CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483478	Salmonella enterica subsp. houtenae serovar Houten strain NCTC10401 genome assembly, chromosome: 1	0 crisprs	WYL,csa3,cas3,DEDDh,DinG,c2c9_V-U4,cas14j	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1038520 : 1054105

Salmonella_phage(73.33%)

tail,transposase,integrase

attL 1041165:1041202|attR 1054517:1054554

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI70384.1\|1038520_1038652_+	Uncharacterised protein	A0A1S6L028	Salmonella_phage	2.2e-14	97.7
SQI70387.1\|1038910_1039651_-	carbonic anhydrase chloroplast precursor	NA	NA	NA	NA
SQI70390.1\|1039879_1040116_-\|transposase	transposase	S5WIU1	Leptospira_phage	4.6e-15	54.5
SQI70391.1\|1040112_1040490_-\|transposase	transposase IS3	S5WIU1	Leptospira_phage	1.1e-10	35.5
SQI70394.1\|1040754_1040940_-\|transposase	transposase	NA	NA	NA	NA
1041165:1041202	attL	NA	NA	NA	NA
SQI70396.1\|1041319_1042345_-\|integrase	phage integrase	A0A1S6L016	Salmonella_phage	8.3e-202	99.7
SQI70398.1\|1042348_1042981_-	phage repressor protein cI	A0A1S6KZZ7	Salmonella_phage	1.4e-66	58.6
SQI70401.1\|1043097_1043337_+	phage regulatory protein	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
SQI70403.1\|1043372_1044680_+	phage regulatory protein	A0A1S6L008	Salmonella_phage	3.2e-65	93.2
SQI70406.1\|1045366_1046524_-	Uncharacterized protein conserved in bacteria	A0A088CPR9	Enterobacteria_phage	1.5e-29	28.8
SQI70408.1\|1046896_1047454_+	DNA-invertase	A0A0F7LA37	Escherichia_phage	8.5e-84	85.2
SQI70410.1\|1047537_1048710_+\|tail	major tail sheath protein	A0A1S6KZY7	Salmonella_phage	7.0e-221	99.2
SQI70412.1\|1048719_1049235_+\|tail	phage major tail tube protein FII	E5G6P8	Salmonella_phage	2.7e-92	99.4
SQI70415.1\|1049289_1049592_+\|tail	phage tail protein E	A0A1S6KZZ9	Salmonella_phage	2.5e-45	100.0
SQI70417.1\|1049706_1052526_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	99.5
SQI70418.1\|1052522_1053008_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.7e-76	98.1
SQI70421.1\|1053004_1054105_+	phage late control D family protein	E5G6Q3	Salmonella_phage	4.2e-191	95.4
1054517:1054554	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1109393 : 1163876

Enterobacteria_phage(33.33%)

portal,tRNA,tail,terminase,integrase,head

attL 1095786:1095801|attR 1136408:1136423

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1095786:1095801	attL	NA	NA	NA	NA
SQI70488.1\|1109393_1110431_+\|tRNA	tRNA/rRNA methyltransferase YfiF	NA	NA	NA	NA
SQI70490.1\|1110545_1111235_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
SQI70491.1\|1111552_1111936_+	Pyruvate formate-lyase	A0A088FS37	Shigella_phage	4.7e-33	71.8
SQI70493.1\|1112051_1113386_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.2e-43	29.7
SQI70494.1\|1113515_1114253_+\|tRNA	tRNA (adenine-N(6)-)-methyltransferase	NA	NA	NA	NA
SQI70495.1\|1114237_1115860_-	L-aspartate oxidase	NA	NA	NA	NA
SQI70497.1\|1116284_1116860_+	RNA polymerase sigma-E factor (sigma-24)	NA	NA	NA	NA
SQI70498.1\|1116891_1117542_+	anti-RNA polymerase sigma factor SigE	NA	NA	NA	NA
SQI70500.1\|1117541_1118498_+	anti-sigma E factor	NA	NA	NA	NA
SQI70501.1\|1118494_1118974_+	SoxR reducing system protein RseC	NA	NA	NA	NA
SQI70733.1\|1119471_1120701_+\|integrase	integrase	H6WRW7	Salmonella_phage	4.9e-233	94.1
SQI70734.1\|1120678_1120963_-	excisionase-like protein	H6WRW8	Salmonella_phage	3.1e-42	86.2
SQI70735.1\|1121003_1121243_-	putative bacteriophage protein	S4TR31	Salmonella_phage	2.0e-37	100.0
SQI70737.1\|1121285_1122395_-	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	7.1e-207	100.0
SQI70738.1\|1122405_1125573_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	66.9
SQI70740.1\|1125713_1126049_-	Uncharacterised protein	NA	NA	NA	NA
SQI70741.1\|1126123_1126408_-	DNA breaking-rejoining protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
SQI70743.1\|1126838_1127018_+	Uncharacterised protein	NA	NA	NA	NA
SQI70744.1\|1126962_1127151_-	Uncharacterised protein	NA	NA	NA	NA
SQI70745.1\|1127461_1127887_-	transcriptional regulator	K7PH71	Enterobacterial_phage	1.2e-13	56.3
SQI70748.1\|1127983_1128238_+	CRO	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
SQI70751.1\|1128224_1128719_+	Protein of uncharacterised function (DUF1019)	NA	NA	NA	NA
SQI70753.1\|1128765_1129773_+	replication protein	A0A0U2RT81	Escherichia_phage	1.8e-124	67.5
SQI70756.1\|1129765_1130227_+	Replication protein 14	A0A0U2JGJ0	Escherichia_phage	1.7e-66	74.2
SQI70759.1\|1130239_1130635_+	DNA-binding protein	A0A088CBK9	Shigella_phage	9.8e-18	38.8
SQI70760.1\|1130921_1132052_-	Bacteriophytochrome cph2	NA	NA	NA	NA
SQI70761.1\|1132448_1134428_+	alkyl/aryl-sulfatase BDS1	A0A2P0VMX1	Tetraselmis_virus	1.1e-162	46.3
SQI70762.1\|1135059_1135365_+	putative bacteriophage cohesive ends	NA	NA	NA	NA
SQI70763.1\|1135428_1136031_+	IrsA	A0A0U2RT94	Escherichia_phage	1.1e-92	79.9
SQI70764.1\|1136030_1136237_+	Phage protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
SQI70765.1\|1136239_1136851_+	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	2.7e-91	97.0
1136408:1136423	attR	NA	NA	NA	NA
SQI70766.1\|1136847_1136988_+	DNA breaking-rejoining protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
SQI70767.1\|1136984_1137674_+	Gifsy-1 prophage RegQ	I6PDF8	Cronobacter_phage	1.1e-59	52.4
SQI70768.1\|1138438_1138828_+	prophage membrane protein	K7PHB9	Enterobacterial_phage	8.1e-41	71.8
SQI70786.1\|1138814_1139096_+	prophage membrane protein	K7PKN9	Enterobacterial_phage	2.6e-36	80.6
SQI70789.1\|1139095_1139722_+	Phage endolysin	Q858F0	Salmonella_phage	4.6e-94	80.2
SQI70792.1\|1139718_1140255_+	protein gp55	A0A291LBG9	Klebsiella_phage	1.4e-06	46.6
SQI70813.1\|1140247_1140469_+	Uncharacterised protein	NA	NA	NA	NA
SQI70816.1\|1141119_1141665_+\|terminase	terminase	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
SQI70817.1\|1141636_1143568_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	1.8e-258	65.7
SQI70818.1\|1143551_1143755_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
SQI70821.1\|1143712_1145332_+\|portal	phage portal protein, lambda family	K7P6U7	Enterobacteria_phage	2.9e-188	62.6
SQI70823.1\|1145321_1145984_+	scaffold protein	A0A0K2FI53	Enterobacteria_phage	7.8e-68	61.0
SQI70825.1\|1146041_1146818_+	scaffold protein	O64320	Escherichia_phage	4.3e-17	40.5
SQI70828.1\|1146830_1147178_+	Head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
SQI70829.1\|1147232_1148261_+\|head	head protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
SQI70832.1\|1148318_1148678_+	DNA packaging protein	NA	NA	NA	NA
SQI70834.1\|1148688_1149066_+\|tail	tail attachment protein	K7PHD8	Enterobacteria_phage	1.0e-27	54.7
SQI70836.1\|1149052_1149631_+	Gifsy-1 prophagei VmtZ	A5LH33	Enterobacteria_phage	1.8e-81	79.7
SQI70838.1\|1149627_1150029_+\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
SQI70870.1\|1150039_1150783_+\|tail	putative tail component of prophage	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
SQI70871.1\|1150833_1151229_+\|tail	minor tail protein	A5LH36	Enterobacteria_phage	3.3e-29	55.7
SQI70872.1\|1151249_1151564_+\|tail	minor tail-like protein	A5LH37	Enterobacteria_phage	6.2e-31	63.8
SQI70873.1\|1151535_1154577_+\|tail	tail protein	A0A291AWX1	Escherichia_phage	6.2e-285	62.4
SQI70874.1\|1154579_1154909_+\|tail	tail protein	A5LH39	Enterobacteria_phage	2.1e-42	70.4
SQI70875.1\|1154918_1155617_+\|tail	Minor tail protein L	A0A1B5FP81	Escherichia_phage	1.2e-103	75.9
SQI70876.1\|1155623_1156361_+	Tail fiber component K	K7PLW1	Enterobacteria_phage	5.7e-128	84.6
SQI70877.1\|1156399_1156906_+\|tail	tail protein	A5LH42	Enterobacteria_phage	3.2e-69	79.8
SQI70878.1\|1156967_1160330_+\|tail	Phage tail fiber protein	K7PKJ2	Enterobacteria_phage	0.0e+00	80.1
SQI70879.1\|1160368_1160611_+	Uncharacterised protein	NA	NA	NA	NA
SQI70880.1\|1163357_1163876_+\|tail	Caudovirales tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	5.6e-45	51.4

DBSCAN-SWA_3

1630878 : 1639435

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI72279.1\|1630878_1631826_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	8.1e-10	27.8
SQI72280.1\|1631809_1632541_+	putative permease transmembrane component	NA	NA	NA	NA
SQI72281.1\|1632521_1632629_-	membrane protein	NA	NA	NA	NA
SQI72282.1\|1632688_1633420_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	1.4e-102	88.9
SQI72283.1\|1633642_1635328_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	3.8e-276	90.7
SQI72284.1\|1635324_1636044_+	two-component system response regulator	NA	NA	NA	NA
SQI72285.1\|1636090_1636561_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	3.0e-74	92.1
SQI72286.1\|1636702_1637161_-	lipoprotein	Q9EYF5	Enterobacteria_phage	1.2e-54	74.5
SQI72287.1\|1637401_1639435_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	4.7e-55	27.6

DBSCAN-SWA_4

1702206 : 1713721

Synechococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI72471.1\|1702206_1703610_+	Colanic acid biosynthesis protein wcaM	A0A291LBB9	Klebsiella_phage	3.4e-20	31.5
SQI72472.1\|1703761_1704757_+	udp-N-acetylglucosamine 4-epimerase	M4QPK0	Synechococcus_phage	3.3e-09	26.9
SQI72474.1\|1705001_1705895_+	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.8e-43	42.0
SQI72476.1\|1706232_1707246_+	UDP-galactose-4-epimerase	A0A2K9L1R4	Tupanvirus	1.2e-88	50.2
SQI72478.1\|1707267_1708284_+	glycosyltransferase	NA	NA	NA	NA
SQI72480.1\|1708304_1709423_+	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	6.9e-133	65.2
SQI72481.1\|1709425_1710391_+	GDP-fucose synthetase	D1LW79	Prochlorococcus_phage	6.0e-85	50.5
SQI72483.1\|1710393_1710900_+	O-antigen biosynthesis protein	NA	NA	NA	NA
SQI72485.1\|1710892_1712341_+	mannose-1-phosphate guanyltransferase	A0A1V0SH58	Hokovirus	7.2e-58	32.5
SQI72486.1\|1712344_1713721_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	2.9e-32	27.2

DBSCAN-SWA_5

1735407 : 1787753

Salmonella_phage(40.91%)

transposase,integrase

attL 1763880:1763901|attR 1790008:1790029

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI72522.1\|1735407_1736589_+\|integrase	phage integrase family protein	A0A0M4QX09	Salmonella_phage	2.5e-210	90.1
SQI72523.1\|1736937_1737177_-	putative bacteriophage protein	H6WRW9	Salmonella_phage	3.7e-36	97.5
SQI72525.1\|1737219_1737675_-	gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	6.6e-58	95.2
SQI72527.1\|1737921_1738182_+	bacteriophage protein	A0A0M4R339	Salmonella_phage	9.3e-41	97.6
SQI72528.1\|1738182_1739373_+	bacteriophage protein	A0A0M4RD32	Salmonella_phage	2.9e-198	90.7
SQI72530.1\|1739369_1739651_+	bacteriophage protein	A0A0M5M1K4	Salmonella_phage	9.7e-44	92.3
SQI72532.1\|1739619_1740051_+	bacteriophage protein	A0A0M5M1K4	Salmonella_phage	1.5e-72	96.4
SQI72534.1\|1740050_1740899_+	hypothetical prophage protein	A0A0M3ULD8	Salmonella_phage	2.5e-71	81.1
SQI72535.1\|1741376_1742456_-	Uncharacterised protein	NA	NA	NA	NA
SQI72537.1\|1743337_1743454_-	virulence protein	K7PKR6	Enterobacteria_phage	8.0e-13	94.6
SQI72539.1\|1743523_1743652_-	Uncharacterised protein	NA	NA	NA	NA
SQI72540.1\|1744053_1746330_+	thiosulfate reductase	NA	NA	NA	NA
SQI72542.1\|1746344_1746923_+	thiosulfate reductase electron transport protein PhsB	A0A077SL61	Escherichia_phage	1.5e-22	37.6
SQI72564.1\|1746919_1747684_+	thiosulfate reductase cytochrome b subunit	NA	NA	NA	NA
SQI72565.1\|1747813_1748980_+	penicillin-binding protein	B6DZZ7	Stx2-converting_phage	1.3e-198	87.1
SQI72566.1\|1749125_1749593_+	DNA gyrase inhibitor	NA	NA	NA	NA
SQI72567.1\|1749711_1750770_+	Putative inner membrane protein	NA	NA	NA	NA
SQI72568.1\|1751014_1751350_+	UPF0265 protein YeeX	NA	NA	NA	NA
SQI72569.1\|1751425_1751686_-	propanediol utilization	NA	NA	NA	NA
SQI72570.1\|1752046_1752388_+	cobyric acid synthase	NA	NA	NA	NA
SQI72571.1\|1752433_1753441_+	cobyric acid synthase	NA	NA	NA	NA
SQI72572.1\|1753463_1753589_+	adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
SQI72577.1\|1753644_1754574_+	L,D-transpeptidase	NA	NA	NA	NA
SQI72578.1\|1755279_1758180_+	Rhs family protein	NA	NA	NA	NA
SQI72579.1\|1759595_1759718_-	transcriptional regulator	NA	NA	NA	NA
SQI72580.1\|1760626_1761178_-\|integrase	bacteriophage integrase	A0A1B0VMI6	Pseudomonas_phage	7.8e-21	39.7
SQI72581.1\|1761213_1761834_-\|integrase	bacteriophage integrase	B7SYF8	Stenotrophomonas_phage	3.0e-29	42.1
SQI72582.1\|1762198_1763629_-	putative inner membrane protein	NA	NA	NA	NA
1763880:1763901	attL	NA	NA	NA	NA
SQI72583.1\|1764061_1764679_+\|integrase	bacteriophage integrase	B7SYF8	Stenotrophomonas_phage	2.3e-29	41.6
1763880:1763901	attL	NA	NA	NA	NA
SQI72584.1\|1764764_1765319_+\|integrase	bacteriophage integrase	A0A1B0VMI6	Pseudomonas_phage	8.1e-26	41.8
SQI72585.1\|1765379_1765469_-	Uncharacterised protein	NA	NA	NA	NA
SQI72586.1\|1766112_1766574_+	Uncharacterised protein	NA	NA	NA	NA
SQI72587.1\|1766570_1766693_+	transcriptional regulator	NA	NA	NA	NA
SQI72588.1\|1766974_1767529_+	Uncharacterised protein	NA	NA	NA	NA
SQI72589.1\|1767703_1768603_+\|integrase	integrase	NA	NA	NA	NA
SQI72590.1\|1768820_1769450_+	Uncharacterised protein	NA	NA	NA	NA
SQI72591.1\|1769684_1769975_-	Uncharacterised protein	NA	NA	NA	NA
SQI72592.1\|1770640_1771318_+\|integrase	integrase	Q7M297	Enterobacteria_phage	1.9e-29	39.5
1770463:1770484	attR	NA	NA	NA	NA
SQI72593.1\|1772168_1772375_-	Uncharacterised protein	NA	NA	NA	NA
1770463:1770484	attR	NA	NA	NA	NA
SQI72594.1\|1772867_1774334_+	peptidase family C69	NA	NA	NA	NA
SQI72595.1\|1775439_1775643_-	Uncharacterised protein	NA	NA	NA	NA
SQI72596.1\|1775655_1776345_-	Uncharacterised protein	NA	NA	NA	NA
SQI72597.1\|1777255_1778479_+	integral membrane transport protein	S4TR35	Salmonella_phage	6.1e-26	24.3
SQI72598.1\|1778471_1779413_+	oxaloacetate decarboxylase alpha subunit	E5EQ69	Micromonas_sp._RCC1109_virus	1.3e-20	30.0
SQI72599.1\|1779409_1780126_+	Alpha/beta hydrolase family	NA	NA	NA	NA
SQI72600.1\|1780122_1782285_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
SQI72601.1\|1782292_1782961_+	4-hydroxy-2-oxoglutarate aldolase	NA	NA	NA	NA
SQI72616.1\|1782957_1783851_+	Uncharacterised protein	NA	NA	NA	NA
SQI72621.1\|1783816_1784710_-	putative transcription regulator protein	NA	NA	NA	NA
SQI72625.1\|1784872_1785184_-\|integrase	bacteriophage integrase	A0A1B0VMI6	Pseudomonas_phage	6.3e-12	47.6
SQI72629.1\|1785188_1785425_-\|integrase	bacteriophage integrase	Q7M297	Enterobacteria_phage	3.6e-07	36.5
SQI72633.1\|1785510_1786098_-\|integrase	bacteriophage integrase	B7SYF8	Stenotrophomonas_phage	1.3e-29	42.1
SQI72638.1\|1786698_1786935_-\|transposase	transposase	NA	NA	NA	NA
SQI72641.1\|1786931_1787444_-\|transposase	transposase IS3	S5WIU1	Leptospira_phage	5.2e-11	34.0
SQI72643.1\|1787567_1787753_-\|transposase	transposase	NA	NA	NA	NA
1790008:1790029	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1868577 : 1920148

Phage_Gifsy-2(20.0%)

tail,transposase,integrase,tRNA

attL 1895241:1895256|attR 1922620:1922635

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI73172.1\|1868577_1870311_-\|tRNA	arginyl-tRNA synthetase	A0A2K9L6Z2	Tupanvirus	4.9e-85	33.4
SQI73173.1\|1870547_1871135_+	Protein yecM	NA	NA	NA	NA
SQI73174.1\|1871137_1871884_+	copper homeostasis protein CutC	NA	NA	NA	NA
SQI73175.1\|1872114_1873086_-\|tRNA	tRNA (5-methoxyuridine) 34 synthase	NA	NA	NA	NA
SQI73176.1\|1873082_1873826_-\|tRNA	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	F5B419	Synechococcus_phage	9.2e-25	30.4
SQI73177.1\|1873865_1874261_-	membrane protein	NA	NA	NA	NA
SQI73180.1\|1874508_1875327_-	Protein of uncharacterised function DUF72	Q859D1	Escherichia_coli_phage	3.4e-57	79.5
SQI73182.1\|1875323_1875890_-	putative isochorismatase hydrolase	NA	NA	NA	NA
SQI73213.1\|1876214_1877987_+\|tRNA	aspartyl-tRNA synthetase	NA	NA	NA	NA
SQI73216.1\|1878088_1878541_+	dATP pyrophosphohydrolase	NA	NA	NA	NA
SQI73238.1\|1878570_1879311_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA
SQI73241.1\|1879347_1879869_+	crossover junction endodeoxyribonuclease	G3MA90	Bacillus_virus	4.5e-10	35.1
SQI73243.1\|1879950_1880562_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA
SQI73245.1\|1880570_1881581_+	Holliday junction DNA helicase	A0A127AWE7	Bacillus_phage	2.4e-07	25.9
SQI73246.1\|1881632_1882418_-	high-affinity zinc uptake system membrane protein	NA	NA	NA	NA
SQI73247.1\|1882414_1883170_-	high-affinity zinc transporter ATPase	G3M9Y6	Bacillus_virus	3.2e-17	29.4
SQI73248.1\|1883233_1884193_+	high-affinity zinc transporter periplasmic protein	NA	NA	NA	NA
SQI73249.1\|1884208_1885528_+	Cell wall endopeptidase family M23/M37	A8ATH6	Listeria_phage	2.6e-14	40.9
SQI73250.1\|1885644_1886616_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA
SQI73252.1\|1886687_1888130_-	pyruvate kinase A	NA	NA	NA	NA
SQI73254.1\|1888253_1889123_-	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
SQI73255.1\|1889464_1890940_+	glucose 6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
SQI73262.1\|1891174_1892986_+	6-phosphogluconate dehydratase	NA	NA	NA	NA
SQI73265.1\|1893023_1893665_+	KHG/KDPG aldolase	NA	NA	NA	NA
SQI73266.1\|1893763_1894942_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
SQI73267.1\|1895073_1895364_+	DNA damage-inducible gene in SOS regulon-dependent on cyclic AMP and H-NS	NA	NA	NA	NA
1895241:1895256	attL	NA	NA	NA	NA
SQI73268.1\|1895431_1895785_+	protein YebF	NA	NA	NA	NA
SQI73269.1\|1895878_1896538_+	inner membrane protein YebE	NA	NA	NA	NA
SQI73270.1\|1896750_1898802_+	oligopeptidase	NA	NA	NA	NA
SQI73271.1\|1898837_1899536_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	4.3e-08	41.6
SQI73272.1\|1899559_1900216_-	Putative amido hydrolase	NA	NA	NA	NA
SQI73273.1\|1900322_1900553_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
SQI73274.1\|1900690_1901065_+	Copper resistance protein CopC	NA	NA	NA	NA
SQI73275.1\|1901065_1901941_+	membrane protein	NA	NA	NA	NA
SQI73276.1\|1901957_1902308_+	Putative periplasmic or exported protein	NA	NA	NA	NA
SQI73277.1\|1902674_1903076_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	4.0e-27	49.2
SQI73278.1\|1903344_1904061_+	type III secretion system effector protein	B6DZB9	Enterobacteria_phage	1.5e-19	48.4
SQI73279.1\|1904219_1904504_-	Uncharacterized HTH-type transcriptional regulator YddM	A0A2L1IV52	Escherichia_phage	4.7e-22	54.5
SQI73280.1\|1904503_1904782_-	Plasmid maintenance system killer protein	A0A2L1IV28	Escherichia_phage	1.8e-26	55.4
SQI73281.1\|1905364_1906048_-	virulence protein	Q9MBM0	Phage_Gifsy-2	3.1e-88	71.4
SQI73282.1\|1906472_1907303_+\|tail	Phage tail fiber	Q8HAB4	Salmonella_phage	1.3e-35	48.8
SQI73283.1\|1907305_1907740_+\|tail	Phage tail fiber	A0A1S6KZZ1	Salmonella_phage	1.1e-43	69.9
SQI73284.1\|1907993_1910300_+	leucine-rich repeat protein	Q9MBL9	Phage_Gifsy-2	1.3e-24	46.5
SQI73288.1\|1912077_1914189_+	SspH1	Q9MBL9	Phage_Gifsy-2	6.2e-26	46.5
SQI73308.1\|1914850_1915039_-\|transposase	transposase	NA	NA	NA	NA
SQI73309.1\|1915153_1915642_-\|transposase	transposase-like protein	NA	NA	NA	NA
SQI73310.1\|1916870_1918997_+	E3 ubiquitin-protein ligase SspH2	Q9MBL9	Phage_Gifsy-2	5.3e-57	69.9
SQI73311.1\|1919176_1920148_-\|integrase	integrase	NA	NA	NA	NA
1922620:1922635	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2841490 : 2883621

Salmonella_phage(94.0%)

protease,holin,tRNA,tail,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI76926.1\|2841490_2843020_-\|tail	Gifsy-2 prophage tail fiber protein	A0A1B0VFW4	Salmonella_phage	4.0e-83	86.6
SQI76929.1\|2843019_2843700_-	bacteriophage protein	A0A0M5M1K4	Salmonella_phage	1.1e-128	98.7
SQI76932.1\|2843696_2844896_-	bacteriophage protein	A0A0M4RD32	Salmonella_phage	1.0e-214	97.7
SQI76935.1\|2844896_2845250_-	bacteriophage protein	A0A0M4R339	Salmonella_phage	2.3e-58	96.6
SQI76939.1\|2845249_2846002_-	bacteriophage protein	A0A0M5M1K7	Salmonella_phage	1.2e-93	71.7
SQI76943.1\|2846437_2847211_-	Uncharacterised protein	NA	NA	NA	NA
SQI76944.1\|2847352_2847700_-	putative secreted protein	A0A0M4RTY3	Salmonella_phage	1.2e-22	69.2
SQI76946.1\|2847696_2848770_-	bacteriophage protein	A0A0M4QX01	Salmonella_phage	2.0e-185	92.4
SQI76949.1\|2848772_2849075_-	bacteriophage protein	A0A0M4R5B7	Salmonella_phage	2.7e-52	99.0
SQI76952.1\|2849074_2849650_-	bacteriophage protein	A0A0M3ULD5	Salmonella_phage	7.0e-97	99.5
SQI76955.1\|2849649_2851659_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	0.0e+00	99.3
SQI76960.1\|2851836_2852289_-	bacteriophage protein	A0A0M4S6U8	Salmonella_phage	5.1e-79	100.0
SQI76964.1\|2852292_2852733_-	bacteriophage protein	A0A0M5M1K6	Salmonella_phage	2.7e-77	99.3
SQI76966.1\|2852743_2853895_-	hypothetical prophage protein	A0A0M4RD26	Salmonella_phage	2.5e-215	100.0
SQI76969.1\|2853897_2854464_-	bacteriophage protein	A0A0M4R331	Salmonella_phage	5.2e-105	98.9
SQI76972.1\|2854438_2854828_-	bacteriophage protein	A0A0M3ULK0	Salmonella_phage	7.1e-69	99.2
SQI76974.1\|2854814_2855369_-	bacteriophage protein	A0A0M4S631	Salmonella_phage	4.8e-95	100.0
SQI76978.1\|2855365_2855785_-	bacteriophage protein	A0A0M5M3S2	Salmonella_phage	3.9e-73	100.0
SQI76982.1\|2855738_2856107_-	bacteriophage protein	A0A0M4RTX5	Salmonella_phage	8.7e-61	100.0
SQI76987.1\|2856148_2857090_-	bacteriophage protein	A0A0M3ULD3	Salmonella_phage	3.1e-179	100.0
SQI76988.1\|2857101_2857599_-	bacteriophage protein	A0A0M4QWZ6	Salmonella_phage	3.3e-87	98.8
SQI76989.1\|2857603_2858836_-\|head,protease	head protein/prohead protease	A0A0M4R5A6	Salmonella_phage	1.6e-228	99.5
SQI76993.1\|2858850_2859459_-	putative bacteriophage protein	A0A0M4REK0	Salmonella_phage	1.4e-111	99.5
SQI76995.1\|2859475_2860942_-	Phage-associated protein	A0A0M4S6U1	Salmonella_phage	8.9e-282	99.6
SQI76999.1\|2860941_2862564_-	gp33 TerL	A0A0M5M1R6	Salmonella_phage	0.0e+00	99.3
SQI77000.1\|2862566_2863196_-\|terminase	putative prophage terminase small subunit	A0A0M3ULJ9	Salmonella_phage	2.1e-110	99.5
SQI77004.1\|2863716_2864184_-	putative endopeptidase	A0A0M4RD57	Salmonella_phage	9.1e-71	91.5
SQI77007.1\|2864180_2864630_-	Lysozyme	A0A0M4R365	Salmonella_phage	1.3e-79	97.3
SQI77010.1\|2864616_2864967_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	7.6e-46	79.8
SQI77014.1\|2865365_2866163_-	molecular chaperone	A0A0M4S661	Salmonella_phage	6.8e-151	99.2
SQI77018.1\|2866295_2866907_-	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
SQI77022.1\|2866909_2867116_-	Phage protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
SQI77025.1\|2867115_2867718_-	bacteriophage protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
SQI77029.1\|2868051_2868291_-	Gifsy-1 prophage DinI	H6WRY5	Salmonella_phage	3.9e-38	100.0
SQI77032.1\|2868445_2868712_-	bacteriophage protein	S4TNF2	Salmonella_phage	4.4e-46	98.9
SQI77034.1\|2868810_2869620_-	Eaa protein	S4TSR6	Salmonella_phage	1.3e-157	99.6
SQI77036.1\|2869616_2870069_-	conserved hypothetical bacteriophage protein	S4TNP2	Salmonella_phage	3.8e-74	100.0
SQI77041.1\|2870065_2870467_-	Uncharacterised protein	S4TTI6	Salmonella_phage	2.9e-73	100.0
SQI77049.1\|2870463_2870811_-	DNA-binding protein	H6WRX9	Salmonella_phage	1.5e-57	98.3
SQI77122.1\|2870821_2871571_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	4.3e-139	100.0
SQI77124.1\|2871573_2872377_-	replication protein	A0A0U2RT81	Escherichia_phage	8.7e-37	83.1
SQI77126.1\|2872404_2872620_+	Uncharacterised protein	NA	NA	NA	NA
SQI77128.1\|2872914_2873235_-	repressor	A0A0M4RU01	Salmonella_phage	1.3e-52	100.0
SQI77130.1\|2873250_2873472_-	phage regulatory protein	H6WRX5	Salmonella_phage	5.3e-21	68.1
SQI77132.1\|2873594_2873993_+	DNA-binding protein	H6WRX4	Salmonella_phage	1.8e-43	68.2
SQI77138.1\|2874400_2874559_+	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	9.9e-22	98.1
SQI77139.1\|2874699_2877627_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	95.3
SQI77140.1\|2877637_2878747_+	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	1.0e-205	99.5
SQI77141.1\|2878789_2879029_+	putative bacteriophage protein	S4TR31	Salmonella_phage	2.0e-37	100.0
SQI77143.1\|2879069_2879318_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
SQI77144.1\|2879362_2880655_+	Integrase	S4TSP2	Salmonella_phage	3.4e-253	100.0
SQI77145.1\|2880849_2882052_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
SQI77147.1\|2882220_2883621_+\|tRNA	asparaginyl-tRNA synthetase	A0A2K9V902	Bandra_megavirus	1.0e-80	35.7

DBSCAN-SWA_8

2925258 : 2980323

Escherichia_phage(21.05%)

portal,transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI77280.1\|2925258_2925663_+\|transposase	transposase	NA	NA	NA	NA
SQI77285.1\|2925899_2927048_-	transport protein	NA	NA	NA	NA
SQI77287.1\|2927359_2927986_+	Nicotinamidase family protein YcaC	NA	NA	NA	NA
SQI77288.1\|2928040_2928904_-	anaerobic dimethyl sulfoxide reductase subunit C	NA	NA	NA	NA
SQI77289.1\|2928905_2929523_-	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	8.0e-75	58.6
SQI77299.1\|2929533_2931978_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.4e-223	50.5
SQI77304.1\|2932213_2933506_-\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.0e-95	48.2
SQI77305.1\|2933763_2935107_-	Holliday junction DNA helicase	G3MBE0	Bacillus_virus	2.8e-80	41.5
SQI77306.1\|2935116_2935728_-	outer-membrane lipoprotein carrier protein	NA	NA	NA	NA
SQI77310.1\|2935870_2939731_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.8e-88	49.5
SQI77312.1\|2939865_2940360_-	leucine-responsive regulatory protein	NA	NA	NA	NA
SQI77315.1\|2940907_2941876_+	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	1.1e-62	45.2
SQI77317.1\|2941990_2943757_+	cysteine/glutathione ABC transporter membrane /ATP-binding component	W8CYL7	Bacillus_phage	7.8e-22	25.1
SQI77319.1\|2943757_2945479_+	transport ATP-binding protein CydC	W8CYL7	Bacillus_phage	3.4e-14	23.9
SQI77321.1\|2945523_2946228_+\|tRNA	leucyl/phenylalanyl-tRNA-protein transferase	NA	NA	NA	NA
SQI77331.1\|2946539_2946758_+	initiation factor IF-1	NA	NA	NA	NA
SQI77335.1\|2946847_2947759_-	LysR family transcriptional regulator	NA	NA	NA	NA
SQI77343.1\|2947867_2948728_+	pirin-like protein	NA	NA	NA	NA
SQI77346.1\|2948747_2949425_+	Isochorismatase family protein	NA	NA	NA	NA
SQI77348.1\|2949851_2952128_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	3.7e-165	42.1
SQI77352.1\|2952158_2952479_-\|protease	ATP-dependent clp protease adaptor protein	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
SQI77355.1\|2952802_2953024_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
SQI77357.1\|2953162_2955109_-	ABC transporter	G9BWD6	Planktothrix_phage	1.2e-39	41.9
SQI77360.1\|2955105_2956224_-	Macrolide-specific efflux protein MacA	A0A140XAI1	Dickeya_phage	1.1e-08	38.9
SQI77363.1\|2956369_2957320_+	virK protein	NA	NA	NA	NA
SQI77366.1\|2957316_2958975_-	putative ATP-dependent endonuclease of the OLDfamily YbjD subgroup	NA	NA	NA	NA
SQI77369.1\|2959175_2960075_+	Surface protein	NA	NA	NA	NA
SQI77370.1\|2960218_2961871_+	Hydroxylamine reductase	NA	NA	NA	NA
SQI77371.1\|2961882_2962851_+	oxidoreductase	NA	NA	NA	NA
SQI77372.1\|2962977_2964696_+	pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	8.3e-29	24.3
SQI77378.1\|2964734_2965736_+	L-allo-threonine aldolase	NA	NA	NA	NA
SQI77391.1\|2965746_2967180_+	NAD dependent epimerase/dehydratase family protein	NA	NA	NA	NA
SQI77393.1\|2967275_2968289_+	oxidoreductase	NA	NA	NA	NA
SQI77394.1\|2968285_2969116_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	7.4e-07	29.9
SQI77395.1\|2969112_2969436_-	cytoplasmic protein	NA	NA	NA	NA
SQI77396.1\|2969828_2969987_+	virulence protein MsgA	K7PKR6	Enterobacteria_phage	1.5e-14	76.5
SQI77397.1\|2970484_2970619_-	Uncharacterised protein	NA	NA	NA	NA
SQI77398.1\|2970770_2970950_-	Uncharacterised protein	NA	NA	NA	NA
SQI77400.1\|2971933_2972830_+	antimicrobial resistance protein Mig-14	NA	NA	NA	NA
SQI77403.1\|2973129_2973318_-\|portal	phage portal protein, lambda family protein	NA	NA	NA	NA
SQI77406.1\|2973373_2973550_-	Uncharacterised protein	NA	NA	NA	NA
SQI77409.1\|2973536_2973773_-	exported phage protein	NA	NA	NA	NA
SQI77412.1\|2973769_2974276_-	Phage endolysin	T1SBJ3	Salmonella_phage	4.3e-74	79.6
SQI77415.1\|2975729_2976119_+	Uncharacterised protein	NA	NA	NA	NA
SQI77418.1\|2977566_2977911_-	virulence factor	A0A077SLN2	Escherichia_phage	4.5e-59	93.0
SQI77420.1\|2977977_2978076_+	Uncharacterised protein	NA	NA	NA	NA
SQI77421.1\|2978172_2978721_-	virulence protein VsdF	A0A077SLN2	Escherichia_phage	5.8e-77	77.0
SQI77422.1\|2978964_2979114_+\|transposase	transposase family protein	NA	NA	NA	NA
SQI77423.1\|2979306_2980323_-\|transposase	transposase IS116	NA	NA	NA	NA

DBSCAN-SWA_9

3346821 : 3403280

Bacillus_phage(27.27%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI78784.1\|3346821_3347739_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
SQI78786.1\|3347735_3348188_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
SQI78788.1\|3348188_3348605_-	copper efflux regulator	NA	NA	NA	NA
SQI78790.1\|3348714_3351216_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	1.5e-111	37.2
SQI78792.1\|3352350_3352830_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
SQI78794.1\|3352934_3354587_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
SQI78796.1\|3354759_3355980_+	fosmidomycin resistance protein	NA	NA	NA	NA
SQI78798.1\|3356194_3357871_+	transport protein	NA	NA	NA	NA
SQI78800.1\|3357993_3359298_-	inosine/guanosine kinase	NA	NA	NA	NA
SQI78802.1\|3359450_3360422_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	8.6e-15	27.4
SQI78804.1\|3360418_3361381_-	ferrochelatase	NA	NA	NA	NA
SQI78805.1\|3361546_3362191_-	adenylate kinase	NA	NA	NA	NA
SQI78807.1\|3362429_3364304_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	4.9e-115	36.3
SQI78809.1\|3364414_3365020_-	recombination protein RecR	NA	NA	NA	NA
SQI78811.1\|3365019_3365349_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
SQI78812.1\|3367436_3367988_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-28	45.2
SQI78814.1\|3368140_3368518_-	Inner membrane protein YbaN	NA	NA	NA	NA
SQI78816.1\|3368598_3369114_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
SQI78818.1\|3369127_3369295_+	Putative inner membrane protein	NA	NA	NA	NA
SQI78820.1\|3369364_3369958_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	5.9e-51	55.4
SQI78821.1\|3369968_3370241_+\|transposase	Putative transposase	NA	NA	NA	NA
SQI78822.1\|3370206_3373569_-	integral membrane protein AefA	NA	NA	NA	NA
SQI78823.1\|3373687_3374341_-	potential acrAB operon repressor	NA	NA	NA	NA
SQI78824.1\|3374482_3375676_+	acriflavin resistance protein A	NA	NA	NA	NA
SQI78825.1\|3375698_3378848_+	acriflavin resistance protein B	NA	NA	NA	NA
SQI78826.1\|3379345_3379720_+	Hha toxicity attenuator	NA	NA	NA	NA
SQI78827.1\|3379747_3379966_+	hemolysin expression modulating protein	NA	NA	NA	NA
SQI78828.1\|3380145_3380313_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQI78829.1\|3380406_3380697_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQI78830.1\|3380813_3381284_+	Putative inner membrane protein	NA	NA	NA	NA
SQI78831.1\|3381484_3381745_-	50S ribosomal protein L31	NA	NA	NA	NA
SQI78832.1\|3381763_3381862_-	Uncharacterised protein	NA	NA	NA	NA
SQI78835.1\|3381969_3383520_+	Uncharacterized protein ylaB	NA	NA	NA	NA
SQI78837.1\|3383828_3384140_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
SQI78857.1\|3384172_3384742_-	lipoprotein	NA	NA	NA	NA
SQI78861.1\|3384956_3385817_+	acyl-CoA thioesterase II	NA	NA	NA	NA
SQI78866.1\|3385923_3387210_-	ammonium transporter	NA	NA	NA	NA
SQI78868.1\|3387241_3387580_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
SQI78874.1\|3387791_3389573_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	1.2e-38	26.9
SQI78877.1\|3389565_3391338_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	1.2e-49	29.4
SQI78883.1\|3391378_3391837_-	transcriptional regulator	NA	NA	NA	NA
SQI78888.1\|3391949_3393005_+	lyase	NA	NA	NA	NA
SQI78893.1\|3393120_3393579_-\|transposase	transposase for IS200	I4AZI8	Saccharomonospora_phage	5.9e-14	31.5
SQI78896.1\|3393766_3394585_-	HMP-PP phosphatase	NA	NA	NA	NA
SQI78899.1\|3394685_3396386_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQI78907.1\|3396450_3397146_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-86	68.0
SQI78930.1\|3397254_3397653_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
SQI78941.1\|3397758_3398133_-	competence protein ComEA	NA	NA	NA	NA
SQI78944.1\|3398282_3400154_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
SQI78947.1\|3400444_3400717_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.1e-20	58.4
SQI78954.1\|3400925_3403280_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	7.2e-225	52.5

DBSCAN-SWA_10

3948539 : 3963405

Enterobacteria_phage(45.45%)

capsid,integrase

attL 3945015:3945029|attR 3953359:3953373

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3945015:3945029	attL	NA	NA	NA	NA
SQI80777.1\|3948539_3949796_-\|integrase	phage integrase family site-specific recombinase	B7SYF8	Stenotrophomonas_phage	2.8e-82	43.4
SQI80780.1\|3950491_3950833_-	Uncharacterised protein	NA	NA	NA	NA
SQI80783.1\|3950840_3951245_-	Uncharacterised protein	NA	NA	NA	NA
SQI80787.1\|3951256_3952633_-	Uncharacterised protein	NA	NA	NA	NA
SQI80791.1\|3952732_3955066_-	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
3953359:3953373	attR	NA	NA	NA	NA
SQI80795.1\|3955080_3955401_-	putative prophage protein	NA	NA	NA	NA
SQI80799.1\|3955397_3955625_-	bacteriophage protein	NA	NA	NA	NA
SQI80801.1\|3956166_3956433_-	phage DNA binding protein	Q7M299	Enterobacteria_phage	2.6e-30	71.6
SQI80804.1\|3956972_3957710_+\|capsid	bacteriophage capsid protein	Q7M2A2	Enterobacteria_phage	2.4e-81	65.3
SQI80807.1\|3957706_3957952_+	phage transcriptional activator, Ogr/delta	Q7M294	Enterobacteria_phage	6.3e-31	76.5
SQI80810.1\|3957968_3958535_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.5e-54	60.5
SQI80814.1\|3958754_3959318_-	type II restriction endonuclease PvuII	A0A1B0UXL9	Roseobacter_phage	4.2e-30	42.9
SQI80817.1\|3959606_3960602_+	DNA methyltransferase	S0A236	Cellulophaga_phage	5.9e-19	24.2
SQI80821.1\|3960655_3961240_-	Integrase	B7SYF8	Stenotrophomonas_phage	4.2e-33	46.9
SQI80825.1\|3961239_3961917_-	Integrase	E5AGD0	Erwinia_phage	4.9e-25	38.3
SQI80828.1\|3962385_3963405_+	zinc-type alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	3.2e-44	31.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage