CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR031521	Streptococcus pyogenes strain S119 genome assembly, chromosome: 1	3 crisprs	DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,cas3,DEDDh,csa3	0	11	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR031521_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR031521_1

819644-819877

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	PILER-CR
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CRT

3 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LR031521_1

>merge|LR031521|1|819644-819877|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACGGGTGGTTGGCTGACGCATCGCAATATTAAGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACAGGAATATCCGCAATAATTAATTGCGCTCTGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACTAAATTTGTTTAGCAGGTAAACCGTGCTTTGTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

>LR031521|1|1|819644-819811|PILER-CR
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	GGGTGGTTGGCTGACGCATCGCAATATTAA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	AGGAATATCCGCAATAATTAATTGCGCTCT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC

>LR031521|1|1|819644-819877|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	GGGTGGTTGGCTGACGCATCGCAATATTAA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	AGGAATATCCGCAATAATTAATTGCGCTCT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TAAATTTGTTTAGCAGGTAAACCGTGCTTT
GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

>LR031521|1|1|819644-819877|CRT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	GGGTGGTTGGCTGACGCATCGCAATATTAA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	AGGAATATCCGCAATAATTAATTGCGCTCT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TAAATTTGTTTAGCAGGTAAACCGTGCTTT
GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

Protein	Signature genes	Signature genes Name	Protein_function
LR031521.1\|VDC39068.1\|812463_813096_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
LR031521.1\|VDC39067.1\|811699_812464_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
LR031521.1\|VDC39078.1\|824224_825244_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
LR031521.1\|VDC39066.1\|810947_811700_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|226401
LR031521.1\|VDC39074.1\|820250_820397_+\|nucleoside-diphosphate-kinase,-partial	unknown	unknown	gnl\|CDD\|179085
LR031521.1\|VDC39082.1\|827208_828036_+\|PTS-mannose-transporter-subunit-IID	unknown	unknown	gnl\|CDD\|226239
LR031521.1\|VDC39070.1\|817681_818551_+\|subtype-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LR031521.1\|VDC39063.1\|807614_808970_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
LR031521.1\|VDC39071.1\|818547_818889_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LR031521.1\|VDC39069.1\|813575_817682_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LR031521.1\|VDC39072.1\|818878_819541_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
LR031521.1\|VDC39081.1\|826402_827212_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226238
LR031521.1\|VDC39075.1\|820520_822353_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
LR031521.1\|VDC39080.1\|825894_826386_+\|PTS-sorbose-transporter-subunit-IIPTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB-B	unknown	unknown	gnl\|CDD\|225976
LR031521.1\|VDC39064.1\|809103_809745_+\|hypothetical-protein	unknown	unknown	unknown
LR031521.1\|VDC39077.1\|823672_824110_+\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|234692
LR031521.1\|VDC39073.1\|819989_820187_+\|nucleoside-diphosphate-kinase,-partial	unknown	unknown	gnl\|CDD\|179085
LR031521.1\|VDC39079.1\|825450_825876_+\|PTS-mannose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
LR031521.1\|VDC39076.1\|822605_823487_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366278
LR031521.1\|VDC39065.1\|809807_810938_+\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309

Protein	Function_ID	Function_description	E-value
LR031521.1\|VDC39068.1\|812463_813096_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.42094e-87
LR031521.1\|VDC39067.1\|811699_812464_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.04224e-129
LR031521.1\|VDC39078.1\|824224_825244_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	4.73129e-105
LR031521.1\|VDC39066.1\|810947_811700_+\|acyl-ACP-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	6.71769e-110
LR031521.1\|VDC39074.1\|820250_820397_+\|nucleoside-diphosphate-kinase,-partial	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	5.48184e-14
LR031521.1\|VDC39082.1\|827208_828036_+\|PTS-mannose-transporter-subunit-IID	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
LR031521.1\|VDC39070.1\|817681_818551_+\|subtype-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.48912e-131
LR031521.1\|VDC39063.1\|807614_808970_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
LR031521.1\|VDC39071.1\|818547_818889_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.79e-58
LR031521.1\|VDC39069.1\|813575_817682_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LR031521.1\|VDC39072.1\|818878_819541_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.48365e-121
LR031521.1\|VDC39081.1\|826402_827212_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
LR031521.1\|VDC39075.1\|820520_822353_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LR031521.1\|VDC39080.1\|825894_826386_+\|PTS-sorbose-transporter-subunit-IIPTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB-B	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.00329e-54
LR031521.1\|VDC39077.1\|823672_824110_+\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.70819e-84
LR031521.1\|VDC39073.1\|819989_820187_+\|nucleoside-diphosphate-kinase,-partial	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	3.61623e-06
LR031521.1\|VDC39079.1\|825450_825876_+\|PTS-mannose-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
LR031521.1\|VDC39076.1\|822605_823487_+\|hypothetical-protein	gnl\|CDD\|366278	pfam00746, Gram_pos_anchor, LPXTG cell wall anchor motif.	9.44614e-08
LR031521.1\|VDC39065.1\|809807_810938_+\|coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0

>LR031521.1|VDC39072.1|818878_819541_+|type-II-A-CRISPR-associated-protein-Csn2
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYQYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>LR031521.1|VDC39071.1|818547_818889_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>LR031521.1|VDC39070.1|817681_818551_+|subtype-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>LR031521.1|VDC39069.1|813575_817682_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD
>LR031521.1|VDC39068.1|812463_813096_+|TIGR01906-family-membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDSVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>LR031521.1|VDC39067.1|811699_812464_+|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHIETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>LR031521.1|VDC39066.1|810947_811700_+|acyl-ACP-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCEFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>LR031521.1|VDC39065.1|809807_810938_+|coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFDSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>LR031521.1|VDC39064.1|809103_809745_+|hypothetical-protein
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTPKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQMLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>LR031521.1|VDC39063.1|807614_808970_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTRPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>LR031521.1|VDC39073.1|819989_820187_+|nucleoside-diphosphate-kinase,-partial
MEQTFFMIKPYGVKQGEVVGEVLRWIERLRFTFKRFEPRQASSKYLAKHDEALVINLLILNLKLT
>LR031521.1|VDC39074.1|820250_820397_+|nucleoside-diphosphate-kinase,-partial
MMRVTNPKDALCGTIRENFAQAPGDDGGIFNMVHGSHSRDSARREIAL
>LR031521.1|VDC39075.1|820520_822353_+|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>LR031521.1|VDC39076.1|822605_823487_+|hypothetical-protein
MLTFGGASAVKAEENEKVREQEKLIQQLSEKLVEINDLQTLNGDKESIQSLVDYLTRRGKLEEEWMEYLNSGIQRKLFVGPKGPAGEKGEQGPTGKQGERGETGPAGPRGDKGETGDKGAQGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGQPGKPAPKTPEVPQNPDTAPHTPKTPRIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>LR031521.1|VDC39077.1|823672_824110_+|peptide-methionine-(R)-S-oxide-reductase
METSDELKQRIGDLSYEVTQHAATESPFTGEYDNFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>LR031521.1|VDC39078.1|824224_825244_+|putative-sulfate-exporter-family-transporter
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGLQKWLRLDVNTATLVGVGSSICGGSAVAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDALHHSNTLDGATIVKLTRTLAILPITLGLSLYRAKKEHDIVTEENFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHYLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>LR031521.1|VDC39079.1|825450_825876_+|PTS-mannose-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>LR031521.1|VDC39080.1|825894_826386_+|PTS-sorbose-transporter-subunit-IIPTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB-B
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>LR031521.1|VDC39081.1|826402_827212_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>LR031521.1|VDC39082.1|827208_828036_+|PTS-mannose-transporter-subunit-IID
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC

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Crispr_ID: LR031521_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR031521_2

1014108-1014209

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR031521_2

>merge|LR031521|2|1014108-1014209|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>LR031521|2|2|1014108-1014209|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
LR031521.1\|VDC39282.1\|1021331_1022030_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
LR031521.1\|VDC39277.1\|1014232_1014790_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LR031521.1\|VDC39267.1\|1001825_1002074_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
LR031521.1\|VDC39276.1\|1012242_1014057_-\|glutamine--fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LR031521.1\|VDC39283.1\|1022039_1022825_+\|hypothetical-protein	unknown	unknown	unknown
LR031521.1\|VDC39281.1\|1020960_1021332_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LR031521.1\|VDC39278.1\|1015007_1016510_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LR031521.1\|VDC39272.1\|1009473_1010310_-\|glutamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LR031521.1\|VDC39275.1\|1011711_1012047_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225380
LR031521.1\|VDC39270.1\|1006726_1007962_+\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
LR031521.1\|VDC39269.1\|1005284_1006607_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
LR031521.1\|VDC39279.1\|1016572_1017586_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
LR031521.1\|VDC39280.1\|1017665_1020776_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LR031521.1\|VDC39285.1\|1024156_1024345_-\|hypothetical-protein	unknown	unknown	unknown
LR031521.1\|VDC39274.1\|1010964_1011606_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LR031521.1\|VDC39273.1\|1010325_1010955_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LR031521.1\|VDC39271.1\|1008330_1009104_-\|CAMP-factor	unknown	unknown	gnl\|CDD\|369335
LR031521.1\|VDC39286.1\|1024564_1025320_+\|exotoxin-type-A-precursor-SpeA	unknown	unknown	gnl\|CDD\|280949
LR031521.1\|VDC39284.1\|1022951_1023566_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
LR031521.1\|VDC39268.1\|1002437_1004756_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429

Protein	Function_ID	Function_description	E-value
LR031521.1\|VDC39282.1\|1021331_1022030_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
LR031521.1\|VDC39277.1\|1014232_1014790_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
LR031521.1\|VDC39267.1\|1001825_1002074_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.81897e-13
LR031521.1\|VDC39276.1\|1012242_1014057_-\|glutamine--fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LR031521.1\|VDC39281.1\|1020960_1021332_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.6897e-48
LR031521.1\|VDC39278.1\|1015007_1016510_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LR031521.1\|VDC39272.1\|1009473_1010310_-\|glutamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.19305e-109
LR031521.1\|VDC39275.1\|1011711_1012047_-\|hypothetical-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
LR031521.1\|VDC39270.1\|1006726_1007962_+\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.02963e-95
LR031521.1\|VDC39269.1\|1005284_1006607_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LR031521.1\|VDC39279.1\|1016572_1017586_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
LR031521.1\|VDC39280.1\|1017665_1020776_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LR031521.1\|VDC39274.1\|1010964_1011606_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
LR031521.1\|VDC39273.1\|1010325_1010955_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.89978e-111
LR031521.1\|VDC39271.1\|1008330_1009104_-\|CAMP-factor	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	9.547e-99
LR031521.1\|VDC39286.1\|1024564_1025320_+\|exotoxin-type-A-precursor-SpeA	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	1.52086e-22
LR031521.1\|VDC39284.1\|1022951_1023566_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.46451e-31
LR031521.1\|VDC39268.1\|1002437_1004756_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0

>LR031521.1|VDC39276.1|1012242_1014057_-|glutamine--fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKSLSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLAAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LR031521.1|VDC39275.1|1011711_1012047_-|hypothetical-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LR031521.1|VDC39274.1|1010964_1011606_-|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LR031521.1|VDC39273.1|1010325_1010955_-|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LR031521.1|VDC39272.1|1009473_1010310_-|glutamine-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGRCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQDKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LR031521.1|VDC39271.1|1008330_1009104_-|CAMP-factor
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALKS
>LR031521.1|VDC39270.1|1006726_1007962_+|cation-transporter
MTQDPIANLKLARKGPIVSIIVYLSLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQRTSIWRRHESWSLLFHQITPIAKKQLHHTHYRIVKM
>LR031521.1|VDC39269.1|1005284_1006607_+|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSHLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LR031521.1|VDC39268.1|1002437_1004756_-|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LR031521.1|VDC39267.1|1001825_1002074_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLSKTNN
>LR031521.1|VDC39277.1|1014232_1014790_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LR031521.1|VDC39278.1|1015007_1016510_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LR031521.1|VDC39279.1|1016572_1017586_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKDGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LR031521.1|VDC39280.1|1017665_1020776_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEIEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYFCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTAFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDALTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDITAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSVTEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LR031521.1|VDC39281.1|1020960_1021332_+|GntR-family-transcriptional-regulator
MSWKFEEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LR031521.1|VDC39282.1|1021331_1022030_+|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LR031521.1|VDC39283.1|1022039_1022825_+|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGWEGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LR031521.1|VDC39284.1|1022951_1023566_-|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIALFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LR031521.1|VDC39285.1|1024156_1024345_-|hypothetical-protein
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPHEKVRDDEVVTVERVEEVMVELDYIK
>LR031521.1|VDC39286.1|1024564_1025320_+|exotoxin-type-A-precursor-SpeA
MENNKKVLKKMVFFVLVTFLGLTISQEVFAQQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKTELKNQEMATLFKDKNVDIYSVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFDIETNKKMVTAQELDYKVRKYLTDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK

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Crispr_ID: LR031521_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR031521_4

1279963-1280257

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRISPRCasFinder
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRT
TTTCAATCCACTCACCCATGAAGGGTGAGAC	PILER-CR

4 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of LR031521_4

>merge|LR031521|4|1279963-1280257|CRISPRCasFinder,CRT,PILER-CR
CTTTCAATCCACTCACCCATGAAGGGTGAGACGAGTTTACTCGCTCAAATCAAGGTATGCGGACAATTTCAATCCACTCACCCATGAAGGGTGAGACGCTGTGACATTGCGGGATGTAATCAAAGTAAAAAATTTCAATCCACTCACCCATGAAGGGTGAGACTAAAGCAAACCTAGCAGAAGCAGAAAATGACTTATTTCAATCCACTCACCCATGAAGGGTGAGACCTGATGTAATTGGTGATTTTCGTGATATGCTTTTTATTTCGATCCACTCACCCATGAAGGGTGAGAC

>LR031521|4|4|1279963-1280257|CRISPRCasFinder
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	GAGTTTACTCGCTCAAATCAAGGTATGCGGACA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTGTGACATTGCGGGATGTAATCAAAGTAAAAA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TAAAGCAAACCTAGCAGAAGCAGAAAATGACTT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CTGATGTAATTGGTGATTTTCGTGATATGCTTTTT
ATTTCGATCCACTCACCCATGAAGGGTGAGAC

>LR031521|4|2|1279963-1280257|CRT
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	GAGTTTACTCGCTCAAATCAAGGTATGCGGACA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTGTGACATTGCGGGATGTAATCAAAGTAAAAA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TAAAGCAAACCTAGCAGAAGCAGAAAATGACTT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CTGATGTAATTGGTGATTTTCGTGATATGCTTTTT
ATTTCGATCCACTCACCCATGAAGGGTGAGAC

>LR031521|4|2|1279964-1280257|PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GAGTTTACTCGCTCAAATCAAGGTATGCGGACAA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTGTGACATTGCGGGATGTAATCAAAGTAAAAAA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	TAAAGCAAACCTAGCAGAAGCAGAAAATGACTTA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	CTGATGTAATTGGTGATTTTCGTGATATGCTTTTTA
TTTCGATCCACTCACCCATGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
LR031521.1\|VDC39571.1\|1273597_1274677_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225197
LR031521.1\|VDC39583.1\|1285155_1285884_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
LR031521.1\|VDC39567.1\|1269897_1271133_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
LR031521.1\|VDC39572.1\|1274749_1276483_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
LR031521.1\|VDC39569.1\|1272228_1272702_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
LR031521.1\|VDC39584.1\|1286016_1288425_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LR031521.1\|VDC39581.1\|1283260_1285156_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187773
LR031521.1\|VDC39574.1\|1277307_1278414_-\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|184456
LR031521.1\|VDC39570.1\|1272867_1273584_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225917
LR031521.1\|VDC39575.1\|1278456_1279080_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
LR031521.1\|VDC39587.1\|1291788_1291968_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
LR031521.1\|VDC39568.1\|1271406_1272087_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
LR031521.1\|VDC39576.1\|1279092_1279803_-\|cytochrome-C-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|223856
LR031521.1\|VDC39577.1\|1280405_1280699_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
LR031521.1\|VDC39579.1\|1281731_1282406_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
LR031521.1\|VDC39585.1\|1288578_1291227_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
LR031521.1\|VDC39578.1\|1280709_1281735_-\|subtype-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LR031521.1\|VDC39573.1\|1276479_1277220_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|227095
LR031521.1\|VDC39586.1\|1291228_1291792_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379082
LR031521.1\|VDC39580.1\|1282407_1283256_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175

Protein	Function_ID	Function_description	E-value
LR031521.1\|VDC39571.1\|1273597_1274677_-\|hypothetical-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	3.06295e-36
LR031521.1\|VDC39583.1\|1285155_1285884_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.32713e-117
LR031521.1\|VDC39567.1\|1269897_1271133_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
LR031521.1\|VDC39572.1\|1274749_1276483_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.09335e-64
LR031521.1\|VDC39569.1\|1272228_1272702_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.68589e-66
LR031521.1\|VDC39584.1\|1286016_1288425_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.50918e-161
LR031521.1\|VDC39581.1\|1283260_1285156_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187773	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-C subtype; also known as Csd1 family.	0
LR031521.1\|VDC39574.1\|1277307_1278414_-\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	3.52722e-163
LR031521.1\|VDC39570.1\|1272867_1273584_-\|hypothetical-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	7.09856e-107
LR031521.1\|VDC39575.1\|1278456_1279080_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.89498e-35
LR031521.1\|VDC39587.1\|1291788_1291968_-\|N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	7.186e-12
LR031521.1\|VDC39568.1\|1271406_1272087_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40
LR031521.1\|VDC39576.1\|1279092_1279803_-\|cytochrome-C-biogenesis-protein-CcdA	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.97047e-42
LR031521.1\|VDC39577.1\|1280405_1280699_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
LR031521.1\|VDC39579.1\|1281731_1282406_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.18604e-43
LR031521.1\|VDC39585.1\|1288578_1291227_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
LR031521.1\|VDC39578.1\|1280709_1281735_-\|subtype-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
LR031521.1\|VDC39573.1\|1276479_1277220_-\|DNA-binding-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	7.39476e-84
LR031521.1\|VDC39586.1\|1291228_1291792_-\|hypothetical-protein	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00400512
LR031521.1\|VDC39580.1\|1282407_1283256_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	9.90819e-161

>LR031521.1|VDC39576.1|1279092_1279803_-|cytochrome-C-biogenesis-protein-CcdA
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LR031521.1|VDC39575.1|1278456_1279080_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LR031521.1|VDC39574.1|1277307_1278414_-|peptide-methionine-(R)-S-oxide-reductase
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVAYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKEKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKSDMEAKGYGYLLSSVE
>LR031521.1|VDC39573.1|1276479_1277220_-|DNA-binding-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>LR031521.1|VDC39572.1|1274749_1276483_-|sensor-histidine-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPILTPARQLSLSSKKEWVVSVTQEVVDRAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATVLVLRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>LR031521.1|VDC39571.1|1273597_1274677_-|hypothetical-protein
MSLATDYFSRQTPIVEKLMAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEATPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKAFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKKHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>LR031521.1|VDC39570.1|1272867_1273584_-|hypothetical-protein
MVEFVADQSFWELFPGAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPAGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALKFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>LR031521.1|VDC39569.1|1272228_1272702_+|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>LR031521.1|VDC39568.1|1271406_1272087_-|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>LR031521.1|VDC39567.1|1269897_1271133_-|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>LR031521.1|VDC39577.1|1280405_1280699_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>LR031521.1|VDC39578.1|1280709_1281735_-|subtype-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSSALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>LR031521.1|VDC39579.1|1281731_1282406_-|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>LR031521.1|VDC39580.1|1282407_1283256_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>LR031521.1|VDC39581.1|1283260_1285156_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQIQYDSFHKQLNNWIDYCEEGDVKKFLTFVQQFILKPEFLTLILDSLIGPDYQHNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMLKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEEDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>LR031521.1|VDC39583.1|1285155_1285884_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>LR031521.1|VDC39584.1|1286016_1288425_-|CRISPR-associated-helicase/endonuclease-Cas3
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>LR031521.1|VDC39585.1|1288578_1291227_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDDWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFNSNINYIKCFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>LR031521.1|VDC39586.1|1291228_1291792_-|hypothetical-protein
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTQLTAAETAQLIIQKMTHIKEN
>LR031521.1|VDC39587.1|1291788_1291968_-|N-acetyltransferase
MHKIELGCYDYNKQSQAVARKLGFTLEANARDRKDVQGRRCGDMRFGLLRSEWEEQKQK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448960	Streptococcus phage Javan492, complete genome	32359-32388	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448973	Streptococcus phage Javan522, complete genome	33771-33800	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448762	Streptococcus phage Javan447, complete genome	32491-32520	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448952	Streptococcus phage Javan472, complete genome	32767-32796	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	NC_004585	Streptococcus prophage 315.2, complete genome	33089-33118	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448961	Streptococcus phage Javan494, complete genome	32293-32322	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448966	Streptococcus phage Javan508, complete genome	32944-32973	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448959	Streptococcus phage Javan488, complete genome	33632-33661	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	NC_004587	Streptococcus prophage 315.4, complete genome	32210-32239	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	33480-33509	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448778	Streptococcus phage Javan493, complete genome	33411-33440	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448977	Streptococcus phage Javan530, complete genome	32115-32144	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	NC_009819	Streptococcus phage P9, complete genome	32293-32322	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448949	Streptococcus phage Javan460, complete genome	34292-34321	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448788	Streptococcus phage Javan511, complete genome	32115-32144	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448957	Streptococcus phage Javan484, complete genome	37599-37628	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448975	Streptococcus phage Javan526, complete genome	34193-34222	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448782	Streptococcus phage Javan501, complete genome	36551-36580	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448698	Streptococcus phage Javan187, complete genome	27593-27622	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448685	Streptococcus phage Javan155, complete genome	10626-10655	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448771	Streptococcus phage Javan481, complete genome	9590-9619	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448973	Streptococcus phage Javan522, complete genome	12466-12495	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448949	Streptococcus phage Javan460, complete genome	14351-14380	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448958	Streptococcus phage Javan486, complete genome	12226-12255	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448853	Streptococcus phage Javan144, complete genome	10626-10655	0	1.0
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448782	Streptococcus phage Javan501, complete genome	15112-15141	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448796	Streptococcus phage Javan53, complete genome	8309-8338	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448798	Streptococcus phage Javan533, complete genome	3973-4002	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	NC_004585	Streptococcus prophage 315.2, complete genome	6471-6500	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448955	Streptococcus phage Javan478, complete genome	5714-5743	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448966	Streptococcus phage Javan508, complete genome	6326-6355	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448795	Streptococcus phage Javan527, complete genome	9672-9701	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	KT388093	Streptococcus phage A25, complete genome	932-961	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448772	Streptococcus phage Javan483, complete genome	6334-6363	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448793	Streptococcus phage Javan523, complete genome	5444-5473	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448783	Streptococcus phage Javan503, complete genome	3890-3919	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448967	Streptococcus phage Javan510, complete genome	3974-4003	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	KY349816	Streptococcus phage Str01, complete genome	26135-26164	0	1.0
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	NC_004588	Streptococcus prophage 315.5, complete genome	4123-4152	0	1.0
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448961	Streptococcus phage Javan494, complete genome	33452-33484	0	1.0
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448766	Streptococcus phage Javan465, complete genome	34324-34356	0	1.0
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448690	Streptococcus phage Javan169, complete genome	23669-23701	0	1.0
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448694	Streptococcus phage Javan179, complete genome	22038-22070	0	1.0
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448871	Streptococcus phage Javan196, complete genome	33347-33376	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448775	Streptococcus phage Javan489, complete genome	35155-35184	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448697	Streptococcus phage Javan185, complete genome	33347-33376	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448953	Streptococcus phage Javan474, complete genome	36876-36905	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448693	Streptococcus phage Javan177, complete genome	33347-33376	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448774	Streptococcus phage Javan487, complete genome	26086-26115	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448696	Streptococcus phage Javan183, complete genome	33347-33376	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448868	Streptococcus phage Javan188, complete genome	33348-33377	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448866	Streptococcus phage Javan184, complete genome	33347-33376	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448699	Streptococcus phage Javan189, complete genome	33347-33376	1	0.967
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448867	Streptococcus phage Javan186, complete genome	33347-33376	1	0.967
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448665	Streptococcus phage Javan1, complete genome	12998-13027	1	0.967
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448849	Streptococcus phage Javan128, complete genome	9371-9400	1	0.967
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448850	Streptococcus phage Javan132, complete genome	14196-14225	1	0.967
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448779	Streptococcus phage Javan497, complete genome	33182-33214	1	0.97
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448792	Streptococcus phage Javan521, complete genome	33433-33465	1	0.97
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	NC_004584	Streptococcus prophage 315.1, complete genome	33026-33058	1	0.97
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448962	Streptococcus phage Javan496, complete genome	24582-24614	1	0.97
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448770	Streptococcus phage Javan477, complete genome	33433-33465	1	0.97
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448978	Streptococcus phage Javan532, complete genome	32920-32952	1	0.97
LR031521_4	4.1\|1279995\|33\|LR031521\|CRISPRCasFinder,CRT	1279995-1280027	33	MK448785	Streptococcus phage Javan507, complete genome	32921-32953	1	0.97
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448955	Streptococcus phage Javan478, complete genome	24096-24128	1	0.97
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448973	Streptococcus phage Javan522, complete genome	12058-12092	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	NC_028700	Streptococcus phage T12, complete genome	12019-12053	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448778	Streptococcus phage Javan493, complete genome	12073-12107	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448686	Streptococcus phage Javan157, complete genome	14021-14055	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448949	Streptococcus phage Javan460, complete genome	13943-13977	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448958	Streptococcus phage Javan486, complete genome	11818-11852	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448950	Streptococcus phage Javan464, complete genome	12065-12099	1	0.971
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448782	Streptococcus phage Javan501, complete genome	14704-14738	1	0.971
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448961	Streptococcus phage Javan494, complete genome	33452-33485	1	0.971
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448766	Streptococcus phage Javan465, complete genome	34324-34357	1	0.971
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448690	Streptococcus phage Javan169, complete genome	23669-23702	1	0.971
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448694	Streptococcus phage Javan179, complete genome	22038-22071	1	0.971
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448955	Streptococcus phage Javan478, complete genome	24096-24129	1	0.971
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH937470	Streptococcus phage CHPC925, complete genome	30198-30227	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448769	Streptococcus phage Javan471, complete genome	8724-8753	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448972	Streptococcus phage Javan520, complete genome	9008-9037	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448763	Streptococcus phage Javan451, complete genome	10205-10234	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448684	Streptococcus phage Javan151, complete genome	8724-8753	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448679	Streptococcus phage Javan137, complete genome	8363-8392	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448777	Streptococcus phage Javan491, complete genome	9301-9330	2	0.933
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448764	Streptococcus phage Javan457, complete genome	7665-7694	2	0.933
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448960	Streptococcus phage Javan492, complete genome	13786-13819	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448762	Streptococcus phage Javan447, complete genome	13913-13946	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448791	Streptococcus phage Javan517, complete genome	12700-12733	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	NC_004587	Streptococcus prophage 315.4, complete genome	12795-12828	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	14065-14098	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448977	Streptococcus phage Javan530, complete genome	12700-12733	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448783	Streptococcus phage Javan503, complete genome	13616-13649	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448788	Streptococcus phage Javan511, complete genome	12700-12733	2	0.941
LR031521_4	4.2\|1280060\|34\|LR031521\|CRISPRCasFinder,CRT	1280060-1280093	34	MK448954	Streptococcus phage Javan476, complete genome	13389-13422	2	0.941
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448749	Streptococcus phage Javan39, complete genome	23029-23061	2	0.939
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448859	Streptococcus phage Javan170, complete genome	23306-23338	2	0.939
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448962	Streptococcus phage Javan496, complete genome	12253-12285	2	0.939
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448850	Streptococcus phage Javan132, complete genome	22898-22930	2	0.939
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448676	Streptococcus phage Javan131, complete genome	25821-25853	2	0.939
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448688	Streptococcus phage Javan161, complete genome	23264-23296	2	0.939
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448771	Streptococcus phage Javan481, complete genome	9182-9216	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK449012	Streptococcus phage Javan94, complete genome	11655-11689	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	NC_004585	Streptococcus prophage 315.2, complete genome	13820-13854	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448955	Streptococcus phage Javan478, complete genome	13318-13352	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448966	Streptococcus phage Javan508, complete genome	13675-13709	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448795	Streptococcus phage Javan527, complete genome	17680-17714	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448772	Streptococcus phage Javan483, complete genome	13690-13724	2	0.943
LR031521_4	4.4\|1280191\|35\|LR031521\|CRISPRCasFinder,CRT	1280191-1280225	35	MK448673	Streptococcus phage Javan119, complete genome	13071-13105	2	0.943
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448779	Streptococcus phage Javan497, complete genome	33182-33215	2	0.941
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448792	Streptococcus phage Javan521, complete genome	33433-33466	2	0.941
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	NC_004584	Streptococcus prophage 315.1, complete genome	33026-33059	2	0.941
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448962	Streptococcus phage Javan496, complete genome	24582-24615	2	0.941
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448770	Streptococcus phage Javan477, complete genome	33433-33466	2	0.941
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448978	Streptococcus phage Javan532, complete genome	32920-32953	2	0.941
LR031521_4	4.5\|1279995\|34\|LR031521\|PILER-CR	1279995-1280028	34	MK448785	Streptococcus phage Javan507, complete genome	32921-32954	2	0.941
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448859	Streptococcus phage Javan170, complete genome	23306-23339	2	0.941
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448850	Streptococcus phage Javan132, complete genome	22898-22931	2	0.941
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448676	Streptococcus phage Javan131, complete genome	25821-25854	2	0.941
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448688	Streptococcus phage Javan161, complete genome	23264-23297	2	0.941
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448973	Streptococcus phage Javan522, complete genome	12058-12093	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	NC_028700	Streptococcus phage T12, complete genome	12019-12054	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448778	Streptococcus phage Javan493, complete genome	12073-12108	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448686	Streptococcus phage Javan157, complete genome	14021-14056	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448949	Streptococcus phage Javan460, complete genome	13943-13978	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448958	Streptococcus phage Javan486, complete genome	11818-11853	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448950	Streptococcus phage Javan464, complete genome	12065-12100	2	0.944
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448782	Streptococcus phage Javan501, complete genome	14704-14739	2	0.944
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448972	Streptococcus phage Javan520, complete genome	27907-27936	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448763	Streptococcus phage Javan451, complete genome	27769-27798	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448944	Streptococcus phage Javan452, complete genome	35813-35842	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448766	Streptococcus phage Javan465, complete genome	33164-33193	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448941	Streptococcus phage Javan446, complete genome	35012-35041	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448773	Streptococcus phage Javan485, complete genome	28861-28890	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448958	Streptococcus phage Javan486, complete genome	32541-32570	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448777	Streptococcus phage Javan491, complete genome	27640-27669	3	0.9
LR031521_1	1.1\|819680\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819680-819709	30	MK448764	Streptococcus phage Javan457, complete genome	25382-25411	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH937504	Streptococcus phage CHPC1091, complete genome	32661-32690	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	KX879641	Streptococcus phage CHPC577, complete genome	30567-30596	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892371	Streptococcus phage SW25, complete genome	27985-28014	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892372	Streptococcus phage SW26, complete genome	27681-27710	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH937493	Streptococcus phage CHPC1041, complete genome	34619-34648	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448754	Streptococcus phage Javan411, complete genome	11626-11655	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892368	Streptococcus phage SW20, complete genome	28934-28963	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	KU678389	Streptococcus virus 9871, complete genome	29072-29101	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892350	Streptococcus phage SW16, complete genome	28272-28301	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892374	Streptococcus phage SW28, complete genome	28407-28436	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	KU678391	Streptococcus virus 9873, complete genome	29157-29186	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MK448929	Streptococcus phage Javan400, complete genome	11626-11655	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892369	Streptococcus phage SW22, complete genome	28044-28073	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	NC_031094	Streptococcus virus 9872, complete genome	29449-29478	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892370	Streptococcus phage SW23, complete genome	27821-27850	3	0.9
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	MH892365	Streptococcus phage SW17, complete genome	28403-28432	3	0.9
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448859	Streptococcus phage Javan170, complete genome	4728-4757	3	0.9
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448975	Streptococcus phage Javan526, complete genome	5729-5758	3	0.9
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448688	Streptococcus phage Javan161, complete genome	4725-4754	3	0.9
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448782	Streptococcus phage Javan501, complete genome	6068-6097	3	0.9
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MK448675	Streptococcus phage Javan129, complete genome	23801-23833	3	0.909
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448960	Streptococcus phage Javan492, complete genome	13786-13820	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448762	Streptococcus phage Javan447, complete genome	13913-13947	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448791	Streptococcus phage Javan517, complete genome	12700-12734	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	NC_004587	Streptococcus prophage 315.4, complete genome	12795-12829	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	14065-14099	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448977	Streptococcus phage Javan530, complete genome	12700-12734	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448783	Streptococcus phage Javan503, complete genome	13616-13650	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448788	Streptococcus phage Javan511, complete genome	12700-12734	3	0.914
LR031521_4	4.6\|1280060\|35\|LR031521\|PILER-CR	1280060-1280094	35	MK448954	Streptococcus phage Javan476, complete genome	13389-13423	3	0.914
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448749	Streptococcus phage Javan39, complete genome	23029-23062	3	0.912
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448962	Streptococcus phage Javan496, complete genome	12253-12286	3	0.912
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448771	Streptococcus phage Javan481, complete genome	9182-9217	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK449012	Streptococcus phage Javan94, complete genome	11655-11690	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	NC_004585	Streptococcus prophage 315.2, complete genome	13820-13855	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448955	Streptococcus phage Javan478, complete genome	13318-13353	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448966	Streptococcus phage Javan508, complete genome	13675-13710	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448795	Streptococcus phage Javan527, complete genome	17680-17715	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448772	Streptococcus phage Javan483, complete genome	13690-13725	3	0.917
LR031521_4	4.8\|1280191\|36\|LR031521\|PILER-CR	1280191-1280226	36	MK448673	Streptococcus phage Javan119, complete genome	13071-13106	3	0.917
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MK448675	Streptococcus phage Javan129, complete genome	23801-23834	4	0.882
LR031521_1	1.3\|819812\|30\|LR031521\|CRISPRCasFinder,CRT	819812-819841	30	MK448676	Streptococcus phage Javan131, complete genome	4728-4757	5	0.833
LR031521_1	1.2\|819746\|30\|LR031521\|PILER-CR,CRISPRCasFinder,CRT	819746-819775	30	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	426290-426319	7	0.767
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MT774411	CrAssphage cr273_1, complete genome	18559-18591	9	0.727
LR031521_4	4.3\|1280126\|33\|LR031521\|CRISPRCasFinder,CRT	1280126-1280158	33	MT774410	CrAssphage cr272_1, complete genome	18954-18986	9	0.727
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MT774411	CrAssphage cr273_1, complete genome	18558-18591	9	0.735
LR031521_4	4.7\|1280126\|34\|LR031521\|PILER-CR	1280126-1280159	34	MT774410	CrAssphage cr272_1, complete genome	18954-18987	9	0.735

1. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

2. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

3. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

4. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

5. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

6. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

7. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

8. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

9. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

10. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

11. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

12. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

13. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

14. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

15. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

16. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

17. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

18. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

19. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448698 (Streptococcus phage Javan187, complete genome) position: , mismatch: 0, identity: 1.0

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcgcaatattaa	Protospacer
******************************

20. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

21. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

22. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

23. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

24. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

25. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

26. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattaattgcgctct	Protospacer
******************************

27. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

28. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

29. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

30. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

31. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

32. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

33. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to KT388093 (Streptococcus phage A25, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

34. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

35. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

36. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

37. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

38. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to KY349816 (Streptococcus phage Str01, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

39. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
taaatttgtttagcaggtaaaccgtgcttt	Protospacer
******************************

40. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggtatgcggaca	Protospacer
*********************************

41. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 0, identity: 1.0

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggtatgcggaca	Protospacer
*********************************

42. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcaaacctagcagaagcagaaaatgactt	Protospacer
*********************************

43. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 0, identity: 1.0

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcaaacctagcagaagcagaaaatgactt	Protospacer
*********************************

44. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

45. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

46. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

47. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

48. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

49. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

50. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

51. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

52. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

53. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

54. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 1, identity: 0.967

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcatcacaatattaa	Protospacer
********************.*********

55. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448665 (Streptococcus phage Javan1, complete genome) position: , mismatch: 1, identity: 0.967

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatccgcaataattagttgcgctct	Protospacer
********************.*********

56. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.967

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatctgcaataattaattgcgctct	Protospacer
*********.********************

57. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 1, identity: 0.967

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggaatatctgcaataattaattgcgctct	Protospacer
*********.********************

58. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

59. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

60. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

61. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

62. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

63. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

64. spacer 4.1|1279995|33|LR031521|CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.97

gagtttactcgctcaaatcaaggtatgcggaca	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggaca	Protospacer
***********************.*********

65. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 1, identity: 0.97

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcaaacctagcagaagcagaaaacgactt	Protospacer
***************************.*****

66. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

67. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

68. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

69. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

70. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

71. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

72. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

73. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 1, identity: 0.971

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgcctttt	Protospacer
******************************.****

74. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 1, identity: 0.971

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggtatgcggacag	Protospacer
*********************************.

75. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 1, identity: 0.971

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggtatgcggacag	Protospacer
*********************************.

76. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 1, identity: 0.971

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcaaacctagcagaagcagaaaatgacttg	Protospacer
*********************************.

77. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 1, identity: 0.971

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcaaacctagcagaagcagaaaatgacttg	Protospacer
*********************************.

78. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 1, identity: 0.971

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcaaacctagcagaagcagaaaacgactta	Protospacer
***************************.******

79. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH937470 (Streptococcus phage CHPC925, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatatctgcaataattaattgcgctct	Protospacer
 ********.********************

80. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

81. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

82. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

83. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

84. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

85. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

86. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 2, identity: 0.933

aggaatatccgcaataattaattgcgctct	CRISPR spacer
aggtatatctgcaataattaattgcgctct	Protospacer
*** *****.********************

87. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

88. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

89. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

90. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

91. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

92. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

93. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

94. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

95. spacer 4.2|1280060|34|LR031521|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.941

gctgtgacattgcgggatgtaatcaaagtaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaa	Protospacer
***************.************.*****

96. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 2, identity: 0.939

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcaagcctagcagaagcagaaaacgactt	Protospacer
********.******************.*****

97. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 2, identity: 0.939

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactt	Protospacer
******.*.************************

98. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.939

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcgaacctagcagaagcagaaaacgactt	Protospacer
******.********************.*****

99. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 2, identity: 0.939

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactt	Protospacer
******.*.************************

100. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.939

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactt	Protospacer
******.*.************************

101. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.939

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactt	Protospacer
******.*.************************

102. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgcctttt	Protospacer
*************************.****.****

103. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtgattggtgattttcgtgatatgcctttt	Protospacer
*******.**********************.****

104. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgcctttt	Protospacer
*************************.****.****

105. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgcctttt	Protospacer
*************************.****.****

106. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgcctttt	Protospacer
*************************.****.****

107. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgcctttt	Protospacer
*************************.****.****

108. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgcctttt	Protospacer
*************************.****.****

109. spacer 4.4|1280191|35|LR031521|CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.943

ctgatgtaattggtgattttcgtgatatgcttttt	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccattt	Protospacer
******************************. ***

110. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

111. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

112. spacer 4.5|1279995|34|LR031521|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

113. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

114. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

115. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

116. spacer 4.5|1279995|34|LR031521|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.941

gagtttactcgctcaaatcaaggtatgcggacaa	CRISPR spacer
gagtttactcgctcaaatcaaggcatgcggacag	Protospacer
***********************.*********.

117. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 2, identity: 0.941

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactta	Protospacer
******.*.*************************

118. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 2, identity: 0.941

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactta	Protospacer
******.*.*************************

119. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.941

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactta	Protospacer
******.*.*************************

120. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.941

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcgagcctagcagaagcagaaaatgactta	Protospacer
******.*.*************************

121. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

122. spacer 4.8|1280191|36|LR031521|PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

123. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

124. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

125. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

126. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

127. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

128. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 2, identity: 0.944

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccttttg	Protospacer
******************************.****.

129. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

130. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

131. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gggtggttggctgacgcattacaatattta	Protospacer
*******************..******* *

132. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

133. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

134. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

135. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

136. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

137. spacer 1.1|819680|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 3, identity: 0.9

gggtggttggctgacgcatcgcaatattaa	CRISPR spacer
gtgtgcttggctggcgcatcgcaatattaa	Protospacer
* *** *******.****************

138. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH937504 (Streptococcus phage CHPC1091, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

139. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to KX879641 (Streptococcus phage CHPC577, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

140. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892371 (Streptococcus phage SW25, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

141. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892372 (Streptococcus phage SW26, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

142. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH937493 (Streptococcus phage CHPC1041, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

143. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448754 (Streptococcus phage Javan411, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatatctgcgataattaattgcgctct	Protospacer
 ********.**.*****************

144. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892368 (Streptococcus phage SW20, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

145. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to KU678389 (Streptococcus virus 9871, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

146. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892350 (Streptococcus phage SW16, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

147. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892374 (Streptococcus phage SW28, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

148. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to KU678391 (Streptococcus virus 9873, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

149. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MK448929 (Streptococcus phage Javan400, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatatctgcgataattaattgcgctct	Protospacer
 ********.**.*****************

150. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892369 (Streptococcus phage SW22, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

151. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to NC_031094 (Streptococcus virus 9872, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

152. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892370 (Streptococcus phage SW23, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

153. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to MH892365 (Streptococcus phage SW17, complete genome) position: , mismatch: 3, identity: 0.9

aggaatatccgcaataattaattgcgctct	CRISPR spacer
tggaatgtctgcaataattaattgcgctct	Protospacer
 *****.**.********************

154. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 3, identity: 0.9

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
caaatttgtttagcaggcaaaccgtgtttt	Protospacer
.****************.********.***

155. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 3, identity: 0.9

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
caaatttgtttagcaggcaaaccgtgtttt	Protospacer
.****************.********.***

156. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 3, identity: 0.9

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
caaatttgtttagcaggcaaaccgtgtttt	Protospacer
.****************.********.***

157. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.9

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
caaatttgtttagcaggcaaaccgtgtttt	Protospacer
.****************.********.***

158. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 3, identity: 0.909

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
caaagcaaacttagtagaagcagaaaatgactt	Protospacer
.*********.***.******************

159. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

160. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

161. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

162. spacer 4.6|1280060|35|LR031521|PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

163. spacer 4.6|1280060|35|LR031521|PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

164. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

165. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

166. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

167. spacer 4.6|1280060|35|LR031521|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 3, identity: 0.914

gctgtgacattgcgggatgtaatcaaagtaaaaaa	CRISPR spacer
gctgtgacattgcggaatgtaatcaaagcaaaaag	Protospacer
***************.************.*****.

168. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 3, identity: 0.912

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcaagcctagcagaagcagaaaacgacttg	Protospacer
********.******************.*****.

169. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 3, identity: 0.912

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
taaagcgaacctagcagaagcagaaaacgacttg	Protospacer
******.********************.*****.

170. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgccttttg	Protospacer
*************************.****.****.

171. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtgattggtgattttcgtgatatgccttttg	Protospacer
*******.**********************.****.

172. spacer 4.8|1280191|36|LR031521|PILER-CR matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgccttttg	Protospacer
*************************.****.****.

173. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgccttttg	Protospacer
*************************.****.****.

174. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgccttttg	Protospacer
*************************.****.****.

175. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgccttttg	Protospacer
*************************.****.****.

176. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgacatgccttttg	Protospacer
*************************.****.****.

177. spacer 4.8|1280191|36|LR031521|PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 3, identity: 0.917

ctgatgtaattggtgattttcgtgatatgcttttta	CRISPR spacer
ctgatgtaattggtgattttcgtgatatgccatttg	Protospacer
******************************. ***.

178. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 4, identity: 0.882

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
caaagcaaacttagtagaagcagaaaatgacttg	Protospacer
.*********.***.******************.

179. spacer 1.3|819812|30|LR031521|CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 5, identity: 0.833

taaatttgtttagcaggtaaaccgtgcttt	CRISPR spacer
caaatttgtttagcaggcaaaccgtgcaac	Protospacer
.****************.*********  .

180. spacer 1.2|819746|30|LR031521|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 7, identity: 0.767

aggaatatccgcaataattaattgcgctct	CRISPR spacer
cgttttatcctcaataattaattccgcttt	Protospacer
 *   ***** ************ ****.*

181. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 9, identity: 0.727

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
tacagcaaacccagcagaagcagatacatatac	Protospacer
** ********.************ *   *. .

182. spacer 4.3|1280126|33|LR031521|CRISPRCasFinder,CRT matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 9, identity: 0.727

taaagcaaacctagcagaagcagaaaatgactt	CRISPR spacer
tacagcaaacccagcagaagcagatacatatac	Protospacer
** ********.************ *   *. .

183. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 9, identity: 0.735

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
tacagcaaacccagcagaagcagatacatataca	Protospacer
** ********.************ *   *. .*

184. spacer 4.7|1280126|34|LR031521|PILER-CR matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 9, identity: 0.735

taaagcaaacctagcagaagcagaaaatgactta	CRISPR spacer
tacagcaaacccagcagaagcagatacatataca	Protospacer
** ********.************ *   *. .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36809 : 49122

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC38291.1\|36809_40535_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.5e-38	27.3
VDC38292.1\|40695_42150_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.8e-54	32.7
VDC38293.1\|42177_43200_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.1e-63	42.1
VDC38294.1\|43367_43922_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.2e-25	36.1
VDC38295.1\|44105_45653_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase purH	E3SNU8	Prochlorococcus_phage	8.3e-44	51.3
VDC38296.1\|45710_46835_-	amidase	F8HGP2	Streptococcus_phage	7.7e-07	28.6
VDC38297.1\|47087_48353_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
VDC38298.1\|48630_49122_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.1e-17	41.6

DBSCAN-SWA_2

157736 : 197193

Bacillus_phage(37.5%)

integrase,transposase,tRNA

attL 172245:172258|attR 181656:181669

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC38418.1\|157736_160238_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.5
VDC38420.1\|160544_161978_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
VDC38421.1\|162048_162327_+	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA
VDC38422.1\|162449_162935_+	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA
VDC38423.1\|163025_163688_+	3-keto-L-gulonate-6-phosphate decarboxylase ulaD	NA	NA	NA	NA
VDC38424.1\|163692_164556_+	L-xylulose 5-phosphate 3-epimerase	NA	NA	NA	NA
VDC38425.1\|164557_165262_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
VDC38426.1\|165586_167233_+	transcription antiterminator	NA	NA	NA	NA
VDC38427.1\|167485_168577_+	L-ascorbate-6-phosphate lactonase	NA	NA	NA	NA
VDC38428.1\|169064_170261_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.0e-30	39.2
VDC38429.1\|170276_172004_+	glycine/betaine ABC transporter permease	NA	NA	NA	NA
VDC38430.1\|172134_174777_+	DNA polymerase I	A0A142F1Q9	Bacillus_phage	4.2e-64	35.7
172245:172258	attL	NA	NA	NA	NA
VDC38431.1\|174963_175419_+	CoA-binding protein	NA	NA	NA	NA
VDC38432.1\|175470_175938_+	transcriptional repressor PerR	NA	NA	NA	NA
VDC38433.1\|176094_176394_+	hypothetical protein	NA	NA	NA	NA
VDC38434.1\|176615_177950_+	phosphoadenosine phosphosulfate sulfurtransferase	L0P6Z6	Lactobacillus_phage	6.8e-87	39.5
VDC38435.1\|177942_178473_+	nuclease	A0A220GKT8	Streptococcus_phage	7.1e-64	68.6
VDC38436.1\|178465_178675_+	hypothetical protein	NA	NA	NA	NA
VDC38437.1\|178801_178981_-\|transposase	transposase	NA	NA	NA	NA
VDC38439.1\|179056_179626_-\|integrase	integrase	A0A1P8CWQ3	Bacillus_phage	2.6e-27	39.0
VDC38440.1\|179658_179874_-\|transposase	IS3 family transposase	NA	NA	NA	NA
VDC38441.1\|180029_181340_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
VDC38442.1\|181563_182436_+	nicotinate-nucleotide diphosphorylase (carboxylating)	NA	NA	NA	NA
181656:181669	attR	NA	NA	NA	NA
VDC38443.1\|182735_183542_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.9e-64	50.4
VDC38444.1\|183562_184078_-\|transposase	transposase	NA	NA	NA	NA
VDC38445.1\|184163_185027_-	DUF975 domain-containing protein	NA	NA	NA	NA
VDC38446.1\|185245_186388_+\|tRNA	Queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.2e-86	43.9
VDC38447.1\|186604_186916_+	hypothetical protein	NA	NA	NA	NA
VDC38448.1\|186919_187459_+	BioY family transporter	NA	NA	NA	NA
VDC38449.1\|187598_188378_+	metal-dependent hydrolase	NA	NA	NA	NA
VDC38450.1\|188377_188893_+\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
VDC38451.1\|189506_190727_-	S-layer homology domain	NA	NA	NA	NA
VDC38452.1\|191138_191843_+	exotoxin type G	NA	NA	NA	NA
VDC38453.1\|192298_193648_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
VDC38454.1\|193996_195505_-	trans-acting positive regulator RivR	NA	NA	NA	NA
VDC38456.1\|196059_197193_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

337026 : 343060

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC38591.1\|337026_337662_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-65	63.4
VDC38592.1\|337679_338555_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.2e-62	43.4
VDC38593.1\|338573_338813_+	hypothetical protein	NA	NA	NA	NA
VDC38594.1\|338901_339063_+	signal peptidase-like protein	NA	NA	NA	NA
VDC38595.1\|339217_339541_+	initiation-control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
VDC38597.1\|339545_340409_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.7e-115	75.0
VDC38598.1\|340435_340828_+	hypothetical protein	NA	NA	NA	NA
VDC38599.1\|340874_341504_-	copper homeostasis protein CutC	NA	NA	NA	NA
VDC38600.1\|341802_342159_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	6.3e-40	65.8
VDC38601.1\|342232_343060_-	exodeoxyribonuclease	M1PSC0	Streptococcus_phage	1.4e-127	79.1

DBSCAN-SWA_4

351401 : 394362

Mycobacterium_phage(18.18%)

bacteriocin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC38607.1\|351401_353399_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	4.6e-87	35.0
VDC38608.1\|353893_354907_+	Ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.5e-97	53.7
VDC38609.1\|354910_355399_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	1.4e-10	36.7
VDC38610.1\|355365_357546_+	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.8e-170	43.1
VDC38611.1\|357748_358501_-	ADP-ribosyltransferase SpyA	NA	NA	NA	NA
VDC38612.1\|358494_358602_-	ADP-ribosyltransferase SpyB	NA	NA	NA	NA
VDC38613.1\|358959_359496_+	putative membrane associated protein	NA	NA	NA	NA
VDC38614.1\|359769_360021_+	hypothetical protein	NA	NA	NA	NA
VDC38615.1\|360114_360747_-	hypothetical protein	NA	NA	NA	NA
VDC38616.1\|361425_361746_+	hypothetical protein	NA	NA	NA	NA
VDC38617.1\|362058_362757_-	exotoxin SpeJ	NA	NA	NA	NA
VDC38618.1\|363004_363619_-	hypothetical protein	NA	NA	NA	NA
VDC38619.1\|363979_364216_+	DUF2829 domain-containing protein	NA	NA	NA	NA
VDC38621.1\|364208_364907_+	3-oxoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	7.1e-11	24.3
VDC38622.1\|364982_365942_+	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
VDC38623.1\|366274_367612_+	MFS transporter	NA	NA	NA	NA
VDC38625.1\|367784_369167_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	3.8e-32	36.0
VDC38626.1\|369197_369752_+	NUDIX hydrolase	NA	NA	NA	NA
VDC38627.1\|369751_370003_+	hypothetical protein	NA	NA	NA	NA
VDC38628.1\|370022_370718_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
VDC38629.1\|370868_371210_+	hypothetical protein	NA	NA	NA	NA
VDC38630.1\|371310_371958_-	metal-dependent transcriptional regulator MtsR	NA	NA	NA	NA
VDC38631.1\|372103_373036_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
VDC38632.1\|373099_373825_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.4e-17	32.6
VDC38634.1\|373825_374680_+	metal ABC transporter permease	NA	NA	NA	NA
VDC38635.1\|374827_375634_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
VDC38636.1\|375850_378256_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	3.8e-88	51.7
VDC38637.1\|378325_378679_-	DUF3397 domain-containing protein	NA	NA	NA	NA
VDC38639.1\|378922_379348_+	50S ribosomal protein L11	NA	NA	NA	NA
VDC38640.1\|379453_380143_+	50S ribosomal protein L1	NA	NA	NA	NA
VDC38641.1\|380465_381194_+	Uridylate kinase	NA	NA	NA	NA
VDC38643.1\|381222_381780_+	ribosome-recycling factor	NA	NA	NA	NA
VDC38644.1\|381888_382746_+	S1 RNA-binding protein	NA	NA	NA	NA
VDC38645.1\|382818_383328_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
VDC38646.1\|383324_383540_+	YozE family protein	NA	NA	NA	NA
VDC38647.1\|383695_384865_+	hypothetical protein	A0A0E3XB61	Gordonia_phage	5.5e-16	40.5
VDC38648.1\|385178_386951_+	oleate hydratase	NA	NA	NA	NA
VDC38650.1\|387109_388162_+	phosphate starvation protein PhoH	W8D063	Erwinia_phage	1.2e-46	50.0
VDC38651.1\|388207_388783_+	uracil-DNA glycosylase	NA	NA	NA	NA
VDC38652.1\|388941_389439_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
VDC38653.1\|389419_389827_+	diacylglycerol kinase	NA	NA	NA	NA
VDC38654.1\|389946_390843_+	GTPase Era	NA	NA	NA	NA
VDC38655.1\|390862_391339_+	NUDIX domain-containing protein	NA	NA	NA	NA
VDC38656.1\|391643_391898_-	hypothetical protein	NA	NA	NA	NA
VDC38657.1\|392295_392541_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
VDC38658.1\|392555_392738_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
VDC38659.1\|393046_393196_-\|transposase	transposase	NA	NA	NA	NA
VDC38660.1\|393192_393615_-\|transposase	transposase	NA	NA	NA	NA
VDC38661.1\|393965_394097_+\|bacteriocin	bacteriocin class II with double-glycine leader peptide	NA	NA	NA	NA
VDC38662.1\|394161_394362_+\|bacteriocin	bacteriocin leader domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_5

515514 : 570546

Temperate_phage(37.25%)

holin,capsid,terminase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC38784.1\|515514_516639_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
VDC38785.1\|516792_517806_+	peptide chain release factor 2	NA	NA	NA	NA
VDC38786.1\|517824_518517_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	1.0e-30	35.6
VDC38787.1\|518509_519439_+	ABC transporter permease	NA	NA	NA	NA
VDC38788.1\|519748_520384_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	8.0e-78	62.4
VDC38789.1\|520614_521229_+	acetoin reductase	NA	NA	NA	NA
VDC38790.1\|521528_523988_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	1.3e-203	48.1
VDC38791.1\|524322_525516_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
VDC38792.1\|525536_526883_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8
VDC38793.1\|527296_528187_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
VDC38794.1\|528183_529161_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.1e-138	74.2
VDC38795.1\|529157_530069_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.3e-105	64.7
VDC38796.1\|530245_531661_-	recombinase family protein	A5GZ62	Lactococcus_phage	2.3e-109	47.0
VDC38797.1\|531784_532150_-	hypothetical protein	Q9T1Z1	Lactococcus_phage	2.8e-19	67.2
VDC38798.1\|532176_532938_-	XRE family transcriptional regulator	X2KUB8	Streptococcus_phage	1.4e-39	40.2
VDC38799.1\|533121_533352_+	XRE family transcriptional regulator	A0A2H4J9X2	uncultured_Caudovirales_phage	2.3e-19	63.2
VDC38800.1\|533420_533558_+	hypothetical protein	NA	NA	NA	NA
VDC38802.1\|533559_533685_+	hypothetical protein	A0A097PAR2	Streptococcus_pyogenes_phage	1.5e-09	80.0
VDC38803.1\|533681_533909_+	hypothetical protein	NA	NA	NA	NA
VDC38804.1\|533908_535228_+	chromosome segregation protein SMC	A0A097BY67	Enterococcus_phage	1.1e-150	63.6
VDC38805.1\|535242_536334_+	hypothetical protein	A0A0K2CZH1	Paenibacillus_phage	1.0e-96	52.0
VDC38806.1\|536373_536796_+	hypothetical protein	M1I9V9	Streptococcus_phage	4.2e-35	59.9
VDC38807.1\|536797_537532_+	hypothetical protein	Q0R597	Streptococcus_phage	7.8e-77	61.3
VDC38808.1\|537553_538189_+	hypothetical protein	A0A097BY29	Enterococcus_phage	4.3e-31	46.7
VDC38809.1\|538188_539772_+	DEAD/DEAH box helicase	A0A097BY72	Enterococcus_phage	1.3e-233	77.4
VDC38810.1\|539781_540411_+	hypothetical protein	A0A2R4P8H7	Staphylococcus_phage	9.1e-42	43.1
VDC38811.1\|540400_542674_+	hypothetical protein	Q5YA88	Bacillus_phage	3.8e-279	64.2
VDC38812.1\|542951_543170_+	hypothetical protein	A0A1S5SEA6	Streptococcus_phage	1.3e-16	64.3
VDC38813.1\|543162_543558_+	RusA family crossover junction endodeoxyribonuclease	Q5YA86	Bacillus_phage	9.4e-45	65.6
VDC38814.1\|543554_543776_+	hypothetical protein	NA	NA	NA	NA
VDC38815.1\|543778_544051_+	hypothetical protein	A7J287	Streptococcus_phage	3.2e-20	63.3
VDC38816.1\|544053_544389_+	hypothetical protein	A0A097PAS4	Streptococcus_pyogenes_phage	4.7e-45	100.0
VDC38817.1\|544378_544567_+	hypothetical protein	NA	NA	NA	NA
VDC38818.1\|544579_544981_+	hypothetical protein	NA	NA	NA	NA
VDC38819.1\|544980_545616_+	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	1.5e-87	68.4
VDC38820.1\|545880_546318_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	3.6e-77	100.0
VDC38821.1\|546479_547646_+	adenine methyltransferase	Q708N6	Streptococcus_phage	7.9e-124	53.9
VDC38822.1\|547988_548465_+	hypothetical protein	Q938L4	Temperate_phage	4.9e-48	68.4
VDC38823.1\|548547_549759_+\|terminase	PBSX family phage terminase large subunit	Q938L3	Temperate_phage	3.7e-225	99.7
VDC38824.1\|549772_551275_+\|capsid	phage capsid protein	Q938L2	Temperate_phage	5.9e-281	99.6
VDC38825.1\|551279_552773_+\|capsid	phage capsid protein	Q938L1	Temperate_phage	2.1e-214	80.8
VDC38826.1\|552772_553000_+	hypothetical protein	NA	NA	NA	NA
VDC38827.1\|553086_553353_+	hypothetical protein	Q938K9	Temperate_phage	8.3e-37	95.5
VDC38828.1\|553478_554093_+	hypothetical protein	Q938K8	Temperate_phage	3.1e-95	95.0
VDC38829.1\|554096_554915_+\|capsid	N4-gp56 family major capsid protein	Q79S85	Temperate_phage	4.0e-146	100.0
VDC38830.1\|554968_555385_+	hypothetical protein	Q938K7	Temperate_phage	4.3e-56	99.1
VDC38831.1\|555374_555707_+	hypothetical protein	Q79S86	Temperate_phage	9.6e-59	100.0
VDC38832.1\|555706_556063_+\|capsid	capsid protein	Q79S88	Temperate_phage	4.5e-62	100.0
VDC38833.1\|556059_556458_+\|capsid	phage capsid protein	Q79S87	Temperate_phage	3.5e-71	100.0
VDC38834.1\|556457_556943_+	hypothetical protein	Q938K6	Temperate_phage	1.6e-86	100.0
VDC38835.1\|556981_557416_+	hypothetical protein	Q938K5	Temperate_phage	2.9e-71	99.3
VDC38836.1\|557419_558001_+	hypothetical protein	Q938K4	Temperate_phage	1.6e-104	98.4
VDC38837.1\|557990_561251_+	tape measure domain-containing protein	Q938K3	Temperate_phage	0.0e+00	98.6
VDC38838.1\|561247_561964_+	hypothetical protein	Q938K2	Temperate_phage	1.9e-136	99.2
VDC38839.1\|561960_564105_+	phage protein	Q938K1	Temperate_phage	0.0e+00	94.1
VDC38840.1\|564101_565223_+	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.9e-127	73.3
VDC38841.1\|565235_567149_+	hypothetical protein	Q938J9	Temperate_phage	2.7e-92	61.3
VDC38843.1\|567326_567944_+	hypothetical protein	A3F662	Streptococcus_phage	7.2e-84	93.7
VDC38844.1\|567953_568229_+	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
VDC38845.1\|568225_568453_+\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
VDC38846.1\|568568_569771_+	lysin	Q938J4	Temperate_phage	3.4e-231	95.2
VDC38847.1\|569838_570546_-	exotoxin type C	A0A097PAT7	Streptococcus_pyogenes_phage	1.4e-09	27.5

DBSCAN-SWA_6

664274 : 674877

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC38930.1\|664274_666485_-	LTA synthase family protein	W6LM83	Streptococcus_phage	2.9e-268	69.1
VDC38931.1\|666592_667756_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
VDC38932.1\|667752_668439_+	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
VDC38933.1\|668532_669699_+	chorismate synthase	A0A291AU41	Pandoravirus	1.8e-38	34.4
VDC38934.1\|669759_670101_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
VDC38935.1\|670321_671674_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-30	24.0
VDC38936.1\|671761_673030_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
VDC38937.1\|673059_673500_-	membrane protein	NA	NA	NA	NA
VDC38938.1\|673734_674877_+	cysteine desulfurase	H7BUW1	unidentified_phage	7.8e-15	31.7

DBSCAN-SWA_7

1017665 : 1065404

Streptococcus_pyogenes_phage(70.69%)

tail,terminase,integrase,portal,head,holin

attL 1023987:1024046|attR 1061943:1062038

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC39280.1\|1017665_1020776_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	3.7e-120	29.9
VDC39281.1\|1020960_1021332_+	GntR family transcriptional regulator	NA	NA	NA	NA
VDC39282.1\|1021331_1022030_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
VDC39283.1\|1022039_1022825_+	hypothetical protein	NA	NA	NA	NA
VDC39284.1\|1022951_1023566_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	1.1e-50	52.3
1023987:1024046	attL	NA	NA	NA	NA
VDC39285.1\|1024156_1024345_-	hypothetical protein	J7KIW4	Streptococcus_phage	3.4e-21	82.3
VDC39286.1\|1024564_1025320_+	exotoxin type A precursor SpeA	A0A097PAT7	Streptococcus_pyogenes_phage	1.9e-142	99.6
VDC39287.1\|1025441_1026101_-	hypothetical protein	A0A097PBF7	Streptococcus_pyogenes_phage	8.5e-123	100.0
VDC39288.1\|1026100_1026322_-	hypothetical protein	A0A097PAX7	Streptococcus_pyogenes_phage	2.5e-18	84.5
VDC39289.1\|1026331_1027105_-	hypothetical protein	A0A097PAV0	Streptococcus_pyogenes_phage	3.9e-135	100.0
VDC39290.1\|1027115_1027718_-	hypothetical protein	A0A097PAX9	Streptococcus_pyogenes_phage	7.8e-91	98.8
VDC39291.1\|1027729_1028494_-	cell wall hydrolase	A0A097PAT3	Streptococcus_pyogenes_phage	8.0e-149	98.4
VDC39292.1\|1028495_1028828_-\|holin	putative holin	A0A097PBF6	Streptococcus_pyogenes_phage	7.4e-51	99.1
VDC39293.1\|1028827_1029151_-	hypothetical protein	A0A097PAX2	Streptococcus_pyogenes_phage	7.7e-53	100.0
VDC39294.1\|1029164_1029287_-	phage protein	A0A097PAU6	Streptococcus_pyogenes_phage	4.8e-16	100.0
VDC39295.1\|1029300_1029648_-	hypothetical protein	A0A097PAX5	Streptococcus_pyogenes_phage	6.5e-58	99.1
VDC39296.1\|1029658_1031521_-	hypothetical protein	A0A097PAT0	Streptococcus_pyogenes_phage	0.0e+00	99.4
VDC39297.1\|1031525_1034966_-	hypothetical protein	A0A097PBF5	Streptococcus_pyogenes_phage	0.0e+00	98.7
VDC39298.1\|1034966_1036451_-	hypothetical protein	A0A097PAW9	Streptococcus_pyogenes_phage	4.3e-292	99.8
VDC39299.1\|1036451_1038257_-\|tail	tail protein	A0A097PAU2	Streptococcus_pyogenes_phage	8.8e-263	99.7
VDC39300.1\|1038249_1038708_-	hypothetical protein	A0A097PAX1	Streptococcus_pyogenes_phage	2.3e-82	100.0
VDC39301.1\|1038680_1038998_-	hypothetical protein	A0A097PAS6	Streptococcus_pyogenes_phage	4.9e-52	100.0
VDC39302.1\|1039010_1039517_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	2.6e-79	100.0
VDC39303.1\|1039528_1039939_-	DUF5072 domain-containing protein	A0A097PAW5	Streptococcus_pyogenes_phage	1.4e-70	100.0
VDC39304.1\|1039940_1040324_-	hypothetical protein	A0A097PAT9	Streptococcus_pyogenes_phage	1.7e-59	100.0
VDC39305.1\|1040332_1040644_-	hypothetical protein	A0A097PAW7	Streptococcus_pyogenes_phage	1.0e-49	98.1
VDC39306.1\|1040640_1040985_-	hypothetical protein	A0A097PAS2	Streptococcus_pyogenes_phage	1.1e-54	100.0
VDC39307.1\|1040998_1041292_-	hypothetical protein	A0A097PBF3	Streptococcus_pyogenes_phage	2.0e-47	100.0
VDC39308.1\|1041304_1042195_-	hypothetical protein	A0A097PAW2	Streptococcus_pyogenes_phage	8.6e-86	99.4
VDC39309.1\|1042213_1042783_-	DUF4355 domain-containing protein	A0A097PAW3	Streptococcus_pyogenes_phage	8.5e-71	98.4
VDC39310.1\|1042891_1043026_-	hypothetical protein	NA	NA	NA	NA
VDC39311.1\|1043027_1043297_-	hypothetical protein	Q938K9	Temperate_phage	5.6e-33	85.2
VDC39312.1\|1043303_1044212_-\|head	phage head morphogenesis protein	A0A097PBF2	Streptococcus_pyogenes_phage	6.7e-86	98.2
VDC39313.1\|1044180_1045506_-\|portal	phage portal protein	A0A097PAT2	Streptococcus_pyogenes_phage	1.6e-237	97.2
VDC39314.1\|1045505_1046780_-\|terminase	PBSX family phage terminase large subunit	A0A097PAV9	Streptococcus_pyogenes_phage	1.1e-251	100.0
VDC39315.1\|1046769_1047150_-	hypothetical protein	A0A097PAR5	Streptococcus_pyogenes_phage	1.0e-64	100.0
VDC39316.1\|1047759_1048194_-	ArpU family transcriptional regulator	J7KDQ1	Streptococcus_phage	2.2e-71	94.4
VDC39317.1\|1048479_1048746_-	hypothetical protein	NA	NA	NA	NA
VDC39318.1\|1048742_1049267_-	DUF1642 domain-containing protein	J7KK91	Streptococcus_phage	2.3e-38	51.1
VDC39319.1\|1049269_1049902_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.3e-85	68.6
VDC39320.1\|1050184_1050355_-	hypothetical phage protein	Q938M0	Temperate_phage	7.9e-09	87.1
VDC39321.1\|1050351_1050588_-	DUF3310 domain-containing protein	A0A097PAQ7	Streptococcus_pyogenes_phage	2.4e-40	100.0
VDC39322.1\|1050587_1050719_-	hypothetical protein	A0A097PBE9	Streptococcus_pyogenes_phage	4.7e-17	100.0
VDC39323.1\|1050829_1051186_-	hypothetical protein	A0A097PAU4	Streptococcus_pyogenes_phage	2.9e-61	100.0
VDC39324.1\|1051182_1051623_-	RusA family crossover junction endodeoxyribonuclease	A0A097PAS0	Streptococcus_pyogenes_phage	4.5e-80	97.9
VDC39325.1\|1051831_1052257_-	single-stranded DNA-binding protein	A0A097PAQ3	Streptococcus_pyogenes_phage	2.8e-55	82.3
VDC39326.1\|1052249_1052924_-	single-stranded DNA-binding protein	Q938M8	Temperate_phage	1.3e-102	96.0
VDC39327.1\|1052924_1053407_-	hypothetical protein	Q938M9	Temperate_phage	4.1e-50	99.4
VDC39328.1\|1053428_1053683_-	hypothetical protein	Q938N0	Temperate_phage	1.8e-41	97.6
VDC39329.1\|1053663_1054017_-	hypothetical protein	A0A097PAU3	Streptococcus_pyogenes_phage	2.8e-16	54.0
VDC39330.1\|1054029_1054167_-	phage protein	J7KBQ4	Streptococcus_phage	2.7e-07	78.4
VDC39331.1\|1054157_1054940_-	DNA replication protein	A0A097PAQ0	Streptococcus_pyogenes_phage	3.9e-143	96.9
VDC39332.1\|1054926_1055757_-	DnaD domain protein	A0A1S5S918	Streptococcus_phage	6.4e-67	54.7
VDC39333.1\|1055970_1056432_+	hypothetical protein	NA	NA	NA	NA
VDC39334.1\|1056562_1056772_+	hypothetical protein	NA	NA	NA	NA
VDC39335.1\|1056881_1057082_-	XRE family transcriptional regulator	A0A141E205	Streptococcus_phage	2.7e-08	59.6
VDC39336.1\|1057155_1057542_+	hypothetical protein	A0A097PAT1	Streptococcus_pyogenes_phage	1.2e-65	100.0
VDC39337.1\|1057530_1057740_-	hypothetical protein	A0A097PAQ9	Streptococcus_pyogenes_phage	1.7e-32	100.0
VDC39338.1\|1057793_1058393_+	hypothetical protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
VDC39339.1\|1058422_1058581_-	hypothetical protein	A0A097PAP2	Streptococcus_pyogenes_phage	4.8e-24	100.0
VDC39340.1\|1058937_1059762_+	XRE family transcriptional regulator	A0A097PBE5	Streptococcus_pyogenes_phage	1.2e-131	91.6
VDC39341.1\|1059797_1060691_+	hypothetical protein	A0A1I9LJQ0	Stx_converting_phage	1.2e-68	47.5
VDC39342.1\|1060811_1061900_+\|integrase	site-specific integrase	A0A097PAS9	Streptococcus_pyogenes_phage	4.7e-203	99.2
VDC39343.1\|1062031_1062145_+	unknown phage protein	NA	NA	NA	NA
1061943:1062038	attR	NA	NA	NA	NA
VDC39344.1\|1062262_1062883_+	DUF3862 domain-containing protein	NA	NA	NA	NA
VDC39345.1\|1063139_1065404_-	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7

DBSCAN-SWA_8

1103369 : 1145312

Enterococcus_phage(30.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC39381.1\|1103369_1103885_+\|transposase	transposase	NA	NA	NA	NA
VDC39382.1\|1103905_1104712_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.9e-64	50.0
VDC39383.1\|1104760_1105492_-	rRNA pseudouridine synthase	NA	NA	NA	NA
VDC39384.1\|1105606_1105972_+	diaminopimelate epimerase	NA	NA	NA	NA
VDC39386.1\|1106091_1107312_-	MFS transporter	NA	NA	NA	NA
VDC39387.1\|1107685_1109170_+	DUF1846 family protein	NA	NA	NA	NA
VDC39388.1\|1109276_1109678_-	thioesterase	NA	NA	NA	NA
VDC39389.1\|1109762_1110275_-	phosphorylase	F5CA76	Streptococcus_phi-m46.1-like_phage	3.0e-91	97.1
VDC39390.1\|1110579_1111935_-\|tRNA	tRNA (uracil-5-)-methyltransferase	D0R096	Streptococcus_phage	2.3e-252	98.2
VDC39391.1\|1112016_1113468_-	LytR family transcriptional regulator	NA	NA	NA	NA
VDC39392.1\|1113675_1114167_-	shikimate kinase	NA	NA	NA	NA
VDC39393.1\|1114159_1115443_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
VDC39394.1\|1115553_1116519_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
VDC39395.1\|1116520_1117381_-	methionine aminopeptidase	NA	NA	NA	NA
VDC39396.1\|1117396_1118680_-	hypothetical protein	NA	NA	NA	NA
VDC39397.1\|1118688_1119231_-	N-acetyltransferase	NA	NA	NA	NA
VDC39398.1\|1119468_1120122_-	protein G alpha 2M-binding protein (Grab)	NA	NA	NA	NA
VDC39399.1\|1120479_1121739_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
VDC39400.1\|1121912_1123109_-	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	1.3e-137	65.2
VDC39401.1\|1123645_1126024_-	internalin A	NA	NA	NA	NA
VDC39402.1\|1126227_1127169_+	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA
VDC39403.1\|1127143_1127347_-	DUF3272 domain-containing protein	NA	NA	NA	NA
VDC39404.1\|1127441_1129112_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	5.1e-47	41.1
VDC39405.1\|1129111_1129609_-	GAF domain containing protein	NA	NA	NA	NA
VDC39406.1\|1129753_1130563_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
VDC39407.1\|1130615_1130879_-	DUF1294 domain-containing protein	NA	NA	NA	NA
VDC39408.1\|1130958_1131585_-	uridine kinase	A0A1V0SAA3	Catovirus	2.2e-35	39.7
VDC39409.1\|1131682_1132768_+	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-33	32.3
VDC39410.1\|1132878_1134153_-	deacetylase	NA	NA	NA	NA
VDC39411.1\|1134247_1135675_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
VDC39412.1\|1135859_1137593_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
VDC39413.1\|1137597_1137861_-	phosphocarrier protein HPr	NA	NA	NA	NA
VDC39414.1\|1138253_1138472_+	NrdH-redoxin	A0A249XUR7	Enterococcus_phage	1.1e-13	49.3
VDC39415.1\|1138491_1140651_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.4e-262	63.6
VDC39416.1\|1140983_1141943_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	3.7e-127	70.5
VDC39417.1\|1142004_1143231_+	chloride channel protein	NA	NA	NA	NA
VDC39418.1\|1143368_1143662_+\|transposase	IS3 family transposase	NA	NA	NA	NA
VDC39419.1\|1143694_1143991_+	DNA-binding protein	NA	NA	NA	NA
VDC39420.1\|1144339_1144525_+\|transposase	transposase	NA	NA	NA	NA
VDC39421.1\|1144616_1145312_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_9

1183504 : 1221722

Streptococcus_phage(72.34%)

tail,terminase,integrase,portal,holin

attL 1185709:1185728|attR 1219107:1219126

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDC39462.1\|1183504_1185367_-	PerR-regulated metal transporter A; heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.0e-88	33.7
1185709:1185728	attL	NA	NA	NA	NA
VDC39463.1\|1185897_1186080_-	paratox	A3F673	Streptococcus_phage	1.4e-19	76.7
VDC39464.1\|1186312_1187119_+	DNAse	NA	NA	NA	NA
VDC39465.1\|1187389_1187824_+	hypothetical protein	NA	NA	NA	NA
VDC39466.1\|1187893_1189099_-	phage associated protein	Q938J4	Temperate_phage	5.9e-207	84.3
VDC39467.1\|1189214_1189442_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
VDC39468.1\|1189438_1189714_-	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
VDC39469.1\|1189723_1190341_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	4.4e-73	83.9
VDC39470.1\|1190337_1190775_-	DUF1617 domain-containing protein	Q938J8	Temperate_phage	3.8e-71	97.9
VDC39471.1\|1190786_1192655_-	hypothetical protein	Q938J9	Temperate_phage	1.2e-89	56.2
VDC39472.1\|1192651_1193347_-	hypothetical protein	A0A1B1P761	Bacillus_phage	7.6e-05	29.6
VDC39473.1\|1193343_1195701_-	hypothetical protein	M1NRG5	Streptococcus_phage	6.5e-141	50.6
VDC39474.1\|1195700_1196072_-	hypothetical protein	M1PL84	Streptococcus_phage	2.9e-35	62.4
VDC39475.1\|1196086_1196350_-	hypothetical protein	A0A0B5A2F3	Streptococcus_phage	1.0e-18	55.8
VDC39476.1\|1196360_1196954_-\|tail	tail protein	M1PKG8	Streptococcus_phage	3.5e-59	62.5
VDC39477.1\|1196965_1197301_-	hypothetical protein	A0A1P8BMR5	Lactococcus_phage	9.8e-35	64.9
VDC39478.1\|1197301_1197538_-	hypothetical protein	A0A0B5A7G2	Streptococcus_phage	2.5e-21	71.4
VDC39479.1\|1197530_1197869_-	hypothetical protein	M1PFF8	Streptococcus_phage	2.2e-42	70.3
VDC39480.1\|1197828_1198251_-	hypothetical protein	A0A0B5A2F6	Streptococcus_phage	3.7e-47	70.8
VDC39481.1\|1198260_1198461_-	hypothetical protein	NA	NA	NA	NA
VDC39482.1\|1198460_1199372_-	hypothetical protein	M1PFL0	Streptococcus_phage	9.9e-114	67.3
VDC39483.1\|1199396_1199858_-	DUF4355 domain-containing protein	M1Q1L0	Streptococcus_phage	3.4e-38	53.2
VDC39484.1\|1199938_1201354_-\|terminase	terminase	A0A0B5A091	Streptococcus_phage	2.9e-213	74.2
VDC39485.1\|1201463_1201730_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	7.3e-33	86.4
VDC39486.1\|1201722_1201902_-	hypothetical protein	NA	NA	NA	NA
VDC39487.1\|1201951_1202176_-	hypothetical protein	NA	NA	NA	NA
VDC39488.1\|1202181_1203675_-	hypothetical protein	M1Q184	Streptococcus_phage	2.2e-86	54.6
VDC39489.1\|1203667_1204936_-\|portal	phage portal protein	M1PFL4	Streptococcus_phage	2.2e-188	75.6
VDC39490.1\|1204932_1205289_-	hypothetical protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
VDC39491.1\|1205437_1205782_-	HNH endonuclease	M1Q0W7	Streptococcus_phage	5.5e-41	68.5
VDC39492.1\|1205890_1206310_-	DUF1492 domain-containing protein	A0A1X9I5B5	Streptococcus_phage	8.7e-57	79.9
VDC39493.1\|1206577_1207213_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.0e-89	69.4
VDC39494.1\|1207214_1207484_-	hypothetical protein	A7J287	Streptococcus_phage	9.6e-25	71.9
VDC39495.1\|1207567_1208080_-	hypothetical protein	Q708P9	Streptococcus_phage	2.3e-67	78.0
VDC39496.1\|1208076_1208418_-	hypothetical protein	M1NS23	Streptococcus_phage	4.8e-13	38.7
VDC39497.1\|1208595_1208763_-	phage protein	A0A1S5SEF3	Streptococcus_phage	3.3e-07	51.9
VDC39498.1\|1208772_1209570_-	hypothetical protein	J7KGZ1	Streptococcus_phage	6.0e-131	84.5
VDC39499.1\|1209566_1210496_-	DNA recombination protein RecT	M1NRN6	Streptococcus_phage	1.1e-91	72.2
VDC39500.1\|1210498_1210828_-	hypothetical protein	J7KGX3	Streptococcus_phage	2.1e-45	83.5
VDC39501.1\|1210883_1211090_-	hypothetical protein	NA	NA	NA	NA
VDC39502.1\|1211098_1211239_-	hypothetical protein	NA	NA	NA	NA
VDC39503.1\|1211235_1211469_-	hypothetical protein	Q938N1	Temperate_phage	6.1e-36	94.8
VDC39504.1\|1211449_1211839_-	DnaD domain protein	Q938N2	Temperate_phage	9.3e-45	81.4
VDC39505.1\|1212322_1212508_-	hypothetical protein	Q938N3	Temperate_phage	5.8e-21	88.5
VDC39506.1\|1212509_1212821_-	hypothetical protein	A0A1S5SA25	Streptococcus_phage	4.1e-43	78.4
VDC39507.1\|1212898_1213084_-	transcriptional regulator	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
VDC39508.1\|1213250_1213490_+	hypothetical protein	NA	NA	NA	NA
VDC39509.1\|1213631_1214438_+	hypothetical protein	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
VDC39510.1\|1214670_1215387_-	phage antirepressor protein	C9WB91	Streptococcus_virus	6.8e-118	87.7
VDC39511.1\|1215398_1215590_-	hypothetical protein	A7J270	Streptococcus_phage	4.0e-25	92.1
VDC39512.1\|1216225_1216321_+	type I addiction module toxin, Fst family	NA	NA	NA	NA
VDC39513.1\|1216743_1217091_+	XRE family transcriptional regulator	A0A1S5SEQ8	Streptococcus_phage	3.6e-40	71.8
VDC39514.1\|1217094_1217475_+	ImmA/IrrE family metallo-endopeptidase	A0A1S5SFH2	Streptococcus_phage	8.0e-41	61.1
VDC39515.1\|1217486_1217753_+	DUF4177 domain-containing protein	NA	NA	NA	NA
VDC39516.1\|1217876_1219019_+\|integrase	putative integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
VDC39517.1\|1219108_1219384_-	DNA-binding protein HU	A7KV42	Bacillus_phage	2.6e-25	73.0
1219107:1219126	attR	NA	NA	NA	NA
VDC39518.1\|1219482_1220070_-	DUF2140 domain-containing protein	NA	NA	NA	NA
VDC39519.1\|1220047_1220890_-	lipase	NA	NA	NA	NA
VDC39520.1\|1220882_1221722_-	hypothetical protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7

DBSCAN-SWA_10

1425574 : 1469641

Streptococcus_phage(81.63%)

tRNA,tail,terminase,integrase,portal,head

attL 1425437:1425453|attR 1466237:1466253

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1425437:1425453	attL	NA	NA	NA	NA
VDC39708.1\|1425574_1425754_-	paratox	A3F673	Streptococcus_phage	5.6e-21	83.1
VDC39709.1\|1425992_1427165_+	streptodornase SdaD2	A7J2B8	Streptococcus_phage	4.7e-76	49.8
VDC39710.1\|1427280_1428477_-	phage associated protein	Q938J4	Temperate_phage	6.1e-196	82.2
VDC39712.1\|1428587_1428773_-	hypothetical protein	Q938J5	Temperate_phage	9.5e-24	93.4
VDC39713.1\|1428769_1429069_-	hypothetical protein	Q938J6	Temperate_phage	3.5e-36	82.3
VDC39714.1\|1429079_1429700_-	hypothetical protein	A3F662	Streptococcus_phage	8.3e-80	88.8
VDC39715.1\|1429702_1429864_-	Ribosome maturation factor RimP	NA	NA	NA	NA
VDC39716.1\|1429872_1431780_-	hypothetical protein	Q938J9	Temperate_phage	1.3e-134	60.9
VDC39717.1\|1431790_1432426_-	hypothetical protein	A0A097PBF7	Streptococcus_pyogenes_phage	2.2e-75	67.6
VDC39718.1\|1432425_1433481_-	hypothetical protein	A3F657	Streptococcus_phage	1.2e-126	73.2
VDC39719.1\|1433477_1435460_-	peptidase	A7J2A7	Streptococcus_phage	0.0e+00	92.5
VDC39720.1\|1435469_1436312_-	hypothetical protein	A7J2A6	Streptococcus_phage	8.5e-160	99.6
VDC39721.1\|1436323_1440706_-	hypothetical protein P9_gp39	A7J2A5	Streptococcus_phage	3.2e-226	76.4
VDC39722.1\|1440720_1440954_-	hypothetical protein	A7J2A4	Streptococcus_phage	4.4e-34	100.0
VDC39723.1\|1441028_1441484_-	hypothetical protein	A7J2A3	Streptococcus_phage	8.3e-77	100.0
VDC39724.1\|1441537_1442137_-\|tail	phage major tail protein, TP901-1 family	A7J2A2	Streptococcus_phage	4.1e-92	98.9
VDC39725.1\|1442148_1442508_-	hypothetical protein	A7J2A1	Streptococcus_phage	6.8e-58	97.5
VDC39726.1\|1442511_1442856_-	hypothetical protein	A7J2A0	Streptococcus_phage	6.1e-56	99.1
VDC39727.1\|1442852_1443131_-	hypothetical protein	A7J299	Streptococcus_phage	4.2e-47	98.9
VDC39728.1\|1443141_1443498_-	hypothetical protein	A7J298	Streptococcus_phage	2.8e-56	97.5
VDC39729.1\|1443509_1444397_-	hypothetical protein	A7J297	Streptococcus_phage	3.6e-161	99.7
VDC39730.1\|1444409_1444979_-	DUF4355 domain-containing protein	A7J296	Streptococcus_phage	2.6e-80	97.9
VDC39731.1\|1445134_1445401_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.7e-34	88.6
VDC39732.1\|1445403_1445592_-	hypothetical protein	A7J294	Streptococcus_phage	1.4e-22	98.4
VDC39733.1\|1445622_1447068_-\|head	phage head morphogenesis protein	A7J293	Streptococcus_phage	3.4e-257	92.9
VDC39734.1\|1447027_1448560_-\|portal	phage portal protein	A7J292	Streptococcus_phage	1.3e-286	98.2
VDC39735.1\|1448575_1449853_-\|terminase	PBSX family phage terminase large subunit	A7J291	Streptococcus_phage	1.3e-241	97.6
VDC39736.1\|1449842_1450295_-\|terminase	terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
VDC39737.1\|1450384_1450801_-	transcriptional regulator	A7J289	Streptococcus_phage	6.6e-73	100.0
VDC39738.1\|1450797_1450989_-	hypothetical protein	NA	NA	NA	NA
VDC39739.1\|1450978_1451830_-	site-specific DNA-methyltransferase	A0A1W6JMZ7	Lactococcus_phage	1.5e-100	71.9
VDC39740.1\|1451838_1452105_-	hypothetical protein	A7J287	Streptococcus_phage	5.4e-20	65.2
VDC39741.1\|1452101_1452269_-	phage protein	A7J285	Streptococcus_phage	1.9e-23	94.5
VDC39742.1\|1452269_1453592_-	ATP-dependent helicase	A7J284	Streptococcus_phage	1.9e-254	98.4
VDC39744.1\|1453588_1453864_-	VRR-NUC domain-containing protein	A7J283	Streptococcus_phage	9.1e-47	100.0
VDC39745.1\|1454250_1456635_-	DNA primase	A7J282	Streptococcus_phage	4.1e-276	94.4
VDC39747.1\|1456639_1458562_-	DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	96.7
VDC39748.1\|1458604_1459162_-	DUF2815 domain-containing protein	D2J040	Enterococcus_phage	2.5e-51	57.9
VDC39749.1\|1459172_1459571_-	hypothetical protein	NA	NA	NA	NA
VDC39751.1\|1459574_1460729_-	DUF2800 domain-containing protein	A7J278	Streptococcus_phage	4.5e-204	91.9
VDC39752.1\|1460728_1461028_-	hypothetical protein	A7J277	Streptococcus_phage	1.8e-43	100.0
VDC39753.1\|1461115_1461319_-	hypothetical protein	A7J276	Streptococcus_phage	2.3e-31	95.5
VDC39754.1\|1461315_1461468_-	phage protein	A7J275	Streptococcus_phage	4.1e-17	92.0
VDC39755.1\|1461464_1461851_-	hypothetical protein	A7J274	Streptococcus_phage	3.1e-56	88.2
VDC39756.1\|1461847_1462051_-	hypothetical protein	NA	NA	NA	NA
VDC39757.1\|1462043_1462214_-	hypothetical protein	A7J273	Streptococcus_phage	6.9e-21	89.3
VDC39759.1\|1462210_1462486_-	hypothetical protein	A7J272	Streptococcus_phage	5.9e-46	95.6
VDC39760.1\|1462547_1462763_-	hypothetical protein	M1Q1B4	Streptococcus_phage	4.2e-23	76.8
VDC39761.1\|1462810_1463224_+	hypothetical protein	NA	NA	NA	NA
VDC39762.1\|1463204_1463360_-	phage protein	NA	NA	NA	NA
VDC39764.1\|1463634_1464036_+	XRE family transcriptional regulator	A7J269	Streptococcus_phage	1.1e-40	72.9
VDC39765.1\|1464049_1464433_+	hypothetical protein	A7J268	Streptococcus_phage	5.3e-69	99.2
VDC39766.1\|1464443_1464995_+	hypothetical protein P9_gp02	A7J267	Streptococcus_phage	3.4e-85	92.3
VDC39767.1\|1465111_1466191_+\|integrase	site-specific integrase	A7J266	Streptococcus_phage	1.3e-176	86.9
VDC39768.1\|1466388_1467024_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
1466237:1466253	attR	NA	NA	NA	NA
VDC39769.1\|1467023_1467815_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
VDC39770.1\|1467878_1468913_-	multidrug ABC transporter permease	NA	NA	NA	NA
VDC39771.1\|1468915_1469641_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.9e-20	28.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR031521

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection