CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR130543	Klebsiella variicola strain 04153260899A genome assembly, chromosome: 1	1 crisprs	NA	0	0	0	0

Cas Category Instructions

Results visualization

1. LR130543

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CRISPR-Cas detection and classification

Crispr_ID: LR130543_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR130543_1

3854205-3854313

Orphan

Consensus_repeat	Method
AGGGAGAGGGAGCACACCCTAAAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR130543_1

>merge|LR130543|1|3854205-3854313|CRISPRCasFinder
AGGGAGAGGGAGCACACCCTAAAAAAGGCCATTGTCATTGCCTTTTTGCGTTTACCTTGCCCTCACCCCAACCCTCTCCCACAGGGAGAGGGAGCAAACCCTAAAAAAG

>LR130543|1|1|3854205-3854313|CRISPRCasFinder
AGGGAGAGGGAGCACACCCTAAAAAAG	GCCATTGTCATTGCCTTTTTGCGTTTACCTTGCCCTCACCCCAACCCTCTCCCAC
AGGGAGAGGGAGCAAACCCTAAAAAAG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage