5e-20	49.1
SQI87703.1\|2613630_2614308_-	bacteriophage protein	A0A077KAY0	Edwardsiella_phage	2.4e-32	36.4
SQI87705.1\|2614288_2615158_-	Uncharacterised protein	A0A077KC17	Edwardsiella_phage	9.1e-32	32.7
SQI87706.1\|2615154_2615457_-	Uncharacterised protein	A0A077K9U4	Edwardsiella_phage	2.7e-23	48.5
SQI87707.1\|2615456_2616167_-	Uncharacterised protein	A0A077KGW3	Edwardsiella_phage	6.5e-28	34.6
SQI87708.1\|2616163_2618335_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	1.4e-49	67.1
SQI87709.1\|2618542_2618947_-	Uncharacterised protein	H9C0W7	Aeromonas_phage	1.8e-19	44.8
SQI87710.1\|2618946_2619393_-	Uncharacterised protein	Q2NPD1	Xanthomonas_phage	4.8e-21	40.4
SQI87711.1\|2619393_2620878_-	Protein of uncharacterised function (DUF3383)	A0A077KGV4	Edwardsiella_phage	3.1e-96	41.0
SQI87712.1\|2620858_2621404_-	Uncharacterised protein	NA	NA	NA	NA
SQI87713.1\|2621388_2621754_-	Uncharacterised protein	A0A077KAW7	Edwardsiella_phage	3.0e-21	40.5
SQI87714.1\|2621750_2622335_-	Mu-like prophage protein gpG	H9C0W2	Aeromonas_phage	6.1e-16	29.8
SQI87715.1\|2622328_2622775_-	Uncharacterised protein	A0A068CGG9	Acinetobacter_phage	1.8e-15	40.6
SQI87716.1\|2622781_2623129_-	Uncharacterised protein	H9C0V9	Aeromonas_phage	3.9e-10	40.2
SQI87717.1\|2623132_2624161_-	Uncharacterised protein	A0A219YBB0	Aeromonas_phage	8.7e-82	48.4
SQI87718.1\|2624160_2624643_-	Uncharacterised protein	K4HYQ5	Acinetobacter_phage	5.8e-20	41.2
SQI87719.1\|2624644_2625991_-	Uncharacterized protein conserved in bacteria	A0A219YCD3	Aeromonas_phage	1.1e-68	36.5
SQI87720.1\|2625987_2626677_-	putative bacteriophage protein	H9C0V1	Aeromonas_phage	1.0e-57	48.7
2626551:2626565	attR	NA	NA	NA	NA
SQI87721.1\|2626717_2628238_-	Phage-associated protein	A0A2R3UAL5	Myoviridae_environmental_samples	6.3e-105	43.7
SQI87722.1\|2628237_2629857_-	gp33 TerL	A0A0M5M1R6	Salmonella_phage	1.5e-261	81.4
SQI87723.1\|2629859_2630489_-\|terminase	putative prophage terminase small subunit	A0A0M3ULJ9	Salmonella_phage	1.1e-106	97.1
SQI87724.1\|2630932_2631400_-\|lysis	bacteriophage lysis protein	H6WRZ5	Salmonella_phage	1.6e-59	76.8
SQI87725.1\|2631401_2631500_-	Phage protein	NA	NA	NA	NA
SQI87726.1\|2631708_2632248_-	Phage endolysin R	S5MQK2	Escherichia_phage	5.7e-77	74.1
SQI87727.1\|2632225_2632534_-\|holin	phage-holin analog protein	NA	NA	NA	NA

DBSCAN-SWA_5

2635645 : 2651235

Salmonella_phage(29.41%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI87729.1\|2635645_2636008_-	phage antiterminator	Q777W5	Enterobacteria_phage	1.7e-53	80.0
SQI87730.1\|2636017_2636326_-	Protein of uncharacterised function (DUF1364)	K7P7Q1	Enterobacteria_phage	4.8e-36	79.3
SQI87731.1\|2636497_2637097_-	IrsA	A0A0U2RT94	Escherichia_phage	9.1e-100	84.9
SQI87732.1\|2637160_2637505_-	putative bacteriophage cohesive ends	NA	NA	NA	NA
SQI87733.1\|2638018_2638291_-	Uncharacterised protein	NA	NA	NA	NA
SQI87734.1\|2638287_2638683_-	DNA-binding protein	A0A088CBK9	Shigella_phage	3.7e-17	37.0
SQI87735.1\|2638694_2639156_-	Replication protein 14	A0A0U2JGJ0	Escherichia_phage	3.2e-68	73.9
SQI87736.1\|2639148_2640156_-	replication protein	A0A0U2RT81	Escherichia_phage	5.6e-126	68.7
SQI87737.1\|2640202_2640697_-	Protein of uncharacterised function (DUF1019)	NA	NA	NA	NA
SQI87738.1\|2640683_2640938_-	CRO	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
SQI87739.1\|2641102_2641435_+	putative regulator	A0A0M4R5D1	Salmonella_phage	5.6e-06	32.7
SQI87740.1\|2641730_2641886_+	Protein of uncharacterised function (DUF1391)	M4QQ57	Salicola_phage	8.0e-08	55.3
SQI87741.1\|2642267_2642552_+	DNA breaking-rejoining protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
SQI87742.1\|2642626_2642962_+	Uncharacterised protein	NA	NA	NA	NA
SQI87743.1\|2643102_2646117_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	3.5e-224	47.2
SQI87744.1\|2646129_2647224_+	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	2.9e-91	50.9
SQI87745.1\|2647259_2647580_+	Uncharacterised protein	A0A222YY67	Escherichia_phage	1.8e-33	59.2
SQI87746.1\|2647572_2647905_+	bacteriophage protein	S4TNP2	Salmonella_phage	8.8e-20	81.8
SQI87747.1\|2647901_2648453_+	Eaa protein	A0A192Y7X3	Salmonella_phage	2.8e-10	34.5
SQI87748.1\|2648502_2648739_+	excisionase	NA	NA	NA	NA
SQI87749.1\|2648728_2649871_+	Integrase	O21929	Phage_21	2.2e-171	79.4
SQI87750.1\|2649984_2651235_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	90.7

DBSCAN-SWA_6

3246773 : 3281695

Salmonella_phage(38.3%)

coat,integrase,capsid,head,holin,portal,tail

attL 3238545:3238561|attR 3287098:3287114

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3238545:3238561	attL	NA	NA	NA	NA
SQI91248.1\|3246773_3248996_-\|tail	Bifunctional tail protein	A0A1W5PUZ2	Salmonella_phage	6.5e-292	71.1
SQI91250.1\|3249151_3251083_-	DNA tranfer protein	I1TEJ6	Salmonella_phage	0.0e+00	95.5
SQI91251.1\|3251082_3252453_-	DNA transfer protein	A0A1R3Y5Q4	Salmonella_virus	2.8e-245	98.0
SQI91253.1\|3252462_3253152_-	DNA transfer protein gp7	B9UDK9	Salmonella_phage	6.6e-94	93.4
SQI91255.1\|3253154_3253610_-\|capsid	Phage capsid and scaffold protein	I6R0L6	Salmonella_phage	8.8e-87	99.3
SQI91257.1\|3253609_3254311_-\|head	head completion protein	A0A192Y6T9	Salmonella_phage	2.0e-74	95.7
SQI91259.1\|3254314_3255733_-	DNA stabilization protein	A0A2D1GM00	Escherichia_phage	3.9e-274	98.7
SQI91261.1\|3255741_3256224_-	DNA stabilization protein	Q9AYZ5	Salmonella_phage	4.2e-87	99.4
SQI91263.1\|3256198_3256384_-	Uncharacterised protein	Q716G9	Shigella_phage	2.7e-26	100.0
SQI91265.1\|3256426_3257698_-\|coat	P22 coat protein - gene protein 5	Q9AYZ7	Salmonella_phage	1.8e-230	95.7
SQI91267.1\|3257709_3258594_-	DNA repair ATPase	Q716H1	Shigella_phage	4.4e-143	99.3
SQI91269.1\|3258607_3260698_-\|portal	portal protein p19	Q9AYZ9	Salmonella_phage	0.0e+00	99.3
SQI91271.1\|3260736_3262149_-	Terminase large subunit	Q716H3	Shigella_phage	4.1e-276	99.1
SQI91273.1\|3262145_3262586_-	LF82 chromosome	C7U0W1	Enterobacteria_phage	3.5e-80	100.0
SQI91275.1\|3262588_3262831_-	Orf80	A5VW77	Enterobacteria_phage	1.3e-36	100.0
SQI91277.1\|3263054_3263585_-	phage protein	A0A2H4FQV0	Salmonella_phage	1.5e-90	96.0
SQI91279.1\|3263797_3264265_-	gp15	A0A291AWW3	Escherichia_phage	2.3e-74	94.8
SQI91281.1\|3264261_3264738_-	lysin	A5VW81	Enterobacteria_phage	7.5e-89	100.0
SQI91283.1\|3264721_3265045_-\|holin	holin-like protein	G5DA93	Enterobacteria_phage	1.3e-52	100.0
SQI91284.1\|3265544_3266063_-	gp23-like protein	A0A192Y911	Salmonella_phage	7.7e-95	98.8
SQI91286.1\|3266053_3266725_-	Serine/threonine-protein phosphatase	Q716B9	Shigella_phage	2.3e-131	98.2
SQI91288.1\|3266702_3266909_-	protein ninH	Q716C0	Shigella_phage	7.3e-33	100.0
SQI91290.1\|3266905_3267511_-	Phage NinG rap recombination	G9L693	Escherichia_phage	2.9e-93	95.0
SQI91292.1\|3267511_3267730_-	Uncharacterised protein	Q5G8S1	Enterobacteria_phage	7.0e-34	98.6
SQI91295.1\|3267710_3267893_-	NinF family protein	Q5G8S2	Enterobacteria_phage	1.3e-28	96.7
SQI91296.1\|3267889_3268066_-	protein ninE	Q5G8S3	Enterobacteria_phage	7.4e-18	75.9
SQI91298.1\|3268062_3268281_-	Uncharacterised protein	NA	NA	NA	NA
SQI91300.1\|3268277_3268826_-	DNA adenine methylase	E5AGF8	Erwinia_phage	2.3e-65	63.1
SQI91301.1\|3268822_3269263_-	ninB protein	K7PKW7	Enterobacterial_phage	1.0e-79	98.6
SQI91303.1\|3269336_3269615_-	gp62	Q5G8S7	Enterobacteria_phage	8.7e-45	96.6
SQI91305.1\|3269611_3270988_-	DNA helicase	A0A075B8G2	Enterobacteria_phage	3.3e-254	100.0
SQI91306.1\|3270984_3271800_-	Replication protein O	A0A075B8J2	Enterobacteria_phage	9.4e-148	100.0
SQI91308.1\|3271792_3271939_-	Protein of uncharacterised function (DUF2740)	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
SQI91310.1\|3271973_3272252_-	cII	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
SQI91312.1\|3272358_3272544_-	regulatory protein cro (Antirepressor)	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
SQI91314.1\|3272915_3273275_+	Phage repressor protein C2	B1B6L9	Salmonella_phage	3.7e-64	100.0
SQI91316.1\|3273628_3273931_+	antitermination protein	I6S5Z3	Salmonella_phage	1.6e-47	95.0
SQI91318.1\|3274009_3275128_+	Gp53	Q5G8T6	Enterobacteria_phage	1.6e-68	72.3
SQI91319.1\|3275308_3275473_+	cIII protein family	K7P848	Enterobacteria_phage	5.7e-12	70.0
SQI91321.1\|3275457_3275610_+	Bacteriophage lambda Kil protein	NA	NA	NA	NA
SQI91323.1\|3275606_3275714_+	Uncharacterised protein	NA	NA	NA	NA
SQI91325.1\|3275694_3276003_+	Uncharacterised protein	K7PJM4	Enterobacteria_phage	4.0e-51	95.1
SQI91327.1\|3275999_3276911_+	recombination and repair protein RecT	K7PKG9	Enterobacteria_phage	1.1e-168	99.3
SQI91329.1\|3276894_3277377_+	Siphovirus Gp157	K7P6T5	Enterobacteria_phage	4.6e-78	98.1
SQI91335.1\|3277719_3277887_+	prophage protein	A0A1V0E5L8	Salmonella_phage	1.3e-24	100.0
SQI91336.1\|3277883_3278138_+	Uncharacterised protein	A0A1V0E5L1	Salmonella_phage	3.4e-40	100.0
SQI91339.1\|3278124_3278991_+	Ead protein	A0A1V0E5L5	Salmonella_phage	1.6e-158	99.7
SQI91340.1\|3279214_3279970_+	Eaa protein	Q858C8	Salmonella_phage	2.1e-125	100.0
SQI91342.1\|3279969_3280242_+	Uncharacterised protein	A0A2H4FNB3	Salmonella_phage	6.9e-39	100.0
SQI91346.1\|3280531_3281695_+\|integrase	integrase	B9UDL9	Salmonella_phage	5.0e-227	99.7
3287098:3287114	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3311818 : 3371061

Bacillus_phage(25.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI91406.1\|3311818_3312736_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
SQI91407.1\|3312732_3313185_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
SQI91408.1\|3313185_3313602_-	copper efflux regulator	NA	NA	NA	NA
SQI91415.1\|3313711_3316213_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	6.7e-112	37.2
SQI91419.1\|3316365_3317202_+	Secreted protein	NA	NA	NA	NA
SQI91423.1\|3318274_3318754_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
SQI91427.1\|3318870_3320523_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
SQI91430.1\|3320695_3321916_+	fosmidomycin resistance protein	NA	NA	NA	NA
SQI91434.1\|3321927_3322053_-	Uncharacterised protein	NA	NA	NA	NA
SQI91438.1\|3322130_3323807_+	transport protein	NA	NA	NA	NA
SQI91442.1\|3323855_3325160_-	inosine/guanosine kinase	NA	NA	NA	NA
SQI91446.1\|3325312_3326284_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	2.3e-15	27.8
SQI91450.1\|3326280_3327243_-	ferrochelatase	NA	NA	NA	NA
SQI91454.1\|3327470_3328115_-	adenylate kinase	NA	NA	NA	NA
SQI91458.1\|3328466_3330341_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.7e-115	36.9
SQI91461.1\|3330451_3331057_-	recombination protein RecR	NA	NA	NA	NA
SQI91464.1\|3331056_3331386_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
SQI91467.1\|3333473_3334025_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.0e-28	45.2
SQI91472.1\|3334177_3334555_-	Inner membrane protein YbaN	NA	NA	NA	NA
SQI91475.1\|3334635_3335151_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
SQI91477.1\|3335164_3335332_+	Putative inner membrane protein	NA	NA	NA	NA
SQI91480.1\|3335401_3336337_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	1.6e-63	52.1
SQI91488.1\|3336378_3339741_-	integral membrane protein AefA	NA	NA	NA	NA
SQI91490.1\|3339859_3340513_-	potential acrAB operon repressor	NA	NA	NA	NA
SQI91492.1\|3340654_3341848_+	acriflavin resistance protein A	NA	NA	NA	NA
SQI91498.1\|3341870_3345020_+	acriflavin resistance protein B	NA	NA	NA	NA
SQI91501.1\|3345515_3345890_+	Hha toxicity attenuator	NA	NA	NA	NA
SQI91504.1\|3345917_3346136_+	hemolysin expression modulating protein	NA	NA	NA	NA
SQI91521.1\|3346314_3346866_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQI91522.1\|3346983_3347454_+	Putative inner membrane protein	NA	NA	NA	NA
SQI91524.1\|3347509_3347650_-	LSU ribosomal protein L36p	NA	NA	NA	NA
SQI91526.1\|3347655_3347916_-	50S ribosomal protein L31	NA	NA	NA	NA
SQI91528.1\|3348140_3349691_+	Uncharacterized protein ylaB	NA	NA	NA	NA
SQI91530.1\|3349999_3350311_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
SQI91532.1\|3350343_3350913_-	lipoprotein	NA	NA	NA	NA
SQI91534.1\|3351127_3351988_+	acyl-CoA thioesterase II	NA	NA	NA	NA
SQI91536.1\|3352087_3353374_-	ammonium transporter	NA	NA	NA	NA
SQI91538.1\|3353405_3353744_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
SQI91540.1\|3353956_3355738_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	5.4e-39	26.7
SQI91542.1\|3355730_3357503_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	4.7e-51	29.8
SQI91545.1\|3357543_3358002_-	transcriptional regulator	NA	NA	NA	NA
SQI91547.1\|3358114_3359170_+	lyase	NA	NA	NA	NA
SQI91549.1\|3359218_3360037_-	HMP-PP phosphatase	NA	NA	NA	NA
SQI91551.1\|3360137_3361838_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQI91553.1\|3361902_3362598_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.3e-88	68.4
SQI91555.1\|3362705_3363104_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
SQI91557.1\|3363207_3363582_-	competence protein ComEA	NA	NA	NA	NA
SQI91559.1\|3363731_3365603_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
SQI91561.1\|3365893_3366166_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.9e-20	58.4
SQI91563.1\|3366374_3368729_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	1.6e-224	52.5
SQI91565.1\|3368914_3370186_-\|protease	ATP-dependent clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.6e-131	56.5
SQI91567.1\|3370437_3371061_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483481

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection