CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483495	Salmonella enterica strain NCTC9948 genome assembly, chromosome: 1	4 crisprs	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	0	13	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483495_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483495_2

958425-958857

TypeI-E

I-E

Consensus_repeat	Method
GTGTGTTCCCCGCGTTAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGTTAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGTTAGCGGGGATAAACCG	CRT

6 spacers

cas3

The CRISPR arrays of LS483495_2

>merge|LS483495|2|958425-958857|PILER-CR,CRISPRCasFinder,CRT
GTGTGTTCCCCGCGTTAGCGGGGATAAACCGGGCAACCATATCGAGCTAGAGGGGGTACAGGTGTGTTCCCCGCGTTAGCGGGGATAAACCGCAGGAGGGAGAGCACCGTTCCCGTGTATTCGAGTGTTCCCCGCGTTAGCGGGGATAAACCGACACGTTCGAAAATCTGCGCGCCCAGGGCTGGGTGTTCCCCGCGTTAGCGGGGATAAACCGCCGCATTACACGTATTTAATTTACTGCATGAGGTGTTCCCCGCGTTAGCGGGGATAAACCGTGTCCTTGTTCCCCACTTAACGTGGGGATAAACCGCTGCTCGCAGTTATTGGCGTAATAGGCCGGGCGTGTTCCCCGCGCTAGCGGGGATAAACCGCGGGCTGATGCCCGCTATTTGTTTATTAATGACGTGTTCCACGCGCCAGCGGGGATAGCCGT

>LS483495|2|1|958425-958638|PILER-CR
GTGTGTTCCCCGCGTTAGCGGGGATAAACCG	GGCAACCATATCGAGCTAGAGGGGGTACAG
GTGTGTTCCCCGCGTTAGCGGGGATAAACCG	CAGGAGGGAGAGCACCGTTCCCGTGTATTC
GAGTGTTCCCCGCGTTAGCGGGGATAAACCG	ACACGTTCGAAAATCTGCGCGCCCAGGGCT
GGGTGTTCCCCGCGTTAGCGGGGATAAACCG

>LS483495|2|2|958427-958857|CRISPRCasFinder
GTGTTCCCCGCGTTAGCGGGGATAAACCG	GGCAACCATATCGAGCTAGAGGGGGTACAGGT
GTGTTCCCCGCGTTAGCGGGGATAAACCG	CAGGAGGGAGAGCACCGTTCCCGTGTATTCGA
GTGTTCCCCGCGTTAGCGGGGATAAACCG	ACACGTTCGAAAATCTGCGCGCCCAGGGCTGG
GTGTTCCCCGCGTTAGCGGGGATAAACCG	CCGCATTACACGTATTTAATTTACTGCATGAG
GTGTTCCCCGCGTTAGCGGGGATAAACCG	TGTCCTTGTTCCCCACTTAACGTGGGGATAAACCGCTGCTCGCAGTTATTGGCGTAATAGGCCGGGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGGGCTGATGCCCGCTATTTGTTTATTAATGAC
GTGTTCCACGCGCCAGCGGGGATAGCCGT

>LS483495|2|1|958427-958699|CRT
GTGTTCCCCGCGTTAGCGGGGATAAACCG	GGCAACCATATCGAGCTAGAGGGGGTACAGGT
GTGTTCCCCGCGTTAGCGGGGATAAACCG	CAGGAGGGAGAGCACCGTTCCCGTGTATTCGA
GTGTTCCCCGCGTTAGCGGGGATAAACCG	ACACGTTCGAAAATCTGCGCGCCCAGGGCTGG
GTGTTCCCCGCGTTAGCGGGGATAAACCG	CCGCATTACACGTATTTAATTTACTGCATGAG
GTGTTCCCCGCGTTAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
LS483495.1\|SQJ38249.1\|964156_964891_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483495.1\|SQJ38247.1\|962428_964141_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LS483495.1\|SQJ38234.1\|959983_960202_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LS483495.1\|SQJ38226.1\|946814_949571_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	unknown	unknown	gnl\|CDD\|236848
LS483495.1\|SQJ38252.1\|964978_965932_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LS483495.1\|SQJ38278.1\|968021_968369_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483495.1\|SQJ38228.1\|950975_953210_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LS483495.1\|SQJ38281.1\|968365_969034_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483495.1\|SQJ38225.1\|946145_946742_+\|Glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
LS483495.1\|SQJ38231.1\|956023_957322_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483495.1\|SQJ38246.1\|960629_962429_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LS483495.1\|SQJ38227.1\|949628_950924_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	gnl\|CDD\|237291
LS483495.1\|SQJ38274.1\|966373_967606_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483495.1\|SQJ38232.1\|957458_958130_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LS483495.1\|SQJ38233.1\|959040_959751_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LS483495.1\|SQJ38224.1\|945601_946078_+\|Glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
LS483495.1\|SQJ38229.1\|953284_954076_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LS483495.1\|SQJ38230.1\|954303_955941_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LS483495.1\|SQJ38223.1\|944183_945524_+\|glucarate-dehydratase-1	unknown	unknown	gnl\|CDD\|211799
LS483495.1\|SQJ38276.1\|967623_967899_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
LS483495.1\|SQJ38249.1\|964156_964891_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.64861e-136
LS483495.1\|SQJ38247.1\|962428_964141_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483495.1\|SQJ38234.1\|959983_960202_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	4.88091e-26
LS483495.1\|SQJ38226.1\|946814_949571_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
LS483495.1\|SQJ38252.1\|964978_965932_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LS483495.1\|SQJ38278.1\|968021_968369_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.47056e-34
LS483495.1\|SQJ38228.1\|950975_953210_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LS483495.1\|SQJ38281.1\|968365_969034_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.15823e-32
LS483495.1\|SQJ38225.1\|946145_946742_+\|Glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	4.89632e-102
LS483495.1\|SQJ38231.1\|956023_957322_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483495.1\|SQJ38246.1\|960629_962429_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LS483495.1\|SQJ38227.1\|949628_950924_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LS483495.1\|SQJ38274.1\|966373_967606_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.20873e-61
LS483495.1\|SQJ38232.1\|957458_958130_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
LS483495.1\|SQJ38233.1\|959040_959751_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.53745e-88
LS483495.1\|SQJ38224.1\|945601_946078_+\|Glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	5.02383e-84
LS483495.1\|SQJ38229.1\|953284_954076_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.02644e-157
LS483495.1\|SQJ38230.1\|954303_955941_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LS483495.1\|SQJ38223.1\|944183_945524_+\|glucarate-dehydratase-1	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
LS483495.1\|SQJ38276.1\|967623_967899_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.15717e-21

>LS483495.1|SQJ38232.1|957458_958130_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483495.1|SQJ38231.1|956023_957322_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LS483495.1|SQJ38230.1|954303_955941_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>LS483495.1|SQJ38229.1|953284_954076_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MNQIDRLLNIMQRLRDPEGGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELCADNSEEVLARWEQIKTEERAQKAQHSALDDIPRNFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LS483495.1|SQJ38228.1|950975_953210_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGHLRAEMKNEGVMAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGN
>LS483495.1|SQJ38227.1|949628_950924_+|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MAQFYSAKRRVTTCQIITVKVNDLDPFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLTSLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQSWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>LS483495.1|SQJ38226.1|946814_949571_-|BarA-sensory-histidine-kinase-(VarS-/-GacS)
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESVIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHAEPLLMDASKIAMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGIHEEELEPEFLELLDEMDNVAREAKKILG
>LS483495.1|SQJ38225.1|946145_946742_+|Glycerate-kinase
MSACRIDVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALIRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEERLADADLVITGEGRIDSQTIHGKVPIGVANIAKRHNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALENAAENVRMTARNVAATLKTGSLLR
>LS483495.1|SQJ38224.1|945601_946078_+|Glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVDVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGWCRRWGQATGCAGQ
>LS483495.1|SQJ38223.1|944183_945524_+|glucarate-dehydratase-1
MSAQFTTPVVTSMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDEQCDWYRLRHEEAMTPETVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAKRFPNARVTLDPNGAWSLNEAINIGRYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPTKPGLGVELDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR
>LS483495.1|SQJ38233.1|959040_959751_+|beta-lactamase
MVQDESTSILFDTGPDGSFMQNALAMGSDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRRIKKLSREVDYSRYRMVYTRDPLPIGENFIWSGEIPVVVPETYGIVGGHDAEPDSILDEGVLIYQSVKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPLTLWRVRRFLQEQKTEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>LS483495.1|SQJ38234.1|959983_960202_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFNLLMIVLITTI
>LS483495.1|SQJ38246.1|960629_962429_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMTGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVVVTSTQGEGEPPEEAAALHKFLFSKKAPTLNDTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAVNEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEALQWHCELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPSQLDADALVGLLRPLTPRLYSIASSQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRIEEDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAEDAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LS483495.1|SQJ38247.1|962428_964141_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWFDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIVASVPESQKAKIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEAVMTKHGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LS483495.1|SQJ38249.1|964156_964891_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNVLNDLPKVDRILALAEANAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLINQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWDHGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483495.1|SQJ38252.1|964978_965932_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHHNYTLNESRLAHLLSADKEKAIHMGKWDKVQDHFRAEKKDHALDVLYAIIHGQGRGEPGEMEVNVEDMGKIYAFKRLQHLACPAHQDLFNIKMDASQTQFLFMVGDTVISQSKIQDILNISDNAMVASMSREERQLFLRICEMIGATMTWHPELLQGSVSTLRKEVTSNVQIKAAVYEMMRPAEAPDHQFIEWQDTLTENEKSMLACINAGNFDAITQFCKIGYREVQGEVAFSMVHPCISYLLHTYSPFAEFKETNAGFLNKLNQDYNDYHTNKMFIDVILENIYLTHERSLHIGKNGCSRNILLA
>LS483495.1|SQJ38274.1|966373_967606_+|helicase
MSIYHYWGKTRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNAFNEPTRYYEKIAHTTLGYELWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEVWDEDEGIAQFQQFSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANAWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKRCWRRLA
>LS483495.1|SQJ38276.1|967623_967899_+|helicase
MMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPG
>LS483495.1|SQJ38278.1|968021_968369_+|helicase
MEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRPVDYSVIFVIVTVW
>LS483495.1|SQJ38281.1|968365_969034_+|helicase
MKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGAIRMPQSARLLIESVYGEDVDMPVGFAKTEQLQEGKFYCDRAFASQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFERLDGEPLRKWCAQQHQDNDFATVIVVTDFAACGYSANEGLIGMMGE

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Crispr_ID: LS483495_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483495_3

974900-976271

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGNCAGCGGGGATAAACCG	CRT

22 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LS483495_3

>merge|LS483495|3|974900-976271|CRISPRCasFinder,CRT
TGTGTTCCCGCGCCAGCGGGGATAAACCGGCTAAACACATTGACCCGGTGCTACAGGAAATGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCGGGCTATGAGCAACTAGCAAACGCCATGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTATGGGAGATACCACCTGATCTGGCCCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATACTAGTGATTTTATCCCCGTTTAAACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTCGGGGTTAATTGTAATTGACGTTGATTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATTTGAATGAATTGTCCAAACAATCTTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCGCGAACCGTACTCAACCTCAAAAAAATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAGAAACGCAGCGCGGCCTGACCTGGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCTCGCGCTGTGCCGTACTGAGACCGGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAGATTGCCGCGCAGCTCTGCCGAGCCGACGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGCCGGTTTGCAGGGTGGTAGTGAGAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTCAGGCCATCATATTCGCGTGGATTGATGAGTGTTCCCCGCGTCAGCGGGGATAAACCGACGATTCAGGACGTGCTAATTTCTGGGCTGGTGTGTTCCCCGCGTCAGCGGGGATAAACCGGGCGATAAGTGCAAAATTCGGAGATTAAAGAAGTGTTCCCCGCGTCAGCGGGGATAAACCGTTGTCTACCGTGGAGGAGTCACAGGGTGGTTCGTGTTCCCCGCGTCAGCGGGGATAAACCGCTACCCAACGCTAACGCGCCGATTACCGGGACGTGTTCCCCGCGTCAGCGGGGATAAACCGCTGAACGTAGATCCCGATGACGCAATGTCGGTGTGTTCCCCGCGTCAGCGGGGATAAACCGGTTCTTTGGCAGTCGTTCCAGACTATTTATCCGTGTTCCCCGCGTCAGCGGGGATAAACCGCCAACAATACGGCAGGAATGGCGGAGGCGTATCGTGTTCCCCGCGTCAGCGGGGATAAACCGGAGACGCTATTCCACGTGCCTAACGGCCTAAAGTGTTCCCCGCGTCAGCGGGGATAAACCGTTTGTACCCTACTTGTTTTGTTGAATGGTGGTGTGTTCCCCGCGTCAGCGGGGATAAACCGGCTCGTCGAGGTGATATCAAGGCGGCGTTTCGGTGTTCCCCACGTCAGCGGGGATAAACGC

>LS483495|3|3|974900-976271|CRISPRCasFinder
TGTGTTCCCGCGCCAGCGGGGATAAACCG	GCTAAACACATTGACCCGGTGCTACAGGAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGGGCTATGAGCAACTAGCAAACGCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTATGGGAGATACCACCTGATCTGGCCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATACTAGTGATTTTATCCCCGTTTAAACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTCGGGGTTAATTGTAATTGACGTTGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATTTGAATGAATTGTCCAAACAATCTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGCGAACCGTACTCAACCTCAAAAAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAGAAACGCAGCGCGGCCTGACCTGGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTCGCGCTGTGCCGTACTGAGACCGGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGATTGCCGCGCAGCTCTGCCGAGCCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCCGGTTTGCAGGGTGGTAGTGAGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTCAGGCCATCATATTCGCGTGGATTGATGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACGATTCAGGACGTGCTAATTTCTGGGCTGGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGATAAGTGCAAAATTCGGAGATTAAAGAA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGTCTACCGTGGAGGAGTCACAGGGTGGTTC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTACCCAACGCTAACGCGCCGATTACCGGGAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTGAACGTAGATCCCGATGACGCAATGTCGGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GTTCTTTGGCAGTCGTTCCAGACTATTTATCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CCAACAATACGGCAGGAATGGCGGAGGCGTATC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GAGACGCTATTCCACGTGCCTAACGGCCTAAA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTTGTACCCTACTTGTTTTGTTGAATGGTGGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCTCGTCGAGGTGATATCAAGGCGGCGTTTCG
GTGTTCCCCACGTCAGCGGGGATAAACGC

>LS483495|3|2|974900-976271|CRT
TGTGTTCCCGCGCCAGCGGGGATAAACCG	GCTAAACACATTGACCCGGTGCTACAGGAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGGGCTATGAGCAACTAGCAAACGCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTATGGGAGATACCACCTGATCTGGCCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATACTAGTGATTTTATCCCCGTTTAAACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTCGGGGTTAATTGTAATTGACGTTGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATTTGAATGAATTGTCCAAACAATCTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGCGAACCGTACTCAACCTCAAAAAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAGAAACGCAGCGCGGCCTGACCTGGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTCGCGCTGTGCCGTACTGAGACCGGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGATTGCCGCGCAGCTCTGCCGAGCCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCCGGTTTGCAGGGTGGTAGTGAGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTCAGGCCATCATATTCGCGTGGATTGATGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACGATTCAGGACGTGCTAATTTCTGGGCTGGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGATAAGTGCAAAATTCGGAGATTAAAGAA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGTCTACCGTGGAGGAGTCACAGGGTGGTTC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTACCCAACGCTAACGCGCCGATTACCGGGAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTGAACGTAGATCCCGATGACGCAATGTCGGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GTTCTTTGGCAGTCGTTCCAGACTATTTATCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CCAACAATACGGCAGGAATGGCGGAGGCGTATC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GAGACGCTATTCCACGTGCCTAACGGCCTAAA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTTGTACCCTACTTGTTTTGTTGAATGGTGGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCTCGTCGAGGTGATATCAAGGCGGCGTTTCG
GTGTTCCCCACGTCAGCGGGGATAAACGC

Protein	Signature genes	Signature genes Name	Protein_function
LS483495.1\|SQJ38289.1\|971146_972205_+\|CRISPR-associated-protein-Cse4	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
LS483495.1\|SQJ38297.1\|974510_974795_+\|ssRNA-endonuclease	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
LS483495.1\|SQJ38314.1\|978501_979941_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LS483495.1\|SQJ38283.1\|969045_970155_+\|CRISPR-associated-protein-CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LS483495.1\|SQJ38363.1\|982613_983663_+\|tRNA-pseudouridine-13-synthase	unknown	unknown	gnl\|CDD\|234884
LS483495.1\|SQJ38319.1\|982137_982617_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LS483495.1\|SQJ38313.1\|977583_978492_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LS483495.1\|SQJ38318.1\|981427_982138_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LS483495.1\|SQJ38317.1\|981097_981409_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LS483495.1\|SQJ38315.1\|979927_980533_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LS483495.1\|SQJ38287.1\|970596_971133_+\|CRISPR-associated-protein-Cse2-family	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
LS483495.1\|SQJ38291.1\|972215_972962_+\|CRISPR-associated-protein-Cas5e-family	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
LS483495.1\|SQJ38364.1\|983643_984405_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LS483495.1\|SQJ38281.1\|968365_969034_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483495.1\|SQJ38295.1\|973590_974511_+\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LS483495.1\|SQJ38285.1\|970124_970622_+\|crispr-associated-protein,-Cse1-family	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|187800
LS483495.1\|SQJ38278.1\|968021_968369_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483495.1\|SQJ38316.1\|980583_980907_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LS483495.1\|SQJ38293.1\|972943_973594_+\|CRISPR-associated-protein-Cse3-family	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
LS483495.1\|SQJ38300.1\|976285_977332_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299

Protein	Function_ID	Function_description	E-value
LS483495.1\|SQJ38289.1\|971146_972205_+\|CRISPR-associated-protein-Cse4	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	7.91055e-136
LS483495.1\|SQJ38297.1\|974510_974795_+\|ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.32382e-61
LS483495.1\|SQJ38314.1\|978501_979941_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483495.1\|SQJ38283.1\|969045_970155_+\|CRISPR-associated-protein-CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	4.05692e-130
LS483495.1\|SQJ38363.1\|982613_983663_+\|tRNA-pseudouridine-13-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LS483495.1\|SQJ38319.1\|982137_982617_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
LS483495.1\|SQJ38313.1\|977583_978492_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483495.1\|SQJ38318.1\|981427_982138_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.14142e-119
LS483495.1\|SQJ38317.1\|981097_981409_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	9.72909e-65
LS483495.1\|SQJ38315.1\|979927_980533_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.22548e-144
LS483495.1\|SQJ38287.1\|970596_971133_+\|CRISPR-associated-protein-Cse2-family	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.60324e-29
LS483495.1\|SQJ38291.1\|972215_972962_+\|CRISPR-associated-protein-Cas5e-family	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.41247e-48
LS483495.1\|SQJ38364.1\|983643_984405_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.90053e-147
LS483495.1\|SQJ38281.1\|968365_969034_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.15823e-32
LS483495.1\|SQJ38295.1\|973590_974511_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.00611e-156
LS483495.1\|SQJ38285.1\|970124_970622_+\|crispr-associated-protein,-Cse1-family	gnl\|CDD\|187800	cd09669, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	7.67561e-42
LS483495.1\|SQJ38278.1\|968021_968369_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.47056e-34
LS483495.1\|SQJ38316.1\|980583_980907_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.36723e-48
LS483495.1\|SQJ38293.1\|972943_973594_+\|CRISPR-associated-protein-Cse3-family	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	8.52735e-75
LS483495.1\|SQJ38300.1\|976285_977332_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0

>LS483495.1|SQJ38297.1|974510_974795_+|ssRNA-endonuclease
MSMVVVVTENVPPRLRGRLAIWLLEIRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPL
>LS483495.1|SQJ38295.1|973590_974511_+|CRISPR-associated-protein-Cas1
MTFVPLPPIPLKDRTSMIFLQYGQIDVLDGAFVLINKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDNDLRLKVVRKMYELRFREPPPARRSIEQLRGIEGSRVRATYALLAKQYGVKWNGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSTKLTGKLIPLIEDVLAAGEIERPQPAPDMLPPAIPEPESLGDSGHRGHG
>LS483495.1|SQJ38293.1|972943_973594_+|CRISPR-associated-protein-Cse3-family
MYLSRITLHTSELSPAKLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALEWLSRQGEQNGFSLRETSVDAYRQQQIRREKSRQMIQFSSVDYAGVLVVNNPALFLQRLAQGYGKSRAFGCGMMMIKPGDSE
>LS483495.1|SQJ38291.1|972215_972962_+|CRISPR-associated-protein-Cas5e-family
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELRDPELQSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRCYQDQFNTLKLTLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>LS483495.1|SQJ38289.1|971146_972205_+|CRISPR-associated-protein-Cse4
MTTFIQLHLLTAYPATNLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIDSGIDAKKAVEYVEKIANCFGKVKSDKKAKDPLTNAETEQLVHISPAEFEAVKALAHRLAVEKRPATEEEAALLRRDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAVLKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQQTDTASFDVMNQQGSMKDVLDFICA
>LS483495.1|SQJ38287.1|970596_971133_+|CRISPR-associated-protein-Cse2-family
MSIVKDDHKATLRQWHEELQEKRGARASLRRSVTVNDVCLSEGFRSLLMQTHTLWKIEGQEWRFTALALTTALAAHVKSIDERQKFAAQLNNVMSELRFSRLCAVKTPDELLRQLRRAVKLLNGAVNLISLAEDIFRWCKENDDLLNHHCRQQRPTEFIRIRWALEYYHAGEADNEQD
>LS483495.1|SQJ38285.1|970124_970622_+|crispr-associated-protein,-Cse1-family
MGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTAIRLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQKELWLFTRRYFDDRVFTNPYESSDLKRIMMARKKYFTTSAEKQARKPPKQKSRRLLNEYREGRS
>LS483495.1|SQJ38283.1|969045_970155_+|CRISPR-associated-protein-CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGVAWQFLLGVLQCSIAPKNSARWEDIWLDGLTEQMLREALAPLEHAFQFGPESPSFMQDFEPLTGEKVSIASLLPESPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPMTTLIELQAYQGERQTPLWRKLWLNVMPQDAADLPLPATYDASVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFSTTQPGTCDICGADSDGLLSVMTVKNYGVNYDGWRHPLTPYRLPVKEGSGFFSVKPQPGGLIWRDWLGLSQENHTEANKEYPALVVNLFNARRLRDVKAGLWALARISTI
>LS483495.1|SQJ38281.1|968365_969034_+|helicase
MKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGAIRMPQSARLLIESVYGEDVDMPVGFAKTEQLQEGKFYCDRAFASQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFERLDGEPLRKWCAQQHQDNDFATVIVVTDFAACGYSANEGLIGMMGE
>LS483495.1|SQJ38278.1|968021_968369_+|helicase
MEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRPVDYSVIFVIVTVW
>LS483495.1|SQJ38300.1|976285_977332_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFTVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGMSVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAKKTS
>LS483495.1|SQJ38313.1|977583_978492_+|Sulfate-adenylyltransferase-subunit-2-1
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEIIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LS483495.1|SQJ38314.1|978501_979941_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNIAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVREPVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LS483495.1|SQJ38315.1|979927_980533_+|adenosine-5-phosphosulfate-kinase
MAQHDENVVWHAHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVQERVGHERFIEIYVDTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>LS483495.1|SQJ38316.1|980583_980907_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LS483495.1|SQJ38317.1|981097_981409_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTNR
>LS483495.1|SQJ38318.1|981427_982138_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKTIIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>LS483495.1|SQJ38319.1|982137_982617_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>LS483495.1|SQJ38363.1|982613_983663_+|tRNA-pseudouridine-13-synthase
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFAPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQREALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>LS483495.1|SQJ38364.1|983643_984405_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLEQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: LS483495_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483495_4

2095814-2096513

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGAGAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRT

11 spacers

The CRISPR arrays of LS483495_4

>merge|LS483495|4|2095814-2096513|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCGGATTACGCCTGATATCCGCCATCATCCAGGAAGTGTTCCCCGCGAGAGCGGGGATAAACCGGGCAACCATATCGAGCTAGAGGGGGTACAGGTGTGTTCCCCGCGAGAGCGGGGATAAACCGGGTGAGTGCAAACGCAACACTCAGCCATGGCAGTGTTCCCCGCGAGAGCGGGGATAAACCGTCTGGATATTGGCTGTTGTGTCAACGCCCACGGTGTTCCCCGCGAGAGCGGGGATAAACCGCCTCGGTGATCATCTCCCGATATCCGGTATTGGTGTTCCCCGCGAGAGCGGGGATAAACCGGTTCTTTGGCAGTCGTTCCAGACTATTTATCCGTGTTCCCCGCGAGAGCGGGGATAAACCGCATCGTAACTGTCAGCTTCTCCCCAGTAATCAGTGTTCCCCGCGAGAGCGGGGATAAACCGAGGTCTGCAGGGAGTGCCCGGATAGAAACAGCGTGTTCCCCGCGAGAGCGGGGATAAACCGGCGGTCGGGCCGATTATGAACACAATCGCCGCGTGTTCCCCGCGAGAGCGGGGATAAACCGACCCGACCCGCGTACGCGTATTTGAGAATGACGTGTTCCCCGCGAGAGCGGGGATAAACCGGTCACGAGGTGATTCACTTGGTACTGGCTGATGTGTTCCCCGCGCGAGCGCTGAGTTTGTG

>LS483495|4|2|2095814-2096452|PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GATTACGCCTGATATCCGCCATCATCCAGGAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGCAACCATATCGAGCTAGAGGGGGTACAGGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGTGAGTGCAAACGCAACACTCAGCCATGGCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCTGGATATTGGCTGTTGTGTCAACGCCCACG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCTCGGTGATCATCTCCCGATATCCGGTATTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTCTTTGGCAGTCGTTCCAGACTATTTATCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CATCGTAACTGTCAGCTTCTCCCCAGTAATCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGGTCTGCAGGGAGTGCCCGGATAGAAACAGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGGTCGGGCCGATTATGAACACAATCGCCGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACCCGACCCGCGTACGCGTATTTGAGAATGAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG

>LS483495|4|4|2095814-2096513|CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GATTACGCCTGATATCCGCCATCATCCAGGAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGCAACCATATCGAGCTAGAGGGGGTACAGGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGTGAGTGCAAACGCAACACTCAGCCATGGCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCTGGATATTGGCTGTTGTGTCAACGCCCACG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCTCGGTGATCATCTCCCGATATCCGGTATTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTCTTTGGCAGTCGTTCCAGACTATTTATCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CATCGTAACTGTCAGCTTCTCCCCAGTAATCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGGTCTGCAGGGAGTGCCCGGATAGAAACAGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGGTCGGGCCGATTATGAACACAATCGCCGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACCCGACCCGCGTACGCGTATTTGAGAATGAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCACGAGGTGATTCACTTGGTACTGGCTGAT
GTGTTCCCCGCGCGAGCGCTGAGTTTGTG

>LS483495|4|3|2095814-2096513|CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GATTACGCCTGATATCCGCCATCATCCAGGAA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGCAACCATATCGAGCTAGAGGGGGTACAGGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGTGAGTGCAAACGCAACACTCAGCCATGGCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCTGGATATTGGCTGTTGTGTCAACGCCCACG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCTCGGTGATCATCTCCCGATATCCGGTATTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTTCTTTGGCAGTCGTTCCAGACTATTTATCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CATCGTAACTGTCAGCTTCTCCCCAGTAATCA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGGTCTGCAGGGAGTGCCCGGATAGAAACAGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCGGTCGGGCCGATTATGAACACAATCGCCGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ACCCGACCCGCGTACGCGTATTTGAGAATGAC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCACGAGGTGATTCACTTGGTACTGGCTGAT
GTGTTCCCCGCGCGAGCGCTGAGTTTGTG

Protein	Signature genes	Signature genes Name	Protein_function
LS483495.1\|SQJ41977.1\|2092485_2094021_+\|respiratory-nitrate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|224063
LS483495.1\|SQJ41979.1\|2094017_2094728_+\|respiratory-nitrate-reductase-1-subunit-delta	unknown	unknown	gnl\|CDD\|185014
LS483495.1\|SQJ41974.1\|2086961_2088359_+\|major-facilitator-superfamily-nitrite-extrusion-protein	unknown	unknown	gnl\|CDD\|184994
LS483495.1\|SQJ41972.1\|2084826_2086623_-\|Nitrate/nitrite-sensor-protein	unknown	unknown	gnl\|CDD\|182581
LS483495.1\|SQJ41998.1\|2103219_2103837_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
LS483495.1\|SQJ41996.1\|2102142_2102556_-\|DNA-binding-protein-h-ns	unknown	unknown	gnl\|CDD\|182858
LS483495.1\|SQJ41985.1\|2098321_2098780_-\|Protein-YchJ	unknown	unknown	gnl\|CDD\|234966
LS483495.1\|SQJ41999.1\|2104033_2106712_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
LS483495.1\|SQJ41987.1\|2098899_2099796_+\|phospholipase,-patatin-family	unknown	unknown	gnl\|CDD\|182352
LS483495.1\|SQJ41970.1\|2084183_2084834_-\|nitrate/nitrite-response-regulator-protein-NarL	unknown	unknown	gnl\|CDD\|182619
LS483495.1\|SQJ41991.1\|2100445_2100901_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|182652
LS483495.1\|SQJ41964.1\|2081512_2082202_+\|cation-transport-protein	unknown	unknown	gnl\|CDD\|226226
LS483495.1\|SQJ41989.1\|2099886_2100471_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|182652
LS483495.1\|SQJ41995.1\|2101564_2102011_+\|glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|184021
LS483495.1\|SQJ41976.1\|2088745_2092489_+\|respiratory-nitrate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|162434
LS483495.1\|SQJ41983.1\|2097428_2098271_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
LS483495.1\|SQJ41968.1\|2082800_2084183_+\|invasin	unknown	unknown	gnl\|CDD\|236661
LS483495.1\|SQJ41993.1\|2101103_2101568_+\|glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|184021
LS483495.1\|SQJ41966.1\|2082228_2082582_-\|Putative-ACR-protein	unknown	unknown	gnl\|CDD\|224470
LS483495.1\|SQJ41981.1\|2094727_2095405_+\|respiratory-nitrate-reductase-1-subunit-gamma	unknown	unknown	gnl\|CDD\|273030

Protein	Function_ID	Function_description	E-value
LS483495.1\|SQJ41977.1\|2092485_2094021_+\|respiratory-nitrate-reductase-1-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
LS483495.1\|SQJ41979.1\|2094017_2094728_+\|respiratory-nitrate-reductase-1-subunit-delta	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	5.87378e-88
LS483495.1\|SQJ41974.1\|2086961_2088359_+\|major-facilitator-superfamily-nitrite-extrusion-protein	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
LS483495.1\|SQJ41972.1\|2084826_2086623_-\|Nitrate/nitrite-sensor-protein	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
LS483495.1\|SQJ41998.1\|2103219_2103837_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.50577e-115
LS483495.1\|SQJ41996.1\|2102142_2102556_-\|DNA-binding-protein-h-ns	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	4.918e-77
LS483495.1\|SQJ41985.1\|2098321_2098780_-\|Protein-YchJ	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	1.35103e-106
LS483495.1\|SQJ41999.1\|2104033_2106712_-\|alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
LS483495.1\|SQJ41987.1\|2098899_2099796_+\|phospholipase,-patatin-family	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
LS483495.1\|SQJ41970.1\|2084183_2084834_-\|nitrate/nitrite-response-regulator-protein-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.27802e-141
LS483495.1\|SQJ41991.1\|2100445_2100901_+\|regulatory-protein	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	6.77631e-104
LS483495.1\|SQJ41964.1\|2081512_2082202_+\|cation-transport-protein	gnl\|CDD\|226226	COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism].	6.75286e-77
LS483495.1\|SQJ41989.1\|2099886_2100471_+\|regulatory-protein	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	5.73507e-101
LS483495.1\|SQJ41995.1\|2101564_2102011_+\|glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	1.07229e-100
LS483495.1\|SQJ41976.1\|2088745_2092489_+\|respiratory-nitrate-reductase-1-subunit-alpha	gnl\|CDD\|162434	TIGR01580, Respiratory_nitrate_reductase_1_alpha_chain, respiratory nitrate reductase, alpha subunit. The Nitrate reductase enzyme complex allows bacteria to use nitrate as an electron acceptor during anaerobic growth. The enzyme complex consists of a tetramer that has an alpha, beta and 2 gamma subunits. The alpha and beta subunits have catalytic activity and the gamma subunits attach the enzyme to the membrane and is a b-type cytochrome that receives electrons from the quinone pool and transfers them to the beta subunit. This model is specific for the alpha subunit for nitrate reductase I (narG) and nitrate reductase II (narZ) for gram positive and gram negative bacteria.A few thermophiles and archaea also match the model The seed members used to make the model include Nitrate reductases from Pseudomonas fluorescens (GP:11344601), E.coli (SP:P09152) and B.subtilis (SP:P42175). All seed members are experimentally characterized. Some unpublished nitrate reductases, that are shorter sequences, and probably fragments fall in between the noise and trusted cutoffs. Pfam models pfam00384 (Molybdopterin oxidoreductase) and pfam01568(Molydopterin dinucleotide binding domain) will also match the nitrate reductase, alpha subunit. [Energy metabolism, Anaerobic].	0
LS483495.1\|SQJ41983.1\|2097428_2098271_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	9.83293e-177
LS483495.1\|SQJ41968.1\|2082800_2084183_+\|invasin	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
LS483495.1\|SQJ41993.1\|2101103_2101568_+\|glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	2.0493e-82
LS483495.1\|SQJ41966.1\|2082228_2082582_-\|Putative-ACR-protein	gnl\|CDD\|224470	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism].	3.7796e-50
LS483495.1\|SQJ41981.1\|2094727_2095405_+\|respiratory-nitrate-reductase-1-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	7.98868e-133

>LS483495.1|SQJ41981.1|2094727_2095405_+|respiratory-nitrate-reductase-1-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPVDVKQKMAMIAGGACGVLTLVGGILLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASEHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQLVRARH
>LS483495.1|SQJ41979.1|2094017_2094728_+|respiratory-nitrate-reductase-1-subunit-delta
MIELVIVSRLLEYPDAALWQHQQELFDALASSEHLDKEDVRTLVVFLRDLTAQEILDAQASYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHGLQLDSRELPDHLPLYLEYLAQLPKNEALGGLQDIAPILALLSARLQQRESRYAVLFDLLLKLANTTIDKGKVAEKIADEVRDDTPQALDAVWEEEQVKFFADRGCNESEIAAHQRRFAGAVAPQYLNITTGGQH
>LS483495.1|SQJ41977.1|2092485_2094021_+|respiratory-nitrate-reductase-1-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRALLLGKIFANPHLPGIDDYYEPFDYDYQNLHTAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFENMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPAVVEQALKDGVPQSVIDAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVDSLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGKVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHRELARDAFPEKSGCGFTFGDGCHGSDTKFNLFNSRRIDAVDVTSKTEPHA
>LS483495.1|SQJ41976.1|2088745_2092489_+|respiratory-nitrate-reductase-1-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVGSLGQENNPEWKTVAISSNGEMVAPNGSIGFRWGEKGKWNLEQRDGTTGAETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDNVLLHKLPAKRLQLADGSSALVTTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWAEQITGVPRAQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGTNPLYIAREAEKAGMTPVDYTVKSLKDGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTEHGIQGLDLGKQGGVKPEEVEWVDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWDIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMTVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYIKADGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGRKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSETDAKDLGIEDNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>LS483495.1|SQJ41974.1|2086961_2088359_+|major-facilitator-superfamily-nitrite-extrusion-protein
MSHSSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGRRWTAFSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSQGVEQPDGSQLYLANAAWIWVPFLAIFTLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTLPTGGVGGSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSEERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKNKK
>LS483495.1|SQJ41972.1|2084826_2086623_-|Nitrate/nitrite-sensor-protein
MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNAHVVAEDVSRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQPWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEFTCQSDISCDDKGCHLCPRSALPMINGGTTLKWRLTDSHTQYGILLATLPYGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDNGCGVPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTFIPETNFTETQGDTHE
>LS483495.1|SQJ41970.1|2084183_2084834_-|nitrate/nitrite-response-regulator-protein-NarL
MNNQEPATILLIDDHPMLRTGVKQLVSMAPDISVVGEASNGEQGIDLAESLDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATTDRDVTQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>LS483495.1|SQJ41968.1|2082800_2084183_+|invasin
MSRIVFRSFSLSLLLLAASGTICAQAQDSFDQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDVNVDNEGHFNGSRGSWLIPLQDKQRYLTWSQLGLTQQTDGLVSNVGVGQRWAQDGWLLGYNTFYDNLLDENLQRAGVGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQQFLEQ
>LS483495.1|SQJ41966.1|2082228_2082582_-|Putative-ACR-protein
MQNIVIIANGAAYGSESLFNSLRLAIALREQESHLDLRLFLMSDAVTAGLRGQKPAEGYNIQQMLEILTAQNVPVKLCKTCADGRGITPLPLIDGVEIGTLVELAQWTLAADKVLTF
>LS483495.1|SQJ41964.1|2081512_2082202_+|cation-transport-protein
MLTRDFLVNADCKTAFGAIEESLLWSAEQRAVSLAATLACRPNDGAVWIFGYGSLMWNPALVYEESCTGTLEGWHRAFCLRLTAGRGTACQPGRMLALKEGGRTTGVAYRLPESTLEEELTLLWKREMITGCYLPTWCSLTLDNGRMVNALVFIMDPRHPLYESDTHALTIAPLIAAASGPLGTNAQYLFLLDQELRKLGMHDTCLDDLVASVKALLGVKEEQAIANLS
>LS483495.1|SQJ41983.1|2097428_2098271_-|formyltetrahydrofolate-deformylase
MQSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHETLRSLVERFEIPFELVSHEGLTREEHDRKMADAIDAHQPDYVVLAKYMRVLTPGFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>LS483495.1|SQJ41985.1|2098321_2098780_-|Protein-YchJ
MSQPCPCGSADEYSLCCGRIVSGERVAPDPSHLMRSRYCAFVMKDADYLIKSWHPTCNAAAFRDDIIAGFANTRWLGLTIFEHTWSEAENTGYVSFIARFSEQGKTGAIIERSRFIKENGQWYYIDGTRPQLGRNDPCPCGSGKKFKKCCGQ
>LS483495.1|SQJ41987.1|2098899_2099796_+|phospholipase,-patatin-family
MKIGLALGSGAARGWSHIGVIKALKQTGIDIDIVAGCSIGSLVGAAYACNKLSALEQWVCSFRYWDVLRLMDVSWGRGGLLRGERVFNHYRDIMPVTDFDHCSRRFGAVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVEHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLLSVNVGNINEESDDSLPWHKRLKERFSSLTSRRGVSSPGAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRAHAAIAAGQLAVEKKMDELIPLVRTDV
>LS483495.1|SQJ41989.1|2099886_2100471_+|regulatory-protein
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQPPVQQVISHCRINYRQLVSRRSAWTGAGYCAAI
>LS483495.1|SQJ41991.1|2100445_2100901_+|regulatory-protein
MLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPELGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVPLGTLGNAYLNQLSQRCDSWQCQIWGAGGRLRLMLSAE
>LS483495.1|SQJ41993.1|2101103_2101568_+|glucose-1-phosphate-uridylyltransferase
MAALNSKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGWQKAWVMPYCARIPLSETNLSLLFCQTLFLTNMSPTCLRITWLK
>LS483495.1|SQJ41995.1|2101564_2102011_+|glucose-1-phosphate-uridylyltransferase
MIRRFDETGNSQIMVEPVEDVTAYGVVNCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWALLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNSLGAEFKAWLEEEMGIKK
>LS483495.1|SQJ41996.1|2102142_2102556_-|DNA-binding-protein-h-ns
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEEQGKQLEDFLIKE
>LS483495.1|SQJ41998.1|2103219_2103837_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNTSLFEEIRAESARQTIHCVLVDESQFLTRQQVYQLSEVVDKLDIPVLCYGLRTDFRGELFVGSQYLLSWSDKLVELKTICFCGRKASMVLRLDQDGRPYNEGEQVVIGGNERYVSVCRKHYKDALEEGSLTAIQERHRHI
>LS483495.1|SQJ41999.1|2104033_2106712_-|alcohol-dehydrogenase
MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIIEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRARFASHGGYMLQGQELKAVQNVILKNGALNAAIVGQPAYKIAELAGFSVPETTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEEAVEKAERLVAMGGIGHTSCLYTDQDNQQDRVNYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSVVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGRDFTEGEVAAKKDVVAAPKAEKKAKKSA

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Crispr_ID: LS483495_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483495_5

2962802-2962891

Orphan

Consensus_repeat	Method
ATAAGCTATTGTTTTAACTACTAAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483495_5

>merge|LS483495|5|2962802-2962891|CRISPRCasFinder
ATAAGCTATTGTTTTAACTACTAAATCGAACTAAATCGAACTAAATCGAAAGCTATACATGCTATAACCTATTGTTTTAACTACTAAATC

>LS483495|5|5|2962802-2962891|CRISPRCasFinder
ATAAGCTATTGTTTTAACTACTAAATC	GAACTAAATCGAACTAAATCGAAAGCTATACATGCT
ATAACCTATTGTTTTAACTACTAAATC

Protein	Signature genes	Signature genes Name	Protein_function
LS483495.1\|SQJ43410.1\|2961721_2961934_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43406.1\|2959932_2960061_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43418.1\|2966356_2966668_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43408.1\|2960576_2960915_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43405.1\|2959526_2959784_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43402.1\|2956266_2958396_-\|phage-tail-tape-measure-protein,-lambda-family	unknown	unknown	gnl\|CDD\|370632
LS483495.1\|SQJ43403.1\|2958812_2959052_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43407.1\|2960133_2960565_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43413.1\|2963635_2964346_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43411.1\|2962212_2962464_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
LS483495.1\|SQJ43415.1\|2964886_2965312_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43414.1\|2964381_2964885_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|371764
LS483495.1\|SQJ43404.1\|2959048_2959180_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43417.1\|2965918_2966356_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43419.1\|2967390_2967717_+\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43409.1\|2961319_2961523_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43420.1\|2967709_2968711_+\|bacteriophage-P4-DNA-primase	unknown	unknown	gnl\|CDD\|226990
LS483495.1\|SQJ43416.1\|2965313_2965535_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43412.1\|2963336_2963633_-\|Uncharacterised-protein	unknown	unknown	unknown
LS483495.1\|SQJ43421.1\|2968667_2969171_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|372608

>LS483495.1|SQJ43411.1|2962212_2962464_-|transcriptional-regulator
MVKQDWHPAEILCALKKTGTSLAELSREHGLSSGTLQNALSKQYPRAEKIIADRLNIEPSEIWPSRYFKKDGTSIKRVIKKPI
>LS483495.1|SQJ43410.1|2961721_2961934_+|Uncharacterised-protein
MTKAETKRHLHGIYLEWIQGNMDTSEKELSFHGYICHLPDFSTFRFGAARDYQQTAIWVREWNEQLGINS
>LS483495.1|SQJ43409.1|2961319_2961523_-|Uncharacterised-protein
MKVFFAYMFIIAGGILVMYGATMKTTSGFSETLNIGLLFNQFEFIVVGALLFISGYIVSSTCNLSEE
>LS483495.1|SQJ43408.1|2960576_2960915_+|Uncharacterised-protein
MSVLVFCVIAMIFFAVFVGISKGIQSDWPVIKYRVKLIDGNAVSFFEVNGEIFTQIETDFLNRQGDGIYHFAGDKGGNAYITYRLINGKVWFWLSDNKDLDGVPIKFTREKN
>LS483495.1|SQJ43407.1|2960133_2960565_+|Uncharacterised-protein
MINTASALPISKEEALSLINKAEANLLKAKERLDYLTRKTYLIQLTINNKIYFLCDDDSLTEKFGSAIKFKRKCDAQQELMFYLERIDAVGNPNLKAILLLKKIYLEILSHTLRNKLTIKPILIIGSSNYQAQKAGYHARFTF
>LS483495.1|SQJ43406.1|2959932_2960061_-|Uncharacterised-protein
MIASSNEQEEECMSMRRVICSIDEQDLDIIENISFIIKINTE
>LS483495.1|SQJ43405.1|2959526_2959784_-|Uncharacterised-protein
MNERKTLVRLTDDEIKNILVARRDSAISKYKTEVQRFHSKHEKMGFSSMSGDFNETDVLVHGRLVLSLLNDILKAQQDIDTGYAK
>LS483495.1|SQJ43404.1|2959048_2959180_-|Uncharacterised-protein
MNNKKYGVFFWRKGENIEDVPSDINIANKGLSQERYLLIILRG
>LS483495.1|SQJ43403.1|2958812_2959052_-|Uncharacterised-protein
MRFKDKMNATIPNPQKEKYEYVLSEIVEPDKNETKNLFKSGNLTEALRTRRDIKRRNEMESMVKQGISDYLNANLGIKK
>LS483495.1|SQJ43402.1|2956266_2958396_-|phage-tail-tape-measure-protein,-lambda-family
MTGDNAELGFSVDTSEVKKGSDALDKLAQSAREATDAASKLADQMSKPVSIHAGGFYSGLASKTKEQLERAEQEISQNAKKAGGNWFTSFINGVKENHSAQRELGVMSHELMSGRWSNLRGSAAIMLGAAGMGGLAGTGVVMGITGLIEGIEALTESIQEAAQAQKDLQQSAILSGNAGALFTGKIDDIVNGLQTIKDASKETKEEFVSNALNSGLTPDFLKKNGSMLLQYQQEFGEKQTEALERILVETQTDATKGYTALYKMGGGLLDRVNKDIESGNYKSAGSDIMAGLLQGVKNQLRESQAENKELEGPSWVDDVLSYMGMGAFGYSVSGFQTQKKIIDGMQKKKQQIKTYNQEANDAIKKSVDSIASPKVNLESTKVFKDWGRYIHPSFSIHHGLTDAQRAAKKAAEEAARYAQQITDLTNRHEQLAESIDKSVNRRWANKNQPFSDLTSDAYDFEEVQSQINDQFDKMVDSVKTLAEHQHKSITSPEFVKQIAEINKMRGDALEDNLSGHNKYEDNLHSVLAGVKKGMKDYQETSDKVALQVAQVWDKSLDYMTDSLTDFFTTGEADWKNYLTDILKMIEKILVRDVIVQPASNYIGGLLGVSTGGSQAVDTVMSANSLPVPSVPNLSSSKSSGVGSSAFSGIQVIVNNNNGNVKGATQSDTKQGQDLGRTLQKAAQNWIKQQNVQSNKQGGVNRSMNSWSVK
>LS483495.1|SQJ43412.1|2963336_2963633_-|Uncharacterised-protein
MKDQYIETHIIIGQDNIPCIASMDDSGFICVTKLDSMDYDYISTAKAISDTDLLINEENPNNIKYFHRFLFDCDDKRIKSIMVCHKFDIMFMDCAVYG
>LS483495.1|SQJ43413.1|2963635_2964346_-|Uncharacterised-protein
MAPHINKRILQNGFLARCVFAYTDYVEKSKIPEENEIDFMAIKRYAKWISERVGEITATPEAEEFLEDKRKEYDLDEYRLNKEYGALYRRMSAKINKVASLLAVGNHDLKITLAQAKAAFKIVNDSFEQLKRLCDEGESTSEIVDFEDALELRIYKEINKYNGDWCTLGNLNDSAFKPRSIRAKLRLFKISTTSFLSSLQGKGYLESVSGARGGKCFKLTQKGRDRGDELLKIAGE
>LS483495.1|SQJ43414.1|2964381_2964885_-|Uncharacterised-protein
MPLGLVTFTVCESGAGKEMPQKIYDDIVIETGMAAAGKFTSTKTIYMDIYHGKHRAAFLSDEVHELLASMSSKRSEHMNGSEGALMTITESDKAKLTSTHRNEIIKLINEEIKGYKSQLAKLEQGINEDGHVIRDDKKKLIISAIDKKIELAKDEVKKYVKQVILIM
>LS483495.1|SQJ43415.1|2964886_2965312_-|Uncharacterised-protein
MTAERVIVGRDSDFIYYEDGTHSFIGQRSESELQAERNYYYPLGYPNEQKEVVEQNSPSGTLNSTTFFNNDAPSRINENPVNAPLENLGEDKNNSSAILPGYGNYIFEYMNAVAHRELKSASIMATLQTLSAISPKNKRLW
>LS483495.1|SQJ43416.1|2965313_2965535_-|Uncharacterised-protein
MSIIIESSTTPADLLSPSDAMKIAGISTAEWSHARKYRPEDFPKNYGTGFSRSQRFSAVEVTAFFNKYNKKGD
>LS483495.1|SQJ43417.1|2965918_2966356_-|Uncharacterised-protein
MNDALLILGIPALIGAAIGYTICFIKMRNATPQHIDLSEIKGYCEDIENRCVSASNQFIRGWFGDDVLAMGRIEKLVDHTYERLREISDREKQLNNTLKEILKSSAFLLSDAAETKEKLTELCMSVNSLSYRPRNIIADRISNKD
>LS483495.1|SQJ43418.1|2966356_2966668_-|Uncharacterised-protein
MVKNCSTTFFVWGLHTPVKKEVVEFRHAYAKNKFIMSYHTSSDVKKQDALQALYNHGFKWVVVHKGKIVFKIFYEYQALNYKRLMNLWGAKVVPVNDSILEFF
>LS483495.1|SQJ43419.1|2967390_2967717_+|Uncharacterised-protein
MTDTNYFKEKLRSMAIEKYVKENRKLIAAQISEQSQKVQLTGLVCGNDAVALSGVSKPMFYAAKRFNPKEFPQAIYQETEGYIWYRKQDIVDFFAKHPARRYGSKYNG
>LS483495.1|SQJ43420.1|2967709_2968711_+|bacteriophage-P4-DNA-primase
MANFFTDLNNHIKQNPIEYMRDFGIEIEPEKQMPCPIFGGVDRFEWRSKGPYANTGYCRNKSAHNEYHIIQPLKIIEAATNMRLLDIGAHIGFKQHGGYRNPKHFVMRNAPKKIISTREHSLSKLDSNRLDLFSNNVSNESKNATWRESPYLLNKGISKMMWVGGHGQTLLDYYRADGTLSALQRIPVEDKKSFIPNSQISGAFHCERNQDGNIETIFIGEGFGTVTAFQYSISDQYPSSLFLTAGNDNNLLNVATEARRCYPNADICILTDNDSHKDNAGLKATIKTMSQVNKCWWAMPVTASEDWCDVFQRGKFAVRDEFRRVLTDRKPSI
>LS483495.1|SQJ43421.1|2968667_2969171_+|Uncharacterised-protein
MNFEGFLQTASHQYNCKYQYCDFVDLFTKVSIHCPVHGKFERVGIYHLYGDECPSCQTNKTKTYYNYVMQTDNIVKIGRTANVYARMGELSFRLSRNCILNYLCSYNSRREAWDSERFAQTMFKQYQVSPFNLKFAGSSEFFKIMPSMAFSSLIISGGNPVYRTDGM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	197848-197877	5	0.833
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	MN693487	Marine virus AFVG_25M100, complete genome	26519-26550	5	0.844
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	MN694586	Marine virus AFVG_250M370, complete genome	25761-25792	5	0.844
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1396424-1396453	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	1357190-1357219	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	948050-948079	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1376648-1376677	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1988349-1988378	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	53578-53607	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1284767-1284796	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	500545-500574	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1553190-1553219	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1385054-1385083	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	350135-350164	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	351848-351877	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	417672-417701	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1602053-1602082	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	33033-33062	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1251202-1251231	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1303940-1303969	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	559858-559887	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	347399-347428	6	0.8
LS483495_2	2.3\|958578\|30\|LS483495\|PILER-CR	958578-958607	30	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	350135-350164	6	0.8
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	197846-197877	6	0.812
LS483495_3	3.14\|975722\|32\|LS483495\|CRISPRCasFinder,CRT	975722-975753	32	NZ_CP040831	Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete sequence	9568-9599	6	0.812
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1396422-1396453	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	350135-350166	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	351848-351879	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	1357188-1357219	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	417672-417703	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	948048-948079	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1376646-1376677	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1602053-1602084	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1988347-1988378	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	53576-53607	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	33033-33064	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1284765-1284796	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1251202-1251233	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	500543-500574	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1303940-1303971	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1553188-1553219	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1385052-1385083	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	559858-559889	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	347399-347430	7	0.781
LS483495_2	2.6\|958578\|32\|LS483495\|CRISPRCasFinder,CRT	958578-958609	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	350135-350166	7	0.781
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	NZ_CP032753	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed2, complete sequence	31116-31147	7	0.781
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	NZ_CP028245	Lactobacillus plantarum strain SRCM101518 plasmid unnamed4, complete sequence	6170-6201	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	1121656-1121687	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	1007076-1007107	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	923177-923208	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	1013012-1013043	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	1007075-1007106	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	1121656-1121687	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	CP003950	Rhodococcus opacus PD630 plasmid 1, complete sequence	16751-16782	7	0.781
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	517405-517436	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	663096-663127	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	1134102-1134133	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	986764-986795	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	1133811-1133842	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	1076758-1076789	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	590198-590229	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	645850-645881	8	0.75
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	1030118-1030149	8	0.75
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	933447-933478	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	2070280-2070311	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	2079231-2079262	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	413525-413556	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1971559-1971590	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1971561-1971592	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1966138-1966169	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1966786-1966817	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1966162-1966193	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1966162-1966193	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1966162-1966193	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1966162-1966193	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	MN234234	Arthrobacter phage Lymara, complete genome	1522-1553	9	0.719
LS483495_3	3.7\|975295\|32\|LS483495\|CRISPRCasFinder,CRT	975295-975326	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	251394-251425	9	0.719
LS483495_3	3.8\|975356\|32\|LS483495\|CRISPRCasFinder,CRT	975356-975387	32	MN602881	Erwinia phage Midgardsormr38, complete genome	40727-40758	9	0.719
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_AP014707	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_3p, complete sequence	4840-4871	9	0.719
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP050095	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence	106365-106396	9	0.719
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	303433-303464	9	0.719
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	25946-25977	9	0.719
LS483495_4	4.1\|2095843\|32\|LS483495\|PILER-CR,CRISPRCasFinder,CRT	2095843-2095874	32	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	658343-658374	9	0.719
LS483495_4	4.7\|2096209\|32\|LS483495\|PILER-CR,CRISPRCasFinder,CRT	2096209-2096240	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	368998-369029	9	0.719
LS483495_4	4.10\|2096392\|32\|LS483495\|PILER-CR,CRISPRCasFinder,CRT	2096392-2096423	32	NZ_CP034087	Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence	310958-310989	9	0.719
LS483495_4	4.11\|2096453\|32\|LS483495\|CRISPRCasFinder,CRT	2096453-2096484	32	MF417881	Uncultured Caudovirales phage clone 7AX_3, partial genome	10140-10171	9	0.719
LS483495_4	4.11\|2096453\|32\|LS483495\|CRISPRCasFinder,CRT	2096453-2096484	32	MF417844	Uncultured Caudovirales phage clone 8AX_10, partial genome	7152-7183	9	0.719
LS483495_4	4.11\|2096453\|32\|LS483495\|CRISPRCasFinder,CRT	2096453-2096484	32	MF417989	Uncultured Caudovirales phage clone 7F_4, partial genome	5514-5545	9	0.719
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	645312-645343	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1973655-1973686	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	2050792-2050823	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1934499-1934530	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	2148359-2148390	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1983341-1983372	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1869696-1869727	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	2004911-2004942	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	666936-666967	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1950490-1950521	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	2048139-2048170	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1934677-1934708	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1985366-1985397	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	144926-144957	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1698527-1698558	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	448412-448443	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1985601-1985632	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	579539-579570	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1020273-1020304	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	214891-214922	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	2056469-2056500	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	2020207-2020238	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1766095-1766126	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1991153-1991184	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	2119732-2119763	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1868716-1868747	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1986843-1986874	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	2059591-2059622	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1869040-1869071	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1869089-1869120	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1869676-1869707	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1922464-1922495	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1986664-1986695	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	2067939-2067970	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	2059516-2059547	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1960363-1960394	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	2038604-2038635	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	2060299-2060330	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	2079245-2079276	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1960676-1960707	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	2038604-2038635	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	2060419-2060450	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1960364-1960395	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1973846-1973877	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1959567-1959598	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	2038604-2038635	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	2038604-2038635	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	2038604-2038635	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	2060394-2060425	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	2119790-2119821	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	2060425-2060456	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1974039-1974070	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1973844-1973875	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1954671-1954702	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	2018748-2018779	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	2046869-2046900	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	2035919-2035950	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	2060425-2060456	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1960675-1960706	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1994311-1994342	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	2059381-2059412	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	2060415-2060446	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	2038609-2038640	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	2118740-2118771	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	2060447-2060478	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	2060248-2060279	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	2118740-2118771	10	0.688
LS483495_3	3.1\|974929\|32\|LS483495\|CRISPRCasFinder,CRT	974929-974960	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1973808-1973839	10	0.688
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	NC_047925	Lactobacillus phage Nyseid, complete genome	64652-64683	10	0.688
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	KU052488	Lactobacillus phage SA-C12, complete genome	21321-21352	10	0.688
LS483495_3	3.6\|975234\|32\|LS483495\|CRISPRCasFinder,CRT	975234-975265	32	NC_047897	Lactobacillus phage Lenus, complete genome	62200-62231	10	0.688
LS483495_3	3.10\|975478\|32\|LS483495\|CRISPRCasFinder,CRT	975478-975509	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	654274-654305	10	0.688
LS483495_3	3.21\|976150\|32\|LS483495\|CRISPRCasFinder,CRT	976150-976181	32	MH617304	Microviridae sp. isolate cthh626, complete genome	2664-2695	10	0.688
LS483495_4	4.7\|2096209\|32\|LS483495\|PILER-CR,CRISPRCasFinder,CRT	2096209-2096240	32	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	98351-98382	10	0.688
LS483495_4	4.1\|2095843\|32\|LS483495\|PILER-CR,CRISPRCasFinder,CRT	2095843-2095874	32	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	852225-852256	11	0.656

1. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 5, identity: 0.833

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
acgtgatcgaacatctgcgcgcccagggca	Protospacer
**..* ***** *****************

2. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to MN693487 (Marine virus AFVG_25M100, complete genome) position: , mismatch: 5, identity: 0.844

cagatttga--atgaattgtccaaacaatcttta	CRISPR spacer
--gattagatgatgaattgtataaacaatcttta	Protospacer
  **** **  ********* .************

3. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to MN694586 (Marine virus AFVG_250M370, complete genome) position: , mismatch: 5, identity: 0.844

cagatttga--atgaattgtccaaacaatcttta	CRISPR spacer
--gattagatgatgaattgtataaacaatcttta	Protospacer
  **** **  ********* .************

4. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

5. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

6. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

7. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

8. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

9. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

10. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

11. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

12. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

13. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

14. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

15. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

16. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

17. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

18. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

19. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

20. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

21. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

22. spacer 2.3|958578|30|LS483495|PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

23. spacer 2.3|958578|30|LS483495|PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.8

acacgttcgaaaatctgcgcgcccagggct	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggct	Protospacer
*  *  ****.*********** *******

24. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 6, identity: 0.812

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
acgtgatcgaacatctgcgcgcccagggcatg	Protospacer
**..* ***** *****************  *

25. spacer 3.14|975722|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP040831 (Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgataag-tgcaaaattcggagattaaagaa	CRISPR spacer
-tttatgagctgcaaaatgcggagattaaagaa	Protospacer
  . **.** ******** **************

26. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

27. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

28. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

29. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

30. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

31. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

32. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

33. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

34. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

35. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

36. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

37. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

38. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

39. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

40. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

41. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

42. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

43. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

44. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

45. spacer 2.6|958578|32|LS483495|CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

acacgttcgaaaatctgcgcgcccagggctgg	CRISPR spacer
agcctgtcgagaatctgcgcgcgcagggctgc	Protospacer
*  *  ****.*********** ********

46. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP032753 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatttgaatgaattgtccaaacaatcttta	CRISPR spacer
ccaatttgaatgaattatccaaacaacccctt	Protospacer
* .*************.*********.*..*

47. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP028245 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

cagatttgaatgaattgtccaaacaatcttta	CRISPR spacer
ccaatttgaatgaattatccaaacaacccctt	Protospacer
* .*************.*********.*..*

48. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 7, identity: 0.781

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtagg-cgccgcgcacctcttccgagccgaa	Protospacer
 **.**. .******** **** *********

49. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 7, identity: 0.781

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtagg-cgccgcgcacctcttccgagccgaa	Protospacer
 **.**. .******** **** *********

50. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 7, identity: 0.781

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtagg-cgccgcgcacctcttccgagccgaa	Protospacer
 **.**. .******** **** *********

51. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 7, identity: 0.781

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtagg-cgccgcgcacctcttccgagccgaa	Protospacer
 **.**. .******** **** *********

52. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 7, identity: 0.781

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtagg-cgccgcgcacctcttccgagccgaa	Protospacer
 **.**. .******** **** *********

53. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 7, identity: 0.781

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtagg-cgccgcgcacctcttccgagccgaa	Protospacer
 **.**. .******** **** *********

54. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to CP003950 (Rhodococcus opacus PD630 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

cgcagattgccgcgcagctctgccgagccgac--	CRISPR spacer
cgcagatcgccgcgcagctcggc--gtcccaccc	Protospacer
*******.************ **  . ** **

55. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

56. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

57. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

58. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

59. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

60. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

61. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

62. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

63. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 8, identity: 0.75

-cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
acgtaag-cgccgcgcacctcttccgagccgaa	Protospacer
 **.*.. .******** **** *********

64. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cggaaacacattgagccggtgatacaggtcgg	Protospacer
   *********** ****** ******  .

65. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

66. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

67. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

68. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

69. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

70. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

71. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

72. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

73. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

74. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

75. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcag	Protospacer
   .********** ****** ******  *

76. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to MN234234 (Arthrobacter phage Lymara, complete genome) position: , mismatch: 9, identity: 0.719

-gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgttcggt-cattgacccgctgctagaggaaac	Protospacer
 *.* ... ********** ***** ******.

77. spacer 3.7|975295|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgaaccgtactcaacctcaaaaaaatca	CRISPR spacer
acggccggccgtactcaacctcaaacgaatct	Protospacer
.. ** ..***************** .****

78. spacer 3.8|975356|32|LS483495|CRISPRCasFinder,CRT matches to MN602881 (Erwinia phage Midgardsormr38, complete genome) position: , mismatch: 9, identity: 0.719

gcaaagaaacgcagcgcggcctgacctggtac	CRISPR spacer
aaaaccaaaagcagagcggcctgacctggcta	Protospacer
. **  *** **** **************.

79. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_AP014707 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_3p, complete sequence) position: , mismatch: 9, identity: 0.719

cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
tcggccttgccgcgcagcgcggccgagccgaa	Protospacer
.  .  ************ * **********

80. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
aggacgaggccgcgcagctctgctgaaccgag	Protospacer
 * * .  ***************.**.****

81. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.719

cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
aggacgaggccgcgcagctctgctgaaccgag	Protospacer
 * * .  ***************.**.****

82. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
aggacgaggccgcgcagctctgcggaaccgag	Protospacer
 * * .  *************** **.****

83. spacer 4.1|2095843|32|LS483495|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gattacgcctgatatccgccatcatccaggaa	CRISPR spacer
ggattggcctgatagccgccatcctccagacg	Protospacer
*. *  ******** ******** *****. .

84. spacer 4.7|2096209|32|LS483495|PILER-CR,CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 9, identity: 0.719

catcgtaactgtcagcttctccccagtaatca	CRISPR spacer
gctcgcaactgtcagcttcgccccactgtcct	Protospacer
  ***.************* ***** *. .*

85. spacer 4.10|2096392|32|LS483495|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034087 (Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence) position: , mismatch: 9, identity: 0.719

acccgacccgcgtacgcgtatttgagaatgac	CRISPR spacer
gacagcgaggcgttcgcgtaattgagaatgac	Protospacer
. * *    **** ****** ***********

86. spacer 4.11|2096453|32|LS483495|CRISPRCasFinder,CRT matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 9, identity: 0.719

-gtcacgaggtgattcacttggtactggctgat	CRISPR spacer
tattgc-aggtgaatcacttggtagtggcttca	Protospacer
 .*..* ****** ********** *****

87. spacer 4.11|2096453|32|LS483495|CRISPRCasFinder,CRT matches to MF417844 (Uncultured Caudovirales phage clone 8AX_10, partial genome) position: , mismatch: 9, identity: 0.719

-gtcacgaggtgattcacttggtactggctgat	CRISPR spacer
tattgc-aggtgaatcacttggtagtggcttca	Protospacer
 .*..* ****** ********** *****

88. spacer 4.11|2096453|32|LS483495|CRISPRCasFinder,CRT matches to MF417989 (Uncultured Caudovirales phage clone 7F_4, partial genome) position: , mismatch: 9, identity: 0.719

-gtcacgaggtgattcacttggtactggctgat	CRISPR spacer
tattgc-aggtgaatcacttggtagtggcttca	Protospacer
 .*..* ****** ********** *****

89. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

90. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

91. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

92. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cggaaacacattgagccggtggtacagatcgg	Protospacer
   *********** ****** *****.  .

93. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cggaaacacattgagccggtggtacagatcgg	Protospacer
   *********** ****** *****.  .

94. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

95. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

96. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

97. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

98. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

99. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

100. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cggaaacacattgagccggtggtacagatcgg	Protospacer
   *********** ****** *****.  .

101. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cggaaacacattgagccggtggtacagatcgg	Protospacer
   *********** ****** *****.  .

102. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

103. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

104. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

105. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

106. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

107. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

108. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

109. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

110. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

111. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

112. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

113. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

114. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

115. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

116. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

117. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

118. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

119. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

120. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

121. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

122. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

123. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

124. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

125. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

126. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

127. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

128. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

129. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

130. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

131. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

132. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

133. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

134. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

135. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

136. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

137. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

138. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

139. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

140. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

141. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

142. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

143. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

144. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

145. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

146. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

147. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

148. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

149. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

150. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

151. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

152. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

153. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

154. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

155. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

156. spacer 3.1|974929|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gctaaacacattgacccggtgctacaggaaat	CRISPR spacer
cgggaacacattgagccggtggtacaggtcgg	Protospacer
   .********** ****** ******  .

157. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to NC_047925 (Lactobacillus phage Nyseid, complete genome) position: , mismatch: 10, identity: 0.688

cagatttgaatgaattgtccaaacaatcttta	CRISPR spacer
attttttgaatgatttgtccaaataattcatc	Protospacer
    ********* *********.***.. *

158. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to KU052488 (Lactobacillus phage SA-C12, complete genome) position: , mismatch: 10, identity: 0.688

cagatttgaatgaattgtccaaacaatcttta	CRISPR spacer
atcttttgaatgatttgtccaaataattcatc	Protospacer
    ********* *********.***.. *

159. spacer 3.6|975234|32|LS483495|CRISPRCasFinder,CRT matches to NC_047897 (Lactobacillus phage Lenus, complete genome) position: , mismatch: 10, identity: 0.688

cagatttgaatgaattgtccaaacaatcttta	CRISPR spacer
attttttgaatgatttgtccaaataattcatc	Protospacer
    ********* *********.***.. *

160. spacer 3.10|975478|32|LS483495|CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

cgcagattgccgcgcagctctgccgagccgac	CRISPR spacer
tcgggatcgccgcgcagctccgccgaggggcg	Protospacer
.  .***.************.******  *

161. spacer 3.21|976150|32|LS483495|CRISPRCasFinder,CRT matches to MH617304 (Microviridae sp. isolate cthh626, complete genome) position: , mismatch: 10, identity: 0.688

tttgtaccctacttgttttgttgaatggtggt	CRISPR spacer
gcacgatcctgctcgttttgttgaatggtgtg	Protospacer
 .   *.***.**.****************

162. spacer 4.7|2096209|32|LS483495|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 10, identity: 0.688

catcgtaactgtcagcttctccccagtaatca	CRISPR spacer
tttggtaactgtcagattctccccggtcgcac	Protospacer
. * *********** ********.** ..

163. spacer 4.1|2095843|32|LS483495|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 11, identity: 0.656

gattacgcctgatatccgccatcatccaggaa	CRISPR spacer
ccaagggcctgaaatccggcatcatccagcgc	Protospacer
    . ****** ***** ********** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1641640 : 1650207

Enterobacteria_phage(66.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ40070.1\|1641640_1642588_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	6.2e-10	27.8
SQJ40071.1\|1642571_1643303_+	putative permease transmembrane component	NA	NA	NA	NA
SQJ40072.1\|1643283_1643391_-	membrane protein	NA	NA	NA	NA
SQJ40073.1\|1643450_1644182_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
SQJ40074.1\|1644404_1646090_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	2.9e-276	90.6
SQJ40075.1\|1646086_1646806_+	two-component system response regulator	NA	NA	NA	NA
SQJ40076.1\|1646852_1647323_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	8.0e-75	90.4
SQJ40077.1\|1647474_1647933_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.9e-55	74.5
SQJ40078.1\|1648173_1650207_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	2.8e-55	27.6

DBSCAN-SWA_2

2395705 : 2410635

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ42398.1\|2395705_2396794_-	starvation sensing protein RspA	Q6A202	Oenococcus_phage	8.4e-43	29.8
SQJ42399.1\|2397040_2397367_-	UPF0060 membrane protein CKO_01576	A0A218MNG8	uncultured_virus	2.9e-23	52.0
SQJ42400.1\|2397520_2397862_+	putative secreted protein	NA	NA	NA	NA
SQJ42401.1\|2397897_2398458_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
SQJ42402.1\|2398497_2399244_-	Hypothetical UPF0257 lipoprotein ynfC precursor	NA	NA	NA	NA
SQJ42403.1\|2399315_2399621_+	outer membrane protein	NA	NA	NA	NA
SQJ42404.1\|2399771_2402312_+	dimethyl sulfoxide reductase, subunit A1	A0A077SK27	Escherichia_phage	4.4e-212	48.8
SQJ42405.1\|2402308_2403526_+	dimethyl sulfoxide reductase subunit	A0A077SK27	Escherichia_phage	9.0e-70	47.7
SQJ42406.1\|2404001_2404742_+	dimethyl sulfoxide reductase subunit	A0A077SK27	Escherichia_phage	6.9e-57	47.1
SQJ42407.1\|2404751_2405369_+	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.6e-75	59.1
SQJ42408.1\|2405370_2406228_+	dimethyl sulfoxide reductase subunit H	A0A077SK59	Escherichia_phage	1.1e-21	33.9
SQJ42409.1\|2406270_2406885_+	Anaerobic dimethyl sulfoxide reductasechaperone DmsD	A0A077SLS7	Escherichia_phage	9.6e-28	37.3
SQJ42410.1\|2407189_2407900_+	ABC transporter membrane protein	NA	NA	NA	NA
SQJ42411.1\|2407928_2408240_+	ABC transporter periplasmic binding protein	NA	NA	NA	NA
SQJ42412.1\|2408287_2408830_+	ABC transporter periplasmic binding protein	NA	NA	NA	NA
SQJ42413.1\|2408839_2409487_+	ABC transporter membrane protein	NA	NA	NA	NA
SQJ42414.1\|2409486_2410635_+	ABC transporter ATP/GTP-binding protein	G9BWD6	Planktothrix_phage	2.2e-25	33.9

DBSCAN-SWA_3

2646815 : 2688666

Salmonella_phage(24.0%)

protease,integrase,tail,holin,terminase

attL 2656829:2656844|attR 2672530:2672545

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ42850.1\|2646815_2650721_-\|protease	hemoglobin protease	Q9LA54	Enterobacteria_phage	2.6e-288	41.8
SQJ42851.1\|2651459_2651789_+	phage-like protein	NA	NA	NA	NA
SQJ42852.1\|2652169_2653543_+	phage-like protein	NA	NA	NA	NA
SQJ42853.1\|2653856_2654258_+	Inhibitor of g-type lysozyme	NA	NA	NA	NA
SQJ42854.1\|2654353_2654521_+	Uncharacterised protein	NA	NA	NA	NA
SQJ42855.1\|2654799_2655090_+	Bor protein	C6ZCX3	Enterobacteria_phage	1.2e-33	71.9
SQJ42856.1\|2655573_2656521_+\|protease	outer membrane protease	NA	NA	NA	NA
SQJ42857.1\|2656769_2658473_+	phage-like protein	NA	NA	NA	NA
2656829:2656844	attL	NA	NA	NA	NA
SQJ42858.1\|2658420_2658702_-	Uncharacterised protein	NA	NA	NA	NA
SQJ42859.1\|2658730_2659687_+	phage-like protein	NA	NA	NA	NA
SQJ42860.1\|2659650_2659914_+	phage-like protein	NA	NA	NA	NA
SQJ42861.1\|2660234_2662742_+	invasion plasmid antigen / internalinputative	NA	NA	NA	NA
SQJ42862.1\|2662820_2663033_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	92.6
SQJ42863.1\|2663285_2663957_+	Gifsy-2 prophage protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.4e-80	61.3
SQJ42864.1\|2664098_2665217_-	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	8.0e-174	95.9
SQJ42865.1\|2665219_2665639_-	Error-prone repair protein UmuD	A0A1W6JNS2	Morganella_phage	5.0e-36	59.1
SQJ42866.1\|2666589_2666973_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	2.4e-21	46.9
SQJ42867.1\|2667983_2668157_-	Uncharacterised protein	NA	NA	NA	NA
SQJ42868.1\|2669352_2669595_+	phage-like protein	NA	NA	NA	NA
SQJ42869.1\|2669663_2670011_-	HtrL protein	NA	NA	NA	NA
SQJ42870.1\|2671235_2672690_-\|tail	side tail fiber protein	E5G6P0	Salmonella_phage	1.8e-40	68.8
2672530:2672545	attR	NA	NA	NA	NA
SQJ42871.1\|2672679_2673963_-	gp33 TerL	A0A0M5M1R6	Salmonella_phage	1.2e-152	83.8
SQJ42872.1\|2674020_2674650_-\|terminase	putative prophage terminase small subunit	A0A0M3ULJ9	Salmonella_phage	3.3e-108	98.1
SQJ42873.1\|2674724_2674895_-	Uncharacterised protein	NA	NA	NA	NA
SQJ42874.1\|2674891_2675404_-	Uncharacterised protein	NA	NA	NA	NA
SQJ42875.1\|2675458_2675941_-	Phage outer membrane lytic protein Rz, Endopeptidase	Q56118	Enterobacteria_phage	1.3e-51	66.9
SQJ42876.1\|2675925_2676414_-	lysozyme	M9P0E5	Enterobacteria_phage	2.1e-57	68.1
SQJ42877.1\|2676391_2676700_-\|holin	phage-holin analog protein	NA	NA	NA	NA
SQJ42878.1\|2676885_2677431_+	Uncharacterised protein	NA	NA	NA	NA
SQJ42879.1\|2677421_2677628_-	Uncharacterised protein	NA	NA	NA	NA
SQJ42880.1\|2678028_2678553_-	Uncharacterised protein	NA	NA	NA	NA
SQJ42881.1\|2678813_2679182_-	phage antitermination protein Q	I6PDF8	Cronobacter_phage	1.3e-32	58.8
SQJ42882.1\|2679487_2679694_-	gifsy-1 prophage NinG	A0A0M4RU10	Salmonella_phage	1.0e-05	54.9
SQJ42998.1\|2679968_2680289_-	IrsA	A0A0U2RT94	Escherichia_phage	3.5e-42	80.4
SQJ43000.1\|2680352_2680658_-	putative bacteriophage cohesive ends	NA	NA	NA	NA
SQJ43001.1\|2681886_2682555_-	Replication protein 14	A0A0U2JGJ0	Escherichia_phage	8.7e-67	74.8
SQJ43002.1\|2682661_2683177_-	replication protein	A0A0U2RT81	Escherichia_phage	8.5e-46	60.9
SQJ43019.1\|2683127_2683343_-	replication protein	A0A0U2RT81	Escherichia_phage	2.2e-24	88.1
SQJ43020.1\|2683872_2684127_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	5.5e-22	67.5
SQJ43021.1\|2684244_2684703_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	1.9e-52	70.1
SQJ43025.1\|2684738_2685059_+	Uncharacterised protein	A0A222YY67	Escherichia_phage	3.6e-34	60.2
SQJ43027.1\|2685051_2685384_+	bacteriophage protein	S4TNP2	Salmonella_phage	8.8e-20	81.8
SQJ43028.1\|2685380_2685884_+	Eaa protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
SQJ43029.1\|2686159_2687302_+	Integrase	O21929	Phage_21	2.4e-173	80.0
SQJ43030.1\|2687415_2688666_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	90.7

DBSCAN-SWA_4

2956266 : 3025900

Cronobacter_phage(59.09%)

integrase,tail,capsid,plate,terminase

attL 2994435:2994449|attR 3025975:3025989

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ43402.1\|2956266_2958396_-\|tail	phage tail tape measure protein, lambda family	F2VWZ5	Shigella_virus	3.2e-06	21.8
SQJ43403.1\|2958812_2959052_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43404.1\|2959048_2959180_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43405.1\|2959526_2959784_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43406.1\|2959932_2960061_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43407.1\|2960133_2960565_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43408.1\|2960576_2960915_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43409.1\|2961319_2961523_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43410.1\|2961721_2961934_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43411.1\|2962212_2962464_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	8.4e-15	58.2
SQJ43412.1\|2963336_2963633_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43413.1\|2963635_2964346_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43414.1\|2964381_2964885_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43415.1\|2964886_2965312_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43416.1\|2965313_2965535_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43417.1\|2965918_2966356_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43418.1\|2966356_2966668_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43419.1\|2967390_2967717_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43420.1\|2967709_2968711_+	bacteriophage P4 DNA primase	NA	NA	NA	NA
SQJ43421.1\|2968667_2969171_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43422.1\|2969279_2970632_-\|integrase	Site-specific recombinase, phage integrase	NA	NA	NA	NA
SQJ43423.1\|2970738_2971752_+	oxidoreductase	NA	NA	NA	NA
SQJ43424.1\|2971748_2972579_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	1.1e-07	30.1
SQJ43425.1\|2972575_2972899_-	cytoplasmic protein	NA	NA	NA	NA
SQJ43426.1\|2973026_2973542_+	lipoprotein	NA	NA	NA	NA
SQJ43427.1\|2973452_2973626_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43428.1\|2973770_2974499_+	Glutamine transport ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	3.9e-28	35.8
SQJ43429.1\|2974516_2975248_+	arginine ABC transporter ATP-binding protein	NA	NA	NA	NA
SQJ43430.1\|2975254_2975971_+	arginine transporter permease ArtQ	NA	NA	NA	NA
SQJ43431.1\|2975970_2976639_+	arginine transporter permease ArtM	NA	NA	NA	NA
SQJ43432.1\|2976875_2977607_+	arginine-binding periplasmic protein 2	NA	NA	NA	NA
SQJ43433.1\|2977782_2979195_+	arylsulfate sulfo transferase	NA	NA	NA	NA
SQJ43434.1\|2979280_2980768_-	sulfatase	NA	NA	NA	NA
SQJ43435.1\|2980777_2981098_-	phosphotransferase enzyme II, B component	NA	NA	NA	NA
SQJ43436.1\|2981129_2982473_-	PTS transport protein, component II	NA	NA	NA	NA
SQJ43437.1\|2982755_2983886_-	RNA methyltransferase	A0A1X9I6F4	Streptococcus_phage	1.2e-23	26.1
SQJ43438.1\|2983928_2984330_-	membrane protein	NA	NA	NA	NA
SQJ43439.1\|2984475_2985321_-	putrescine ABC transporter membrane protein	NA	NA	NA	NA
SQJ43440.1\|2985317_2986271_-	putrescine transporter permease PotH	NA	NA	NA	NA
SQJ43441.1\|2986280_2987414_-	putrescine transport ATP-binding protein PotG	G3M9Y6	Bacillus_virus	1.1e-29	34.9
SQJ43442.1\|2987501_2988617_-	putrescine ABC transporter periplasmic-binding protein	NA	NA	NA	NA
SQJ43443.1\|2988962_2989439_-	putative sensory transduction regulator	NA	NA	NA	NA
SQJ43444.1\|2989535_2990438_-	ribosomal protein S6 modification protein	A0A1D7SR78	Cyanophage	5.9e-34	33.6
SQJ43445.1\|2990495_2991218_-	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA
SQJ43446.1\|2991201_2991492_-	membrane protein	NA	NA	NA	NA
SQJ43447.1\|2991661_2991925_+	glutaredoxin	A0A2I7SAE2	Vibrio_phage	3.5e-27	70.5
SQJ43448.1\|2991956_2992334_-	membrane protein	NA	NA	NA	NA
SQJ43449.1\|2992604_2994290_+	transporter	NA	NA	NA	NA
2994435:2994449	attL	NA	NA	NA	NA
SQJ43450.1\|2994606_2994732_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43451.1\|2994752_2995103_+	Uncharacterised protein	NA	NA	NA	NA
SQJ43452.1\|2995621_2997325_-	phage protein	F1BUJ7	Cronobacter_phage	1.2e-221	80.9
SQJ43453.1\|2997374_2997869_-	phage protein	F1BUJ9	Cronobacter_phage	1.0e-51	78.7
SQJ43454.1\|2997840_2998566_-	phage protein	F1BUK1	Cronobacter_phage	2.3e-68	56.8
SQJ43455.1\|2998555_2999083_-	phage protein	A0A0U2QV64	Escherichia_phage	1.1e-51	53.1
SQJ43456.1\|2999100_3001128_-\|tail	phage tail protein	F1BUK3	Cronobacter_phage	3.1e-155	47.7
SQJ43457.1\|3001137_3001725_-\|tail	Bacteriophage P2-related tail formation protein	F1BUK5	Cronobacter_phage	2.2e-90	82.6
SQJ43458.1\|3001809_3002901_-\|plate	Phage baseplate	F1BUK6	Cronobacter_phage	8.4e-168	81.1
SQJ43459.1\|3002897_3003227_-	phage protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
SQJ43460.1\|3003223_3005194_-\|tail	Phage-related tail protein	F1BUK9	Cronobacter_phage	2.9e-275	71.4
SQJ43461.1\|3005381_3005639_-	putative phage gene	A5X9I7	Aeromonas_virus	3.6e-21	63.4
SQJ43462.1\|3005785_3006118_-	putative phage-related protein	F1BUL2	Cronobacter_phage	6.7e-36	70.9
SQJ43463.1\|3006117_3006459_-	hypothetical phage-related protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
SQJ43464.1\|3006455_3006749_-	Holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
SQJ43465.1\|3006758_3007214_-	phage protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
SQJ43466.1\|3007210_3008338_-	Topoisomerase IA	F1BUL5	Cronobacter_phage	1.9e-175	83.7
SQJ43467.1\|3008334_3008979_-	Phage virion morphogenesis protein	F1BUL6	Cronobacter_phage	3.4e-92	76.5
SQJ43468.1\|3009037_3009481_-	putative phage gene	F1BUL7	Cronobacter_phage	6.0e-56	70.4
SQJ43469.1\|3009467_3010043_-	putative phage gene	F1BUL8	Cronobacter_phage	1.3e-63	81.2
SQJ43470.1\|3010088_3010283_-	Uncharacterised protein	Q8W634	Enterobacteria_phage	3.3e-11	58.6
SQJ43471.1\|3010286_3010991_-\|terminase	phage terminase subunit	F1BUM0	Cronobacter_phage	4.7e-87	67.4
SQJ43472.1\|3010994_3012017_-\|capsid	Phage major capsid protein	F1BUM2	Cronobacter_phage	1.1e-158	81.2
SQJ43473.1\|3012078_3012882_-\|capsid	putative capsid scaffolding protein	F1BUM4	Cronobacter_phage	7.0e-79	56.4
SQJ43474.1\|3013042_3014818_+\|terminase	Phage terminase ATPase subunit	F1BUM5	Cronobacter_phage	5.2e-292	83.6
SQJ43475.1\|3014870_3015875_+	Membrane protein	F1BUM7	Cronobacter_phage	7.0e-161	79.6
SQJ43476.1\|3015925_3016195_+	zinc-finger protein	F1BUM8	Cronobacter_phage	5.1e-42	94.3
SQJ43477.1\|3016168_3016381_-	bacteriophage protein	E5G6M0	Salmonella_phage	7.1e-07	50.9
SQJ43478.1\|3016618_3018250_-	Phage replication protein	F1BUM9	Cronobacter_phage	1.6e-239	76.2
SQJ43479.1\|3018302_3018521_-	Phage replication protein	F1BUM9	Cronobacter_phage	3.7e-19	67.2
SQJ43480.1\|3018517_3019378_-	putative phage gene	F1BUN1	Cronobacter_phage	7.6e-132	82.7
SQJ43481.1\|3019367_3019697_-	gp91	C9E2N9	Enterococcus_phage	1.7e-10	44.2
SQJ43482.1\|3019693_3020134_-	Eaa protein	Q5G8V2	Enterobacteria_phage	2.8e-13	66.0
SQJ43483.1\|3020124_3020379_-	Protein of uncharacterised function (DUF2732)	NA	NA	NA	NA
SQJ43484.1\|3020446_3020848_-	Uncharacterised protein	F1BUN2	Cronobacter_phage	1.9e-48	66.9
SQJ43485.1\|3020847_3021042_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43486.1\|3021262_3021490_-	Uncharacterised protein	NA	NA	NA	NA
SQJ43487.1\|3021499_3021730_-	phage protein	F1BUN6	Cronobacter_phage	1.4e-24	84.2
SQJ43488.1\|3021750_3022002_-	phage protein	E5G6L3	Salmonella_phage	2.3e-20	61.8
SQJ43489.1\|3022594_3022951_+	repressor protein	NA	NA	NA	NA
SQJ43490.1\|3022962_3024744_+	Abortive phage infection protein AIPR	NA	NA	NA	NA
SQJ43491.1\|3024848_3025241_+\|integrase	probable bacteriophage integrase	A0A1S6L016	Salmonella_phage	7.4e-34	53.4
SQJ43492.1\|3025216_3025900_+\|integrase	probable bacteriophage integrase	A0A218M4I3	Erwinia_phage	6.4e-73	61.8
3025975:3025989	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3407701 : 3467180

Bacillus_phage(21.43%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ43876.1\|3407701_3408619_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
SQJ43877.1\|3408615_3409026_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
SQJ43878.1\|3409067_3409484_-	copper efflux regulator	NA	NA	NA	NA
SQJ43879.1\|3409592_3410201_+	Lead cadmium zinc and mercury transporting ATPase	NA	NA	NA	NA
SQJ43880.1\|3410197_3412093_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	1.8e-104	40.5
SQJ43881.1\|3413226_3413706_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
SQJ43882.1\|3413829_3414216_-	UDP-sugar hydrolase	NA	NA	NA	NA
SQJ43883.1\|3414167_3415481_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
SQJ43884.1\|3415653_3416874_+	fosmidomycin resistance protein	NA	NA	NA	NA
SQJ43885.1\|3417088_3418765_+	transport protein	NA	NA	NA	NA
SQJ43886.1\|3418813_3420118_-	inosine/guanosine kinase	NA	NA	NA	NA
SQJ43887.1\|3420270_3421242_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	1.7e-15	27.9
SQJ43888.1\|3421238_3422201_-	ferrochelatase	NA	NA	NA	NA
SQJ43889.1\|3422402_3423047_-	adenylate kinase	NA	NA	NA	NA
SQJ43890.1\|3423252_3424239_-	invertase	NA	NA	NA	NA
SQJ43892.1\|3424490_3426365_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	3.4e-116	37.1
SQJ43894.1\|3426475_3427081_-	recombination protein RecR	NA	NA	NA	NA
SQJ43895.1\|3427080_3427410_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
SQJ43897.1\|3428384_3429314_-	DNA polymerase III subunits gamma and tau	A0A1L2BWV7	Bacteriophage	4.1e-38	42.0
SQJ43898.1\|3429495_3430047_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.0e-28	45.2
SQJ43899.1\|3430199_3430577_-	Inner membrane protein YbaN	NA	NA	NA	NA
SQJ43900.1\|3430657_3431173_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
SQJ43901.1\|3431186_3431354_+	Putative inner membrane protein	NA	NA	NA	NA
SQJ43902.1\|3431423_3431879_+	Transposase_31	Q2A0A7	Sodalis_phage	3.1e-39	54.9
SQJ43903.1\|3431980_3432472_+\|transposase	Putative transposase	Q2A0A7	Sodalis_phage	7.9e-17	48.0
SQJ43904.1\|3432513_3435876_-	integral membrane protein AefA	NA	NA	NA	NA
SQJ43905.1\|3435994_3436648_-	potential acrAB operon repressor	NA	NA	NA	NA
SQJ43906.1\|3436789_3437983_+	acriflavin resistance protein A	NA	NA	NA	NA
SQJ43907.1\|3438005_3439979_+	acriflavin resistance protein B	NA	NA	NA	NA
SQJ43926.1\|3439986_3441153_+	acriflavin resistance protein B	NA	NA	NA	NA
SQJ43927.1\|3441650_3442025_+	Hha toxicity attenuator	NA	NA	NA	NA
SQJ43928.1\|3442052_3442271_+	hemolysin expression modulating protein	NA	NA	NA	NA
SQJ43929.1\|3442449_3443001_+	maltose O-acetyltransferase	NA	NA	NA	NA
SQJ43930.1\|3443114_3443585_+	Putative inner membrane protein	NA	NA	NA	NA
SQJ43931.1\|3443785_3444046_-	50S ribosomal protein L31	NA	NA	NA	NA
SQJ43932.1\|3444269_3445820_+	Uncharacterized protein ylaB	NA	NA	NA	NA
SQJ43933.1\|3446128_3446302_+	methylated-DNA methyltransferase	NA	NA	NA	NA
SQJ43934.1\|3446331_3447039_-	lipoprotein	NA	NA	NA	NA
SQJ43937.1\|3447253_3448114_+	acyl-CoA thioesterase II	NA	NA	NA	NA
SQJ43938.1\|3448213_3449500_-	ammonium transporter	NA	NA	NA	NA
SQJ43940.1\|3449531_3449870_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
SQJ43941.1\|3449976_3451863_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	9.8e-39	26.7
SQJ43942.1\|3451855_3453628_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	6.1e-51	29.8
SQJ43943.1\|3453668_3453809_-	transcriptional regulator	NA	NA	NA	NA
SQJ43944.1\|3453808_3454126_-	putative transcriptional regulator	NA	NA	NA	NA
SQJ43945.1\|3454238_3455294_+	lyase	NA	NA	NA	NA
SQJ43946.1\|3455386_3456160_-	HMP-PP phosphatase	NA	NA	NA	NA
SQJ43947.1\|3456260_3457961_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQJ43948.1\|3458025_3458721_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.7e-87	68.0
SQJ43956.1\|3458826_3459225_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
SQJ43959.1\|3459328_3459703_-	competence protein ComEA	NA	NA	NA	NA
SQJ43960.1\|3459852_3461724_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
SQJ43991.1\|3462012_3462285_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.9e-20	58.4
SQJ44010.1\|3462493_3464848_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	7.2e-225	52.5
SQJ44011.1\|3465033_3466305_-\|protease	ATP-dependent clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.5e-131	56.5
SQJ44012.1\|3466556_3467180_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9

DBSCAN-SWA_6

3786841 : 3806542

Chrysochromulina_ericina_virus(50.0%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ44857.1\|3786841_3787132_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQJ44858.1\|3787201_3787492_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQJ44859.1\|3787561_3787852_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQJ44860.1\|3787921_3788212_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQJ44861.1\|3788281_3788572_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
SQJ44862.1\|3788574_3788925_-	VgrG protein	NA	NA	NA	NA
SQJ44863.1\|3789012_3789882_-	VgrG protein	NA	NA	NA	NA
SQJ44864.1\|3789892_3790354_-	VgrG protein	NA	NA	NA	NA
SQJ44865.1\|3790758_3790938_+	aromatic amino acid transporter	NA	NA	NA	NA
SQJ44866.1\|3790965_3792129_+	aromatic amino acid transporter	NA	NA	NA	NA
SQJ44867.1\|3792292_3793699_+	symporter	NA	NA	NA	NA
SQJ44868.1\|3793698_3794649_+	glycosyl hydrolase	NA	NA	NA	NA
SQJ44869.1\|3794741_3795596_-	AmpE protein	NA	NA	NA	NA
SQJ44870.1\|3795592_3796156_-	anhydro-N-acetylmuramyl-tripeptide amidase AmpD	A0A1W6DX33	Sphingobium_phage	2.6e-11	30.0
SQJ44871.1\|3796243_3796921_+	quinolinate phosphoribosyltransferase	NA	NA	NA	NA
SQJ44872.1\|3796941_3797136_+	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA
SQJ44873.1\|3797357_3797795_+	prepilin peptidase dependent protein D	NA	NA	NA	NA
SQJ44874.1\|3797804_3798464_+	protein transport protein HofB	NA	NA	NA	NA
SQJ44875.1\|3798460_3799036_+	protein transport protein HofB	NA	NA	NA	NA
SQJ44876.1\|3799177_3800290_+	type IV pilin biogenesis protein	NA	NA	NA	NA
SQJ44877.1\|3800410_3800812_-	GMP reductase	A0A0N9Q9A5	Chrysochromulina_ericina_virus	2.5e-37	56.8
SQJ44878.1\|3800808_3801453_-	GMP reductase	A0A0N9Q9A5	Chrysochromulina_ericina_virus	4.6e-49	53.2
SQJ44879.1\|3801678_3802299_+	Dephospho-CoA kinase	NA	NA	NA	NA
SQJ44880.1\|3802298_3803042_+	Protein of uncharacterised function (DUF1342)	NA	NA	NA	NA
SQJ44881.1\|3803051_3803243_+	zinc-binding protein	NA	NA	NA	NA
SQJ44882.1\|3803239_3804163_-	LysR family transcriptional regulator	NA	NA	NA	NA
SQJ44883.1\|3804266_3805256_+	Aldo-keto reductase family 1 member C1 homolog 20 -alpha-hydroxysteroid dehydrogenase; 20-alpha-HSD;Dihydrodiol dehydrogenase 1; DD-1; DD1	NA	NA	NA	NA
SQJ44884.1\|3805336_3806542_-\|transposase	transposase InsQ for insertion sequence element IS609	O80301	Enterobacteria_phage	2.1e-167	88.3

DBSCAN-SWA_7

4332791 : 4375592

Burkholderia_phage(44.44%)

plate,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQJ46026.1\|4332791_4333790_-\|tRNA	tRNA dihydrouridine synthase A	NA	NA	NA	NA
SQJ46032.1\|4333877_4335188_-	conjugative transfer protein	NA	NA	NA	NA
SQJ46034.1\|4335434_4335950_+	zinc uptake regulation protein	NA	NA	NA	NA
SQJ46059.1\|4336048_4336261_-	stress-response protein	NA	NA	NA	NA
SQJ46060.1\|4336279_4336408_-	putative cytoplasmic protein	NA	NA	NA	NA
SQJ46061.1\|4336389_4337715_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA
SQJ46062.1\|4337893_4338502_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
SQJ46063.1\|4338610_4338979_-	diacylglycerol kinase	NA	NA	NA	NA
SQJ46064.1\|4339149_4340334_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQJ46065.1\|4340357_4341569_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQJ46066.1\|4341679_4342552_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
SQJ46067.1\|4342565_4343063_-	chorismate lyase	NA	NA	NA	NA
SQJ46068.1\|4343243_4344161_-	maltose operon periplasmic protein	NA	NA	NA	NA
SQJ46069.1\|4344324_4345683_-	maltoporin	NA	NA	NA	NA
SQJ46070.1\|4345770_4346880_-	maltose/maltodextrin transport ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
SQJ46071.1\|4347240_4348431_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
SQJ46072.1\|4348617_4350162_+	maltose transport inner membrane protein	NA	NA	NA	NA
SQJ46073.1\|4350176_4351067_+	maltose transport inner membrane protein	NA	NA	NA	NA
SQJ46074.1\|4351410_4352886_+	D-xylose transporter XylE	NA	NA	NA	NA
SQJ46075.1\|4352931_4353342_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
SQJ46076.1\|4353483_4355580_-	lipoprotein	NA	NA	NA	NA
SQJ46079.1\|4355579_4356317_-	putative lipoprotein	NA	NA	NA	NA
SQJ46081.1\|4356313_4356952_-	outer membrane lipoprotein	NA	NA	NA	NA
SQJ46083.1\|4357015_4357261_-	YjbE secreted protein	NA	NA	NA	NA
SQJ46087.1\|4357701_4359351_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA
SQJ46091.1\|4359739_4361089_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA
SQJ46096.1\|4361294_4361570_-	DNA-binding protein	NA	NA	NA	NA
SQJ46098.1\|4362145_4362433_+	membrane protein	Q6QIC8	Burkholderia_phage	1.8e-16	49.1
SQJ46101.1\|4362468_4363041_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	9.1e-57	57.8
SQJ46104.1\|4363053_4363368_+	membrane protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
SQJ46105.1\|4363527_4363983_+	putative cytoplasmic protein	NA	NA	NA	NA
SQJ46106.1\|4363979_4364177_+	gp12	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
SQJ46110.1\|4364166_4365582_+\|tail	tail protein	A4JWK5	Burkholderia_virus	2.4e-183	69.3
SQJ46112.1\|4365581_4366106_+\|tail	tail protein	Q6QIA9	Burkholderia_phage	5.2e-67	68.4
SQJ46114.1\|4366157_4366475_+	Uncharacterised protein	NA	NA	NA	NA
SQJ46116.1\|4366656_4368942_+\|tail	tail protein	A4JWL0	Burkholderia_virus	2.2e-69	29.0
SQJ46117.1\|4368941_4369895_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	9.3e-38	52.3
SQJ46118.1\|4369894_4370104_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
SQJ46123.1\|4370091_4371132_+	gp21	A4JWL3	Burkholderia_virus	3.9e-74	45.6
SQJ46125.1\|4371141_4371864_+\|plate	baseplate protein	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
SQJ46134.1\|4371961_4372321_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.4e-34	64.2
SQJ46135.1\|4372311_4373025_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	4.2e-67	62.4
SQJ46137.1\|4372979_4373426_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	6.7e-23	42.9
SQJ46139.1\|4373418_4374051_+\|tail	tail fiber protein	Q6QI98	Burkholderia_phage	2.1e-22	54.9
SQJ46164.1\|4374053_4375592_+\|tail	tail protein	A0A0M3ULH6	Salmonella_phage	1.8e-51	42.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483495

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection