CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483477	Salmonella enterica subsp. salamae strain NCTC10310 genome assembly, chromosome: 1	3 crisprs	PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	1	57	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483477_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483477_2

1014234-1015485

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCTAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CRT

20 spacers

cas3,cas8e

The CRISPR arrays of LS483477_2

>merge|LS483477|2|1014234-1015485|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCTAGCGGGGATAAACCGCAGGTCGCACGCTGCGGTAACGCTGTTCCCCCGTGTTCCCCGCGCTAGCGGGGATAAACCGTGCGCACAAGTGAATCTCTTTGCTGCTGCGCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCTCATTAGCTGGGCGGCGGCGTTCTCCGCCTCGTGTTCCCCGCGCTAGCGGGGATAAACCGCGTCTGCTCGCGAGCGGGTATAATCGCACTACGTGTTCCCCGCGCTAGCGGGGATAAACCGGCACACGGAACGGGTTATTCGTACAGAAATCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCTGCCCCTGCGGACTGCTCAGACTGGTACTCAGTGTTCCCCGCGCTAGCGGGGATAAACCGTGTTTCTGATGCCCTTAATCCAAAACACAGCAGTGTTCCCCGCGCTAGCGGGGATAAACCGGGACGCTGGCATATACCAGCACCATGACATAGGTGTTCCCCGCGCTAGCGGGGATAAACCGGCGGTGCGGCATGAGCAATACATTTTTTATCAGTGTTCCCCGCGCTAGCGGGGATAAACCGAGTGGTGCGCACCGTAAATACTACAAATCATTGTGTTCCCCGCGCTAGCGGGGATAAACCGCGCCCCCGGTTAGTTGTTCACTGCGCTGGAAAGTGTTCCCCGCGCTAGCGGGGATAAACCGCGGCGTATCTGGGGCCGGACGGCACGCTGCCAGCGTGTTCCCCGCGCTAGCGGGGATAAACCGAATTAATTTAATCACGCCAGCCTCACAATATAGTGTTCCCCGCGCTAGCGGGGATAAACCGTTGACCACAACGAATACACAGGGAACGGCGTAGTGTTCCCCGCGCTAGCGGGGATAAACCGGTAACGTTGCCGTTCTCTACGATATTGACCTGGTGTTCCCCGCGCTAGCGGGGATAAACCGCCGATTCACCAGTTCACGCTCTCGATCATGCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCTTTCCGGTAGAGCGGAATTGAGAATGCTTCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCTGGGTCTTGGTTTCGACGTTGTAGCGAATAGCGTGTTCCCCGCGCTAGCGGGGATAAACCGAATGGCGGAAATAGACGCACGCGGACCCGGTAGTGTTCCCCGCGCTAGCGGGGATAAACCCTGTATGTCGTTAATATGGGGATCGCTGAGGTCGTGTCCCCCGCGCCAGCGGGGATAGCCGT

>LS483477|2|1|1014234-1015424|PILER-CR
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGCACGCTGCGGTAACGCTGTTCCCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGCACAAGTGAATCTCTTTGCTGCTGCGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTAGCTGGGCGGCGGCGTTCTCCGCCTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCTGCTCGCGAGCGGGTATAATCGCACTAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCACACGGAACGGGTTATTCGTACAGAAATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGCCCCTGCGGACTGCTCAGACTGGTACTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGTTTCTGATGCCCTTAATCCAAAACACAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGACGCTGGCATATACCAGCACCATGACATAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGTGCGGCATGAGCAATACATTTTTTATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGTGGTGCGCACCGTAAATACTACAAATCATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCCCCCGGTTAGTTGTTCACTGCGCTGGAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGGCGTATCTGGGGCCGGACGGCACGCTGCCAGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AATTAATTTAATCACGCCAGCCTCACAATATA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGACCACAACGAATACACAGGGAACGGCGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTAACGTTGCCGTTCTCTACGATATTGACCTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGATTCACCAGTTCACGCTCTCGATCATGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTTCCGGTAGAGCGGAATTGAGAATGCTTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGGGTCTTGGTTTCGACGTTGTAGCGAATAGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AATGGCGGAAATAGACGCACGCGGACCCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCC

>LS483477|2|2|1014234-1015485|CRISPRCasFinder
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGCACGCTGCGGTAACGCTGTTCCCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGCACAAGTGAATCTCTTTGCTGCTGCGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTAGCTGGGCGGCGGCGTTCTCCGCCTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCTGCTCGCGAGCGGGTATAATCGCACTAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCACACGGAACGGGTTATTCGTACAGAAATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGCCCCTGCGGACTGCTCAGACTGGTACTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGTTTCTGATGCCCTTAATCCAAAACACAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGACGCTGGCATATACCAGCACCATGACATAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGTGCGGCATGAGCAATACATTTTTTATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGTGGTGCGCACCGTAAATACTACAAATCATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCCCCCGGTTAGTTGTTCACTGCGCTGGAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGGCGTATCTGGGGCCGGACGGCACGCTGCCAGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AATTAATTTAATCACGCCAGCCTCACAATATA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGACCACAACGAATACACAGGGAACGGCGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTAACGTTGCCGTTCTCTACGATATTGACCTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGATTCACCAGTTCACGCTCTCGATCATGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTTCCGGTAGAGCGGAATTGAGAATGCTTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGGGTCTTGGTTTCGACGTTGTAGCGAATAGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AATGGCGGAAATAGACGCACGCGGACCCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCC	TGTATGTCGTTAATATGGGGATCGCTGAGGTC
GTGTCCCCCGCGCCAGCGGGGATAGCCGT

>LS483477|2|1|1014234-1015485|CRT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGCACGCTGCGGTAACGCTGTTCCCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGCACAAGTGAATCTCTTTGCTGCTGCGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTAGCTGGGCGGCGGCGTTCTCCGCCTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCTGCTCGCGAGCGGGTATAATCGCACTAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCACACGGAACGGGTTATTCGTACAGAAATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGCCCCTGCGGACTGCTCAGACTGGTACTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGTTTCTGATGCCCTTAATCCAAAACACAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGACGCTGGCATATACCAGCACCATGACATAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGTGCGGCATGAGCAATACATTTTTTATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGTGGTGCGCACCGTAAATACTACAAATCATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCCCCCGGTTAGTTGTTCACTGCGCTGGAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGGCGTATCTGGGGCCGGACGGCACGCTGCCAGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AATTAATTTAATCACGCCAGCCTCACAATATA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGACCACAACGAATACACAGGGAACGGCGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTAACGTTGCCGTTCTCTACGATATTGACCTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGATTCACCAGTTCACGCTCTCGATCATGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTTCCGGTAGAGCGGAATTGAGAATGCTTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGGGTCTTGGTTTCGACGTTGTAGCGAATAGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AATGGCGGAAATAGACGCACGCGGACCCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCC	TGTATGTCGTTAATATGGGGATCGCTGAGGTC
GTGTCCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
LS483477.1\|SQI68183.1\|1022945_1025642_-\|helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LS483477.1\|SQI68168.1\|999988_1001329_+\|glucarate-dehydratase-1	unknown	unknown	gnl\|CDD\|211799
LS483477.1\|SQI68175.1\|1011830_1013129_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483477.1\|SQI68185.1\|1026115_1026457_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|227028
LS483477.1\|SQI68172.1\|1006782_1009017_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LS483477.1\|SQI68167.1\|998627_999968_+\|glucarate-dehydratase-2	unknown	unknown	gnl\|CDD\|211799
LS483477.1\|SQI68182.1\|1021608_1022562_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483477.1\|SQI68171.1\|1005435_1006731_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	gnl\|CDD\|237291
LS483477.1\|SQI68170.1\|1002621_1005378_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	unknown	unknown	gnl\|CDD\|236848
LS483477.1\|SQI68179.1\|1017259_1019059_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LS483477.1\|SQI68176.1\|1013265_1013937_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LS483477.1\|SQI68177.1\|1015582_1016380_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LS483477.1\|SQI68178.1\|1016469_1016832_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LS483477.1\|SQI68173.1\|1009091_1009883_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LS483477.1\|SQI68174.1\|1010110_1011748_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LS483477.1\|SQI68169.1\|1001406_1002549_+\|Glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
LS483477.1\|SQI68181.1\|1020786_1021521_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483477.1\|SQI68180.1\|1019058_1020771_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LS483477.1\|SQI68186.1\|1026811_1028347_+\|CRISPR-associated-protein-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483477.1\|SQI68184.1\|1025806_1026106_-\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775

Protein	Function_ID	Function_description	E-value
LS483477.1\|SQI68183.1\|1022945_1025642_-\|helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.52587e-143
LS483477.1\|SQI68168.1\|999988_1001329_+\|glucarate-dehydratase-1	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
LS483477.1\|SQI68175.1\|1011830_1013129_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483477.1\|SQI68185.1\|1026115_1026457_-\|diaminopimelate-decarboxylase	gnl\|CDD\|227028	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown].	2.32392e-43
LS483477.1\|SQI68172.1\|1006782_1009017_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LS483477.1\|SQI68167.1\|998627_999968_+\|glucarate-dehydratase-2	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
LS483477.1\|SQI68182.1\|1021608_1022562_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483477.1\|SQI68171.1\|1005435_1006731_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LS483477.1\|SQI68170.1\|1002621_1005378_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
LS483477.1\|SQI68179.1\|1017259_1019059_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LS483477.1\|SQI68176.1\|1013265_1013937_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.3296e-155
LS483477.1\|SQI68177.1\|1015582_1016380_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.9532e-98
LS483477.1\|SQI68178.1\|1016469_1016832_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LS483477.1\|SQI68173.1\|1009091_1009883_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	6.07709e-157
LS483477.1\|SQI68174.1\|1010110_1011748_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LS483477.1\|SQI68169.1\|1001406_1002549_+\|Glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
LS483477.1\|SQI68181.1\|1020786_1021521_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.64861e-136
LS483477.1\|SQI68180.1\|1019058_1020771_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483477.1\|SQI68186.1\|1026811_1028347_+\|CRISPR-associated-protein-Cse1-family	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
LS483477.1\|SQI68184.1\|1025806_1026106_-\|Cro/Cl-family-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	6.99251e-10

>LS483477.1|SQI68176.1|1013265_1013937_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDVEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483477.1|SQI68175.1|1011830_1013129_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LS483477.1|SQI68174.1|1010110_1011748_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>LS483477.1|SQI68173.1|1009091_1009883_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MNQIDRLLNIMQRLRDPEGGCPWDKEQTFASIAPCTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELCADNSEEVLARWEQIKTEERAQKAQHSALDDIPRNFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LS483477.1|SQI68172.1|1006782_1009017_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGHLRAEMKNEGVMAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGN
>LS483477.1|SQI68171.1|1005435_1006731_+|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MAQFYSAKRRVTTRQIITVKVNDLDPFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIALQQSSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLVPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQSWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>LS483477.1|SQI68170.1|1002621_1005378_-|BarA-sensory-histidine-kinase-(VarS-/-GacS)
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESVIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHAEPLLMDASKIAMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>LS483477.1|SQI68169.1|1001406_1002549_+|Glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVDVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISSLDKRLSACRIDVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALIRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEERLADADLVITGEGRIDSQTIHGKVPIGVANIAKRHNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALENAAENVRMTARNVAATLKIGSLLR
>LS483477.1|SQI68168.1|999988_1001329_+|glucarate-dehydratase-1
MSAQFTTPVVTSMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDEQCDWYRLRHEEAMTPETVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAKRFPNARVTLDPNGAWSLNEAINIGRYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPTKPGLGVELDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR
>LS483477.1|SQI68167.1|998627_999968_+|glucarate-dehydratase-2
MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGVGEAPGGEVIYQTLVDAIPTVLGQEVARLNSVVQRVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGQALNVPVCELLGPGKQRDVVTVLGYLFYIGDRAKTDLPYLESTPGSHEWYRLRHQEALNSDAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPDARITVDPNGAWLLDEAIALCKGLNDVLAYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGKPTAIDTHWIWQEGDCRLTKNPLEIKNGTIAVPDAPGLGVELDWEQVRKAHDAYKKLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH
>LS483477.1|SQI68177.1|1015582_1016380_+|beta-lactamase
MALTIRVLLENHKGAGADKSLRARPGLSLLVQDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPHNSRIICHPDIARERYAAMTFLGITRRIKKLSREVDYSRYRMVYTRDPLPIGENFIWSGEIPVVVPETYGIVGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPLTLWRVRRFLQEQKTEKLCGCHCTGVWGRLWLPEITAPATGDVLRF
>LS483477.1|SQI68178.1|1016469_1016832_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LS483477.1|SQI68179.1|1017259_1019059_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMTGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPTLNDTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAVNEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEALQWHCELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPSQLDADALVGLLRPLTPRLYSIASSQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRIEEDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAEDAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LS483477.1|SQI68180.1|1019058_1020771_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWFDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLSVASVPESQKAKIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEAVMTKHGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LS483477.1|SQI68181.1|1020786_1021521_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNVLNDLPKVDRILALAEANAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLINQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWDHGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483477.1|SQI68182.1|1021608_1022562_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHHNYTLNESRLAHLLSADKEKAIHMGKWDKVQDHFRAEKKDHALDVLYAIIHGQGRGEPGEMEVNVEDMGKIYAFKRLQHLACPAHQDLFNIKMDASQTQFLFMVGDTVISQSKIQDILNISDNAMVASMSREERQLFLRICEMIGATMTWHPELLQGSVSTLRKEVTSNVQIKAAVYEMMRPAEAPDHQFIEWQDTLTENEKSMLACINAGNFDTITQFCKIGYREVQGEVAFSMVHPCISYLLHTYSPFAEFKETNAGFLNKLNQDYNDYHTNKMFIDVILENIYLTHERSLHIGKNGCSRNILLA
>LS483477.1|SQI68183.1|1022945_1025642_-|helicase-Cas3
MMAGNLNYLRYWGKTNKSSTNTTNPYHLLAYHCLDVAACGYYIIKNNVFGTRDILQKCGITETDAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVPPVNGVSAFERHDSLGFYLWGKLLEAWGEGHNEIIAGVEPENRARFESALNIWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVILADWMGSDESQFPLFSSAMPLNDYWPLACEKAQRAISTIPPLSQHSHYQSHQALFPFIETLTPLQQLANTLDISAHGPHLVILEDVTGAGKTEAALILTHRLMSTNKGHGLYVGLPTMATANAMYKRLAAAYRALFADNSRPSLILAHGGREMSDAFRQSIWQPVGGTAEDYARDDGNSVSECHAWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPDQDLLLFHSRFAFTDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDDRQPPVLHILAPHWQEQAEEGWLGQELKGTGYVYADHACLWRTQALLRQYGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVSFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRYHRPSGQIVLVSDTGEASYYSKRFGLVG
>LS483477.1|SQI68184.1|1025806_1026106_-|Cro/Cl-family-transcriptional-regulator
MATLKELMAKQTPESQQRIAAKVEEMRQTIALNRLREELNMSQTEMAAAMGVKQPTVAKMEQADNDPRLSTLKRYVAALGGELSIDVKLPTGKRIAFLI
>LS483477.1|SQI68185.1|1026115_1026457_-|diaminopimelate-decarboxylase
MWDVETTDVFDEWFAAQADVLKEDLLAAMIILSEQGPQLGRPYADTVNGSSFSNMKELRIQHQGNPIRAFFAFDPSRHGIVLCAGDKTGLNEKRFYRDMIKLADAEYRKHLNK
>LS483477.1|SQI68186.1|1026811_1028347_+|CRISPR-associated-protein-Cse1-family
MDLTREKWLPVIFSSGEKAKISLLDLLDNRIQDVAFPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWSDGIEPEQWEKALKSLSLALQFGEQKPSFLQSFDSLDSEYGSIAGLLVDAPGGNTLKLNKDHFVKRGNVERICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKFPLWKKLWLNVLPQEEVPTATQYPLIFPWLAPTKTSEKAGNVVTPENAHPLQAYWGMPRRIELDFSHTVAGICDLCGEHHELLLLQMRSKNYGVQYDGWLHPFSPYRQAVKDPSSPWLALKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDNAKARCWYQHRIPLISVSHEEQFLAALNAVLVLASEALSLLRNALKSAKFDCPKEAKMDFSMVDIAFWLETEPAFRTLQEALVVDPLRQNTLTHSAVRQWERELTHYLFHVFDRDALTNPDCPDDILLRQLTARQDLASSYRKHKARKDVLALVE

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Crispr_ID: LS483477_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483477_3

1032784-1035130

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

38 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LS483477_3

>merge|LS483477|3|1032784-1035130|CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTGTAGCCGTCATATGCTGGGAATGTCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCACGGAAGTGATTGCCACTTCGGTGATTTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCAGCGCACAGGGCGTTTGGATTTTTCTTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAGCTGGATCACCCGTATCGTTGATCCAGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTCGTTTGAACCAGTTGATGCAGAAGTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAAGCCGCAGCCAGGCGTATCAGGGAGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCCGCATCAGCATCATCAGCCACGGCAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGAAACCGGCAGGCTTTCCGCTCTTGCCGCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGATGCCATCATGGTAATTGCCCACAATAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATATCAGACGCTTACTCCCCGGCTCCGGCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCATGGTTATTGTCTGTGGCTACGACAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTCCGGAAAAGTGTGGATTCGACAGGCTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAACCGTAAACCCGGCATCACGGAGCGCAGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATTTATCAACCTCTGCATAGGTTTCCAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATGCTCATCGATGTGGTGCCAGTCACTTAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCATTCCAAACCCTTTGGAGTCAGTATGGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGATATTGCTAGTCGTTTTGATGAGGCTGACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTCTCATTTTTTCCTGAATTTCAGCAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGGTGTACCTGCCCGAATTCAATCGCGCAATGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATGATTCAGGAAAACAAACTGCCTGTAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGGGTATCAGGGCGGGCGTATTCGCAACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTATTTAAAATATAAACATTTATATTAATTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACTGACCATTACAGCAGCAGCGGTGATCACGTGTTCCCCGCGCCAGCGGGGATAAACCGTCATCCCCTCCCCATTCGAGCTCGTCAATGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTGGTAACAGGTTGGGTTGCGTATTAGAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTTGTTTGTCGCGGGATTCAGCCTGGCTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATATGACTTTATCTAGATCGCGATTCTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCATCTGGATCAGATGATGGCTCAGCTCAAGTGTTCCCCGCGCCAGCGGGGATAAACCATAAACATTGTGCAGCTAGAGTTACCATATTGCGTGTTCCCCGCGCCAGCGGGGATAAACCCAAACAACTCTTCAAGATGTTCAGCGGTGATGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTAACCGCCAACGAAAAGGCGGTTTATCTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTGTGGGATGAATATCTCTCGTCGCAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCCCCAGCTCCGTCAATGATTACGTATGGATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAGAACGTTGGTAGTGTTAACTATAAAATGGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTGCGTCTTGGCGACAATTTAATGTACGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGGTTTTAACCCACTGCTAGTAAAACGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCGCGCCAATCCGCCTTCGGTGCGTATCACGTGTTCCCCGCGTCAGCGGGGATAAACCGAATACGCAAAGCTGATTTTGTCGAACAGTGCGGTGTTCCCCGCGTCAGCGGGGATAAACGC

>LS483477|3|3|1032784-1035130|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGTAGCCGTCATATGCTGGGAATGTCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACGGAAGTGATTGCCACTTCGGTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAGCGCACAGGGCGTTTGGATTTTTCTTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGCTGGATCACCCGTATCGTTGATCCAGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCGTTTGAACCAGTTGATGCAGAAGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAAGCCGCAGCCAGGCGTATCAGGGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCCGCATCAGCATCATCAGCCACGGCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAACCGGCAGGCTTTCCGCTCTTGCCGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGATGCCATCATGGTAATTGCCCACAATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATATCAGACGCTTACTCCCCGGCTCCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCATGGTTATTGTCTGTGGCTACGACAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTCCGGAAAAGTGTGGATTCGACAGGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAACCGTAAACCCGGCATCACGGAGCGCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATTTATCAACCTCTGCATAGGTTTCCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGCTCATCGATGTGGTGCCAGTCACTTAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCAAACCCTTTGGAGTCAGTATGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGATATTGCTAGTCGTTTTGATGAGGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTCTCATTTTTTCCTGAATTTCAGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGTGTACCTGCCCGAATTCAATCGCGCAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATGATTCAGGAAAACAAACTGCCTGTAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGGGTATCAGGGCGGGCGTATTCGCAACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATTTAAAATATAAACATTTATATTAATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACTGACCATTACAGCAGCAGCGGTGATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATCCCCTCCCCATTCGAGCTCGTCAATGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTGGTAACAGGTTGGGTTGCGTATTAGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTGTTTGTCGCGGGATTCAGCCTGGCTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATATGACTTTATCTAGATCGCGATTCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCATCTGGATCAGATGATGGCTCAGCTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAACATTGTGCAGCTAGAGTTACCATATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AAACAACTCTTCAAGATGTTCAGCGGTGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAACCGCCAACGAAAAGGCGGTTTATCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTGTGGGATGAATATCTCTCGTCGCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCCAGCTCCGTCAATGATTACGTATGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGAACGTTGGTAGTGTTAACTATAAAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTGCGTCTTGGCGACAATTTAATGTACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGGTTTTAACCCACTGCTAGTAAAACGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGCGCCAATCCGCCTTCGGTGCGTATCAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AATACGCAAAGCTGATTTTGTCGAACAGTGCG
GTGTTCCCCGCGTCAGCGGGGATAAACGC

>LS483477|3|2|1032784-1035130|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGTAGCCGTCATATGCTGGGAATGTCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACGGAAGTGATTGCCACTTCGGTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAGCGCACAGGGCGTTTGGATTTTTCTTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGCTGGATCACCCGTATCGTTGATCCAGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCGTTTGAACCAGTTGATGCAGAAGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAAGCCGCAGCCAGGCGTATCAGGGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCCGCATCAGCATCATCAGCCACGGCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAACCGGCAGGCTTTCCGCTCTTGCCGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGATGCCATCATGGTAATTGCCCACAATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATATCAGACGCTTACTCCCCGGCTCCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCATGGTTATTGTCTGTGGCTACGACAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTCCGGAAAAGTGTGGATTCGACAGGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAACCGTAAACCCGGCATCACGGAGCGCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATTTATCAACCTCTGCATAGGTTTCCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGCTCATCGATGTGGTGCCAGTCACTTAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCAAACCCTTTGGAGTCAGTATGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGATATTGCTAGTCGTTTTGATGAGGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTCTCATTTTTTCCTGAATTTCAGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGTGTACCTGCCCGAATTCAATCGCGCAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATGATTCAGGAAAACAAACTGCCTGTAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGGGTATCAGGGCGGGCGTATTCGCAACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATTTAAAATATAAACATTTATATTAATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACTGACCATTACAGCAGCAGCGGTGATCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATCCCCTCCCCATTCGAGCTCGTCAATGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTGGTAACAGGTTGGGTTGCGTATTAGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTGTTTGTCGCGGGATTCAGCCTGGCTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATATGACTTTATCTAGATCGCGATTCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCATCTGGATCAGATGATGGCTCAGCTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAACATTGTGCAGCTAGAGTTACCATATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AAACAACTCTTCAAGATGTTCAGCGGTGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTAACCGCCAACGAAAAGGCGGTTTATCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTGTGGGATGAATATCTCTCGTCGCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCCAGCTCCGTCAATGATTACGTATGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGAACGTTGGTAGTGTTAACTATAAAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTGCGTCTTGGCGACAATTTAATGTACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGGTTTTAACCCACTGCTAGTAAAACGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGCGCCAATCCGCCTTCGGTGCGTATCAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AATACGCAAAGCTGATTTTGTCGAACAGTGCG
GTGTTCCCCGCGTCAGCGGGGATAAACGC

Protein	Signature genes	Signature genes Name	Protein_function
LS483477.1\|SQI68197.1\|1038786_1039392_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LS483477.1\|SQI68187.1\|1028363_1028966_+\|CRISPR-associated-protein-Cse2-family	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
LS483477.1\|SQI68186.1\|1026811_1028347_+\|CRISPR-associated-protein-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483477.1\|SQI68191.1\|1031485_1032403_+\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LS483477.1\|SQI68185.1\|1026115_1026457_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|227028
LS483477.1\|SQI68198.1\|1039442_1039766_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LS483477.1\|SQI68189.1\|1030056_1030782_+\|CRISPR-associated-protein-Cas5	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
LS483477.1\|SQI68200.1\|1040286_1040997_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LS483477.1\|SQI68188.1\|1028988_1030047_+\|CRISPR-associated-protein,-Cse4-family	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LS483477.1\|SQI68183.1\|1022945_1025642_-\|helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LS483477.1\|SQI68192.1\|1032405_1032699_+\|putative-ssRNA-endonuclease	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
LS483477.1\|SQI68195.1\|1036442_1037351_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LS483477.1\|SQI68203.1\|1042502_1043264_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LS483477.1\|SQI68190.1\|1030781_1031486_+\|CRISPR-associated-protein,-Cse3-family-protein	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
LS483477.1\|SQI68196.1\|1037360_1038800_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LS483477.1\|SQI68199.1\|1039956_1040268_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LS483477.1\|SQI68202.1\|1041472_1042522_+\|tRNA-pseudouridine-13-synthase	unknown	unknown	gnl\|CDD\|234884
LS483477.1\|SQI68201.1\|1040996_1041476_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LS483477.1\|SQI68194.1\|1035144_1036191_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LS483477.1\|SQI68184.1\|1025806_1026106_-\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775

Protein	Function_ID	Function_description	E-value
LS483477.1\|SQI68197.1\|1038786_1039392_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.22548e-144
LS483477.1\|SQI68187.1\|1028363_1028966_+\|CRISPR-associated-protein-Cse2-family	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	7.08115e-37
LS483477.1\|SQI68186.1\|1026811_1028347_+\|CRISPR-associated-protein-Cse1-family	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
LS483477.1\|SQI68191.1\|1031485_1032403_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.06217e-157
LS483477.1\|SQI68185.1\|1026115_1026457_-\|diaminopimelate-decarboxylase	gnl\|CDD\|227028	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown].	2.32392e-43
LS483477.1\|SQI68198.1\|1039442_1039766_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.36723e-48
LS483477.1\|SQI68189.1\|1030056_1030782_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	9.15654e-47
LS483477.1\|SQI68200.1\|1040286_1040997_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	5.4788e-119
LS483477.1\|SQI68188.1\|1028988_1030047_+\|CRISPR-associated-protein,-Cse4-family	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.31105e-120
LS483477.1\|SQI68183.1\|1022945_1025642_-\|helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.52587e-143
LS483477.1\|SQI68192.1\|1032405_1032699_+\|putative-ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	5.89291e-65
LS483477.1\|SQI68195.1\|1036442_1037351_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483477.1\|SQI68203.1\|1042502_1043264_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.90053e-147
LS483477.1\|SQI68190.1\|1030781_1031486_+\|CRISPR-associated-protein,-Cse3-family-protein	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	8.9615e-75
LS483477.1\|SQI68196.1\|1037360_1038800_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483477.1\|SQI68199.1\|1039956_1040268_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	9.72909e-65
LS483477.1\|SQI68202.1\|1041472_1042522_+\|tRNA-pseudouridine-13-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LS483477.1\|SQI68201.1\|1040996_1041476_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.03575e-103
LS483477.1\|SQI68194.1\|1035144_1036191_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LS483477.1\|SQI68184.1\|1025806_1026106_-\|Cro/Cl-family-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	6.99251e-10

>LS483477.1|SQI68192.1|1032405_1032699_+|putative-ssRNA-endonuclease
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGENRRIPVDLDGLRLVSFLPVANQ
>LS483477.1|SQI68191.1|1031485_1032403_+|CRISPR-associated-protein-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVALGDSGHRSN
>LS483477.1|SQI68190.1|1030781_1031486_+|CRISPR-associated-protein,-Cse3-family-protein
MYLSRIQLRFNNLRPEMLEKWNSARPYASHQWLWQLFPEQESRQFLFREEAQGGFFMLSAIPPLAQHPLFLVETKPFNPQLTNGVVLDFQLRANPVITRNGKRSDVMMDAKYQAKAKGIVQEGWWELQQQSAQIWLEKQGQQHGFRLLTEVTDDFALWAGAEYSERQARCGCVQAYQQHRFVRNDQEKPIVFSSVDFSGTLCITDAPQFEKALFSGLGKSKALGCGMLMVKRKR
>LS483477.1|SQI68189.1|1030056_1030782_+|CRISPR-associated-protein-Cas5
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRREEEARLNNFNQHYHLAVHALACSDRWLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTKAVKEISAAELSGFTLREGVCYWDDPDEESLVWQQKQHSNNQPVSRLRWQFCGYTRFSGLLQERT
>LS483477.1|SQI68188.1|1028988_1030047_+|CRISPR-associated-protein,-Cse4-family
MTTFIQLHLLTAYAPANLNRDESGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEEAMDGFMGKRTRRIGVDYVYRPMIAAGVTEKTAKSAAEKIAAQFGKLKSDKNAPDEKKLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRAIAALTETALTVSPTGKQNSFASRAYATYAMAEMGKKQPRSLAAAFFQPVRDTDQIPAAIACLKQQRDSFDSVYGSCADNCCELNVQEGTGSLAELLAFVSQ
>LS483477.1|SQI68187.1|1028363_1028966_+|CRISPR-associated-protein-Cse2-family
MLNSNTAALCRILNSDAQKALLDWFATLSERYDRKDDKRINGRAWRAELKRMTPPYGVMMCEGYDALRQALTKHMRLQPLDEMALALFVSVAVHIKSHKEKISFAAQLGEKLNGSTPCVSALRFERLQKASDPETFCQLLIQVVKIRGTDGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRTRWANEYLSTSRGK
>LS483477.1|SQI68186.1|1026811_1028347_+|CRISPR-associated-protein-Cse1-family
MDLTREKWLPVIFSSGEKAKISLLDLLDNRIQDVAFPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWSDGIEPEQWEKALKSLSLALQFGEQKPSFLQSFDSLDSEYGSIAGLLVDAPGGNTLKLNKDHFVKRGNVERICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKFPLWKKLWLNVLPQEEVPTATQYPLIFPWLAPTKTSEKAGNVVTPENAHPLQAYWGMPRRIELDFSHTVAGICDLCGEHHELLLLQMRSKNYGVQYDGWLHPFSPYRQAVKDPSSPWLALKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDNAKARCWYQHRIPLISVSHEEQFLAALNAVLVLASEALSLLRNALKSAKFDCPKEAKMDFSMVDIAFWLETEPAFRTLQEALVVDPLRQNTLTHSAVRQWERELTHYLFHVFDRDALTNPDCPDDILLRQLTARQDLASSYRKHKARKDVLALVE
>LS483477.1|SQI68185.1|1026115_1026457_-|diaminopimelate-decarboxylase
MWDVETTDVFDEWFAAQADVLKEDLLAAMIILSEQGPQLGRPYADTVNGSSFSNMKELRIQHQGNPIRAFFAFDPSRHGIVLCAGDKTGLNEKRFYRDMIKLADAEYRKHLNK
>LS483477.1|SQI68184.1|1025806_1026106_-|Cro/Cl-family-transcriptional-regulator
MATLKELMAKQTPESQQRIAAKVEEMRQTIALNRLREELNMSQTEMAAAMGVKQPTVAKMEQADNDPRLSTLKRYVAALGGELSIDVKLPTGKRIAFLI
>LS483477.1|SQI68183.1|1022945_1025642_-|helicase-Cas3
MMAGNLNYLRYWGKTNKSSTNTTNPYHLLAYHCLDVAACGYYIIKNNVFGTRDILQKCGITETDAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVPPVNGVSAFERHDSLGFYLWGKLLEAWGEGHNEIIAGVEPENRARFESALNIWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVILADWMGSDESQFPLFSSAMPLNDYWPLACEKAQRAISTIPPLSQHSHYQSHQALFPFIETLTPLQQLANTLDISAHGPHLVILEDVTGAGKTEAALILTHRLMSTNKGHGLYVGLPTMATANAMYKRLAAAYRALFADNSRPSLILAHGGREMSDAFRQSIWQPVGGTAEDYARDDGNSVSECHAWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPDQDLLLFHSRFAFTDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDDRQPPVLHILAPHWQEQAEEGWLGQELKGTGYVYADHACLWRTQALLRQYGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVSFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRYHRPSGQIVLVSDTGEASYYSKRFGLVG
>LS483477.1|SQI68194.1|1035144_1036191_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFTVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGMSVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>LS483477.1|SQI68195.1|1036442_1037351_+|Sulfate-adenylyltransferase-subunit-2-1
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LS483477.1|SQI68196.1|1037360_1038800_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNIAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVREPVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LS483477.1|SQI68197.1|1038786_1039392_+|adenosine-5-phosphosulfate-kinase
MAQHDENVVWHAHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVQERVGHERFIEIYVDTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>LS483477.1|SQI68198.1|1039442_1039766_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LS483477.1|SQI68199.1|1039956_1040268_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTNR
>LS483477.1|SQI68200.1|1040286_1040997_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKAVIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>LS483477.1|SQI68201.1|1040996_1041476_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYILGNVDVTIIAQAPKMLPHIPQMRIFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>LS483477.1|SQI68202.1|1041472_1042522_+|tRNA-pseudouridine-13-synthase
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFAPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVEIRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQREALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>LS483477.1|SQI68203.1|1042502_1043264_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLEQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: LS483477_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483477_4

2220997-2222550

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGAGAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRT

25 spacers

The CRISPR arrays of LS483477_4

>merge|LS483477|4|2220997-2222550|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCGCCTATACGTTATCGAATCAACCGTCGCGGAACGTGTTCCCCGCGAGAGCGGGGATAAACCGGAACTGGATAACAGTCGCCAGTTCAGGAGTTTGTGTTCCCCGCGAGAGCGGGGATAAACCGCGCAGATGCCCGGCGGCGGCCGTACTCCTGTAGTGTTCCCCGCGAGAGCGGGGATAAACCGCGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAAGTGTTCCCCGCGAGAGCGGGGATAAACCGCGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAAGTGTTCCCCGCGAGAGCGGGGATAAACCGGTATCAGCGACCCTGACGATCCGAAGTGGGTTGTGTTCCCCGCGAGAGCGGGGATAAACCGGCCATACTTGTATCCTTGATTTTTCAAAGAACGTGTTCCCCGCGAGAGCGGGGATAAACCGACGTTTTCCAGGTTCCGTTATCGTTCCAGATGGTGTTCCCCGCGAGAGCGGGGATAAACCGAGTTCCAACACAACAGGCGGTCATAACCATTCGTGTTCCCCGCGAGAGCGGGGATAAACCGCGGGGAGACTAAAGGGCAGCTTTTGGCCTGGCGTGTTCCCCGCGAGAGCGGGGATAAACCGAAGCTATGGAAACAGGCTACTGGCCTGCACCAGTGTTCCCCGCGAGAGCGGGGATAAACCGGTTAAGGGGGAGTGATATGGCTACTTTGACGAGTGTTCCCCGCGAGAGCGGGGATAAACCGTGAAATCTGCATGAAAATGGAATACCAGGAAGGTGTTCCCCGCGAGAGCGGGGATAAACCGCCACGCAGTGAAATCGGTGCTCATCTGTTTAAGTGTTCCCCGCGAGAGCGGGGATAAACCGGCGTCCGGGGTAGTGATAAAACTCAGGGTGTGGTGTTCCCCGCGAGAGCGGGGATAAACCGGTCTTCGGTGACACTTTTTAAGCAACGTAAGGGTGTTCCCCGCGAGAGCGGGGATAAACCGTGGATTCCCGGACTGGCGATTTTTCTGTATTTGTGTTCCCCGCGAGAGCGGGGATAAACCGGTTATCTGCGGCCTGTTTCAACTTCTGCCTGAGTGTTCCCCGCGAGAGCGGGGATAAACCGTATTCATATCAGTAACCTCGTTTCAGTTTTGCGTGTTCCCCGCGAGAGCGGGGATAAACCGATTAAACCCGGTGGCTTTATGTGCGTAATTGTGTGTTCCCCGCGAGAGCGGGGATAAACCGCCCAGTTCAATGCTGGGTTTTCTTTTATGTAAGTGTTCCCCGCGAGAGCGGGGATAAACCGCAAAGACGGCCTCACATGGTTCGACGCTGTACGTGTTCCCCGCGAGAGCGGGGATAAACCGACGGGGTATAATATTAAAATTATTAAGTTGGTGTGTTCCCCGCGAGAGCGGGGATAAACCAGTTCCTCCGGCGTTGATTTGAGTATGGAATCCGTGTTCCCCGCGAGAGCGGGGATAAACCGGCGGCAGGATGAATAAGCATATCGAGAGAATGGTGTTCCCCGCGAGAGCGCTGAGTTTGTG

>LS483477|4|2|2220997-2222489|PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCTATACGTTATCGAATCAACCGTCGCGGAAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GAACTGGATAACAGTCGCCAGTTCAGGAGTTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGCAGATGCCCGGCGGCGGCCGTACTCCTGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTATCAGCGACCCTGACGATCCGAAGTGGGTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCATACTTGTATCCTTGATTTTTCAAAGAAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACGTTTTCCAGGTTCCGTTATCGTTCCAGATG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGTTCCAACACAACAGGCGGTCATAACCATTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGGGGAGACTAAAGGGCAGCTTTTGGCCTGGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAGCTATGGAAACAGGCTACTGGCCTGCACCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTAAGGGGGAGTGATATGGCTACTTTGACGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGAAATCTGCATGAAAATGGAATACCAGGAAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCACGCAGTGAAATCGGTGCTCATCTGTTTAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGTCCGGGGTAGTGATAAAACTCAGGGTGTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCTTCGGTGACACTTTTTAAGCAACGTAAGG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGGATTCCCGGACTGGCGATTTTTCTGTATTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTATCTGCGGCCTGTTTCAACTTCTGCCTGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TATTCATATCAGTAACCTCGTTTCAGTTTTGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATTAAACCCGGTGGCTTTATGTGCGTAATTGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCCAGTTCAATGCTGGGTTTTCTTTTATGTAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CAAAGACGGCCTCACATGGTTCGACGCTGTAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACGGGGTATAATATTAAAATTATTAAGTTGGT
GTGTTCCCCGCGAGAGCGGGGATAAACCA	GTTCCTCCGGCGTTGATTTGAGTATGGAATCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG

>LS483477|4|4|2220997-2222550|CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCTATACGTTATCGAATCAACCGTCGCGGAAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GAACTGGATAACAGTCGCCAGTTCAGGAGTTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGCAGATGCCCGGCGGCGGCCGTACTCCTGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTATCAGCGACCCTGACGATCCGAAGTGGGTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCATACTTGTATCCTTGATTTTTCAAAGAAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACGTTTTCCAGGTTCCGTTATCGTTCCAGATG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGTTCCAACACAACAGGCGGTCATAACCATTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGGGGAGACTAAAGGGCAGCTTTTGGCCTGGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAGCTATGGAAACAGGCTACTGGCCTGCACCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTAAGGGGGAGTGATATGGCTACTTTGACGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGAAATCTGCATGAAAATGGAATACCAGGAAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCACGCAGTGAAATCGGTGCTCATCTGTTTAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGTCCGGGGTAGTGATAAAACTCAGGGTGTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCTTCGGTGACACTTTTTAAGCAACGTAAGG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGGATTCCCGGACTGGCGATTTTTCTGTATTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTATCTGCGGCCTGTTTCAACTTCTGCCTGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TATTCATATCAGTAACCTCGTTTCAGTTTTGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATTAAACCCGGTGGCTTTATGTGCGTAATTGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCCAGTTCAATGCTGGGTTTTCTTTTATGTAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CAAAGACGGCCTCACATGGTTCGACGCTGTAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACGGGGTATAATATTAAAATTATTAAGTTGGT
GTGTTCCCCGCGAGAGCGGGGATAAACCA	GTTCCTCCGGCGTTGATTTGAGTATGGAATCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGGCAGGATGAATAAGCATATCGAGAGAATG
GTGTTCCCCGCGAGAGCGCTGAGTTTGTG

>LS483477|4|3|2220997-2222550|CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCTATACGTTATCGAATCAACCGTCGCGGAAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GAACTGGATAACAGTCGCCAGTTCAGGAGTTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGCAGATGCCCGGCGGCGGCCGTACTCCTGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGTTTTTCCTGTTCGTGCCGGCCCGGCGAAAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTATCAGCGACCCTGACGATCCGAAGTGGGTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCATACTTGTATCCTTGATTTTTCAAAGAAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACGTTTTCCAGGTTCCGTTATCGTTCCAGATG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGTTCCAACACAACAGGCGGTCATAACCATTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGGGGAGACTAAAGGGCAGCTTTTGGCCTGGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAGCTATGGAAACAGGCTACTGGCCTGCACCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTAAGGGGGAGTGATATGGCTACTTTGACGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGAAATCTGCATGAAAATGGAATACCAGGAAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCACGCAGTGAAATCGGTGCTCATCTGTTTAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGTCCGGGGTAGTGATAAAACTCAGGGTGTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCTTCGGTGACACTTTTTAAGCAACGTAAGG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TGGATTCCCGGACTGGCGATTTTTCTGTATTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTATCTGCGGCCTGTTTCAACTTCTGCCTGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TATTCATATCAGTAACCTCGTTTCAGTTTTGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATTAAACCCGGTGGCTTTATGTGCGTAATTGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCCAGTTCAATGCTGGGTTTTCTTTTATGTAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CAAAGACGGCCTCACATGGTTCGACGCTGTAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACGGGGTATAATATTAAAATTATTAAGTTGGT
GTGTTCCCCGCGAGAGCGGGGATAAACCA	GTTCCTCCGGCGTTGATTTGAGTATGGAATCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGGCAGGATGAATAAGCATATCGAGAGAATG
GTGTTCCCCGCGAGAGCGCTGAGTTTGTG

Protein	Signature genes	Signature genes Name	Protein_function
LS483477.1\|SQI70056.1\|2210010_2211807_-\|Nitrate/nitrite-sensor-protein	unknown	unknown	gnl\|CDD\|182581
LS483477.1\|SQI70059.1\|2213928_2217672_+\|respiratory-nitrate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|162434
LS483477.1\|SQI70067.1\|2226964_2227873_+\|glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|184021
LS483477.1\|SQI70000.1\|2206696_2207386_+\|cation-transport-protein	unknown	unknown	gnl\|CDD\|226226
LS483477.1\|SQI70061.1\|2219200_2219911_+\|respiratory-nitrate-reductase-1-subunit-delta	unknown	unknown	gnl\|CDD\|185014
LS483477.1\|SQI70065.1\|2224761_2225658_+\|phospholipase,-patatin-family	unknown	unknown	gnl\|CDD\|182352
LS483477.1\|SQI70062.1\|2219910_2220588_+\|respiratory-nitrate-reductase-1-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
LS483477.1\|SQI70054.1\|2209367_2210018_-\|nitrate/nitrite-response-regulator-protein-NarL	unknown	unknown	gnl\|CDD\|182619
LS483477.1\|SQI70070.1\|2229892_2232571_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
LS483477.1\|SQI70033.1\|2207412_2207766_-\|Putative-ACR-protein	unknown	unknown	gnl\|CDD\|224470
LS483477.1\|SQI70057.1\|2212145_2213543_+\|major-facilitator-superfamily-nitrite-extrusion-protein	unknown	unknown	gnl\|CDD\|184994
LS483477.1\|SQI70060.1\|2217668_2219204_+\|respiratory-nitrate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|224063
LS483477.1\|SQI70035.1\|2208101_2209367_+\|invasin	unknown	unknown	gnl\|CDD\|236661
LS483477.1\|SQI70068.1\|2228004_2228418_-\|DNA-binding-protein-h-ns	unknown	unknown	gnl\|CDD\|182858
LS483477.1\|SQI70069.1\|2229080_2229698_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
LS483477.1\|SQI70066.1\|2225748_2226762_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|182652
LS483477.1\|SQI70072.1\|2234459_2236091_+\|oligopeptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|185059
LS483477.1\|SQI70063.1\|2223290_2224133_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
LS483477.1\|SQI70071.1\|2233047_2233695_+\|membrane-protein	unknown	unknown	gnl\|CDD\|236850
LS483477.1\|SQI70064.1\|2224183_2224642_-\|Protein-YchJ	unknown	unknown	gnl\|CDD\|234966

Protein	Function_ID	Function_description	E-value
LS483477.1\|SQI70056.1\|2210010_2211807_-\|Nitrate/nitrite-sensor-protein	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
LS483477.1\|SQI70059.1\|2213928_2217672_+\|respiratory-nitrate-reductase-1-subunit-alpha	gnl\|CDD\|162434	TIGR01580, Respiratory_nitrate_reductase_1_alpha_chain, respiratory nitrate reductase, alpha subunit. The Nitrate reductase enzyme complex allows bacteria to use nitrate as an electron acceptor during anaerobic growth. The enzyme complex consists of a tetramer that has an alpha, beta and 2 gamma subunits. The alpha and beta subunits have catalytic activity and the gamma subunits attach the enzyme to the membrane and is a b-type cytochrome that receives electrons from the quinone pool and transfers them to the beta subunit. This model is specific for the alpha subunit for nitrate reductase I (narG) and nitrate reductase II (narZ) for gram positive and gram negative bacteria.A few thermophiles and archaea also match the model The seed members used to make the model include Nitrate reductases from Pseudomonas fluorescens (GP:11344601), E.coli (SP:P09152) and B.subtilis (SP:P42175). All seed members are experimentally characterized. Some unpublished nitrate reductases, that are shorter sequences, and probably fragments fall in between the noise and trusted cutoffs. Pfam models pfam00384 (Molybdopterin oxidoreductase) and pfam01568(Molydopterin dinucleotide binding domain) will also match the nitrate reductase, alpha subunit. [Energy metabolism, Anaerobic].	0
LS483477.1\|SQI70067.1\|2226964_2227873_+\|glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
LS483477.1\|SQI70000.1\|2206696_2207386_+\|cation-transport-protein	gnl\|CDD\|226226	COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism].	6.75286e-77
LS483477.1\|SQI70061.1\|2219200_2219911_+\|respiratory-nitrate-reductase-1-subunit-delta	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	5.87378e-88
LS483477.1\|SQI70065.1\|2224761_2225658_+\|phospholipase,-patatin-family	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
LS483477.1\|SQI70062.1\|2219910_2220588_+\|respiratory-nitrate-reductase-1-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	1.55033e-132
LS483477.1\|SQI70054.1\|2209367_2210018_-\|nitrate/nitrite-response-regulator-protein-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.27802e-141
LS483477.1\|SQI70070.1\|2229892_2232571_-\|alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
LS483477.1\|SQI70033.1\|2207412_2207766_-\|Putative-ACR-protein	gnl\|CDD\|224470	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism].	3.7796e-50
LS483477.1\|SQI70057.1\|2212145_2213543_+\|major-facilitator-superfamily-nitrite-extrusion-protein	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
LS483477.1\|SQI70060.1\|2217668_2219204_+\|respiratory-nitrate-reductase-1-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
LS483477.1\|SQI70035.1\|2208101_2209367_+\|invasin	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
LS483477.1\|SQI70068.1\|2228004_2228418_-\|DNA-binding-protein-h-ns	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	4.918e-77
LS483477.1\|SQI70069.1\|2229080_2229698_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.50577e-115
LS483477.1\|SQI70066.1\|2225748_2226762_+\|regulatory-protein	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
LS483477.1\|SQI70072.1\|2234459_2236091_+\|oligopeptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|185059	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional.	0
LS483477.1\|SQI70063.1\|2223290_2224133_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	9.83293e-177
LS483477.1\|SQI70071.1\|2233047_2233695_+\|membrane-protein	gnl\|CDD\|236850	PRK11111, PRK11111, YchE family NAAT transporter.	6.2097e-137
LS483477.1\|SQI70064.1\|2224183_2224642_-\|Protein-YchJ	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	1.35103e-106

>LS483477.1|SQI70062.1|2219910_2220588_+|respiratory-nitrate-reductase-1-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPVDVKQKMAMIAGGACGVLTLVGGILLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASKHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQIVRARH
>LS483477.1|SQI70061.1|2219200_2219911_+|respiratory-nitrate-reductase-1-subunit-delta
MIELVIVSRLLEYPDAALWQHQQELFDALASSEHLDKEDVRTLVVFLRDLTAQEILDAQASYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHGLQLDSRELPDHLPLYLEYLAQLPKNEALGGLQDIAPILALLSARLQQRESRYAVLFDLLLKLANTTIDKGKVAEKIADEVRDDTPQALDAVWEEEQVKFFADRGCNESEIAAHQRRFAGAVAPQYLNITTGGQH
>LS483477.1|SQI70060.1|2217668_2219204_+|respiratory-nitrate-reductase-1-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRALLLGKIFANPHLPGIDDYYEPFDYDYQNLHTAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFENMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPAVVEQALKDGVPQSVIDAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVDSLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGKVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHRELARDAFPEKSGCGFTFGDGCHGSDTKFNLFNSRRIDAVDVTSKTEPHA
>LS483477.1|SQI70059.1|2213928_2217672_+|respiratory-nitrate-reductase-1-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDSLGQENNPEWKTVAISSNGEMVAPNGSIGFRWGEKGKWNLEQRDGTTGAETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDNVLLHKLPAKRLQLADGSSALVTTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWAEQITGVPRAQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPPRHMNSTSYFYNHSSQWRYETVSAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGTNPLYIAREAEKAGMTPVDYTVKSLKDGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTEHGIQGLDLGKQGGVKPEEVEWVDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWDIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMTVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYIKADGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGRKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSETDAKDLGIEDNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>LS483477.1|SQI70057.1|2212145_2213543_+|major-facilitator-superfamily-nitrite-extrusion-protein
MSHSSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGRRWTAFSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSQGVEQPDGSQLYLANAAWIWVPFLAIFTLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTLPTGGVGGSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSEERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKNKK
>LS483477.1|SQI70056.1|2210010_2211807_-|Nitrate/nitrite-sensor-protein
MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNAHVVAEDVSRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQPWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEFTCQSDISCDDKGCHLCPRSALPMINGGTTLKWRLTDSHTQYGILLATLPYGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDNGCGVPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTFIPEINFTETQGDTHE
>LS483477.1|SQI70054.1|2209367_2210018_-|nitrate/nitrite-response-regulator-protein-NarL
MNNQEPATILLIDDHPMLRTGVKQLVSMAPDISVVGEASNGEQGIDLAESLDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATTDRDVTQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>LS483477.1|SQI70035.1|2208101_2209367_+|invasin
MMPESHEGEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDVNVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNVGVGQRWAQDGWLLGYNTFYDNLLDENLQRAGVGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMSDDNPHWQQFQEQ
>LS483477.1|SQI70033.1|2207412_2207766_-|Putative-ACR-protein
MQNIVIIANGAAYGSESLFNSLRLAIALREQESHLDLRLFLMSDAVTAGLRGQKPAEGYNIQQMLEILTAQNVPVKLCKTCADGRGITPLPLIDGVEIGTLVELAQWTLAADKVLTF
>LS483477.1|SQI70000.1|2206696_2207386_+|cation-transport-protein
MLTRDFLVNADCKTAFGAIEESLLWSAEQRAVSLAATLACRPNDGAVWIFGYGSLMWNPALVYEESCTGTLEGWHRAFCLRLTAGRGTACQPGRMLALKEGGRTTGVAYRLPESTLEEELTLLWKREMITGCYLPTWCSLTLDNGRMVNALVFIMDPRHPLYESDTHALTIAPLIAAASGPLGTNAQYLFLLDQELRKLGMHDTCLDDLVASVKALLGVKEEQAIANLS
>LS483477.1|SQI70063.1|2223290_2224133_-|formyltetrahydrofolate-deformylase
MQSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHETLRSLVERFEIPFELVSHEGLTREEHDRKMADAIDAHQPDYVVLAKYMRVLTPGFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>LS483477.1|SQI70064.1|2224183_2224642_-|Protein-YchJ
MSQPCPCGSADEYSLCCGRIVSGERVAPDPSHLMRSRYCAFVMKDADYLIKSWHPTCNAAAFRDDIIAGFANTRWLGLTIFEHTWSEAENTGYVSFIARFSEQGKTGAIIERSRFIKENGQWYYIDGTRPQLGRNDPCPCGSGKKFKKCCGQ
>LS483477.1|SQI70065.1|2224761_2225658_+|phospholipase,-patatin-family
MKIGLALGSGAARGWSHIGVIKALKQTGIDIDIVAGCSIGSLVGAAYACNKLSALEQWVCSFRYWDVLRLMDVSWGRGGLLRGERVFNHYRDIMPVTDFDHCSRRFGAVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVEHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLLSVNVGNINEESDDSLPWHKRLKERFSSLTSRRGVSSPGAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRAHAAIAAGQLAVEKKMDELIPLVRTDV
>LS483477.1|SQI70066.1|2225748_2226762_+|regulatory-protein
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPELGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVPLGTLGNAYLNQLSQRCDSWQCQIWGAGGRLRLMLSAE
>LS483477.1|SQI70067.1|2226964_2227873_+|glucose-1-phosphate-uridylyltransferase
MAALNSKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGNEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGNSQIMVEPVEDVTAYGVVNCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWALLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNSLGAEFKAWLEEEMGIKK
>LS483477.1|SQI70068.1|2228004_2228418_-|DNA-binding-protein-h-ns
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEEQGKQLEDFLIKE
>LS483477.1|SQI70069.1|2229080_2229698_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNTSLFEEIRAESARQTIHCVLVDESQFLTRQQVYQLSEVVDKLDIPVLCYGLRTDFRGELFVGSQYLLSWSDKLVELKTICFCGRKASMVLRLDQDGRPYNEGEQVVIGGNERYVSVCRKHYKDALEEGSLTAIQERHRHI
>LS483477.1|SQI70070.1|2229892_2232571_-|alcohol-dehydrogenase
MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIIEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRARFASHGGYMLQGQELKAVQNVILKNGALNAAIVGQPAYKIAELAGFSVPETTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEEAVEKAEKLVAMGGIGHTSCLYTDQDNQQDRVNYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSVVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGRDFTEGEVAAKKDVVAAPKAEKKAKKSA
>LS483477.1|SQI70071.1|2233047_2233695_+|membrane-protein
MIQTLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTATARNKTNLTANLSVAIILWSSLFLGDGILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAIRESIGVVPLALPLMAGPGAISSTIVWGTRYHSIAHLLGFSVAIALFALCCWGVFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
>LS483477.1|SQI70072.1|2234459_2236091_+|oligopeptide-ABC-transporter-substrate-binding-protein
MSNITKKSLIAAGILTALIAANAATAADVPASVQLADKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWENKDFKVWTFHLRKNAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGKKPATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFGDKWTQPANIVTNGAYKLKNWVVNERIVLERNPQYWDNDKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADKPLTFDLLYNTSDLHKKLAIAVASIWKKNLGVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIKH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LS483477_2	2.20\|1015425\|32\|LS483477\|CRISPRCasFinder,CRT	1015425-1015456	32	LS483477.1	840356-840387	0	1.0

1. spacer 2.20|1015425|32|LS483477|CRISPRCasFinder,CRT matches to position: 840356-840387, mismatch: 0, identity: 1.0

tgtatgtcgttaatatggggatcgctgaggtc	CRISPR spacer
tgtatgtcgttaatatggggatcgctgaggtc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NC_010393	Phage Gifsy-2, complete genome	12326-12357	0	1.0
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	KT630649	Salmonella phage SEN34, complete genome	36804-36835	0	1.0
LS483477_2	2.11\|1014873\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014873-1014904	32	KT630646	Salmonella phage SEN5, complete genome	19515-19546	0	1.0
LS483477_2	2.11\|1014873\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014873-1014904	32	KT630645	Salmonella phage SEN4, complete genome	19515-19546	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	33392-33423	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	33392-33423	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	33329-33360	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK972693	Salmonella phage SI23, complete genome	12749-12780	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK770415	Salmonella phage SF11, complete genome	8849-8880	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KR296686	Salmonella phage 22, complete genome	14262-14293	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK972694	Salmonella phage SE22, complete genome	33837-33868	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK770414	Salmonella phage SE16, complete genome	12745-12776	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MT774487	Salmonella phage MG40, complete genome	32164-32195	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_002371	Enterobacteria phage P22 virus, complete genome	33392-33423	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KR296688	Salmonella phage 34, complete genome	24449-24480	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AF217253	Bacteriophage P22 complete genome	15143-15174	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	31423-31454	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	X78401	Bacteriophage P22 right operon, orf 48, replication genes 18 and 12, nin region genes, ninG phosphatase, late control gene 23, orf 60, complete cds, late control region, start of lysis gene 13	1065-1096	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK972686	Salmonella phage SF3, complete genome	32199-32230	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK972685	Salmonella phage SE10, complete genome	33418-33449	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KR296687	Salmonella phage 25, complete genome	24458-24489	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	33329-33360	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	23692-23723	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	M10074	Bacteriophage P22 right operon gene c1, replication genes 18 and 12, complete cds, and cro gene encoding a binding protein, 3' end	1513-1544	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	GQ422451	Enterobacteria phage Phi75, partial genome	14597-14628	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	GQ422450	Enterobacteria phage UAB_Phi20, complete genome	1070-1101	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AF527608	Bacteriophage P22-pbi, complete sequence	33392-33423	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	CP051279	Salmonella phage ST-35, complete genome	28310-28341	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MK972692	Salmonella phage SE21, complete genome	32973-33004	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_047875	Salmonella phage UPF_BP1, complete genome	4288-4319	0	1.0
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MT932212	Salmonella phage VSe13, complete genome	31571-31602	0	1.0
LS483477_3	3.1\|1032813\|32\|LS483477\|CRISPRCasFinder,CRT	1032813-1032844	32	KT630646	Salmonella phage SEN5, complete genome	11725-11756	0	1.0
LS483477_3	3.1\|1032813\|32\|LS483477\|CRISPRCasFinder,CRT	1032813-1032844	32	KT630645	Salmonella phage SEN4, complete genome	11725-11756	0	1.0
LS483477_3	3.2\|1032874\|32\|LS483477\|CRISPRCasFinder,CRT	1032874-1032905	32	KT630646	Salmonella phage SEN5, complete genome	18892-18923	0	1.0
LS483477_3	3.2\|1032874\|32\|LS483477\|CRISPRCasFinder,CRT	1032874-1032905	32	KT630645	Salmonella phage SEN4, complete genome	18892-18923	0	1.0
LS483477_3	3.6\|1033118\|32\|LS483477\|CRISPRCasFinder,CRT	1033118-1033149	32	CP051275	Salmonella phage SW-37, complete genome	28037-28068	0	1.0
LS483477_3	3.6\|1033118\|32\|LS483477\|CRISPRCasFinder,CRT	1033118-1033149	32	KC139516	Salmonella phage FSL SP-016, partial genome	41457-41488	0	1.0
LS483477_3	3.11\|1033423\|32\|LS483477\|CRISPRCasFinder,CRT	1033423-1033454	32	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	130916-130947	0	1.0
LS483477_3	3.36\|1034948\|32\|LS483477\|CRISPRCasFinder,CRT	1034948-1034979	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	49041-49072	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_KX580713	Escherichia coli strain ZJ623 plasmid unnamed, complete sequence	4267-4298	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_KY352406	Salmonella enterica subsp. enterica serovar Typhimurium strain YL14P053 plasmid pMCR16_P053, complete sequence	30028-30059	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_KY463452	Escherichia coli strain WCHEC050622 plasmid pMCR_WCHEC1622, complete sequence	23478-23509	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NC_022650	Escherichia coli JJ1886 plasmid pJJ1886_4, complete sequence	15955-15986	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_KX377410	Klebsiella pneumoniae strain WCHKP1511 plasmid pMCR_1511, complete sequence	34465-34496	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_KP324830	Escherichia coli isolate FP671 plasmid pHNFP671, complete sequence	41560-41591	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP042602	Escherichia coli strain NCYU-29-69 plasmid pNCYU-29-69-3_MCR3, complete sequence	2188-2219	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP035638	Enterobacter cloacae strain EN3600 plasmid unnamed6, complete sequence	50701-50732	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	LC549805	Escherichia coli VNCEc117 plasmid pVNCEc117 DNA, complete sequence	46352-46383	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP033354	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-2, complete sequence	4371-4402	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP032987	Escherichia coli strain BE2-5 plasmid pMCR_BE2-5, complete sequence	42885-42916	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP024128	Escherichia coli strain 14EC001 plasmid p14EC001a, complete sequence	44343-44374	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP025711	Escherichia coli strain YDC107 plasmid pYDC107_41, complete sequence	3539-3570	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP044383	Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-3_MCR3, complete sequence	46468-46499	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_AP023201	Escherichia coli strain TUM18780 plasmid pMTY18780-4, complete sequence	19283-19314	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP051225	Escherichia coli strain SCZE5 plasmid pSCZE3	2744-2775	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP035195	Klebsiella pneumoniae strain LH102-A plasmid pLH102-A, complete sequence	22069-22100	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NC_023907	Escherichia coli strain HS102707 plasmid pHS102707, complete sequence	5730-5761	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP045957	Salmonella enterica subsp. enterica serovar Enteritidis strain AUSMDU00010527 plasmid pAUSMDU00010527, complete sequence	3539-3570	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_AP021897	Escherichia coli strain 2018-02-2CC plasmid p2018_02_02CC, complete sequence	18335-18366	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MH043623	Escherichia coli strain GDZJ002 plasmid pGDZJ002-1, complete sequence	27917-27948	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MH043626	Escherichia coli strain GDZJ004 plasmid pGDZJ004, complete sequence	27724-27755	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MF978389	Escherichia coli strain GDT6F36 plasmid pHNGDF36-1, complete sequence	10064-10095	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MF990207	Escherichia coli strain GDP6F1 plasmid pHNGDF1-1, complete sequence	5148-5179	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MG552133	Escherichia coli strain ECSC102 plasmid pECSC102, complete sequence	25759-25790	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MF678351	Escherichia coli strain WCHEC025943 plasmid pMCR3_WCHEC1943, complete sequence	33063-33094	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MF489760	Escherichia coli strain WCHEC-LL123 plasmid pMCR3_WCHEC-LL123, complete sequence	27726-27757	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MF136778	Escherichia coli strain HKSHmcr1_P2_EC plasmid pHKSHmcr1_P2_p1, complete sequence	17763-17794	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_MH043625	Escherichia coli strain GDZJ003 plasmid pGDZJ003-1-MCR-3, complete sequence	27735-27766	0	1.0
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP027203	Escherichia coli strain WCHEC025943 plasmid pMCR3_025943, complete sequence	15468-15499	0	1.0
LS483477_4	4.2\|2221087\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221087-2221118	32	JQ288021	Salmonella phage SPN3UB, complete genome	32641-32672	0	1.0
LS483477_4	4.2\|2221087\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221087-2221118	32	KC139516	Salmonella phage FSL SP-016, partial genome	3414-3445	0	1.0
LS483477_4	4.2\|2221087\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221087-2221118	32	NC_010393	Phage Gifsy-2, complete genome	5242-5273	0	1.0
LS483477_4	4.2\|2221087\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221087-2221118	32	NC_010392	Phage Gifsy-1, complete genome	43128-43159	0	1.0
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	NC_010393	Phage Gifsy-2, complete genome	12933-12964	0	1.0
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	NC_010392	Phage Gifsy-1, complete genome	35386-35417	0	1.0
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	KT630649	Salmonella phage SEN34, complete genome	37411-37442	0	1.0
LS483477_4	4.10\|2221575\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221575-2221606	32	CP051275	Salmonella phage SW-37, complete genome	28745-28776	0	1.0
LS483477_4	4.10\|2221575\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221575-2221606	32	NC_010392	Phage Gifsy-1, complete genome	34933-34964	0	1.0
LS483477_4	4.12\|2221697\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221697-2221728	32	KU927493	Salmonella phage 118970_sal3, complete genome	22249-22280	0	1.0
LS483477_4	4.12\|2221697\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221697-2221728	32	KU927493	Salmonella phage 118970_sal3, complete genome	61840-61871	0	1.0
LS483477_4	4.15\|2221880\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221880-2221911	32	JQ288021	Salmonella phage SPN3UB, complete genome	32248-32279	0	1.0
LS483477_4	4.15\|2221880\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221880-2221911	32	KC139516	Salmonella phage FSL SP-016, partial genome	3807-3838	0	1.0
LS483477_4	4.15\|2221880\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221880-2221911	32	NC_010393	Phage Gifsy-2, complete genome	4849-4880	0	1.0
LS483477_4	4.15\|2221880\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221880-2221911	32	NC_010392	Phage Gifsy-1, complete genome	43521-43552	0	1.0
LS483477_4	4.24\|2222429\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222429-2222460	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	44495-44526	0	1.0
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	JQ288021	Salmonella phage SPN3UB, complete genome	42223-42254	1	0.969
LS483477_2	2.5\|1014507\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014507-1014538	32	MK972713	Salmonella phage SW5, complete genome	19414-19445	1	0.969
LS483477_2	2.5\|1014507\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014507-1014538	32	MK972714	Salmonella phage SW3, complete genome	19636-19667	1	0.969
LS483477_2	2.5\|1014507\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014507-1014538	32	NC_049460	Salmonella phage SI7, complete genome	9856-9887	1	0.969
LS483477_2	2.11\|1014873\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014873-1014904	32	NZ_CP022659	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence	52173-52204	1	0.969
LS483477_2	2.13\|1014997\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014997-1015028	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	59702-59733	1	0.969
LS483477_2	2.13\|1014997\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014997-1015028	32	KT630646	Salmonella phage SEN5, complete genome	13532-13563	1	0.969
LS483477_2	2.13\|1014997\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014997-1015028	32	KT630645	Salmonella phage SEN4, complete genome	13532-13563	1	0.969
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_028696	Salmonella phage SEN22, complete genome	36742-36773	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KY709687	Salmonella phage 29485, complete genome	7848-7879	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KU927496	Salmonella phage 101962B_sal5, complete genome	13959-13990	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KU927491	Salmonella phage 146851_sal5, complete genome	14726-14757	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KU927495	Salmonella phage 103203_sal4, complete genome	14222-14253	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MH370387	Salmonella phage S149, complete genome	15987-16018	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KU927498	Salmonella phage 64795_sal4, complete genome	33245-33276	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	KU927492	Salmonella phage 146851_sal4, complete genome	33255-33286	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MG407615	Salmonella phage Bp96115, partial genome	5906-5937	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_030919	Salmonella phage 118970_sal4, complete genome	14250-14281	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_017985	Salmonella phage SPN9CC, complete genome	13956-13987	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	31627-31658	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_005841	Enterobacteria phage ST104 DNA, complete genome	15988-16019	1	0.969
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	34135-34166	1	0.969
LS483477_3	3.2\|1032874\|32\|LS483477\|CRISPRCasFinder,CRT	1032874-1032905	32	NZ_CP022659	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence	52796-52827	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	KU927496	Salmonella phage 101962B_sal5, complete genome	5255-5286	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	KU927491	Salmonella phage 146851_sal5, complete genome	5255-5286	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	KU927495	Salmonella phage 103203_sal4, complete genome	5518-5549	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	KU927498	Salmonella phage 64795_sal4, complete genome	24541-24572	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	KU927492	Salmonella phage 146851_sal4, complete genome	24552-24583	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	NC_030919	Salmonella phage 118970_sal4, complete genome	5544-5575	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	NC_017985	Salmonella phage SPN9CC, complete genome	5252-5283	1	0.969
LS483477_3	3.15\|1033667\|32\|LS483477\|CRISPRCasFinder,CRT	1033667-1033698	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	24662-24693	1	0.969
LS483477_3	3.32\|1034704\|32\|LS483477\|CRISPRCasFinder,CRT	1034704-1034735	32	NZ_CP024975	Escherichia coli strain CV839-15 plasmid pCV839-15-p1, complete sequence	65569-65600	1	0.969
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_KP008371	Klebsiella pneumoniae strain 565 plasmid PKPCAPSS, complete sequence	66289-66320	1	0.969
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	MN542377	Klebsiella pneumoniae subsp. pneumoniae strain 494 plasmid pKPC2_sg1, complete sequence	67745-67776	1	0.969
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	MN542378	Klebsiella pneumoniae subsp. pneumoniae strain 607 plasmid pKPC2_sg2, complete sequence	67745-67776	1	0.969
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	NZ_CP030221	Salmonella enterica strain SA20021456 plasmid pSA20021456.2, complete sequence	14885-14916	1	0.969
LS483477_4	4.6\|2221331\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221331-2221362	32	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	127394-127425	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	25667-25698	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	25667-25698	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	25604-25635	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	KC911857	Salmonella phage SPC32N, complete genome	37980-38011	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	KR296686	Salmonella phage 22, complete genome	21982-22013	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	L06296	Bacteriophage P22 eaA - eaI genes, complete cds	4356-4387	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	NC_002371	Enterobacteria phage P22 virus, complete genome	25667-25698	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	KR296688	Salmonella phage 34, complete genome	32171-32202	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	KC911856	Salmonella phage SPC32H, complete genome	37980-38011	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	AF217253	Bacteriophage P22 complete genome	7418-7449	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	NC_016761	Salmonella phage SPN1S, complete genome	38004-38035	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	MH370364	Salmonella phage S107, complete genome	32134-32165	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	KR296687	Salmonella phage 25, complete genome	32178-32209	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	25604-25635	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	MH370382	Salmonella phage S135, complete genome	32134-32165	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	JQ691610	Salmonella phage SPN9TCW, complete genome	38009-38040	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	MH370383	Salmonella phage S137, complete genome	32134-32165	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	AF527608	Bacteriophage P22-pbi, complete sequence	25667-25698	1	0.969
LS483477_4	4.16\|2221941\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221941-2221972	32	EU570103	Salmonella phage epsilon34, complete genome	25366-25397	1	0.969
LS483477_4	4.20\|2222185\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222185-2222216	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	42118-42149	1	0.969
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	KC139516	Salmonella phage FSL SP-016, partial genome	41839-41870	2	0.938
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NC_010392	Phage Gifsy-1, complete genome	35993-36024	2	0.938
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	CP025713	Escherichia phage YDC107_2 chromosome, complete genome	2730-2761	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	37119-37150	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_006949	Enterobacteria phage ES18, complete genome	43091-43122	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	37119-37150	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	20138-20169	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	37056-37087	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK972693	Salmonella phage SI23, complete genome	7201-7232	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	AY736146	Salmonella typhimurium bacteriophage ES18, complete sequence	43091-43122	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MG969415	UNVERIFIED: Salmonella phage GE_vB_TR, complete genome	5178-5209	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK770415	Salmonella phage SF11, complete genome	14397-14428	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	KR296686	Salmonella phage 22, complete genome	10538-10569	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK972694	Salmonella phage SE22, complete genome	28289-28320	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	AY121864	Enterobacteria phage P22 section F, partial genomic sequence	2270-2301	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK770414	Salmonella phage SE16, complete genome	18293-18324	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MT774487	Salmonella phage MG40, complete genome	35894-35925	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_002371	Enterobacteria phage P22 virus, complete genome	37119-37150	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	KR296688	Salmonella phage 34, complete genome	20724-20755	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MH370387	Salmonella phage S149, complete genome	19989-20020	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MG407615	Salmonella phage Bp96115, partial genome	9908-9939	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	AF217253	Bacteriophage P22 complete genome	18870-18901	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_013059	Salmonella phage c341, complete genome	36510-36541	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	35979-36010	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	X78401	Bacteriophage P22 right operon, orf 48, replication genes 18 and 12, nin region genes, ninG phosphatase, late control gene 23, orf 60, complete cds, late control region, start of lysis gene 13	4792-4823	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	45030-45061	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MH370364	Salmonella phage S107, complete genome	46179-46210	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK972686	Salmonella phage SF3, complete genome	37747-37778	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	36240-36271	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK972685	Salmonella phage SE10, complete genome	38966-38997	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	KR296687	Salmonella phage 25, complete genome	20734-20765	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	37056-37087	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	29240-29271	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MH370382	Salmonella phage S135, complete genome	46952-46983	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	FJ000341	Salmonella phage g341c, complete genome	36510-36541	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	GQ422451	Enterobacteria phage Phi75, partial genome	18324-18355	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MH370383	Salmonella phage S137, complete genome	46954-46985	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	GQ422450	Enterobacteria phage UAB_Phi20, complete genome	4797-4828	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	AF527608	Bacteriophage P22-pbi, complete sequence	37119-37150	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	NC_005841	Enterobacteria phage ST104 DNA, complete genome	19990-20021	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	EU570103	Salmonella phage epsilon34, complete genome	38551-38582	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MK972692	Salmonella phage SE21, complete genome	27425-27456	2	0.938
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MT932212	Salmonella phage VSe13, complete genome	35298-35329	2	0.938
LS483477_3	3.1\|1032813\|32\|LS483477\|CRISPRCasFinder,CRT	1032813-1032844	32	NZ_CP022659	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence	59252-59283	2	0.938
LS483477_3	3.6\|1033118\|32\|LS483477\|CRISPRCasFinder,CRT	1033118-1033149	32	JQ288021	Salmonella phage SPN3UB, complete genome	42605-42636	2	0.938
LS483477_3	3.36\|1034948\|32\|LS483477\|CRISPRCasFinder,CRT	1034948-1034979	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	22886-22917	2	0.938
LS483477_3	3.36\|1034948\|32\|LS483477\|CRISPRCasFinder,CRT	1034948-1034979	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	26205-26236	2	0.938
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	LC532225	Enterobacter hormaechei subsp. xiangfangensis A2483 plasmid pA2483imp-1 DNA, complete sequence	19652-19683	2	0.938
LS483477_4	4.1\|2221026\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221026-2221057	32	LC532227	Enterobacter hormaechei subsp. xiangfangensis A2504 plasmid pA2504imp-1 DNA, complete sequence	40738-40769	2	0.938
LS483477_4	4.9\|2221514\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221514-2221545	32	KT630644	Salmonella phage SEN1, complete genome	12922-12953	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK972693	Salmonella phage SI23, complete genome	6468-6499	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK770415	Salmonella phage SF11, complete genome	15130-15161	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK972694	Salmonella phage SE22, complete genome	27556-27587	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK770414	Salmonella phage SE16, complete genome	19026-19057	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK972686	Salmonella phage SF3, complete genome	38480-38511	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK972685	Salmonella phage SE10, complete genome	39699-39730	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	29973-30004	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MN855665	Bacteriophage sp. isolate 358, complete genome	6538-6569	2	0.938
LS483477_4	4.21\|2222246\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222246-2222277	32	MK972692	Salmonella phage SE21, complete genome	26692-26723	2	0.938
LS483477_4	4.22\|2222307\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222307-2222338	32	KT630646	Salmonella phage SEN5, complete genome	27923-27954	2	0.938
LS483477_4	4.22\|2222307\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222307-2222338	32	KT630645	Salmonella phage SEN4, complete genome	27923-27954	2	0.938
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	KM389435	UNVERIFIED: Escherichia phage Phi05_1999 B clone contig00002 genomic sequence	11330-11361	3	0.906
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	KM389252	UNVERIFIED: Escherichia phage Phi05_2388 B clone contig00001 genomic sequence	14070-14101	3	0.906
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	MN187550	Escherichia phage phiv142-3, complete genome	4603-4634	3	0.906
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	NC_031077	Enterobacter phage Tyrion, complete genome	21916-21947	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	LC487997	Stx2-converting phage Stx2a F578 genes for Shiga toxin 2 production region, complete sequence	13405-13436	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AP012539	Stx2-converting phage Stx2a_WGPS6 proviral DNA, complete genome	15327-15358	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	CP000711	Enterobacteria phage CUS-3, complete genome	30604-30635	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MT813197	Escherichia phage vB_EcoP_Kapi1, complete genome	10427-10458	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MG986485	Escherichia phage SH2026Stx1, complete genome	14375-14406	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_019714	Enterobacteria phage HK446, complete genome	30025-30056	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	FM180578	Enterobacteria phage 2851, complete genome	12887-12918	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	FJ188381	Stx2-converting phage 1717, complete genome	13556-13587	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	LC487996	Stx2-converting phage Stx2a 981509 genes for Shiga toxin 2 production region, complete sequence	16321-16352	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AF069529	Bacteriophage HK97, complete genome	30778-30809	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_002167	Enterobacteria phage HK97, complete genome	30778-30809	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_011356	Enterobacteria phage YYZ-2008, complete prophage genome	13079-13110	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MT833387	Escherichia phage HF4s, complete genome	31238-31269	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	JQ086374	Enterobacteria phage HK544, complete genome	31191-31222	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_049944	Stx2-converting phage Stx2a_WGPS8 proviral DNA, complete genome	12896-12927	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	FJ184280	Enterobacteria phage YYZ-2008, complete genome	13079-13110	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AJ413274	Bacteriophage Nil2 proviral n gene, ORF22, ci gene, cro gene, cii gene, ORF53, o gene, p gene, ninA gene, ORF29, ORF30, ORF31, ninB gene, ORF175, ninE gene, ORF23, ORF57, antA gene, antB gene, roi gene, ninG gene, ninI gene, q gene, stx2A gene, stx2B gene, ileZ gene, argN gene and argO gene	4540-4571	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	MT740315	Escherichia phage JEP4, complete genome	30669-30700	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	AP012538	Stx2-converting phage Stx2a_WGPS4 proviral DNA, complete genome	12879-12910	3	0.906
LS483477_2	2.17\|1015241\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015241-1015272	32	NC_011357	Stx2-converting phage 1717, complete prophage genome	13556-13587	3	0.906
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	KM389360	UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00001 genomic sequence	12491-12522	4	0.875
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	NZ_CP014649	Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence	28489-28520	4	0.875
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	NZ_CP007729	Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence	177456-177487	4	0.875
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	NZ_CP037929	Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence	232437-232468	4	0.875
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	MN922301	Klebsiella pneumoniae strain KP-14159 plasmid pKPN-IT-14159, complete sequence	232437-232468	4	0.875
LS483477_2	2.14\|1015058\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015058-1015089	32	MK416010	Klebsiella phage ST11-OXA245phi3.2, complete genome	7722-7753	4	0.875
LS483477_4	4.6\|2221331\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221331-2221362	32	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	66637-66668	4	0.875
LS483477_4	4.12\|2221697\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221697-2221728	32	NC_028696	Salmonella phage SEN22, complete genome	23967-23998	4	0.875
LS483477_4	4.13\|2221758\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221758-2221789	32	NZ_CP022662	Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence	131448-131479	4	0.875
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_LN890286	Buchnera aphidicola (Tuberolachnus salignus) strain BTs isolate Pazieg plasmid pLeu, complete sequence	5245-5276	5	0.844
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_013549	Buchnera aphidicola plasmid pleu-BTg, complete sequence	5101-5132	5	0.844
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039222	Piscirickettsia salmonis strain NVI 5692 plasmid unnamed3, complete sequence	69049-69080	5	0.844
LS483477_3	3.26\|1034338\|32\|LS483477\|CRISPRCasFinder,CRT	1034338-1034369	32	NZ_CP033075	Buttiauxella sp. 3AFRM03 plasmid pBTX_57, complete sequence	41182-41213	5	0.844
LS483477_2	2.13\|1014997\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014997-1015028	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	94978-95009	6	0.812
LS483477_2	2.13\|1014997\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014997-1015028	32	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	5102-5133	6	0.812
LS483477_3	3.4\|1032996\|32\|LS483477\|CRISPRCasFinder,CRT	1032996-1033027	32	NZ_CP018048	Pseudomonas aeruginosa strain DN1 plasmid unnamed1, complete sequence	270377-270408	6	0.812
LS483477_3	3.4\|1032996\|32\|LS483477\|CRISPRCasFinder,CRT	1032996-1033027	32	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	204189-204220	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MN694647	Marine virus AFVG_250M689, complete genome	16691-16722	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MK977714	Corynebacterium phage Bran, complete genome	43769-43800	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NC_048780	Corynebacterium phage StAB, complete genome	45036-45067	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MK977706	Corynebacterium phage Dina, complete genome	43666-43697	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MH926061	Corynebacterium phage Troy, complete genome	43894-43925	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NC_048789	Corynebacterium phage Stiles, complete genome	42131-42162	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NC_048069	Corynebacterium phage SamW, complete genome	43894-43925	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NC_048790	Corynebacterium phage Lederberg, complete genome	44929-44960	6	0.812
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	HQ201308	Cronobacter phage ENT47670, complete genome	23460-23491	6	0.812
LS483477_3	3.20\|1033972\|32\|LS483477\|CRISPRCasFinder,CRT	1033972-1034003	32	MN694575	Marine virus AFVG_250M956, complete genome	11577-11608	6	0.812
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_013519	Sebaldella termitidis ATCC 33386 plasmid pSTERM02, complete sequence	6639-6670	6	0.812
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP053952	Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence	231570-231601	6	0.812
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	559648-559679	6	0.812
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP009921	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence	113437-113468	6	0.812
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP035095	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence	62237-62268	6	0.812
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP053949	Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence	361720-361751	6	0.812
LS483477_3	3.28\|1034460\|32\|LS483477\|CRISPRCasFinder,CRT	1034460-1034491	32	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	13363-13394	6	0.812
LS483477_3	3.28\|1034460\|32\|LS483477\|CRISPRCasFinder,CRT	1034460-1034491	32	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	453046-453077	6	0.812
LS483477_3	3.34\|1034826\|32\|LS483477\|CRISPRCasFinder,CRT	1034826-1034857	32	NC_018687	Bacillus thuringiensis MC28 plasmid pMC189, complete sequence	138433-138464	6	0.812
LS483477_3	3.36\|1034948\|32\|LS483477\|CRISPRCasFinder,CRT	1034948-1034979	32	MK719750	Rheinheimera phage vB_RspM_Barba31A, complete genome	31751-31782	6	0.812
LS483477_3	3.36\|1034948\|32\|LS483477\|CRISPRCasFinder,CRT	1034948-1034979	32	NC_048190	Rheinheimera phage vB_RspM_Barba19A, complete genome	31739-31770	6	0.812
LS483477_4	4.9\|2221514\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221514-2221545	32	NZ_CP022659	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence	57595-57626	6	0.812
LS483477_3	3.5\|1033057\|32\|LS483477\|CRISPRCasFinder,CRT	1033057-1033088	32	HG796310	Uncultured bacterium plasmid pRGI00361	131-162	7	0.781
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NC_048791	Corynebacterium phage Adelaide, complete genome	43389-43420	7	0.781
LS483477_3	3.8\|1033240\|32\|LS483477\|CRISPRCasFinder,CRT	1033240-1033271	32	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	93948-93979	7	0.781
LS483477_3	3.8\|1033240\|32\|LS483477\|CRISPRCasFinder,CRT	1033240-1033271	32	NC_009427	Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence	36729-36760	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	139664-139695	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_AP017382	Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence	59471-59502	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	6158-6189	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_KT020842	Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence	22879-22910	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_010281	Bacillus thuringiensis plasmid pFR12, complete sequence	6064-6095	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	910-941	7	0.781
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	MN694659	Marine virus AFVG_250M322, complete genome	14820-14851	7	0.781
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1393541-1393572	7	0.781
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	MN478377	Bacteriophage Eos, complete genome	14906-14937	7	0.781
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NC_031059	Rhodovulum phage vB_RhkS_P1, complete genome	25891-25922	8	0.75
LS483477_2	2.6\|1014568\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014568-1014599	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	369566-369597	8	0.75
LS483477_2	2.7\|1014629\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014629-1014660	32	NC_012439	Persephonella marina EX-H1 plasmid, complete sequence	7562-7593	8	0.75
LS483477_2	2.8\|1014690\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014690-1014721	32	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	275869-275900	8	0.75
LS483477_2	2.9\|1014751\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014751-1014782	32	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	130011-130042	8	0.75
LS483477_2	2.13\|1014997\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014997-1015028	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	150252-150283	8	0.75
LS483477_3	3.2\|1032874\|32\|LS483477\|CRISPRCasFinder,CRT	1032874-1032905	32	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	635984-636015	8	0.75
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NZ_CP017943	Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence	403643-403674	8	0.75
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NZ_CP045917	Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence	190223-190254	8	0.75
LS483477_3	3.8\|1033240\|32\|LS483477\|CRISPRCasFinder,CRT	1033240-1033271	32	NC_003324	Sinorhizobium phage PBC5, complete genome	54507-54538	8	0.75
LS483477_3	3.8\|1033240\|32\|LS483477\|CRISPRCasFinder,CRT	1033240-1033271	32	AF448724	Sinorhizobium meliloti phage PBC5, complete genome	54507-54538	8	0.75
LS483477_3	3.13\|1033545\|32\|LS483477\|CRISPRCasFinder,CRT	1033545-1033576	32	NZ_CP016850	Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence	62499-62530	8	0.75
LS483477_3	3.18\|1033850\|32\|LS483477\|CRISPRCasFinder,CRT	1033850-1033881	32	NZ_CP024444	Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence	226565-226596	8	0.75
LS483477_3	3.18\|1033850\|32\|LS483477\|CRISPRCasFinder,CRT	1033850-1033881	32	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	100319-100350	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	846521-846552	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013635	Rhizobium sp. N324 plasmid pRspN324e, complete sequence	627885-627916	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	759249-759280	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	778433-778464	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	213947-213978	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	767172-767203	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	753724-753755	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	755899-755930	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	740080-740111	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	136156-136187	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	776508-776539	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	770227-770258	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	778433-778464	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	740080-740111	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	755899-755930	8	0.75
LS483477_3	3.21\|1034033\|32\|LS483477\|CRISPRCasFinder,CRT	1034033-1034064	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	752174-752205	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	306588-306619	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	17066-17097	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	56885-56916	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039210	Piscirickettsia salmonis strain Psal-103 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP048067	Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p1, complete sequence	163255-163286	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039033	Piscirickettsia salmonis strain Psal-070 plasmid unnamed1, complete sequence	18306-18337	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038894	Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038924	Piscirickettsia salmonis strain Psal-011 plasmid unnamed1, complete sequence	19611-19642	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038953	Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence	68074-68105	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038958	Piscirickettsia salmonis strain Psal-041 plasmid unnamed1, complete sequence	22284-22315	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039196	Piscirickettsia salmonis strain Psal-161 plasmid unnamed1, complete sequence	70138-70169	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038812	Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP024182	Moraxella osloensis strain KSH plasmid p2, complete sequence	59720-59751	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013769	Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence	119248-119279	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_012219	Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28	88419-88450	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP024449	Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence	1275-1306	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP033942	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-5, complete sequence	89719-89750	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013763	Piscirickettsia salmonis strain PM21567A plasmid p1PS2, complete sequence	53618-53649	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013761	Piscirickettsia salmonis strain AY6492A plasmid p4PS1, complete sequence	124604-124635	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013774	Piscirickettsia salmonis strain PM37984A plasmid p1PS4, complete sequence	57580-57611	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013779	Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence	91492-91523	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP024187	Moraxella osloensis strain TT16 plasmid p2, complete sequence	57523-57554	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP050945	Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence	37084-37115	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP029459	Clostridium novyi strain 150557 plasmid pCN1, complete sequence	116504-116535	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038892	Piscirickettsia salmonis strain Psal-005 plasmid unnamed1, complete sequence	19611-19642	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038914	Piscirickettsia salmonis strain Psal-010a plasmid unnamed1, complete sequence	18306-18337	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038968	Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039202	Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence	15801-15832	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039205	Piscirickettsia salmonis strain Psal-182 plasmid unnamed1, complete sequence	12821-12852	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039042	Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039182	Piscirickettsia salmonis strain Psal-158 plasmid unnamed1, complete sequence	15801-15832	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039187	Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence	15801-15832	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038948	Piscirickettsia salmonis strain Psal-028 plasmid unnamed1, complete sequence	62183-62214	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038933	Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038973	Piscirickettsia salmonis strain Psal-069 plasmid unnamed1, complete sequence	19611-19642	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP024178	Moraxella osloensis strain YHS plasmid pYHS2, complete sequence	96695-96726	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039036	Piscirickettsia salmonis strain Psal-071 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039066	Piscirickettsia salmonis strain Psal-107 plasmid unnamed1, complete sequence	15801-15832	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038887	Piscirickettsia salmonis strain Psal-004 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039215	Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038938	Piscirickettsia salmonis strain Psal-026 plasmid unnamed1, complete sequence	19766-19797	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038963	Piscirickettsia salmonis strain Psal-051 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038877	Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038882	Piscirickettsia salmonis strain Psal-003 plasmid unnamed1, complete sequence	403-434	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	AP018715	Enterococcus phage phiM1EF22 DNA, complete sequence	101512-101543	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	MK721192	Enterococcus phage vB_EfaM_Ef2.3, complete genome	139070-139101	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	AP018714	Enterococcus phage phiEF17H DNA, complete sequence	104340-104371	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	HM029250	Lactococcus phage 949, complete genome	15948-15979	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_009904	Enterococcus phage phiEF24C, complete genome	97533-97564	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	AP009390	Enterococcus phage phiEF24C DNA, complete genome	97533-97564	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	GQ452243	Enterococcus phage phiEf11, complete genome	24128-24159	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	MN854830	Enterococcus phage PBEF129, complete genome	137004-137035	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	KJ801817	Enterococcus phage ECP3, complete genome	139738-139769	8	0.75
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	AB609718	Enterococcus phage phiEF24C-P2 DNA, complete genome	97533-97564	8	0.75
LS483477_3	3.27\|1034399\|32\|LS483477\|CRISPRCasFinder,CRT	1034399-1034430	32	JN192400	Staphylococcus phage vB_SepiS-phiIPLA5, complete genome	31927-31958	8	0.75
LS483477_3	3.31\|1034643\|32\|LS483477\|CRISPRCasFinder,CRT	1034643-1034674	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	368903-368934	8	0.75
LS483477_3	3.34\|1034826\|32\|LS483477\|CRISPRCasFinder,CRT	1034826-1034857	32	AP014249	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C17, * SEQUENCING IN PROGRESS *	7767-7798	8	0.75
LS483477_4	4.2\|2221087\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221087-2221118	32	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	777671-777702	8	0.75
LS483477_4	4.4\|2221209\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221209-2221240	32	AP018320	Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome	161295-161326	8	0.75
LS483477_4	4.5\|2221270\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221270-2221301	32	AP018320	Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome	161295-161326	8	0.75
LS483477_4	4.7\|2221392\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221392-2221423	32	KX190833	Bacillus phage vB_BtS_BMBtp14, complete genome	10680-10711	8	0.75
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NZ_AP022622	Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1	18985-19016	9	0.719
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NZ_AP022622	Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1	116213-116244	9	0.719
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NC_021279	Mycobacteroides abscessus subsp. bolletii 50594 plasmid 2, complete sequence	18953-18984	9	0.719
LS483477_2	2.9\|1014751\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014751-1014782	32	KX349315	Cyanophage S-RIM12 isolate RW_14_0101, complete genome	122223-122254	9	0.719
LS483477_2	2.15\|1015119\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015119-1015150	32	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	33944-33975	9	0.719
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MH809532	Burkholderia phage phiE131, complete genome	11761-11792	9	0.719
LS483477_2	2.16\|1015180\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1015180-1015211	32	MH809533	Burkholderia phage phiE058, complete genome	11761-11792	9	0.719
LS483477_3	3.6\|1033118\|32\|LS483477\|CRISPRCasFinder,CRT	1033118-1033149	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	846922-846953	9	0.719
LS483477_3	3.6\|1033118\|32\|LS483477\|CRISPRCasFinder,CRT	1033118-1033149	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	666412-666443	9	0.719
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	179646-179677	9	0.719
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	AP013535	Uncultured Mediterranean phage uvMED DNA, complete genome, group G5, isolate: uvMED-CGR-U-MedDCM-OCT-S30-C10	32460-32491	9	0.719
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MN234170	Mycobacterium phage MalagasyRose, complete genome	28339-28370	9	0.719
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	KY224000	Mycobacterium phage Rich, complete genome	28260-28291	9	0.719
LS483477_3	3.8\|1033240\|32\|LS483477\|CRISPRCasFinder,CRT	1033240-1033271	32	NC_014642	Achromobacter xylosoxidans A8 plasmid pA82, complete sequence	149307-149338	9	0.719
LS483477_3	3.20\|1033972\|32\|LS483477\|CRISPRCasFinder,CRT	1033972-1034003	32	NC_028998	Phormidium phage MIS-PhV1B, complete genome	15261-15292	9	0.719
LS483477_3	3.20\|1033972\|32\|LS483477\|CRISPRCasFinder,CRT	1033972-1034003	32	KF437907	Phormidium phage MIS-PhV1A, complete genome	16325-16356	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_015712	Clostridium perfringens plasmid pCPPB-1, complete sequence	60353-60384	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_007772	Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence	64252-64283	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039090	Piscirickettsia salmonis strain Psal-111 plasmid unnamed3, complete sequence	44417-44448	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039115	Piscirickettsia salmonis strain Psal-135 plasmid unnamed3, complete sequence	28672-28703	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039063	Piscirickettsia salmonis strain Psal-099 plasmid unnamed3, complete sequence	28672-28703	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038906	Piscirickettsia salmonis strain Psal-008 plasmid unnamed2, complete sequence	41816-41847	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038926	Piscirickettsia salmonis strain Psal-011 plasmid unnamed3, complete sequence	5526-5557	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038929	Piscirickettsia salmonis strain Psal-013 plasmid unnamed2, complete sequence	21593-21624	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039174	Piscirickettsia salmonis strain Psal-138 plasmid unnamed3, complete sequence	44418-44449	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP012510	Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-2, complete sequence	11591-11622	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013788	Piscirickettsia salmonis strain PM58386B plasmid p2PS7, complete sequence	14955-14986	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013823	Piscirickettsia salmonis strain PM25344B plasmid p2PS14, complete sequence	11603-11634	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013803	Piscirickettsia salmonis strain PM22180B plasmid p2PS13, complete sequence	11591-11622	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP011852	Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-3, complete sequence	40195-40226	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039206	Piscirickettsia salmonis strain Psal-182 plasmid unnamed2, complete sequence	31934-31965	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039073	Piscirickettsia salmonis strain Psal-108 plasmid unnamed3, complete sequence	20451-20482	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039100	Piscirickettsia salmonis strain Psal-117 plasmid unnamed3, complete sequence	20451-20482	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039105	Piscirickettsia salmonis strain Psal-118 plasmid unnamed3, complete sequence	20451-20482	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039179	Piscirickettsia salmonis strain Psal-139 plasmid unnamed3, complete sequence	44417-44448	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039110	Piscirickettsia salmonis strain Psal-134 plasmid unnamed3, complete sequence	28647-28678	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039053	Piscirickettsia salmonis strain Psal-081 plasmid unnamed3, complete sequence	45222-45253	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013948	Piscirickettsia salmonis strain PSCGR01 plasmid pPsCRG01-3, complete sequence	46914-46945	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039058	Piscirickettsia salmonis strain Psal-098 plasmid unnamed3, complete sequence	20345-20376	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039079	Piscirickettsia salmonis strain Psal-109 plasmid unnamed3, complete sequence	20451-20482	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP039084	Piscirickettsia salmonis strain Psal-110 plasmid unnamed3, complete sequence	28672-28703	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038935	Piscirickettsia salmonis strain Psal-025 plasmid unnamed3, complete sequence	6795-6826	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038921	Piscirickettsia salmonis strain Psal-010b plasmid unnamed3, complete sequence	20451-20482	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP038902	Piscirickettsia salmonis strain Psal-006b plasmid unnamed4, complete sequence	28671-28702	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013808	Piscirickettsia salmonis strain PM31429B plasmid p2PS12, complete sequence	14955-14986	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP048061	Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p5, complete sequence	20359-20390	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP048061	Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p5, complete sequence	106059-106090	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP013783	Piscirickettsia salmonis strain PM49811B plasmid p2PS6, complete sequence	14955-14986	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP048054	Piscirickettsia salmonis strain Ps-11091B plasmid Ps11091B-p2, complete sequence	20457-20488	9	0.719
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NC_017140	Bacillus megaterium WSH-002 plasmid WSH-002_p2, complete sequence	8513-8544	9	0.719
LS483477_3	3.28\|1034460\|32\|LS483477\|CRISPRCasFinder,CRT	1034460-1034491	32	NZ_LT222315	Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T3	47999-48030	9	0.719
LS483477_3	3.28\|1034460\|32\|LS483477\|CRISPRCasFinder,CRT	1034460-1034491	32	NZ_LT963397	Pseudomonas cerasi isolate PL963 plasmid PP2, complete sequence	96578-96609	9	0.719
LS483477_3	3.34\|1034826\|32\|LS483477\|CRISPRCasFinder,CRT	1034826-1034857	32	MN693746	Marine virus AFVG_250M731, complete genome	6222-6253	9	0.719
LS483477_3	3.37\|1035009\|32\|LS483477\|CRISPRCasFinder,CRT	1035009-1035040	32	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	1271263-1271294	9	0.719
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	534738-534769	9	0.719
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	1437694-1437725	9	0.719
LS483477_4	4.4\|2221209\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221209-2221240	32	NZ_CP021918	Sagittula sp. P11 plasmid unnamed6, complete sequence	1229-1260	9	0.719
LS483477_4	4.5\|2221270\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221270-2221301	32	NZ_CP021918	Sagittula sp. P11 plasmid unnamed6, complete sequence	1229-1260	9	0.719
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	696246-696277	9	0.719
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	549541-549572	9	0.719
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	711453-711484	9	0.719
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NZ_CP027024	Streptomyces sp. WAC00288 plasmid p2, complete sequence	55660-55691	10	0.688
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NZ_CP013856	Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence	58352-58383	10	0.688
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1319267-1319298	10	0.688
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NC_004719	Streptomyces avermitilis MA-4680 = NBRC 14893 plasmid SAP1, complete sequence	65290-65321	10	0.688
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	179688-179719	10	0.688
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	MK977706	Corynebacterium phage Dina, complete genome	25683-25714	10	0.688
LS483477_2	2.6\|1014568\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014568-1014599	32	MH617638	Microviridae sp. isolate ctib106, complete genome	2376-2407	10	0.688
LS483477_2	2.9\|1014751\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014751-1014782	32	NZ_CP016310	Vibrio scophthalmi strain VS-12 plasmid pVS53, complete sequence	12505-12536	10	0.688
LS483477_2	2.9\|1014751\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014751-1014782	32	NZ_CP016310	Vibrio scophthalmi strain VS-12 plasmid pVS53, complete sequence	41034-41065	10	0.688
LS483477_3	3.3\|1032935\|32\|LS483477\|CRISPRCasFinder,CRT	1032935-1032966	32	LR745207	uncultured phage genome assembly, chromosome: 1	159730-159761	10	0.688
LS483477_3	3.5\|1033057\|32\|LS483477\|CRISPRCasFinder,CRT	1033057-1033088	32	NC_021560	Rhizobium phage RR1-A genomic sequence	18793-18824	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	2301473-2301504	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MK524490	Mycobacterium phage Donny, complete genome	28521-28552	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MH727561	Mycobacterium phage Serendipitous, complete genome	28320-28351	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	NC_022063	Mycobacterium phage Phelemich, complete genome	28769-28800	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	JN699007	Mycobacterium phage Acadian, complete genome	28516-28547	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	KF024727	Mycobacterium phage Reprobate, complete genome	28774-28805	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	MT889381	Mycobacterium phage Suigeneris, complete genome	28521-28552	10	0.688
LS483477_3	3.7\|1033179\|32\|LS483477\|CRISPRCasFinder,CRT	1033179-1033210	32	KR080199	Mycobacterium phage Baee, complete genome	28290-28321	10	0.688
LS483477_3	3.18\|1033850\|32\|LS483477\|CRISPRCasFinder,CRT	1033850-1033881	32	MG592570	Vibrio phage 1.199.B._10N.286.55.C10, partial genome	36430-36461	10	0.688
LS483477_3	3.18\|1033850\|32\|LS483477\|CRISPRCasFinder,CRT	1033850-1033881	32	MG592569	Vibrio phage 1.199.A._10N.286.55.C10, partial genome	36430-36461	10	0.688
LS483477_3	3.18\|1033850\|32\|LS483477\|CRISPRCasFinder,CRT	1033850-1033881	32	MG592477	Vibrio phage 1.105.O._10N.286.49.B4, partial genome	36885-36916	10	0.688
LS483477_3	3.22\|1034094\|32\|LS483477\|CRISPRCasFinder,CRT	1034094-1034125	32	NZ_CP053847	Campylobacter sp. CCUG 57310 plasmid pCORI-2, complete sequence	2915-2946	10	0.688
LS483477_3	3.30\|1034582\|32\|LS483477\|CRISPRCasFinder,CRT	1034582-1034613	32	NZ_CP039225	Piscirickettsia salmonis strain NVI 5692 plasmid unnamed6, complete sequence	3091-3122	10	0.688
LS483477_4	4.3\|2221148\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2221148-2221179	32	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	502471-502502	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP009065	Borreliella afzelii K78 plasmid lp28-4, complete sequence	20940-20971	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP009065	Borreliella afzelii K78 plasmid lp28-4, complete sequence	20960-20991	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP030883	Lactobacillus plantarum strain nF1 plasmid unnamed2, complete sequence	8-39	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP033891	Lactobacillus plantarum strain LMT1-48 plasmid p_3, complete sequence	10539-10570	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP018178	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-2, complete sequence	759-790	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NC_017234	Borreliella afzelii PKo plasmid lp28-4, complete sequence	2470-2501	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NC_017234	Borreliella afzelii PKo plasmid lp28-4, complete sequence	2490-2521	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP025283	Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence	6611-6642	10	0.688
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	MN855801	Bacteriophage sp. isolate 103, complete genome	4766-4797	10	0.688
LS483477_4	4.25\|2222490\|32\|LS483477\|CRISPRCasFinder,CRT	2222490-2222521	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	395342-395373	10	0.688
LS483477_2	2.3\|1014385\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	1014385-1014416	32	NZ_CP039912	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence	92563-92594	11	0.656
LS483477_2	2.20\|1015425\|32\|LS483477\|CRISPRCasFinder,CRT	1015425-1015456	32	KP007359	Enterobacteria phage vB_EcoM_VR5, complete genome	17826-17857	11	0.656
LS483477_3	3.5\|1033057\|32\|LS483477\|CRISPRCasFinder,CRT	1033057-1033088	32	MN694458	Marine virus AFVG_250M890, complete genome	24904-24935	11	0.656
LS483477_4	4.17\|2222002\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222002-2222033	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1205021-1205052	11	0.656
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	72416-72447	11	0.656
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	MK804893	Aeromonas phage 2-L372D, complete genome	4853-4884	11	0.656
LS483477_4	4.23\|2222368\|32\|LS483477\|PILER-CR,CRISPRCasFinder,CRT	2222368-2222399	32	NC_048770	Aeromonas phage 2_L372X, complete genome	1669-1700	11	0.656

1. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 0, identity: 1.0

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
ctcattagctgggcggcggcgttctccgcctc	Protospacer
********************************

2. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 0, identity: 1.0

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
ctcattagctgggcggcggcgttctccgcctc	Protospacer
********************************

3. spacer 2.11|1014873|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 0, identity: 1.0

cgcccccggttagttgttcactgcgctggaaa	CRISPR spacer
cgcccccggttagttgttcactgcgctggaaa	Protospacer
********************************

4. spacer 2.11|1014873|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 0, identity: 1.0

cgcccccggttagttgttcactgcgctggaaa	CRISPR spacer
cgcccccggttagttgttcactgcgctggaaa	Protospacer
********************************

5. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

6. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

7. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

8. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

9. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

10. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

11. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

12. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

13. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

14. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

15. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

16. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

17. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

18. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to X78401 (Bacteriophage P22 right operon, orf 48, replication genes 18 and 12, nin region genes, ninG phosphatase, late control gene 23, orf 60, complete cds, late control region, start of lysis gene 13) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

19. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

20. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

21. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

22. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

23. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

24. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to M10074 (Bacteriophage P22 right operon gene c1, replication genes 18 and 12, complete cds, and cro gene encoding a binding protein, 3' end) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

25. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to GQ422451 (Enterobacteria phage Phi75, partial genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

26. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

27. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

28. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP051279 (Salmonella phage ST-35, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

29. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

30. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

31. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT932212 (Salmonella phage VSe13, complete genome) position: , mismatch: 0, identity: 1.0

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgagaatgcttca	Protospacer
********************************

32. spacer 3.1|1032813|32|LS483477|CRISPRCasFinder,CRT matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 0, identity: 1.0

ccgtgtagccgtcatatgctgggaatgtcgct	CRISPR spacer
ccgtgtagccgtcatatgctgggaatgtcgct	Protospacer
********************************

33. spacer 3.1|1032813|32|LS483477|CRISPRCasFinder,CRT matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 0, identity: 1.0

ccgtgtagccgtcatatgctgggaatgtcgct	CRISPR spacer
ccgtgtagccgtcatatgctgggaatgtcgct	Protospacer
********************************

34. spacer 3.2|1032874|32|LS483477|CRISPRCasFinder,CRT matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 0, identity: 1.0

cacggaagtgattgccacttcggtgattttgg	CRISPR spacer
cacggaagtgattgccacttcggtgattttgg	Protospacer
********************************

35. spacer 3.2|1032874|32|LS483477|CRISPRCasFinder,CRT matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 0, identity: 1.0

cacggaagtgattgccacttcggtgattttgg	CRISPR spacer
cacggaagtgattgccacttcggtgattttgg	Protospacer
********************************

36. spacer 3.6|1033118|32|LS483477|CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 0, identity: 1.0

attaaagccgcagccaggcgtatcagggagaa	CRISPR spacer
attaaagccgcagccaggcgtatcagggagaa	Protospacer
********************************

37. spacer 3.6|1033118|32|LS483477|CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 0, identity: 1.0

attaaagccgcagccaggcgtatcagggagaa	CRISPR spacer
attaaagccgcagccaggcgtatcagggagaa	Protospacer
********************************

38. spacer 3.11|1033423|32|LS483477|CRISPRCasFinder,CRT matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cggcatggttattgtctgtggctacgacagca	CRISPR spacer
cggcatggttattgtctgtggctacgacagca	Protospacer
********************************

39. spacer 3.36|1034948|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gctggttttaacccactgctagtaaaacgata	CRISPR spacer
gctggttttaacccactgctagtaaaacgata	Protospacer
********************************

40. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX580713 (Escherichia coli strain ZJ623 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

41. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY352406 (Salmonella enterica subsp. enterica serovar Typhimurium strain YL14P053 plasmid pMCR16_P053, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

42. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY463452 (Escherichia coli strain WCHEC050622 plasmid pMCR_WCHEC1622, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

43. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_022650 (Escherichia coli JJ1886 plasmid pJJ1886_4, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

44. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX377410 (Klebsiella pneumoniae strain WCHKP1511 plasmid pMCR_1511, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

45. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP324830 (Escherichia coli isolate FP671 plasmid pHNFP671, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

46. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042602 (Escherichia coli strain NCYU-29-69 plasmid pNCYU-29-69-3_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

47. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035638 (Enterobacter cloacae strain EN3600 plasmid unnamed6, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

48. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to LC549805 (Escherichia coli VNCEc117 plasmid pVNCEc117 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

49. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033354 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-2, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

50. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032987 (Escherichia coli strain BE2-5 plasmid pMCR_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

51. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024128 (Escherichia coli strain 14EC001 plasmid p14EC001a, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

52. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025711 (Escherichia coli strain YDC107 plasmid pYDC107_41, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

53. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044383 (Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-3_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

54. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP023201 (Escherichia coli strain TUM18780 plasmid pMTY18780-4, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

55. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051225 (Escherichia coli strain SCZE5 plasmid pSCZE3) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

56. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035195 (Klebsiella pneumoniae strain LH102-A plasmid pLH102-A, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

57. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_023907 (Escherichia coli strain HS102707 plasmid pHS102707, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

58. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045957 (Salmonella enterica subsp. enterica serovar Enteritidis strain AUSMDU00010527 plasmid pAUSMDU00010527, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

59. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP021897 (Escherichia coli strain 2018-02-2CC plasmid p2018_02_02CC, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

60. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH043623 (Escherichia coli strain GDZJ002 plasmid pGDZJ002-1, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

61. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH043626 (Escherichia coli strain GDZJ004 plasmid pGDZJ004, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

62. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF978389 (Escherichia coli strain GDT6F36 plasmid pHNGDF36-1, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

63. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF990207 (Escherichia coli strain GDP6F1 plasmid pHNGDF1-1, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

64. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG552133 (Escherichia coli strain ECSC102 plasmid pECSC102, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

65. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF678351 (Escherichia coli strain WCHEC025943 plasmid pMCR3_WCHEC1943, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

66. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF489760 (Escherichia coli strain WCHEC-LL123 plasmid pMCR3_WCHEC-LL123, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

67. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF136778 (Escherichia coli strain HKSHmcr1_P2_EC plasmid pHKSHmcr1_P2_p1, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

68. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH043625 (Escherichia coli strain GDZJ003 plasmid pGDZJ003-1-MCR-3, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

69. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027203 (Escherichia coli strain WCHEC025943 plasmid pMCR3_025943, complete sequence) position: , mismatch: 0, identity: 1.0

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatcgaatcaaccgtcgcggaac	Protospacer
********************************

70. spacer 4.2|2221087|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 0, identity: 1.0

gaactggataacagtcgccagttcaggagttt	CRISPR spacer
gaactggataacagtcgccagttcaggagttt	Protospacer
********************************

71. spacer 4.2|2221087|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 0, identity: 1.0

gaactggataacagtcgccagttcaggagttt	CRISPR spacer
gaactggataacagtcgccagttcaggagttt	Protospacer
********************************

72. spacer 4.2|2221087|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 0, identity: 1.0

gaactggataacagtcgccagttcaggagttt	CRISPR spacer
gaactggataacagtcgccagttcaggagttt	Protospacer
********************************

73. spacer 4.2|2221087|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

gaactggataacagtcgccagttcaggagttt	CRISPR spacer
gaactggataacagtcgccagttcaggagttt	Protospacer
********************************

74. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 0, identity: 1.0

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
cgcagatgcccggcggcggccgtactcctgta	Protospacer
********************************

75. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
cgcagatgcccggcggcggccgtactcctgta	Protospacer
********************************

76. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 0, identity: 1.0

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
cgcagatgcccggcggcggccgtactcctgta	Protospacer
********************************

77. spacer 4.10|2221575|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 0, identity: 1.0

cggggagactaaagggcagcttttggcctggc	CRISPR spacer
cggggagactaaagggcagcttttggcctggc	Protospacer
********************************

78. spacer 4.10|2221575|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

cggggagactaaagggcagcttttggcctggc	CRISPR spacer
cggggagactaaagggcagcttttggcctggc	Protospacer
********************************

79. spacer 4.12|2221697|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 0, identity: 1.0

gttaagggggagtgatatggctactttgacga	CRISPR spacer
gttaagggggagtgatatggctactttgacga	Protospacer
********************************

80. spacer 4.12|2221697|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 0, identity: 1.0

gttaagggggagtgatatggctactttgacga	CRISPR spacer
gttaagggggagtgatatggctactttgacga	Protospacer
********************************

81. spacer 4.15|2221880|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 0, identity: 1.0

gcgtccggggtagtgataaaactcagggtgtg	CRISPR spacer
gcgtccggggtagtgataaaactcagggtgtg	Protospacer
********************************

82. spacer 4.15|2221880|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 0, identity: 1.0

gcgtccggggtagtgataaaactcagggtgtg	CRISPR spacer
gcgtccggggtagtgataaaactcagggtgtg	Protospacer
********************************

83. spacer 4.15|2221880|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 0, identity: 1.0

gcgtccggggtagtgataaaactcagggtgtg	CRISPR spacer
gcgtccggggtagtgataaaactcagggtgtg	Protospacer
********************************

84. spacer 4.15|2221880|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

gcgtccggggtagtgataaaactcagggtgtg	CRISPR spacer
gcgtccggggtagtgataaaactcagggtgtg	Protospacer
********************************

85. spacer 4.24|2222429|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gttcctccggcgttgatttgagtatggaatcc	CRISPR spacer
gttcctccggcgttgatttgagtatggaatcc	Protospacer
********************************

86. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 1, identity: 0.969

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
ctcattagctgggcggcggcgttctcggcctc	Protospacer
************************** *****

87. spacer 2.5|1014507|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972713 (Salmonella phage SW5, complete genome) position: , mismatch: 1, identity: 0.969

gcacacggaacgggttattcgtacagaaatca	CRISPR spacer
gcacacggaacgggttattcgcacagaaatca	Protospacer
*********************.**********

88. spacer 2.5|1014507|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972714 (Salmonella phage SW3, complete genome) position: , mismatch: 1, identity: 0.969

gcacacggaacgggttattcgtacagaaatca	CRISPR spacer
gcacacggaacgggttattcgcacagaaatca	Protospacer
*********************.**********

89. spacer 2.5|1014507|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_049460 (Salmonella phage SI7, complete genome) position: , mismatch: 1, identity: 0.969

gcacacggaacgggttattcgtacagaaatca	CRISPR spacer
gcacacggaacgggttattcgcacagaaatca	Protospacer
*********************.**********

90. spacer 2.11|1014873|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022659 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence) position: , mismatch: 1, identity: 0.969

cgcccccggttagttgttcactgcgctggaaa	CRISPR spacer
cgcccccggttagttattcactgcgctggaaa	Protospacer
***************.****************

91. spacer 2.13|1014997|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

aattaatttaatcacgccagcctcacaatata	CRISPR spacer
aattaatttaatcatgccagcctcacaatata	Protospacer
**************.*****************

92. spacer 2.13|1014997|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 1, identity: 0.969

aattaatttaatcacgccagcctcacaatata	CRISPR spacer
aattaatttaatcatgccagcctcacaatata	Protospacer
**************.*****************

93. spacer 2.13|1014997|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 1, identity: 0.969

aattaatttaatcacgccagcctcacaatata	CRISPR spacer
aattaatttaatcatgccagcctcacaatata	Protospacer
**************.*****************

94. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_028696 (Salmonella phage SEN22, complete genome) position: , mismatch: 1, identity: 0.969

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgatcatgca	Protospacer
***.****************************

95. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KY709687 (Salmonella phage 29485, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

96. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927496 (Salmonella phage 101962B_sal5, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

97. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927491 (Salmonella phage 146851_sal5, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

98. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

99. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370387 (Salmonella phage S149, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

100. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

101. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

102. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MG407615 (Salmonella phage Bp96115, partial genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

103. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

104. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_017985 (Salmonella phage SPN9CC, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

105. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

106. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_005841 (Enterobacteria phage ST104 DNA, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

107. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 1, identity: 0.969

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtaaagcggaattgagaatgcttca	Protospacer
**********.*********************

108. spacer 3.2|1032874|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP022659 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence) position: , mismatch: 1, identity: 0.969

cacggaagtgattgccacttcggtgattttgg	CRISPR spacer
cacggaagtgatcgccacttcggtgattttgg	Protospacer
************.*******************

109. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to KU927496 (Salmonella phage 101962B_sal5, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

110. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to KU927491 (Salmonella phage 146851_sal5, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

111. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

112. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

113. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

114. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

115. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to NC_017985 (Salmonella phage SPN9CC, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

116. spacer 3.15|1033667|32|LS483477|CRISPRCasFinder,CRT matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 1, identity: 0.969

aatgctcatcgatgtggtgccagtcacttaga	CRISPR spacer
aatgctcatcgatgtggcgccagtcacttaga	Protospacer
*****************.**************

117. spacer 3.32|1034704|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024975 (Escherichia coli strain CV839-15 plasmid pCV839-15-p1, complete sequence) position: , mismatch: 1, identity: 0.969

caggtgtgggatgaatatctctcgtcgcagac	CRISPR spacer
caggtgtgggatgaatatatctcgtcgcagac	Protospacer
****************** *************

118. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP008371 (Klebsiella pneumoniae strain 565 plasmid PKPCAPSS, complete sequence) position: , mismatch: 1, identity: 0.969

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatagaatcaaccgtcgcggaac	Protospacer
************ *******************

119. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN542377 (Klebsiella pneumoniae subsp. pneumoniae strain 494 plasmid pKPC2_sg1, complete sequence) position: , mismatch: 1, identity: 0.969

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatagaatcaaccgtcgcggaac	Protospacer
************ *******************

120. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN542378 (Klebsiella pneumoniae subsp. pneumoniae strain 607 plasmid pKPC2_sg2, complete sequence) position: , mismatch: 1, identity: 0.969

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatagaatcaaccgtcgcggaac	Protospacer
************ *******************

121. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030221 (Salmonella enterica strain SA20021456 plasmid pSA20021456.2, complete sequence) position: , mismatch: 1, identity: 0.969

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
cctatacgttatagaatcaaccgtcgcggaac	Protospacer
************ *******************

122. spacer 4.6|2221331|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gtatcagcgaccctgacgatccgaagtgggtt	CRISPR spacer
gtatcagcgacccggacgatccgaagtgggtt	Protospacer
************* ******************

123. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

124. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

125. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

126. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

127. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

128. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

129. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

130. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

131. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

132. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

133. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

134. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacactttttaagcaacgtaaag	Protospacer
******************************.*

135. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

136. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

137. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacactttttaagcaacgtaaag	Protospacer
******************************.*

138. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

139. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacactttttaagcaacgtaaag	Protospacer
******************************.*

140. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

141. spacer 4.16|2221941|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 1, identity: 0.969

gtcttcggtgacactttttaagcaacgtaagg	CRISPR spacer
gtcttcggtgacacgttttaagcaacgtaagg	Protospacer
************** *****************

142. spacer 4.20|2222185|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

attaaacccggtggctttatgtgcgtaattgt	CRISPR spacer
attaaacccggtggttttatgtgcgtaattgt	Protospacer
**************.*****************

143. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 2, identity: 0.938

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
ctcatgagctgggcggcggcgttctcggcctc	Protospacer
***** ******************** *****

144. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 2, identity: 0.938

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
ctcatgagctgggcggcggcgttctcggcctc	Protospacer
***** ******************** *****

145. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP025713 (Escherichia phage YDC107_2 chromosome, complete genome) position: , mismatch: 2, identity: 0.938

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
ttgaccacaacgaatacacaggtaacggcgtt	Protospacer
********************** ********

146. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

147. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_006949 (Enterobacteria phage ES18, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

148. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

149. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

150. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

151. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

152. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AY736146 (Salmonella typhimurium bacteriophage ES18, complete sequence) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

153. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MG969415 (UNVERIFIED: Salmonella phage GE_vB_TR, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

154. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

155. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

156. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

157. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AY121864 (Enterobacteria phage P22 section F, partial genomic sequence) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

158. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

159. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

160. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

161. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

162. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370387 (Salmonella phage S149, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

163. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MG407615 (Salmonella phage Bp96115, partial genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

164. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

165. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_013059 (Salmonella phage c341, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

166. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

167. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to X78401 (Bacteriophage P22 right operon, orf 48, replication genes 18 and 12, nin region genes, ninG phosphatase, late control gene 23, orf 60, complete cds, late control region, start of lysis gene 13) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

168. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

169. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

170. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

171. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

172. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

173. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

174. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

175. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

176. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

177. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to FJ000341 (Salmonella phage g341c, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

178. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to GQ422451 (Enterobacteria phage Phi75, partial genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

179. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

180. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

181. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

182. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_005841 (Enterobacteria phage ST104 DNA, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

183. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

184. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcgcgctctcgatcatgca	Protospacer
***.***********.****************

185. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT932212 (Salmonella phage VSe13, complete genome) position: , mismatch: 2, identity: 0.938

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ccggttcaccagttcacgctctcgctcatgca	Protospacer
***.******************** *******

186. spacer 3.1|1032813|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP022659 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence) position: , mismatch: 2, identity: 0.938

ccgtgtagccgtcatatgctgggaatgtcgct	CRISPR spacer
ccgtgcagccgtcatatgctgggaatgtctct	Protospacer
*****.*********************** **

187. spacer 3.6|1033118|32|LS483477|CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 2, identity: 0.938

attaaagccgcagccaggcgtatcagggagaa	CRISPR spacer
attaaagccgcagccaggcgtatcaaagagaa	Protospacer
*************************..*****

188. spacer 3.36|1034948|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gctggttttaacccactgctagtaaaacgata	CRISPR spacer
gctggttttaacccattgctagtaaaaagata	Protospacer
***************.*********** ****

189. spacer 3.36|1034948|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gctggttttaacccactgctagtaaaacgata	CRISPR spacer
gctggttttaacccattgctagtaaaaagata	Protospacer
***************.*********** ****

190. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to LC532225 (Enterobacter hormaechei subsp. xiangfangensis A2483 plasmid pA2483imp-1 DNA, complete sequence) position: , mismatch: 2, identity: 0.938

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
ccgatacgttatcgagtcaaccgtcgcggaac	Protospacer
** ************.****************

191. spacer 4.1|2221026|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to LC532227 (Enterobacter hormaechei subsp. xiangfangensis A2504 plasmid pA2504imp-1 DNA, complete sequence) position: , mismatch: 2, identity: 0.938

cctatacgttatcgaatcaaccgtcgcggaac	CRISPR spacer
ccgatacgttatcgagtcaaccgtcgcggaac	Protospacer
** ************.****************

192. spacer 4.9|2221514|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630644 (Salmonella phage SEN1, complete genome) position: , mismatch: 2, identity: 0.938

agttccaacacaacaggcggtcataaccattc	CRISPR spacer
agttccgatacaacaggcggtcataaccattc	Protospacer
******.*.***********************

193. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

194. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

195. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

196. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

197. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

198. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

199. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

200. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN855665 (Bacteriophage sp. isolate 358, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttttgtaa	Protospacer
*****.******************** *****

201. spacer 4.21|2222246|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 2, identity: 0.938

cccagttcaatgctgggttttcttttatgtaa	CRISPR spacer
cccagctcaatgctgggttttcttttgtgtaa	Protospacer
*****.********************.*****

202. spacer 4.22|2222307|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 2, identity: 0.938

caaagacggcctcacatggttcgacgctgtac	CRISPR spacer
caaagacggcctcgcatggctcgacgctgtac	Protospacer
*************.*****.************

203. spacer 4.22|2222307|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 2, identity: 0.938

caaagacggcctcacatggttcgacgctgtac	CRISPR spacer
caaagacggcctcgcatggctcgacgctgtac	Protospacer
*************.*****.************

204. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KM389435 (UNVERIFIED: Escherichia phage Phi05_1999 B clone contig00002 genomic sequence) position: , mismatch: 3, identity: 0.906

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
ttgaccacaacgaatacaccggtaacggcgtt	Protospacer
******************* ** ********

205. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KM389252 (UNVERIFIED: Escherichia phage Phi05_2388 B clone contig00001 genomic sequence) position: , mismatch: 3, identity: 0.906

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
ttgaccacaacgaatacaccggtaacggcgtt	Protospacer
******************* ** ********

206. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN187550 (Escherichia phage phiv142-3, complete genome) position: , mismatch: 3, identity: 0.906

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
ttgaccacaacgaatacaccggtaacggcgtt	Protospacer
******************* ** ********

207. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 3, identity: 0.906

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
ttgaccacaacgattacaccgggaacggcgtc	Protospacer
************* ***** ***********

208. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to LC487997 (Stx2-converting phage Stx2a F578 genes for Shiga toxin 2 production region, complete sequence) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

209. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AP012539 (Stx2-converting phage Stx2a_WGPS6 proviral DNA, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

210. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

211. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT813197 (Escherichia phage vB_EcoP_Kapi1, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

212. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MG986485 (Escherichia phage SH2026Stx1, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

213. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_019714 (Enterobacteria phage HK446, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

214. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to FM180578 (Enterobacteria phage 2851, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

215. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to FJ188381 (Stx2-converting phage 1717, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

216. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to LC487996 (Stx2-converting phage Stx2a 981509 genes for Shiga toxin 2 production region, complete sequence) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

217. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AF069529 (Bacteriophage HK97, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

218. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_002167 (Enterobacteria phage HK97, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

219. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_011356 (Enterobacteria phage YYZ-2008, complete prophage genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

220. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT833387 (Escherichia phage HF4s, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

221. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to JQ086374 (Enterobacteria phage HK544, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

222. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_049944 (Stx2-converting phage Stx2a_WGPS8 proviral DNA, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

223. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to FJ184280 (Enterobacteria phage YYZ-2008, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

224. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AJ413274 (Bacteriophage Nil2 proviral n gene, ORF22, ci gene, cro gene, cii gene, ORF53, o gene, p gene, ninA gene, ORF29, ORF30, ORF31, ninB gene, ORF175, ninE gene, ORF23, ORF57, antA gene, antB gene, roi gene, ninG gene, ninI gene, q gene, stx2A gene, stx2B gene, ileZ gene, argN gene and argO gene) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

225. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

226. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AP012538 (Stx2-converting phage Stx2a_WGPS4 proviral DNA, complete genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

227. spacer 2.17|1015241|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_011357 (Stx2-converting phage 1717, complete prophage genome) position: , mismatch: 3, identity: 0.906

ctttccggtagagcggaattgagaatgcttca	CRISPR spacer
ctttccggtagagcggaattgaaaacgcttcc	Protospacer
**********************.**.*****

228. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KM389360 (UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00001 genomic sequence) position: , mismatch: 4, identity: 0.875

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
ttgaccacaacgaatacacaggtaacggagct	Protospacer
********************** ***** *.

229. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014649 (Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence) position: , mismatch: 4, identity: 0.875

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
tcgaccataacgactacacagggaacggcgtt	Protospacer
*.*****.***** *****************

230. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007729 (Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence) position: , mismatch: 4, identity: 0.875

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
tcgaccataacgactacacagggaacggcgtt	Protospacer
*.*****.***** *****************

231. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037929 (Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence) position: , mismatch: 4, identity: 0.875

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
tcgaccataacgactacacagggaacggcgtt	Protospacer
*.*****.***** *****************

232. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN922301 (Klebsiella pneumoniae strain KP-14159 plasmid pKPN-IT-14159, complete sequence) position: , mismatch: 4, identity: 0.875

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
tcgaccataacgactacacagggaacggcgtt	Protospacer
*.*****.***** *****************

233. spacer 2.14|1015058|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK416010 (Klebsiella phage ST11-OXA245phi3.2, complete genome) position: , mismatch: 4, identity: 0.875

ttgaccacaacgaatacacagggaacggcgta	CRISPR spacer
tcgaccataacgactacacagggaacggcgtt	Protospacer
*.*****.***** *****************

234. spacer 4.6|2221331|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

gtatcagcgaccctgacgatccgaagtgggtt	CRISPR spacer
acatcagcgacccgaacgatccgaagtgggtt	Protospacer
..*********** .*****************

235. spacer 4.12|2221697|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_028696 (Salmonella phage SEN22, complete genome) position: , mismatch: 4, identity: 0.875

gttaagggggagtgatatggctactttgacga--	CRISPR spacer
gttaagggggagtgatatggctac--caacgaaa	Protospacer
************************  ..****

236. spacer 4.13|2221758|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022662 (Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence) position: , mismatch: 4, identity: 0.875

tgaaatctgcatgaaaatggaataccaggaag	CRISPR spacer
ctaaatctgtatgaaaatcgaataccaggaag	Protospacer
. *******.******** *************

237. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_LN890286 (Buchnera aphidicola (Tuberolachnus salignus) strain BTs isolate Pazieg plasmid pLeu, complete sequence) position: , mismatch: 5, identity: 0.844

ttatttaaaatataaacatttatattaattta	CRISPR spacer
taatttaaaatataaaaatttatattattatt	Protospacer
* ************** ********** * *

238. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_013549 (Buchnera aphidicola plasmid pleu-BTg, complete sequence) position: , mismatch: 5, identity: 0.844

ttatttaaaatataaacatttatattaattta	CRISPR spacer
taatttaaaatataaaaatttatattattatt	Protospacer
* ************** ********** * *

239. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039222 (Piscirickettsia salmonis strain NVI 5692 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.844

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatattaagatttata--aatttagc	Protospacer
 ************ ** *******  ******

240. spacer 3.26|1034338|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP033075 (Buttiauxella sp. 3AFRM03 plasmid pBTX_57, complete sequence) position: , mismatch: 5, identity: 0.844

agttgtttgtcgcgggattcagcctggctgaa	CRISPR spacer
aactttttgtcgccggtttcagcctggctgaa	Protospacer
*..* ******** ** ***************

241. spacer 2.13|1014997|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 6, identity: 0.812

aattaatttaatcacgccagcctcacaatata	CRISPR spacer
aatgagcgtaatcatgcaagcctcacaatata	Protospacer
*** *.. ******.** **************

242. spacer 2.13|1014997|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

aattaatttaatcacgccagcctcacaatata	CRISPR spacer
aatgagcgtaatcatgcaagcctcacaatata	Protospacer
*** *.. ******.** **************

243. spacer 3.4|1032996|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP018048 (Pseudomonas aeruginosa strain DN1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

--tagctggatcacccgtatcgttgatccagata	CRISPR spacer
cgtagct--atcacccttatcgatgatccagacc	Protospacer
  *****  ******* ***** *********.

244. spacer 3.4|1032996|32|LS483477|CRISPRCasFinder,CRT matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 6, identity: 0.812

--tagctggatcacccgtatcgttgatccagata	CRISPR spacer
cgtagct--atcacccttatcgatgatccagacc	Protospacer
  *****  ******* ***** *********.

245. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MN694647 (Marine virus AFVG_250M689, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
gtgccgcatcagcaacatcagccacggcaagt	Protospacer
   *********** ***************

246. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MK977714 (Corynebacterium phage Bran, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

247. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NC_048780 (Corynebacterium phage StAB, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

248. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MK977706 (Corynebacterium phage Dina, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

249. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MH926061 (Corynebacterium phage Troy, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

250. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NC_048789 (Corynebacterium phage Stiles, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

251. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NC_048069 (Corynebacterium phage SamW, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

252. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NC_048790 (Corynebacterium phage Lederberg, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgcacatcaccatcatcagccacggcacca	Protospacer
 *. *.***** ***************** **

253. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to HQ201308 (Cronobacter phage ENT47670, complete genome) position: , mismatch: 6, identity: 0.812

tacccgcatcagcatcatcagccacggcaaca-	CRISPR spacer
accccgcatcagaatcatcatccac-gcagcac	Protospacer
  ********** ******* **** ***.**

254. spacer 3.20|1033972|32|LS483477|CRISPRCasFinder,CRT matches to MN694575 (Marine virus AFVG_250M956, complete genome) position: , mismatch: 6, identity: 0.812

gtgatgattcaggaaaacaaactgcctgtagt--	CRISPR spacer
ctgatgattcaggaaatgaaactgc--gtaattc	Protospacer
 ***************  *******  ***.*

255. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_013519 (Sebaldella termitidis ATCC 33386 plasmid pSTERM02, complete sequence) position: , mismatch: 6, identity: 0.812

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaaatataaaaatttttataactaaa	Protospacer
**************** **** *** * *  *

256. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tttattaaaatttaaatatttatattaaagta	Protospacer
**  ******* ****.***********  **

257. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tttattaaaatttaaatatttatattaaagta	Protospacer
**  ******* ****.***********  **

258. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 6, identity: 0.812

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttctttaatatataaacatttataaaaaataa	Protospacer
** ***** ***************  ** * *

259. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttctttaatatataaacatttataaaaaataa	Protospacer
** ***** ***************  ** * *

260. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tttattaaaatttaaatatttatattaaagta	Protospacer
**  ******* ****.***********  **

261. spacer 3.28|1034460|32|LS483477|CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 6, identity: 0.812

--gggcatctggatcagatgatggctcagctcaa	CRISPR spacer
ttctgcatc--gagcagatgatggcgcagctcaa	Protospacer
    *****  ** *********** ********

262. spacer 3.28|1034460|32|LS483477|CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 6, identity: 0.812

--gggcatctggatcagatgatggctcagctcaa	CRISPR spacer
ttctgcatc--gagcagatgatggcgcagctcaa	Protospacer
    *****  ** *********** ********

263. spacer 3.34|1034826|32|LS483477|CRISPRCasFinder,CRT matches to NC_018687 (Bacillus thuringiensis MC28 plasmid pMC189, complete sequence) position: , mismatch: 6, identity: 0.812

-gcgagaacgttggtagtgttaactataaaatg	CRISPR spacer
tgcga-tgcgttagtagtattaactataaaatt	Protospacer
 ****  .****.*****.*************

264. spacer 3.36|1034948|32|LS483477|CRISPRCasFinder,CRT matches to MK719750 (Rheinheimera phage vB_RspM_Barba31A, complete genome) position: , mismatch: 6, identity: 0.812

gctggttttaacccactgctagtaaaacgata	CRISPR spacer
gttactattaacccactgccagtaaaacgatc	Protospacer
*.*. * ************.***********

265. spacer 3.36|1034948|32|LS483477|CRISPRCasFinder,CRT matches to NC_048190 (Rheinheimera phage vB_RspM_Barba19A, complete genome) position: , mismatch: 6, identity: 0.812

gctggttttaacccactgctagtaaaacgata	CRISPR spacer
gttactattaacccactgccagtaaaacgatc	Protospacer
*.*. * ************.***********

266. spacer 4.9|2221514|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022659 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence) position: , mismatch: 6, identity: 0.812

agttccaacacaacaggcggtcataaccattc	CRISPR spacer
tcatctgacacaacaggcggtcacaaccattc	Protospacer
   **..****************.********

267. spacer 3.5|1033057|32|LS483477|CRISPRCasFinder,CRT matches to HG796310 (Uncultured bacterium plasmid pRGI00361) position: , mismatch: 7, identity: 0.781

ccgtcgt-ttgaaccagttgatgcagaagtgag	CRISPR spacer
-ggtgatgttgaaccagttgttgaagaagtgaa	Protospacer
  ** .* ************ ** ********.

268. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NC_048791 (Corynebacterium phage Adelaide, complete genome) position: , mismatch: 7, identity: 0.781

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
aatgctcatcaccatcatcagccacggcacga	Protospacer
 *. * ***** *****************  *

269. spacer 3.8|1033240|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 7, identity: 0.781

tgaaaccggcaggctttccgctcttgccgcag	CRISPR spacer
gtttgccggccggctttccactcttgccgcag	Protospacer
    .***** ********.************

270. spacer 3.8|1033240|32|LS483477|CRISPRCasFinder,CRT matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 7, identity: 0.781

tgaaaccggcaggctttccgctcttgccgcag	CRISPR spacer
cgacaccggcaggctttccgctcatgaccatg	Protospacer
.** ******************* ** *   *

271. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
aactaaaaaatataaaaatatatattaattta	Protospacer
   *  ********** ** ************

272. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_AP017382 (Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaaacataaaaatttatattgggcca	Protospacer
**********.***** *********.. ..*

273. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tttaactaaatataaacatttatatcaatata	Protospacer
**   . ******************.*** **

274. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_KT020842 (Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tatagttaaatataaacatgtatattaagtta	Protospacer
*    * ************ ******** ***

275. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_010281 (Bacillus thuringiensis plasmid pFR12, complete sequence) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttaaccaaaatataaaaaattatattaattat	Protospacer
*** ..********** * ***********

276. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tcatcaacaatatcaacatttatattattttt	Protospacer
*.**. * ***** ************* ***

277. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to MN694659 (Marine virus AFVG_250M322, complete genome) position: , mismatch: 7, identity: 0.781

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ggatttaaaatatcaacacttatatttttata	Protospacer
  *********** ****.*******  * **

278. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.781

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
cgcggatgccccgcggcggccgtttgactgga	Protospacer
***.******* *********** .  *** *

279. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN478377 (Bacteriophage Eos, complete genome) position: , mismatch: 7, identity: 0.781

-acggggtataatattaaaattattaagttggt	CRISPR spacer
tgcgcag-ataatattaaagttattacgttgtt	Protospacer
 .** .* ***********.****** **** *

280. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_031059 (Rhodovulum phage vB_RhkS_P1, complete genome) position: , mismatch: 8, identity: 0.75

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
cgctcggcctgggcggcggcgatctccgcctg	Protospacer
* * . . ************* *********

281. spacer 2.6|1014568|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcccctgcggactgctcagactggtactca	CRISPR spacer
catcggcaccggcctgctcacactggtactca	Protospacer
*  *  *  *** ******* ***********

282. spacer 2.7|1014629|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_012439 (Persephonella marina EX-H1 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tgtttctgatgcccttaatccaaaacacagca	CRISPR spacer
ggcttctgatacccttaaaccaaaaccataca	Protospacer
 *.*******.******* *******   .**

283. spacer 2.8|1014690|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

ggacgctggcatataccagcaccatgacatag	CRISPR spacer
cgacgccggcatagaccagcaccatggcggtc	Protospacer
 *****.****** ************.*.

284. spacer 2.9|1014751|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcggtgcggcatgagcaatacattttttatca	CRISPR spacer
ctgaaatgacatgagcaatccattttttatca	Protospacer
 .*. ..*.********** ************

285. spacer 2.13|1014997|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aattaattt--aatcacgccagcctcacaatata	CRISPR spacer
--ctcgcttcaaatcacgccagcctcagaaaata	Protospacer
  .* ..**  **************** ** ***

286. spacer 3.2|1032874|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP045419 (Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence) position: , mismatch: 8, identity: 0.75

cacg-gaagtgattgccacttcggtgattttgg	CRISPR spacer
-atgtgcgctgattgccactccagtgattttga	Protospacer
 *.* * . ***********.*.*********.

287. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
tttctccgtcagcatcgtcagccgcggcaacg	Protospacer
* .*. *.********.******.*******.

288. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP045917 (Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence) position: , mismatch: 8, identity: 0.75

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
ctccagcatcagcttcatcagccacctcgact	Protospacer
. ** ******** ***********  *.**

289. spacer 3.8|1033240|32|LS483477|CRISPRCasFinder,CRT matches to NC_003324 (Sinorhizobium phage PBC5, complete genome) position: , mismatch: 8, identity: 0.75

tgaaaccggcaggctttccgctcttgccgcag	CRISPR spacer
tcgggcgggcaagctttccgctctcgccgccg	Protospacer
* ...* ****.************.***** *

290. spacer 3.8|1033240|32|LS483477|CRISPRCasFinder,CRT matches to AF448724 (Sinorhizobium meliloti phage PBC5, complete genome) position: , mismatch: 8, identity: 0.75

tgaaaccggcaggctttccgctcttgccgcag	CRISPR spacer
tcgggcgggcaagctttccgctctcgccgccg	Protospacer
* ...* ****.************.***** *

291. spacer 3.13|1033545|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP016850 (Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence) position: , mismatch: 8, identity: 0.75

gaaccgtaaacccggcatcacgg----agcgcagtg	CRISPR spacer
gatccgtaaacccgccatcacggtcttcccgc----	Protospacer
** *********** ********      ***

292. spacer 3.18|1033850|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024444 (Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgctctcattttttcctgaatttcagcagca	CRISPR spacer
ttgaaaacattttttcttgaatttcagcatca	Protospacer
..*    *********.************ **

293. spacer 3.18|1033850|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 8, identity: 0.75

ccgctctcattttttcctgaatttcagcagca	CRISPR spacer
ttgaaaacattttttcttgaatttcagcatca	Protospacer
..*    *********.************ **

294. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

295. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggccggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

296. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

297. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

298. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgta--ttcgcaacgg	CRISPR spacer
cgagggcatcaggccgggcgtatttttgcgcc--	Protospacer
 *****.****** ********  **.**. *

299. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

300. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

301. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

302. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

303. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

304. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

305. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

306. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

307. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

308. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

309. spacer 3.21|1034033|32|LS483477|CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 8, identity: 0.75

ggagggtatcagggcgggcgtattcgcaacgg	CRISPR spacer
cgagggtgtcagggctggcgtattgccctcgt	Protospacer
 ******.******* ********  *  **

310. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
gtatttaatttataaacatttatatttccatt	Protospacer
 *******  ****************  . *

311. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tcatttaaaatataaccatttttatgcataac	Protospacer
*.************* ***** ***  **

312. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tcatttaaaatataaccatttttatgcataac	Protospacer
*.************* ***** ***  **

313. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039210 (Piscirickettsia salmonis strain Psal-103 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

314. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP048067 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

315. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039033 (Piscirickettsia salmonis strain Psal-070 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

316. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038894 (Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

317. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038924 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

318. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038953 (Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

319. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038958 (Piscirickettsia salmonis strain Psal-041 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

320. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039196 (Piscirickettsia salmonis strain Psal-161 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

321. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038812 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

322. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024182 (Moraxella osloensis strain KSH plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

---ttatttaaaatataaacatttatattaattta	CRISPR spacer
agacgatt---aataaaaacatttattttaatttt	Protospacer
   . ***   **** ********** *******

323. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013769 (Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

324. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_012219 (Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tcatttagaatataaacatatatatatataag	Protospacer
*.*****.*********** *****  **  .

325. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024449 (Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence) position: , mismatch: 8, identity: 0.75

---ttatttaaaatataaacatttatattaattta	CRISPR spacer
agacgatt---aataaaaacatttattttaatttt	Protospacer
   . ***   **** ********** *******

326. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP033942 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-5, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

327. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013763 (Piscirickettsia salmonis strain PM21567A plasmid p1PS2, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

328. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013761 (Piscirickettsia salmonis strain AY6492A plasmid p4PS1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

329. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013774 (Piscirickettsia salmonis strain PM37984A plasmid p1PS4, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

330. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013779 (Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

331. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024187 (Moraxella osloensis strain TT16 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

---ttatttaaaatataaacatttatattaattta	CRISPR spacer
agacgatt---aataaaaacatttattttaatttt	Protospacer
   . ***   **** ********** *******

332. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP050945 (Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

333. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP029459 (Clostridium novyi strain 150557 plasmid pCN1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tcatttagaatataaacatatatatatataag	Protospacer
*.*****.*********** *****  **  .

334. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038892 (Piscirickettsia salmonis strain Psal-005 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

335. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038914 (Piscirickettsia salmonis strain Psal-010a plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

336. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038968 (Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

337. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039202 (Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

338. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039205 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

339. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039042 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

340. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039182 (Piscirickettsia salmonis strain Psal-158 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

341. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039187 (Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

342. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038948 (Piscirickettsia salmonis strain Psal-028 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

343. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038933 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

344. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038973 (Piscirickettsia salmonis strain Psal-069 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

345. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024178 (Moraxella osloensis strain YHS plasmid pYHS2, complete sequence) position: , mismatch: 8, identity: 0.75

---ttatttaaaatataaacatttatattaattta	CRISPR spacer
agacgatt---aataaaaacatttattttaatttt	Protospacer
   . ***   **** ********** *******

346. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039036 (Piscirickettsia salmonis strain Psal-071 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

347. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039066 (Piscirickettsia salmonis strain Psal-107 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

348. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038887 (Piscirickettsia salmonis strain Psal-004 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

349. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039215 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

350. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038938 (Piscirickettsia salmonis strain Psal-026 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

351. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038963 (Piscirickettsia salmonis strain Psal-051 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

352. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038877 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

353. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038882 (Piscirickettsia salmonis strain Psal-003 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta--	CRISPR spacer
atatttaaaatataaacagtttta--agcttgtc	Protospacer
 ***************** ** **  *..**.

354. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to AP018715 (Enterococcus phage phiM1EF22 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaaa	Protospacer
********* ***** *******   **   *

355. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to MK721192 (Enterococcus phage vB_EfaM_Ef2.3, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaga	Protospacer
********* ***** *******   **   *

356. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to AP018714 (Enterococcus phage phiEF17H DNA, complete sequence) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaattataaccatttatcagaaaaga	Protospacer
********* ***** *******   **   *

357. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to HM029250 (Lactococcus phage 949, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
aaaagtcaaatataaacatttttatttattaa	Protospacer
  *  * ************** **** *** *

358. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_009904 (Enterococcus phage phiEF24C, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaaa	Protospacer
********* ***** *******   **   *

359. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to AP009390 (Enterococcus phage phiEF24C DNA, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaaa	Protospacer
********* ***** *******   **   *

360. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to GQ452243 (Enterococcus phage phiEf11, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
aaatttaaaaaataaacatttacatagttgta	Protospacer
  ******** ***********.** . * **

361. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to MN854830 (Enterococcus phage PBEF129, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaaa	Protospacer
********* ***** *******   **   *

362. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to KJ801817 (Enterococcus phage ECP3, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaaa	Protospacer
********* ***** *******   **   *

363. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to AB609718 (Enterococcus phage phiEF24C-P2 DNA, complete genome) position: , mismatch: 8, identity: 0.75

ttatttaaaatataaacatttatattaattta	CRISPR spacer
ttatttaaactataaccatttatcagaaaaaa	Protospacer
********* ***** *******   **   *

364. spacer 3.27|1034399|32|LS483477|CRISPRCasFinder,CRT matches to JN192400 (Staphylococcus phage vB_SepiS-phiIPLA5, complete genome) position: , mismatch: 8, identity: 0.75

ttgatatgactttatctagatcgcgattctga	CRISPR spacer
ttgatatgtctttatctaaatcgcgagctaat	Protospacer
******** *********.******* .. .

365. spacer 3.31|1034643|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

ctaaccgccaacgaaaaggcggtttatctggc	CRISPR spacer
ctgaccgccgacgaaaaggcggtcttccgcac	Protospacer
**.******.*************.* .*  .*

366. spacer 3.34|1034826|32|LS483477|CRISPRCasFinder,CRT matches to AP014249 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C17, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

gcgagaacgttggtagtgttaactataaaatg	CRISPR spacer
tccttaacgttgatagtgttaactataagact	Protospacer
 *   *******.***************.*.

367. spacer 4.2|2221087|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.75

gaactggataacagtcgccagttcaggagttt	CRISPR spacer
tccctcaataacagccgcctgttcaggagtta	Protospacer
   ** .*******.**** ***********

368. spacer 4.4|2221209|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.75

cgtttttcctgttcgtgccggcccggcgaaaa	CRISPR spacer
agtttttcctgttcctggcggcccccacacaa	Protospacer
 ************* ** ******    * **

369. spacer 4.5|2221270|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.75

cgtttttcctgttcgtgccggcccggcgaaaa	CRISPR spacer
agtttttcctgttcctggcggcccccacacaa	Protospacer
 ************* ** ******    * **

370. spacer 4.7|2221392|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KX190833 (Bacillus phage vB_BtS_BMBtp14, complete genome) position: , mismatch: 8, identity: 0.75

gccatacttgtatccttgatttttcaaagaac	CRISPR spacer
gctcaaagagtactcttgatttttcaaagaac	Protospacer
**.  *   ***..******************

371. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022622 (Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1) position: , mismatch: 9, identity: 0.719

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
acctggcgctgggcggcggcgatcgccgccgc	Protospacer
 .*    ************** ** ***** *

372. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022622 (Mycobacteroides abscessus strain JCM 30620 plasmid pJCM30620_1) position: , mismatch: 9, identity: 0.719

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
acctggcgctgggcggcggcgatcgccgccgc	Protospacer
 .*    ************** ** ***** *

373. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_021279 (Mycobacteroides abscessus subsp. bolletii 50594 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
acctggcgctgggcggcggcgatcgccgccgc	Protospacer
 .*    ************** ** ***** *

374. spacer 2.9|1014751|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to KX349315 (Cyanophage S-RIM12 isolate RW_14_0101, complete genome) position: , mismatch: 9, identity: 0.719

gcggtgcggcatgagcaatacattttttatca	CRISPR spacer
tgtatccatcatgagtaatacatttgttatca	Protospacer
   .* *. ******.********* ******

375. spacer 2.15|1015119|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtaacgttgccgttctctacgatattgacctg	CRISPR spacer
cgcgccttgccgtcctctacgatcttgactgg	Protospacer
   .* *******.********* *****. *

376. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH809532 (Burkholderia phage phiE131, complete genome) position: , mismatch: 9, identity: 0.719

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ttgaacaaccagttccagctctcgatcatggt	Protospacer
..** . ********  *************

377. spacer 2.16|1015180|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH809533 (Burkholderia phage phiE058, complete genome) position: , mismatch: 9, identity: 0.719

ccgattcaccagttcacgctctcgatcatgca	CRISPR spacer
ttgaacaaccagttccagctctcgatcatggt	Protospacer
..** . ********  *************

378. spacer 3.6|1033118|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.719

attaaagccgcagccaggcgtatcagggagaa	CRISPR spacer
gctagcgccgcatccaggcgtgtcagggaacc	Protospacer
..**. ****** ********.*******.

379. spacer 3.6|1033118|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 9, identity: 0.719

attaaagccgcagccaggcgtatcagggagaa	CRISPR spacer
gctagcgccgcatccaggcgtgtcagggaacc	Protospacer
..**. ****** ********.*******.

380. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 9, identity: 0.719

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cagcatcatcagcatcatcagcagcggcagtc	Protospacer
.* *  **************** .*****..

381. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to AP013535 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G5, isolate: uvMED-CGR-U-MedDCM-OCT-S30-C10) position: , mismatch: 9, identity: 0.719

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
caactaacgcagcatcatcagctacggcagca	Protospacer
.* *..   *************.******.**

382. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MN234170 (Mycobacterium phage MalagasyRose, complete genome) position: , mismatch: 9, identity: 0.719

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
ctgcaccgccagcatcatcagccgccgcaaca	Protospacer
.  *  *..**************.* ******

383. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to KY224000 (Mycobacterium phage Rich, complete genome) position: , mismatch: 9, identity: 0.719

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
tgacggcatcagcatcatccgcgacggctcgc	Protospacer
*. * ************** ** *****

384. spacer 3.8|1033240|32|LS483477|CRISPRCasFinder,CRT matches to NC_014642 (Achromobacter xylosoxidans A8 plasmid pA82, complete sequence) position: , mismatch: 9, identity: 0.719

tgaaaccggcaggctttccgctcttgccgcag	CRISPR spacer
acaaaccggcgagctttccgctcttcgcctcg	Protospacer
  ********..*************  * . *

385. spacer 3.20|1033972|32|LS483477|CRISPRCasFinder,CRT matches to NC_028998 (Phormidium phage MIS-PhV1B, complete genome) position: , mismatch: 9, identity: 0.719

gtgatgattcaggaaaacaaactgcctgtagt	CRISPR spacer
tggatgattaaggaaaacaaagtgccctcaac	Protospacer
  ******* *********** ****. .*..

386. spacer 3.20|1033972|32|LS483477|CRISPRCasFinder,CRT matches to KF437907 (Phormidium phage MIS-PhV1A, complete genome) position: , mismatch: 9, identity: 0.719

gtgatgattcaggaaaacaaactgcctgtagt	CRISPR spacer
tggatgattaaggaaaacaaagtgccctcaac	Protospacer
  ******* *********** ****. .*..

387. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_015712 (Clostridium perfringens plasmid pCPPB-1, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
aaaaatataatataaatatttatattaataat	Protospacer
  *  ** ********.************

388. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_007772 (Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
aaaaatataatataaatatttatattaataat	Protospacer
  *  ** ********.************

389. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039090 (Piscirickettsia salmonis strain Psal-111 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

390. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039115 (Piscirickettsia salmonis strain Psal-135 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

391. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039063 (Piscirickettsia salmonis strain Psal-099 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

392. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038906 (Piscirickettsia salmonis strain Psal-008 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

393. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038926 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

394. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038929 (Piscirickettsia salmonis strain Psal-013 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

395. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039174 (Piscirickettsia salmonis strain Psal-138 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

396. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP012510 (Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-2, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

397. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013788 (Piscirickettsia salmonis strain PM58386B plasmid p2PS7, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

398. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013823 (Piscirickettsia salmonis strain PM25344B plasmid p2PS14, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

399. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013803 (Piscirickettsia salmonis strain PM22180B plasmid p2PS13, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

400. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP011852 (Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

401. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039206 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

402. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039073 (Piscirickettsia salmonis strain Psal-108 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

403. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039100 (Piscirickettsia salmonis strain Psal-117 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

404. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039105 (Piscirickettsia salmonis strain Psal-118 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

405. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039179 (Piscirickettsia salmonis strain Psal-139 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

406. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039110 (Piscirickettsia salmonis strain Psal-134 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

407. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039053 (Piscirickettsia salmonis strain Psal-081 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

408. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013948 (Piscirickettsia salmonis strain PSCGR01 plasmid pPsCRG01-3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

409. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039058 (Piscirickettsia salmonis strain Psal-098 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

410. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039079 (Piscirickettsia salmonis strain Psal-109 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

411. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039084 (Piscirickettsia salmonis strain Psal-110 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

412. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038935 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

413. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038921 (Piscirickettsia salmonis strain Psal-010b plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

414. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP038902 (Piscirickettsia salmonis strain Psal-006b plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

415. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013808 (Piscirickettsia salmonis strain PM31429B plasmid p2PS12, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

416. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP048061 (Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p5, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

417. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP048061 (Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p5, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

418. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP013783 (Piscirickettsia salmonis strain PM49811B plasmid p2PS6, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

419. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP048054 (Piscirickettsia salmonis strain Ps-11091B plasmid Ps11091B-p2, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
atatttaaaatattaagatttataaagataac	Protospacer
 ************ ** *******  .**

420. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NC_017140 (Bacillus megaterium WSH-002 plasmid WSH-002_p2, complete sequence) position: , mismatch: 9, identity: 0.719

ttatttaaaatataaacatttatattaattta	CRISPR spacer
gtttttaaaagataaacatttgtattttatcc	Protospacer
 * ******* **********.****   *.

421. spacer 3.28|1034460|32|LS483477|CRISPRCasFinder,CRT matches to NZ_LT222315 (Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T3) position: , mismatch: 9, identity: 0.719

gggcatctggatcagatgatggctcagctcaa	CRISPR spacer
ggctatctgcatcagatgaaggctcagggggt	Protospacer
** .***** ********* *******   .

422. spacer 3.28|1034460|32|LS483477|CRISPRCasFinder,CRT matches to NZ_LT963397 (Pseudomonas cerasi isolate PL963 plasmid PP2, complete sequence) position: , mismatch: 9, identity: 0.719

gggcatctggatcagatgatggctcagctcaa	CRISPR spacer
ggctatctgcatcagatgaaggctcagggggt	Protospacer
** .***** ********* *******   .

423. spacer 3.34|1034826|32|LS483477|CRISPRCasFinder,CRT matches to MN693746 (Marine virus AFVG_250M731, complete genome) position: , mismatch: 9, identity: 0.719

gcgagaacgttggtagtgttaactataaaatg	CRISPR spacer
gtgttgttgttggtagtgttgactagaaaatt	Protospacer
*.*  . .************.**** *****

424. spacer 3.37|1035009|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgcgccaatccgccttcggtgcgtatcac	CRISPR spacer
gggcgctccaatccgccttcggcgcctggggt	Protospacer
 ***** ***************.** *.  ..

425. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 9, identity: 0.719

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
tgcacatggccggcggcggccgtatttcccgc	Protospacer
.*** *** ***************.*.*.

426. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
cgcggacgcccggcggcggccgtcacctgaaa	Protospacer
***.**.****************  .*. . *

427. spacer 4.4|2221209|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021918 (Sagittula sp. P11 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttttcctgttcgtgccggcccggcgaaaa	CRISPR spacer
ctgatgacctgttcgtccctgcccggcgaagg	Protospacer
*   *  ********* ** **********..

428. spacer 4.5|2221270|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021918 (Sagittula sp. P11 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttttcctgttcgtgccggcccggcgaaaa	CRISPR spacer
ctgatgacctgttcgtccctgcccggcgaagg	Protospacer
*   *  ********* ** **********..

429. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.719

acggggtataatattaaaattattaagttggt	CRISPR spacer
agaactgttaacattaaaattattaatttggt	Protospacer
* ..    ***.************** *****

430. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

acggggtataatattaaaattattaagttggt	CRISPR spacer
taaagaaataaaattaaaatgattaagttgtt	Protospacer
  ..*. **** ******** ********* *

431. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

acggggtataatattaaaattattaagttggt	CRISPR spacer
attaagtaaaatatttaaattattaagtccat	Protospacer
*. ..*** ****** ************. .*

432. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027024 (Streptomyces sp. WAC00288 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
ccggcatcctgggcggcggcgttcccctcctg	Protospacer
*. ..   ****************.** ***

433. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 10, identity: 0.688

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
gcggcccgctgggccgcggcgatctccgccgc	Protospacer
 . ... ******* ****** ******** *

434. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.688

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
tgggccaactgggcggcggagttcgccgcctt	Protospacer
.  ...*.*********** **** ******.

435. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_004719 (Streptomyces avermitilis MA-4680 = NBRC 14893 plasmid SAP1, complete sequence) position: , mismatch: 10, identity: 0.688

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
tgggcacgctgggcggcggcgtactcctccgc	Protospacer
.  ..  *************** **** ** *

436. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
tggctcggctgggcggcggcgctcgccgccat	Protospacer
.   *..**************.** ***** .

437. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK977706 (Corynebacterium phage Dina, complete genome) position: , mismatch: 10, identity: 0.688

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
aagtatgcctgggcggcggcgatctccggctt	Protospacer
     *. ************* ****** **.

438. spacer 2.6|1014568|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MH617638 (Microviridae sp. isolate ctib106, complete genome) position: , mismatch: 10, identity: 0.688

ctgcccctgcggactgctcagactggtactca	CRISPR spacer
actaatttgcggactgctcagattgctactga	Protospacer
 .   ..***************.** **** *

439. spacer 2.9|1014751|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016310 (Vibrio scophthalmi strain VS-12 plasmid pVS53, complete sequence) position: , mismatch: 10, identity: 0.688

gcggtgcggcatgagcaatacattttttatca	CRISPR spacer
aatccatgacatgaggaataccttttttatca	Protospacer
.   ...*.****** ***** **********

440. spacer 2.9|1014751|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016310 (Vibrio scophthalmi strain VS-12 plasmid pVS53, complete sequence) position: , mismatch: 10, identity: 0.688

gcggtgcggcatgagcaatacattttttatca	CRISPR spacer
aatccatgacatgaggaataccttttttatca	Protospacer
.   ...*.****** ***** **********

441. spacer 3.3|1032935|32|LS483477|CRISPRCasFinder,CRT matches to LR745207 (uncultured phage genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688

ggcagcgcacagggcgtttggatttttcttcg	CRISPR spacer
aggtaagcccagggcgtttgtatttttctatc	Protospacer
.*  . ** *********** ******** .

442. spacer 3.5|1033057|32|LS483477|CRISPRCasFinder,CRT matches to NC_021560 (Rhizobium phage RR1-A genomic sequence) position: , mismatch: 10, identity: 0.688

ccgtcgtttgaaccagttgatgcagaagtgag	CRISPR spacer
acgacgattgaaccagttgatgcatccccggt	Protospacer
 ** ** *****************    .*.

443. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
ggaacgcatcatcatgatcagccacggccttg	Protospacer
 .  ******* *** ************  ..

444. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MK524490 (Mycobacterium phage Donny, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

445. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MH727561 (Mycobacterium phage Serendipitous, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

446. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to NC_022063 (Mycobacterium phage Phelemich, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

447. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to JN699007 (Mycobacterium phage Acadian, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

448. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to KF024727 (Mycobacterium phage Reprobate, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

449. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to MT889381 (Mycobacterium phage Suigeneris, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

450. spacer 3.7|1033179|32|LS483477|CRISPRCasFinder,CRT matches to KR080199 (Mycobacterium phage Baee, complete genome) position: , mismatch: 10, identity: 0.688

tacccgcatcagcatcatcagccacggcaaca	CRISPR spacer
cgacggcatcagcatcatccgcgacggctcgc	Protospacer
.. * ************** ** *****

451. spacer 3.18|1033850|32|LS483477|CRISPRCasFinder,CRT matches to MG592570 (Vibrio phage 1.199.B._10N.286.55.C10, partial genome) position: , mismatch: 10, identity: 0.688

ccgctctcattttttcctgaatttcagcagca	CRISPR spacer
gtccgtccatttttttctgcatttcagcaggc	Protospacer
 . * ..********.*** **********

452. spacer 3.18|1033850|32|LS483477|CRISPRCasFinder,CRT matches to MG592569 (Vibrio phage 1.199.A._10N.286.55.C10, partial genome) position: , mismatch: 10, identity: 0.688

ccgctctcattttttcctgaatttcagcagca	CRISPR spacer
gtccgtccatttttttctgcatttcagcaggc	Protospacer
 . * ..********.*** **********

453. spacer 3.18|1033850|32|LS483477|CRISPRCasFinder,CRT matches to MG592477 (Vibrio phage 1.105.O._10N.286.49.B4, partial genome) position: , mismatch: 10, identity: 0.688

ccgctctcattttttcctgaatttcagcagca	CRISPR spacer
gtccgtccatttttttctgcatttcagcaggc	Protospacer
 . * ..********.*** **********

454. spacer 3.22|1034094|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP053847 (Campylobacter sp. CCUG 57310 plasmid pCORI-2, complete sequence) position: , mismatch: 10, identity: 0.688

ttatttaaaatataaacatttatattaattta	CRISPR spacer
tgcaataacatataaacatttatgttaagaat	Protospacer
*    *** **************.****

455. spacer 3.30|1034582|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP039225 (Piscirickettsia salmonis strain NVI 5692 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.688

aaacaactcttcaagatgttcagcggtgatgc	CRISPR spacer
taacaactcttcaacatcttcagccgcaggag	Protospacer
 ************* ** ****** *... .

456. spacer 4.3|2221148|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 10, identity: 0.688

cgcagatgcccggcggcggccgtactcctgta	CRISPR spacer
agcagatgcgcggccgcggccgtaaggtcgat	Protospacer
 ******** **** *********   ..*

457. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009065 (Borreliella afzelii K78 plasmid lp28-4, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
attatatataatattaaaataattaaatttag	Protospacer
*. . .************** *****.** .

458. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009065 (Borreliella afzelii K78 plasmid lp28-4, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
attatatataatattaaaataattaaatttag	Protospacer
*. . .************** *****.** .

459. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030883 (Lactobacillus plantarum strain nF1 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
gtatcgtatacttttaaaattattaagtcagc	Protospacer
...  ***** * ***************..*.

460. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033891 (Lactobacillus plantarum strain LMT1-48 plasmid p_3, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
gtatcgtatacttttaaaattattaagtcagc	Protospacer
...  ***** * ***************..*.

461. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018178 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-2, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
gtatcgtatacttttaaaattattaagtcagc	Protospacer
...  ***** * ***************..*.

462. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_017234 (Borreliella afzelii PKo plasmid lp28-4, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
attatatataatattaaaataattaaatttag	Protospacer
*. . .************** *****.** .

463. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_017234 (Borreliella afzelii PKo plasmid lp28-4, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
attatatataatattaaaataattaaatttag	Protospacer
*. . .************** *****.** .

464. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025283 (Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
gtatcgtatacttttaaaattattaagtcagc	Protospacer
...  ***** * ***************..*.

465. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MN855801 (Bacteriophage sp. isolate 103, complete genome) position: , mismatch: 10, identity: 0.688

acggggtataatattaaaattattaagttggt	CRISPR spacer
taggggtatactattaaaatttttattatcag	Protospacer
  ******** ********** ***   * .

466. spacer 4.25|2222490|32|LS483477|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 10, identity: 0.688

gcggcaggatgaataagcatatcgagagaatg	CRISPR spacer
ccggcaggatgaacaagcagatcgccggcgat	Protospacer
 ************.***** ****  .* .

467. spacer 2.3|1014385|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039912 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence) position: , mismatch: 11, identity: 0.656

ctcattagctgggcggcggcgttctccgcctc	CRISPR spacer
aagccggactgggcgacggcgttctgcgcctg	Protospacer
    . ..*******.********* *****

468. spacer 2.20|1015425|32|LS483477|CRISPRCasFinder,CRT matches to KP007359 (Enterobacteria phage vB_EcoM_VR5, complete genome) position: , mismatch: 11, identity: 0.656

tgtatgtcgttaatatggggatcgctgaggtc	CRISPR spacer
atgatgtcgttaatatgggtatccctagcaag	Protospacer
   **************** *** **.. .

469. spacer 3.5|1033057|32|LS483477|CRISPRCasFinder,CRT matches to MN694458 (Marine virus AFVG_250M890, complete genome) position: , mismatch: 11, identity: 0.656

ccgtcgtttgaaccagttgatgcagaagtgag	CRISPR spacer
gaagttattgaaccagttgttccagaagtgga	Protospacer
  . .  ************ * ********..

470. spacer 4.17|2222002|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 11, identity: 0.656

tggattcccggactggcgatttttctgtattt	CRISPR spacer
acagcagtgggactggcgatttttgtatattt	Protospacer
  ...  . *************** *.*****

471. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 11, identity: 0.656

acggggtataatattaaaattattaagttggt	CRISPR spacer
tatttttatatttttaaaattattaagtttta	Protospacer
      **** * ****************

472. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to MK804893 (Aeromonas phage 2-L372D, complete genome) position: , mismatch: 11, identity: 0.656

acggggtataatattaaaattattaagttggt	CRISPR spacer
cttaactataatattaaatttatcaagtttaa	Protospacer
 . .. ************ ****.***** .

473. spacer 4.23|2222368|32|LS483477|PILER-CR,CRISPRCasFinder,CRT matches to NC_048770 (Aeromonas phage 2_L372X, complete genome) position: , mismatch: 11, identity: 0.656

acggggtataatattaaaattattaagttggt	CRISPR spacer
cttaactataatattaaatttatcaagtttaa	Protospacer
 . .. ************ ****.***** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

110765 : 118465

Morganella_phage(66.67%)

integrase

attL 106996:107012|attR 118660:118676

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
106996:107012	attL	NA	NA	NA	NA
SQI67330.1\|110765_112895_-	P4 alpha zinc-binding domain-containing protein	A0A1W6JPG0	Morganella_phage	1.7e-124	41.9
SQI67331.1\|112891_113206_-	Uncharacterised protein	NA	NA	NA	NA
SQI67332.1\|113212_113443_-	Uncharacterised protein	NA	NA	NA	NA
SQI67333.1\|113435_113645_-	phage-like protein	K7PHG9	Enterobacteria_phage	1.0e-10	53.4
SQI67334.1\|113641_113857_-	Uncharacterised protein	NA	NA	NA	NA
SQI67335.1\|113853_114729_-	Site-specific recombinase XerC	NA	NA	NA	NA
SQI67336.1\|114721_114910_-	Uncharacterised protein	NA	NA	NA	NA
SQI67337.1\|115039_115213_+	Uncharacterised protein	A0A2H4JB52	uncultured_Caudovirales_phage	1.4e-05	51.2
SQI67338.1\|115261_115831_-	Putative cytoplasmic protein	A0A1W6JPH8	Morganella_phage	5.1e-60	67.7
SQI67339.1\|115875_116076_-	Prophage CP4-57 regulatory protein (AlpA)	NA	NA	NA	NA
SQI67340.1\|116170_117112_-	Uncharacterised protein	A0A1W6JPD1	Morganella_phage	6.4e-07	48.3
SQI67341.1\|117205_118465_-\|integrase	site-specific recombinase, phage integrase family protein	A0A1W6JPG6	Morganella_phage	1.5e-197	78.8
118660:118676	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1193897 : 1202831

Enterobacteria_phage(85.71%)

capsid,integrase

attL 1198666:1198681|attR 1205446:1205461

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI68349.1\|1193897_1196231_-	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.4
SQI68350.1\|1196245_1196566_-	putative prophage protein	NA	NA	NA	NA
SQI68351.1\|1196562_1196790_-	bacteriophage protein	NA	NA	NA	NA
SQI68352.1\|1196786_1196981_-	phage immunity repressor protein	Q7M2A7	Enterobacteria_phage	1.9e-22	87.1
SQI68353.1\|1197334_1197601_-	phage DNA binding protein	Q7M299	Enterobacteria_phage	2.6e-30	71.6
SQI68354.1\|1198138_1198876_+\|capsid	bacteriophage capsid protein	Q7M2A2	Enterobacteria_phage	4.4e-80	64.4
1198666:1198681	attL	NA	NA	NA	NA
SQI68355.1\|1198872_1199118_+	phage transcriptional activator, Ogr/delta	Q7M294	Enterobacteria_phage	6.3e-31	76.5
SQI68356.1\|1199134_1199701_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	7.7e-56	62.7
SQI68357.1\|1200108_1201002_+	Uncharacterised protein	NA	NA	NA	NA
SQI68358.1\|1201001_1201607_+	Uncharacterised protein	NA	NA	NA	NA
SQI68359.1\|1201637_1202831_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	8.2e-108	50.4
1205446:1205461	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1725783 : 1734350

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI69144.1\|1725783_1726731_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-23	30.8
SQI69145.1\|1726714_1727446_+	putative permease transmembrane component	NA	NA	NA	NA
SQI69150.1\|1727426_1727534_-	membrane protein	NA	NA	NA	NA
SQI69151.1\|1727593_1728325_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
SQI69157.1\|1728547_1730233_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	2.2e-276	90.6
SQI69158.1\|1730229_1730949_+	two-component system response regulator	NA	NA	NA	NA
SQI69159.1\|1730995_1731466_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	8.0e-75	90.4
SQI69160.1\|1731617_1732076_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.9e-55	74.5
SQI69161.1\|1732316_1734350_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	2.8e-55	27.6

DBSCAN-SWA_4

1853897 : 1861681

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI69356.1\|1853897_1855163_+\|transposase	transposase IS1113	A0A218MNI5	uncultured_virus	3.5e-48	49.2
SQI69358.1\|1855219_1855468_-	virulence protein MsgA	S4TND2	Salmonella_phage	1.3e-15	69.0
SQI69359.1\|1855914_1856220_-	Uncharacterized protein yedK	A0A2H4J5W2	uncultured_Caudovirales_phage	3.8e-17	44.2
SQI69360.1\|1856754_1859031_+	thiosulfate reductase	A0A077SK27	Escherichia_phage	1.9e-36	26.8
SQI69361.1\|1859045_1859624_+	thiosulfate reductase electron transport protein PhsB	A0A077SL61	Escherichia_phage	1.5e-22	37.6
SQI69362.1\|1859620_1860385_+	thiosulfate reductase cytochrome b subunit	NA	NA	NA	NA
SQI69363.1\|1860514_1861681_+	penicillin-binding protein	B6DZZ7	Stx2-converting_phage	1.2e-199	87.9

DBSCAN-SWA_5

1995065 : 2037150

Escherichia_phage(34.09%)

portal,lysis,integrase,terminase,tail,head,holin

attL 1994901:1994960|attR 2044715:2044779

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1994901:1994960	attL	NA	NA	NA	NA
SQI69605.1\|1995065_1996076_-\|integrase	integrase	K7PLZ2	Enterobacterial_phage	1.6e-125	64.3
SQI69673.1\|1996075_1996303_-	phage-like protein	K7PHA0	Enterobacterial_phage	7.4e-10	43.3
SQI69675.1\|1996310_1996457_-	Putative bacteriophage protein	A0A1B5FPC2	Escherichia_phage	6.1e-18	79.2
SQI69677.1\|1996456_1996918_-	ATPase involved in DNA repair	A0A1B5FPC7	Escherichia_phage	3.0e-42	50.7
SQI69678.1\|1996914_1997127_-	Uncharacterised protein	A0A286S2B6	Klebsiella_phage	5.4e-23	74.3
SQI69679.1\|1997123_1997348_-	Uncharacterised protein	A0A1B5FPG2	Escherichia_phage	1.7e-19	69.4
SQI69680.1\|1997344_1997767_-	Uncharacterised protein	NA	NA	NA	NA
SQI69681.1\|1997759_1998614_-	putative bacteriophage protein	F1C5A3	Cronobacter_phage	6.4e-131	80.0
SQI69682.1\|1998625_1999021_-	Uncharacterised protein	A0A286S1S2	Klebsiella_phage	4.4e-50	73.9
SQI69683.1\|1999010_1999247_-	Uncharacterised protein	A0A286SGR4	Klebsiella_phage	1.1e-21	65.7
SQI69684.1\|1999246_1999606_-	Uncharacterised protein	A0A1B5FPB3	Escherichia_phage	1.2e-27	54.6
SQI69687.1\|1999586_1999796_-	Uncharacterised protein	NA	NA	NA	NA
SQI69688.1\|1999983_2000169_-	Uncharacterised protein	NA	NA	NA	NA
SQI69691.1\|2000165_2000360_-	Uncharacterised protein	NA	NA	NA	NA
SQI69694.1\|2000352_2000670_-	Uncharacterised protein	A0A286S1T9	Klebsiella_phage	1.8e-17	51.0
SQI69697.1\|2000848_2001538_-	transcriptional regulator	F1C5C2	Cronobacter_phage	4.3e-85	68.0
SQI69698.1\|2001662_2001911_+	DNA-binding protein	A0A2H4JEY0	uncultured_Caudovirales_phage	5.6e-11	52.9
SQI69699.1\|2001873_2002146_+	Uncharacterised protein	A0A1B5FPB9	Escherichia_phage	2.4e-23	71.1
SQI69700.1\|2002402_2002657_+	Uncharacterised protein	NA	NA	NA	NA
SQI69701.1\|2003084_2003210_+	Uncharacterised protein	NA	NA	NA	NA
SQI69702.1\|2003206_2004118_+	DNA-binding protein	Q8W642	Enterobacteria_phage	1.3e-110	68.5
SQI69703.1\|2004133_2005015_+	IstB-like ATP-binding protein	Q8W641	Enterobacteria_phage	2.7e-76	58.9
SQI69704.1\|2005011_2006367_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	4.7e-176	69.2
SQI69714.1\|2006377_2006686_+	Uncharacterised protein	NA	NA	NA	NA
SQI69717.1\|2006682_2007495_+	Phage antitermination protein Q	A0A1B5FPA5	Escherichia_phage	6.8e-114	75.2
SQI69719.1\|2007829_2008042_-	Uncharacterised protein	NA	NA	NA	NA
SQI69725.1\|2010854_2011328_-	GogA	Q9MBM2	Phage_Gifsy-1	3.5e-86	98.1
SQI69727.1\|2011811_2012162_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.2e-46	80.7
SQI69728.1\|2012148_2012598_+	Lysozyme	A0A0M4R365	Salmonella_phage	3.0e-79	97.3
SQI69731.1\|2012594_2013065_+\|lysis	bacteriophage lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-61	81.0
SQI69732.1\|2013238_2013748_+	Uncharacterised protein	NA	NA	NA	NA
SQI69733.1\|2014006_2014552_+\|terminase	terminase	A0A0U2S671	Escherichia_phage	7.4e-56	79.1
SQI69734.1\|2014523_2016455_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	1.7e-259	66.0
SQI69735.1\|2016438_2016642_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
SQI69736.1\|2016599_2018219_+\|portal	phage portal protein, lambda family	K7P6U7	Enterobacteria_phage	2.9e-188	62.6
SQI69737.1\|2018208_2019705_+	scaffold protein	A0A0K2FI53	Enterobacteria_phage	7.4e-98	52.7
SQI69738.1\|2019717_2020065_+	Head decoration protein	A0A2R9YJN3	Escherichia_phage	3.2e-20	53.8
SQI69739.1\|2020119_2021148_+\|head	head protein	C6ZCY2	Enterobacteria_phage	5.0e-114	61.1
SQI69740.1\|2021205_2021565_+	DNA packaging protein	NA	NA	NA	NA
SQI69741.1\|2021575_2021929_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	3.0e-50	80.3
SQI69742.1\|2021940_2022519_+	Gifsy-1 prophagei VmtZ	A0A2R9YJK4	Escherichia_phage	5.0e-79	99.0
SQI69743.1\|2022515_2022911_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	99.2
SQI69744.1\|2022918_2023659_+\|tail	major tail protein	A0A0K2FJ05	Enterobacteria_phage	2.4e-126	95.5
SQI69745.1\|2023674_2024097_+\|tail	minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	3.2e-67	92.9
SQI69746.1\|2024078_2024513_+\|tail	Gifsy-2 prophage putative minor tail protein	A0A0K2FJB3	Enterobacteria_phage	1.5e-64	99.2
SQI69747.1\|2024505_2027067_+\|tail	minor tail protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	88.7
SQI69748.1\|2027063_2027393_+\|tail	tail protein	A0A2R9YJM0	Escherichia_phage	2.4e-54	95.4
SQI69749.1\|2027392_2028091_+\|tail	Phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.0
SQI69750.1\|2028240_2028840_+	Tail fiber component K	K7PLW1	Enterobacteria_phage	6.3e-117	95.0
SQI69751.1\|2028836_2029409_+\|tail	phage tail assembly protein	A0A0K2FJB0	Escherichia_phage	1.3e-82	97.4
SQI69752.1\|2029469_2032868_+	host-specificity protein	A0A0K2FI38	Escherichia_phage	0.0e+00	85.6
SQI69753.1\|2032910_2033489_+\|tail	Phage tail fiber protein	A0A2D1UII2	Escherichia_phage	2.7e-24	55.6
SQI69754.1\|2033485_2033788_+	Uncharacterised protein	NA	NA	NA	NA
SQI69755.1\|2033790_2035146_+	Uncharacterised protein	A0A223LJ40	Erwinia_phage	5.6e-129	55.1
SQI69756.1\|2036910_2037150_+\|tail	Putative prophage tail fibre C-terminus	A0A0P0ZEF0	Stx2-converting_phage	2.3e-17	55.1
2044715:2044779	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2783747 : 2809686

Enterobacteria_phage(36.36%)

protease,transposase,integrase

attL 2806577:2806591|attR 2815435:2815449

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI70965.1\|2783747_2787908_-\|protease	hemoglobin protease	Q9LA54	Enterobacteria_phage	1.2e-302	42.0
SQI70969.1\|2788392_2790471_+	phage-like protein	NA	NA	NA	NA
SQI70973.1\|2790788_2791190_+	Inhibitor of g-type lysozyme	NA	NA	NA	NA
SQI71013.1\|2791285_2791537_+	Uncharacterised protein	NA	NA	NA	NA
SQI71016.1\|2791732_2792023_+	Bor protein	C6ZCX3	Enterobacteria_phage	1.2e-33	71.9
SQI71018.1\|2792507_2793455_+\|protease	outer membrane protease	NA	NA	NA	NA
SQI71021.1\|2793703_2796850_+	phage-like protein	NA	NA	NA	NA
SQI71023.1\|2797067_2797445_-	Uncharacterised protein	NA	NA	NA	NA
SQI71027.1\|2797744_2798086_+\|transposase	transposase IS4 family protein	S5FM71	Shigella_phage	2.8e-21	65.8
SQI71030.1\|2798411_2799599_-	Uncharacterised protein	NA	NA	NA	NA
SQI71033.1\|2800555_2801245_+	Chimeric type III secretion system effector protein	A5LH48	Enterobacteria_phage	3.4e-58	51.7
SQI71036.1\|2801654_2802314_-	type III secretion system effector protein	B6DZC0	Enterobacteria_phage	4.5e-31	38.7
SQI71037.1\|2802532_2802664_-	Uncharacterised protein	NA	NA	NA	NA
SQI71039.1\|2803042_2803252_+\|integrase	prophage lambda integrase (Int(lambda))	Q77Z04	Phage_21	1.2e-09	56.4
SQI71042.1\|2803584_2804043_-\|transposase	transposase for IS200	I4AZI8	Saccharomonospora_phage	7.7e-14	31.5
SQI71043.1\|2804238_2804406_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.7e-19	88.9
SQI71045.1\|2804545_2804899_+	Uncharacterised protein	NA	NA	NA	NA
SQI71046.1\|2805289_2805760_-	Uncharacterised protein	NA	NA	NA	NA
SQI71049.1\|2806184_2806808_+	Gifsy-2 prophage protein	A0A2H4J5W2	uncultured_Caudovirales_phage	9.9e-73	62.8
2806577:2806591	attL	NA	NA	NA	NA
SQI71051.1\|2807114_2809157_-	SspH1	Q9MBL9	Phage_Gifsy-2	9.3e-27	46.9
SQI71053.1\|2809563_2809686_-\|integrase	integrase	A0A077SLK2	Escherichia_phage	5.3e-15	90.0
2815435:2815449	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3088654 : 3098039

uncultured_Caudovirales_phage(14.29%)

protease,integrase

attL 3082091:3082104|attR 3099175:3099188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3082091:3082104	attL	NA	NA	NA	NA
SQI71623.1\|3088654_3088864_-	phage regulatory protein	A0A2H4J8C8	uncultured_Caudovirales_phage	1.3e-08	47.2
SQI71634.1\|3089059_3089920_-	Uncharacterised protein	NA	NA	NA	NA
SQI71636.1\|3089935_3091177_-\|integrase	phage integrase	A0A077KET4	Ralstonia_phage	7.3e-75	40.2
SQI71639.1\|3091716_3093993_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	1.1e-164	42.1
SQI71643.1\|3094023_3094344_-\|protease	ATP-dependent clp protease adaptor protein	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
SQI71645.1\|3094667_3094889_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
SQI71649.1\|3094977_3096924_-	ABC transporter	G9BWD6	Planktothrix_phage	1.2e-39	41.9
SQI71650.1\|3096920_3098039_-	Macrolide-specific efflux protein MacA	A0A140XAI1	Dickeya_phage	1.1e-08	38.9
3099175:3099188	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3497618 : 3557920

Bacillus_phage(25.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI73013.1\|3497618_3498536_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
SQI73015.1\|3498532_3498985_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
SQI73017.1\|3498985_3499402_-	copper efflux regulator	NA	NA	NA	NA
SQI73018.1\|3499511_3502013_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	6.7e-112	37.0
SQI73020.1\|3502166_3503003_+	Secreted protein	NA	NA	NA	NA
SQI73022.1\|3504075_3504555_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
SQI73024.1\|3504678_3506331_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
SQI73026.1\|3506503_3507724_+	fosmidomycin resistance protein	NA	NA	NA	NA
SQI73028.1\|3507938_3509615_+	transport protein	NA	NA	NA	NA
SQI73030.1\|3509663_3510968_-	inosine/guanosine kinase	NA	NA	NA	NA
SQI73033.1\|3511120_3512092_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	1.7e-15	27.9
SQI73035.1\|3512088_3513051_-	ferrochelatase	NA	NA	NA	NA
SQI73037.1\|3513252_3513897_-	adenylate kinase	NA	NA	NA	NA
SQI73039.1\|3514102_3515089_-	invertase	NA	NA	NA	NA
SQI73041.1\|3515340_3517215_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	3.4e-116	37.1
SQI73043.1\|3517325_3517931_-	recombination protein RecR	NA	NA	NA	NA
SQI73045.1\|3517930_3518260_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
SQI73047.1\|3520347_3520899_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.0e-28	45.2
SQI73049.1\|3521051_3521429_-	Inner membrane protein YbaN	NA	NA	NA	NA
SQI73051.1\|3521509_3522025_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
SQI73053.1\|3522038_3522206_+	Putative inner membrane protein	NA	NA	NA	NA
SQI73054.1\|3522275_3523199_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	2.8e-63	51.7
SQI73055.1\|3523240_3526603_-	integral membrane protein AefA	NA	NA	NA	NA
SQI73056.1\|3526721_3527375_-	potential acrAB operon repressor	NA	NA	NA	NA
SQI73057.1\|3527516_3528710_+	acriflavin resistance protein A	NA	NA	NA	NA
SQI73058.1\|3528732_3531882_+	acriflavin resistance protein B	NA	NA	NA	NA
SQI73059.1\|3532379_3532754_+	Hha toxicity attenuator	NA	NA	NA	NA
SQI73060.1\|3532781_3533000_+	hemolysin expression modulating protein	NA	NA	NA	NA
SQI73061.1\|3533178_3533730_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQI73062.1\|3533845_3534316_+	Putative inner membrane protein	NA	NA	NA	NA
SQI73063.1\|3534516_3534777_-	50S ribosomal protein L31	NA	NA	NA	NA
SQI73064.1\|3535001_3536552_+	Uncharacterized protein ylaB	NA	NA	NA	NA
SQI73066.1\|3536860_3537172_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
SQI73068.1\|3537204_3537774_-	lipoprotein	NA	NA	NA	NA
SQI73070.1\|3537988_3538849_+	acyl-CoA thioesterase II	NA	NA	NA	NA
SQI73072.1\|3538948_3540235_-	ammonium transporter	NA	NA	NA	NA
SQI73074.1\|3540266_3540605_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
SQI73075.1\|3540818_3542600_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	5.4e-39	26.7
SQI73077.1\|3542592_3544365_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	4.7e-51	29.8
SQI73079.1\|3544405_3544864_-	transcriptional regulator	NA	NA	NA	NA
SQI73081.1\|3544976_3546032_+	lyase	NA	NA	NA	NA
SQI73082.1\|3546081_3546900_-	HMP-PP phosphatase	NA	NA	NA	NA
SQI73084.1\|3547000_3548701_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQI73086.1\|3548765_3549461_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.7e-87	68.0
SQI73091.1\|3549566_3549965_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
SQI73094.1\|3550068_3550443_-	competence protein ComEA	NA	NA	NA	NA
SQI73109.1\|3550592_3552464_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
SQI73113.1\|3552752_3553025_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.9e-20	58.4
SQI73119.1\|3553233_3555588_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	7.2e-225	52.5
SQI73149.1\|3555773_3557045_-\|protease	ATP-dependent clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.5e-131	56.5
SQI73154.1\|3557296_3557920_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9

DBSCAN-SWA_9

3811284 : 3877756

uncultured_Mediterranean_phage(10.0%)

protease,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI73799.1\|3811284_3812712_-\|protease	serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	4.2e-26	29.2
SQI73800.1\|3812841_3814359_-	Deoxyguanosinetriphosphate triphospho hydrolase subgroup 1	NA	NA	NA	NA
SQI73801.1\|3814443_3815142_+	MTA/SAH nucleosidase	NA	NA	NA	NA
SQI73802.1\|3815134_3815935_+	cobalamin periplasmic binding protein	NA	NA	NA	NA
SQI73803.1\|3815971_3816589_+	inner membrane protein YadS	NA	NA	NA	NA
SQI73804.1\|3816711_3817056_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	1.0e-26	50.5
SQI73805.1\|3817137_3818559_-	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA
SQI73806.1\|3818728_3820009_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
SQI73807.1\|3820066_3822049_-	iron-hydroxamate transporter permease subunit	NA	NA	NA	NA
SQI73808.1\|3822045_3822936_-	ferrichrome-binding periplasmic protein	NA	NA	NA	NA
SQI73809.1\|3822935_3823835_-	ferrichrome transport ATP-binding protein FhuC	G9BWD6	Planktothrix_phage	2.3e-14	27.8
SQI73810.1\|3823780_3825994_-	ferrichrome outer membrane transporter	NA	NA	NA	NA
SQI73811.1\|3826286_3828806_-	penicillin-binding protein 1b	NA	NA	NA	NA
SQI73812.1\|3828945_3831420_-	ATP-dependent helicase HrpB	A0A2H4UU36	Bodo_saltans_virus	1.9e-34	28.6
SQI73813.1\|3831447_3831978_+	2'-5' RNA ligase	NA	NA	NA	NA
SQI73814.1\|3831994_3832699_+	Sugar fermentation stimulation protein	NA	NA	NA	NA
SQI73815.1\|3832875_3833331_+	dnaK suppressor protein	NA	NA	NA	NA
SQI73816.1\|3833354_3834296_+\|tRNA	glutamyl-Q tRNA(Asp) synthetase	NA	NA	NA	NA
SQI73817.1\|3834436_3835855_+	poly(A) polymerase	H7BUW3	unidentified_phage	4.2e-26	37.4
SQI73818.1\|3835851_3836331_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase	NA	NA	NA	NA
SQI73819.1\|3836750_3837347_+	fimbrial protein StaA	NA	NA	NA	NA
SQI73820.1\|3837485_3838223_+	chaperone protein EcpD	NA	NA	NA	NA
SQI73821.1\|3838254_3840888_+	putative outer membrane usher protein	NA	NA	NA	NA
SQI73822.1\|3840874_3841441_+	fimbrial protein StaD	NA	NA	NA	NA
SQI73823.1\|3841455_3842070_+	putative fimbrial protein	NA	NA	NA	NA
SQI73824.1\|3842082_3842664_+	fimbrial protein StaF	NA	NA	NA	NA
SQI73825.1\|3842749_3843862_+	putative fimbrial-like adhesin protein	NA	NA	NA	NA
SQI73826.1\|3843979_3844774_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
SQI73827.1\|3844785_3845640_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
SQI73828.1\|3845734_3846115_+	aspartate 1-decarboxylase	NA	NA	NA	NA
SQI73829.1\|3846120_3847350_-	polysaccharide deacetylase domain protein	NA	NA	NA	NA
SQI73830.1\|3847411_3847852_-	PTS system IIA component	NA	NA	NA	NA
SQI73831.1\|3847956_3848727_-	ABC transporter	NA	NA	NA	NA
SQI73832.1\|3848723_3849650_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.5e-21	33.2
SQI73833.1\|3849758_3850421_+	carbonic anhydrase	NA	NA	NA	NA
SQI73834.1\|3850478_3851015_-	Hypoxanthine-guanine phosphoribosyl transferase	A0A218MMB5	uncultured_virus	7.8e-18	33.1
SQI73835.1\|3851220_3853611_+	glucose dehydrogenase	NA	NA	NA	NA
SQI73836.1\|3853688_3855284_-	Blue copper oxidase CueO	A0A0C6DWA2	Mamastrovirus	2.9e-20	59.8
SQI73837.1\|3855446_3855833_+	lipoprotein, PulS/OutS family	NA	NA	NA	NA
SQI73838.1\|3855939_3856800_+	spermidine synthase	NA	NA	NA	NA
SQI73839.1\|3856820_3857615_+	S-adenosylmethionine decarboxylase proenzyme	NA	NA	NA	NA
SQI73840.1\|3857644_3858412_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	2.8e-29	35.7
SQI73841.1\|3858421_3859405_-	4-hydroxythreonine-4-phosphate dehydrogenase	NA	NA	NA	NA
SQI73842.1\|3859394_3860666_-	membrane protein	NA	NA	NA	NA
SQI73843.1\|3860662_3861616_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA
SQI73844.1\|3861850_3862213_-	protein YacL	NA	NA	NA	NA
SQI73845.1\|3862401_3864999_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
SQI73846.1\|3865389_3866988_+	membrane protein	NA	NA	NA	NA
SQI73847.1\|3867000_3867792_+	probable secreted protein	NA	NA	NA	NA
SQI73848.1\|3867829_3868114_-	putative secreted protein	NA	NA	NA	NA
SQI73849.1\|3868450_3869875_-	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-41	27.1
SQI73850.1\|3870076_3871966_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
SQI73851.1\|3871980_3874644_-	pyruvate dehydrogenase E1 component	NA	NA	NA	NA
SQI73852.1\|3874803_3875568_-	pyruvate dehydrogenase complex repressor	NA	NA	NA	NA
SQI73853.1\|3876019_3876310_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQI73854.1\|3876379_3876670_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQI73855.1\|3876739_3877036_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQI73856.1\|3877105_3877396_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQI73857.1\|3877465_3877756_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_10

4485385 : 4528174

Burkholderia_phage(42.11%)

tRNA,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQI75638.1\|4485385_4486384_-\|tRNA	tRNA dihydrouridine synthase A	NA	NA	NA	NA
SQI75640.1\|4486471_4487782_-	conjugative transfer protein	NA	NA	NA	NA
SQI75641.1\|4488028_4488544_+	zinc uptake regulation protein	NA	NA	NA	NA
SQI75643.1\|4488642_4488855_-	stress-response protein	NA	NA	NA	NA
SQI75645.1\|4488873_4489002_-	putative cytoplasmic protein	NA	NA	NA	NA
SQI75647.1\|4488983_4490309_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA
SQI75648.1\|4490487_4491096_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
SQI75650.1\|4491204_4491573_-	diacylglycerol kinase	NA	NA	NA	NA
SQI75652.1\|4491743_4494164_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQI75654.1\|4494274_4495147_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
SQI75656.1\|4495160_4495658_-	chorismate lyase	NA	NA	NA	NA
SQI75658.1\|4495838_4496756_-	maltose operon periplasmic protein	NA	NA	NA	NA
SQI75660.1\|4496919_4498278_-	maltoporin	NA	NA	NA	NA
SQI75662.1\|4498365_4499475_-	maltose/maltodextrin transport ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
SQI75664.1\|4499836_4501027_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
SQI75666.1\|4501213_4502758_+	maltose transport inner membrane protein	NA	NA	NA	NA
SQI75668.1\|4502772_4503663_+	maltose transport inner membrane protein	NA	NA	NA	NA
SQI75670.1\|4504006_4505482_+	D-xylose transporter XylE	NA	NA	NA	NA
SQI75672.1\|4505527_4505938_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
SQI75673.1\|4506079_4508176_-	lipoprotein	NA	NA	NA	NA
SQI75675.1\|4508175_4508913_-	putative lipoprotein	NA	NA	NA	NA
SQI75677.1\|4508909_4509548_-	outer membrane lipoprotein	NA	NA	NA	NA
SQI75680.1\|4509611_4509857_-	YjbE secreted protein	NA	NA	NA	NA
SQI75684.1\|4510297_4511947_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA
SQI75686.1\|4512335_4513685_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA
SQI75687.1\|4513819_4514167_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
SQI75688.1\|4514741_4515029_+	membrane protein	Q6QIC8	Burkholderia_phage	1.2e-17	50.0
SQI75689.1\|4515064_4515637_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	1.8e-57	57.8
SQI75690.1\|4515649_4515964_+	membrane protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
SQI75691.1\|4516123_4516579_+	putative cytoplasmic protein	NA	NA	NA	NA
SQI75692.1\|4516575_4516773_+	gp12	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
SQI75693.1\|4516762_4518178_+\|tail	tail protein	A4JWK5	Burkholderia_virus	6.3e-184	69.3
SQI75694.1\|4518177_4518702_+\|tail	tail protein	Q6QIA9	Burkholderia_phage	4.0e-67	69.0
SQI75695.1\|4518753_4519071_+	Uncharacterised protein	NA	NA	NA	NA
SQI75697.1\|4519252_4521538_+\|tail	tail protein	A4JWL0	Burkholderia_virus	1.4e-68	28.8
SQI75699.1\|4521537_4522491_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	4.2e-38	53.1
SQI75701.1\|4522490_4522700_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
SQI75702.1\|4522687_4523728_+	gp21	A4JWL3	Burkholderia_virus	3.0e-74	45.9
SQI75704.1\|4523737_4524460_+\|plate	baseplate protein	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
SQI75706.1\|4524557_4524917_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.4e-34	64.2
SQI75713.1\|4524907_4526023_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	2.2e-99	51.4
SQI75715.1\|4526015_4526648_+\|tail	tail fiber protein	Q6QI98	Burkholderia_phage	2.8e-22	54.9
SQI75718.1\|4526650_4527796_+\|tail	tail fiber domain-containing protein	A0A0M3ULF6	Salmonella_phage	3.6e-52	52.5
SQI75723.1\|4527808_4528174_+\|tail	tail assembly chaperone gp38	A0A0U2QV64	Escherichia_phage	1.2e-22	42.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483477

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection