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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR130559 Escherichia coli strain MS14385 genome assembly, plasmid: 5 1 crisprs NA 0 1 0 0
LR130560 Escherichia coli strain MS14385 genome assembly, plasmid: 6 0 crisprs NA 0 0 0 0
LR130556 Escherichia coli strain MS14385 genome assembly, plasmid: 2 0 crisprs NA 0 0 0 0
LR130555 Escherichia coli strain MS14385 genome assembly, chromosome: 1 6 crisprs NA 2 26 0 0
LR130561 Escherichia coli strain MS14385 genome assembly, plasmid: 7 0 crisprs NA 0 0 0 0
LR130558 Escherichia coli strain MS14385 genome assembly, plasmid: 4 0 crisprs NA 0 0 0 0
LR130557 Escherichia coli strain MS14385 genome assembly, plasmid: 3 0 crisprs NA 0 0 0 0

Results visualization

1. LR130559
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130559_1 38294-38389 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP048340 Escherichia coli strain 142 plasmid p142_C, complete sequence 6214-6263 0 1.0
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 CP053252 Escherichia coli strain SCU-204 plasmid pSCU-204-5, complete sequence 22928-22977 0 1.0
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_LR130559 Escherichia coli strain MS14385 isolate MS14385 plasmid 5 38317-38366 0 1.0
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP042622 Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-7, complete sequence 45874-45923 0 1.0
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP020497 Escherichia coli strain 103 plasmid unnamed2, complete sequence 41364-41413 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_LT985302 Escherichia coli strain ECOR 39 genome assembly, plasmid: RCS82_pI 15771-15820 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 AP019710 Escherichia coli O145:H28 122715 plasmid pO145_122715_2 DNA, complete genome 8553-8602 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP009861 Escherichia coli strain ECONIH1 plasmid pECO-b75, complete sequence 6459-6508 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP032259 Escherichia coli strain AR_0067 plasmid unnamed2, complete sequence 29357-29406 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP020518 Escherichia coli strain 222 plasmid unnamed2, complete sequence 9207-9256 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP024865 Escherichia coli strain AR_0015 plasmid unitig_3_pilon, complete sequence 18879-18928 1 0.98
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP023368 Escherichia coli strain 1428 plasmid p48, complete sequence 8663-8712 2 0.96
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 CP025877 Escherichia coli strain 503458 plasmid p503458_49, complete sequence 13912-13961 3 0.94
LR130559_1 1.1|38317|50|LR130559|CRISPRCasFinder 38317-38366 50 NZ_CP037450 Escherichia coli strain ATCC 25922 plasmid unnamed, complete sequence 11300-11349 3 0.94

1. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP048340 (Escherichia coli strain 142 plasmid p142_C, complete sequence) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

2. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to CP053252 (Escherichia coli strain SCU-204 plasmid pSCU-204-5, complete sequence) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

3. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_LR130559 (Escherichia coli strain MS14385 isolate MS14385 plasmid 5) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

4. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP042622 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-7, complete sequence) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

5. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP020497 (Escherichia coli strain 103 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

6. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_LT985302 (Escherichia coli strain ECOR 39 genome assembly, plasmid: RCS82_pI) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

7. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to AP019710 (Escherichia coli O145:H28 122715 plasmid pO145_122715_2 DNA, complete genome) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

8. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP009861 (Escherichia coli strain ECONIH1 plasmid pECO-b75, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

9. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP032259 (Escherichia coli strain AR_0067 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

10. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP020518 (Escherichia coli strain 222 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

11. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP024865 (Escherichia coli strain AR_0015 plasmid unitig_3_pilon, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

12. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP023368 (Escherichia coli strain 1428 plasmid p48, complete sequence) position: , mismatch: 2, identity: 0.96

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcat	Protospacer
********************* **************************.*

13. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to CP025877 (Escherichia coli strain 503458 plasmid p503458_49, complete sequence) position: , mismatch: 3, identity: 0.94

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacacttttcatccgccaaaaagttggttatgcttacctcat	Protospacer
***********.********* **************************.*

14. spacer 1.1|38317|50|LR130559|CRISPRCasFinder matches to NZ_CP037450 (Escherichia coli strain ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.94

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacacttttcatccgccaaaaagttggttatgcttacctcat	Protospacer
***********.********* **************************.*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. LR130555
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130555_1 1161495-1162807 Orphan I-E
21 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130555_2 1188354-1189115 Orphan I-E
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130555_3 2435775-2435898 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130555_4 3119679-3119770 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130555_5 3252758-3252905 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR130555_6 4181696-4181828 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
LR130555_1 1.15|1162380|32|LR130555|CRISPRCasFinder,CRT 1162380-1162411 32 LR130555.1 1141663-1141694 1 0.969
LR130555_1 1.33|1162379|33|LR130555|PILER-CR 1162379-1162411 33 LR130555.1 1141663-1141695 1 0.97

1. spacer 1.15|1162380|32|LR130555|CRISPRCasFinder,CRT matches to position: 1141663-1141694, mismatch: 1, identity: 0.969

ttccggctacttttgttgctccctgctcatcc	CRISPR spacer
ttccagctacttttgttgctccctgctcatcc	Protospacer
****.***************************

2. spacer 1.33|1162379|33|LR130555|PILER-CR matches to position: 1141663-1141695, mismatch: 1, identity: 0.97

attccggctacttttgttgctccctgctcatcc	CRISPR spacer
attccagctacttttgttgctccctgctcatcc	Protospacer
*****.***************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR130555_4 4.1|3119705|40|LR130555|CRISPRCasFinder 3119705-3119744 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
LR130555_6 6.1|4181713|42|LR130555|PILER-CR 4181713-4181754 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 1 0.976
LR130555_3 3.1|2435818|38|LR130555|CRISPRCasFinder 2435818-2435855 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
LR130555_6 6.2|4181772|40|LR130555|PILER-CR 4181772-4181811 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 2 0.95
LR130555_2 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188932-1188963 32 MF547662 Clostridioides phage LIBA6276, complete genome 37369-37400 4 0.875
LR130555_2 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188932-1188963 32 MF547663 Clostridioides phage LIBA2945, complete genome 37369-37400 4 0.875
LR130555_2 2.2|1188444|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188444-1188475 32 MK972713 Salmonella phage SW5, complete genome 27687-27718 5 0.844
LR130555_2 2.2|1188444|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188444-1188475 32 MK972714 Salmonella phage SW3, complete genome 27909-27940 5 0.844
LR130555_2 2.2|1188444|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188444-1188475 32 NC_049460 Salmonella phage SI7, complete genome 18129-18160 5 0.844
LR130555_2 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188932-1188963 32 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 83504-83535 5 0.844
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_AP022319 Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence 1203814-1203845 6 0.812
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 1167510-1167541 6 0.812
LR130555_1 1.4|1161707|32|LR130555|CRISPRCasFinder,CRT 1161707-1161738 32 NC_018022 Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence 373536-373567 7 0.781
LR130555_2 2.1|1188383|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188383-1188414 32 LR597649 Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1 17850-17881 7 0.781
LR130555_2 2.1|1188383|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188383-1188414 32 NC_049393 Escherichia phage ESSI2_ev040 genome assembly, chromosome: 1 17628-17659 7 0.781
LR130555_2 2.1|1188383|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188383-1188414 32 NC_049394 Escherichia phage ESSI2_ev129 genome assembly, chromosome: 1 17890-17921 7 0.781
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 1175642-1175673 7 0.781
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NZ_CP053709 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence 405764-405795 8 0.75
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NZ_CP053710 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence 354033-354064 8 0.75
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NZ_CP053712 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence 91487-91518 8 0.75
LR130555_1 1.9|1162012|32|LR130555|CRISPRCasFinder,CRT 1162012-1162043 32 NC_013085 Synechococcus phage S-RSM4, complete genome 75536-75567 8 0.75
LR130555_1 1.9|1162012|32|LR130555|CRISPRCasFinder,CRT 1162012-1162043 32 FM207411 Synechococcus phage S-RSM4 complete genome 75536-75567 8 0.75
LR130555_1 1.13|1162257|33|LR130555|CRISPRCasFinder,CRT 1162257-1162289 33 NZ_CP020331 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence 413541-413573 8 0.758
LR130555_1 1.18|1162563|32|LR130555|CRISPRCasFinder,CRT 1162563-1162594 32 MN855615 Siphoviridae sp. isolate 320, complete genome 7076-7107 8 0.75
LR130555_1 1.18|1162563|32|LR130555|CRISPRCasFinder,CRT 1162563-1162594 32 NC_034248 Rhizobium phage RHEph10, complete genome 31444-31475 8 0.75
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NC_031109 Gordonia phage Jumbo, complete genome 25391-25422 8 0.75
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_CP050093 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence 398774-398805 8 0.75
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NC_008384 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence 565533-565564 8 0.75
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_CP042332 Bosea sp. F3-2 plasmid pB32-1, complete sequence 63515-63546 8 0.75
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 350647-350678 8 0.75
LR130555_2 2.4|1188566|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188566-1188597 32 CP022610 Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence 10541-10572 8 0.75
LR130555_2 2.5|1188627|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188627-1188658 32 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 57083-57114 8 0.75
LR130555_2 2.6|1188688|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188688-1188719 32 MN694482 Marine virus AFVG_250M11, complete genome 1728-1759 8 0.75
LR130555_2 2.8|1188810|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188810-1188841 32 NZ_CP008818 Ochrobactrum anthropi strain OAB plasmid 2, complete sequence 52227-52258 8 0.75
LR130555_2 2.8|1188810|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188810-1188841 32 NC_009671 Ochrobactrum anthropi ATCC 49188 plasmid pOANT03, complete sequence 23638-23669 8 0.75
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 JX469828 Uncultured bacterium plasmid pRSB223, complete sequence 47585-47616 9 0.719
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 JX469829 Uncultured bacterium plasmid pB1, complete sequence 23183-23214 9 0.719
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NZ_CP015881 Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence 393203-393234 9 0.719
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NC_008766 Acidovorax sp. JS42 plasmid pAOVO02, complete sequence 3158-3189 9 0.719
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NZ_CP020331 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence 569059-569090 9 0.719
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NZ_MN366361 Bacterium plasmid pALTS33, complete sequence 54575-54606 9 0.719
LR130555_1 1.10|1162073|32|LR130555|CRISPRCasFinder,CRT 1162073-1162104 32 MW084976 Bacillus phage Kirov, complete genome 56770-56801 9 0.719
LR130555_1 1.16|1162441|32|LR130555|CRISPRCasFinder,CRT 1162441-1162472 32 NZ_CP016721 Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence 30466-30497 9 0.719
LR130555_1 1.16|1162441|32|LR130555|CRISPRCasFinder,CRT 1162441-1162472 32 NZ_CP016727 Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence 30464-30495 9 0.719
LR130555_1 1.20|1162685|32|LR130555|CRISPRCasFinder,CRT 1162685-1162716 32 MK448690 Streptococcus phage Javan169, complete genome 9831-9862 9 0.719
LR130555_1 1.20|1162685|32|LR130555|CRISPRCasFinder,CRT 1162685-1162716 32 MK448854 Streptococcus phage Javan146, complete genome 11811-11842 9 0.719
LR130555_1 1.31|1162256|34|LR130555|PILER-CR 1162256-1162289 34 NZ_CP020331 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence 413540-413573 9 0.735
LR130555_1 1.36|1162562|33|LR130555|PILER-CR 1162562-1162594 33 MN855615 Siphoviridae sp. isolate 320, complete genome 7075-7107 9 0.727
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_CP017077 Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence 555186-555217 9 0.719
LR130555_2 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188505-1188536 32 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 471692-471723 9 0.719
LR130555_2 2.5|1188627|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188627-1188658 32 NZ_CP053709 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence 137043-137074 9 0.719
LR130555_2 2.7|1188749|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188749-1188780 32 MT446414 UNVERIFIED: Escherichia virus TH43, complete genome 38100-38131 9 0.719
LR130555_2 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188871-1188902 32 MN812211 Flavobacterium phage vB_FspS_laban6-1, complete genome 21752-21783 9 0.719
LR130555_2 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188871-1188902 32 NZ_CP012534 Psychrobacter sp. P11G5 plasmid pPspP11G5a, complete sequence 26937-26968 9 0.719
LR130555_2 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188932-1188963 32 MN693584 Marine virus AFVG_25M163, complete genome 29591-29622 9 0.719
LR130555_2 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188932-1188963 32 MN103543 Pseudomonas phage vB_PaeM_PS119XW, complete genome 258501-258532 9 0.719
LR130555_2 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188932-1188963 32 MK599315 Pseudomonas phage PA1C, complete genome 257887-257918 9 0.719
LR130555_5 5.1|3252786|32|LR130555|CRISPRCasFinder 3252786-3252817 32 NZ_CP045060 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence 9736-9767 9 0.719
LR130555_5 5.1|3252786|32|LR130555|CRISPRCasFinder 3252786-3252817 32 NZ_CP045053 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence 9737-9768 9 0.719
LR130555_5 5.1|3252786|32|LR130555|CRISPRCasFinder 3252786-3252817 32 NZ_CP045057 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence 9736-9767 9 0.719
LR130555_5 5.3|3252794|32|LR130555|PILER-CR 3252794-3252825 32 NZ_CP045060 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence 9736-9767 9 0.719
LR130555_5 5.3|3252794|32|LR130555|PILER-CR 3252794-3252825 32 NZ_CP045053 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence 9737-9768 9 0.719
LR130555_5 5.3|3252794|32|LR130555|PILER-CR 3252794-3252825 32 NZ_CP045057 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence 9736-9767 9 0.719
LR130555_1 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT 1161951-1161982 32 NC_004929 Ruegeria sp. PR1b plasmid pSD20, complete sequence 67373-67404 10 0.688
LR130555_2 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188871-1188902 32 NZ_KX711616 Bacillus subtilis strain 72 plasmid pBS72, complete sequence 1474-1505 10 0.688
LR130555_2 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT 1188871-1188902 32 NC_023026 Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence 2981-3012 11 0.656

1. spacer 4.1|3119705|40|LR130555|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 6.1|4181713|42|LR130555|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976

tgtcacacgcagataaatccaactttcaatattgttaagctc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.**

3. spacer 3.1|2435818|38|LR130555|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

4. spacer 6.2|4181772|40|LR130555|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.95

catggcgtagcaaaaagaaattttcaatattgttttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *********************.*******

5. spacer 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** * 

6. spacer 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** * 

7. spacer 2.2|1188444|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MK972713 (Salmonella phage SW5, complete genome) position: , mismatch: 5, identity: 0.844

gaccagtcgggccagacatcggggacgcagaa	CRISPR spacer
gaccagtcgggccagacatcgagcacggccaa	Protospacer
*********************.* ***   **

8. spacer 2.2|1188444|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MK972714 (Salmonella phage SW3, complete genome) position: , mismatch: 5, identity: 0.844

gaccagtcgggccagacatcggggacgcagaa	CRISPR spacer
gaccagtcgggccagacatcgagcacggccaa	Protospacer
*********************.* ***   **

9. spacer 2.2|1188444|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_049460 (Salmonella phage SI7, complete genome) position: , mismatch: 5, identity: 0.844

gaccagtcgggccagacatcggggacgcagaa	CRISPR spacer
gaccagtcgggccagacatcgagcacggccaa	Protospacer
*********************.* ***   **

10. spacer 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cctataaaa	Protospacer
*** ******************* ..**** * 

11. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 6, identity: 0.812

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
cacgcggccatcgcgcagttcgtcgaacgccg	Protospacer
*  .* *********** ***********.**

12. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.812

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
gcgttcgccatcgcgcatttcgtccatcgttg	Protospacer
 ** .******************* * ***.*

13. spacer 1.4|1161707|32|LR130555|CRISPRCasFinder,CRT matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 7, identity: 0.781

aatggcgctgccgatcgacaaatgggacctgg-	CRISPR spacer
gatggcgatgccgatggacaaat-gcacatgct	Protospacer
.****** ******* ******* * ** **  

14. spacer 2.1|1188383|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

caaacgtcaggcggaagtgttccggtcatata	CRISPR spacer
aaaggctcaggctgaagtgttccggtcttaca	Protospacer
 **.  ****** ************** **.*

15. spacer 2.1|1188383|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_049393 (Escherichia phage ESSI2_ev040 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

caaacgtcaggcggaagtgttccggtcatata	CRISPR spacer
aaaggctcaggctgaagtgttccggtcttaca	Protospacer
 **.  ****** ************** **.*

16. spacer 2.1|1188383|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_049394 (Escherichia phage ESSI2_ev129 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

caaacgtcaggcggaagtgttccggtcatata	CRISPR spacer
aaaggctcaggctgaagtgttccggtcttaca	Protospacer
 **.  ****** ************** **.*

17. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.781

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
gcgttcgccatcgcgcatttcgtccatcgctg	Protospacer
 ** .******************* * **..*

18. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ccccgccagcgccccgcgcgcctgcttcgtcc	Protospacer
*** ********** ******** .** ..*.

19. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ccccgccagcgccccgcgcgcctgcttcgtcc	Protospacer
*** ********** ******** .** ..*.

20. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP053712 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ccccgccagcgccccgcgcgcctgcttcgtcc	Protospacer
*** ********** ******** .** ..*.

21. spacer 1.9|1162012|32|LR130555|CRISPRCasFinder,CRT matches to NC_013085 (Synechococcus phage S-RSM4, complete genome) position: , mismatch: 8, identity: 0.75

-----tccttaattacaacgacaccactggaaaaatt	CRISPR spacer
gtagctcc-----tacaacgacagcattggaaaaatc	Protospacer
     ***     ********** **.*********.

22. spacer 1.9|1162012|32|LR130555|CRISPRCasFinder,CRT matches to FM207411 (Synechococcus phage S-RSM4 complete genome) position: , mismatch: 8, identity: 0.75

-----tccttaattacaacgacaccactggaaaaatt	CRISPR spacer
gtagctcc-----tacaacgacagcattggaaaaatc	Protospacer
     ***     ********** **.*********.

23. spacer 1.13|1162257|33|LR130555|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 8, identity: 0.758

cgggagccagtgctaacgatatcgcggccgcgc	CRISPR spacer
ggcgcggcagcgcgaacgatatcgcggccgccg	Protospacer
 * * * ***.** *****************  

24. spacer 1.18|1162563|32|LR130555|CRISPRCasFinder,CRT matches to MN855615 (Siphoviridae sp. isolate 320, complete genome) position: , mismatch: 8, identity: 0.75

gccgcgtacatcaacgcagcagcaagcgcata	CRISPR spacer
ccactgcccatcaaagcaccagcaagcgcata	Protospacer
 *  .*. ****** *** *************

25. spacer 1.18|1162563|32|LR130555|CRISPRCasFinder,CRT matches to NC_034248 (Rhizobium phage RHEph10, complete genome) position: , mismatch: 8, identity: 0.75

gccgcgtacatcaacgcagcagcaagcgcata	CRISPR spacer
accgcggccatcaacgcagcagcataaggaga	Protospacer
.*****  **************** . * * *

26. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_031109 (Gordonia phage Jumbo, complete genome) position: , mismatch: 8, identity: 0.75

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
gacaataccatcgcggattttgtcgaacgtcg	Protospacer
   * ..******** ****.***********

27. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
tctgacggcatcgcgcatttcggcgaacgcct	Protospacer
.* . ** ************** ******.* 

28. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
tctgacggcatcgcgcatttcggcgaacgcct	Protospacer
.* . ** ************** ******.* 

29. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
cacgacgccgtcgcgcatttcgtcgaccgcct	Protospacer
*  . ****.**************** **.* 

30. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.75

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
gccgccgccatcgcgcaattcggcgaatatgg	Protospacer
 * .************* **** ****..* *

31. spacer 2.4|1188566|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to CP022610 (Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

caaaaaaataatatccggcagtctgtacggta	CRISPR spacer
aagaaaaatcatatccggcagtctttagcgag	Protospacer
 *.****** ************** **  * .

32. spacer 2.5|1188627|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

-caacattttccaatatcacccagcaatcaatt	CRISPR spacer
gtaac-ttttctaatatcacccagcactccggg	Protospacer
 .*** *****.************** ** .  

33. spacer 2.6|1188688|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MN694482 (Marine virus AFVG_250M11, complete genome) position: , mismatch: 8, identity: 0.75

tcatgaaggcttcgattatttcttgatacctg	CRISPR spacer
tcattaaggcttcgattttttctagtttagtt	Protospacer
**** ************ ***** * *   * 

34. spacer 2.8|1188810|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008818 (Ochrobactrum anthropi strain OAB plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

-caataacaccggcatttgtccacgacaatatt	CRISPR spacer
tcggcgacg-cggcatttgtccacgacacaatt	Protospacer
 *....**. ******************  ***

35. spacer 2.8|1188810|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_009671 (Ochrobactrum anthropi ATCC 49188 plasmid pOANT03, complete sequence) position: , mismatch: 8, identity: 0.75

-caataacaccggcatttgtccacgacaatatt	CRISPR spacer
tcggcgacg-cggcatttgtccacgacacaatt	Protospacer
 *....**. ******************  ***

36. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to JX469828 (Uncultured bacterium plasmid pRSB223, complete sequence) position: , mismatch: 9, identity: 0.719

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ggcctccagcgccttgcgcgcctctttagcgg	Protospacer
  *  ********. *************.*  

37. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to JX469829 (Uncultured bacterium plasmid pB1, complete sequence) position: , mismatch: 9, identity: 0.719

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ggcctccagcgccttgcgcgcctctttagcgg	Protospacer
  *  ********. *************.*  

38. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.719

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
gccgggcagcgcccggcgcgcctcagccatca	Protospacer
 **.* ******************  . *.* 

39. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NC_008766 (Acidovorax sp. JS42 plasmid pAOVO02, complete sequence) position: , mismatch: 9, identity: 0.719

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ggcctccagcgccttgcgcgcctctttagcgg	Protospacer
  *  ********. *************.*  

40. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.719

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
cggagcccgcgcccggcgcgccgcttcacatg	Protospacer
*  **** ************** ***.*  . 

41. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NZ_MN366361 (Bacterium plasmid pALTS33, complete sequence) position: , mismatch: 9, identity: 0.719

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ggcctccagcgccttgcgcgcctctttagcgg	Protospacer
  *  ********. *************.*  

42. spacer 1.10|1162073|32|LR130555|CRISPRCasFinder,CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 9, identity: 0.719

ttcgccaggtgttttcttttcccggtcagtca	CRISPR spacer
aattccaagtgttttcttttcccagtctataa	Protospacer
  . ***.***************.*** .* *

43. spacer 1.16|1162441|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP016721 (Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence) position: , mismatch: 9, identity: 0.719

aatatttacttggatgcgtcggacattgaatc	CRISPR spacer
tttcatgacttgaatgcgtaggacattgaaag	Protospacer
  *  * *****.****** **********  

44. spacer 1.16|1162441|32|LR130555|CRISPRCasFinder,CRT matches to NZ_CP016727 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence) position: , mismatch: 9, identity: 0.719

aatatttacttggatgcgtcggacattgaatc	CRISPR spacer
tttcatgacttgaatgcgtaggacattgaaag	Protospacer
  *  * *****.****** **********  

45. spacer 1.20|1162685|32|LR130555|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 9, identity: 0.719

tcaacgaaaacgcagagcgaggaacggatatt	CRISPR spacer
aagagcaaaacggagagcgagaaacggatttc	Protospacer
  .*  ****** ********.******* *.

46. spacer 1.20|1162685|32|LR130555|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 9, identity: 0.719

tcaacgaaaacgcagagcgaggaacggatatt	CRISPR spacer
aagagcaaaacggagagcgagaaacggatttc	Protospacer
  .*  ****** ********.******* *.

47. spacer 1.31|1162256|34|LR130555|PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.735

gcgggagccagtgctaacgatatcgcggccgcgc	CRISPR spacer
cggcgcggcagcgcgaacgatatcgcggccgccg	Protospacer
  * * * ***.** *****************  

48. spacer 1.36|1162562|33|LR130555|PILER-CR matches to MN855615 (Siphoviridae sp. isolate 320, complete genome) position: , mismatch: 9, identity: 0.727

ggccgcgtacatcaacgcagcagcaagcgcata	CRISPR spacer
accactgcccatcaaagcaccagcaagcgcata	Protospacer
. *  .*. ****** *** *************

49. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
tcgaccggcatcgcgcagttcgtcgctgagag	Protospacer
.****** ********* *******   .  *

50. spacer 2.3|1188505|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.719

ccgaccgccatcgcgcatttcgtcgaacgtcg	CRISPR spacer
gagaccggcatcgcgcatttcctcgagcacat	Protospacer
  ***** ************* ****.*..  

51. spacer 2.5|1188627|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

caacattttccaatatcacccagcaatcaatt	CRISPR spacer
gattgccttccaatatcagccagctatcaaat	Protospacer
 * ....*********** ***** ***** *

52. spacer 2.7|1188749|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MT446414 (UNVERIFIED: Escherichia virus TH43, complete genome) position: , mismatch: 9, identity: 0.719

atttcattaattttgcagagaagtgtctcgaa	CRISPR spacer
atttcatcaactttgcagagaaggaaatttat	Protospacer
*******.**.************ .  *. * 

53. spacer 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 9, identity: 0.719

gcgtaagaaaacaattttttcagaaaactaac	CRISPR spacer
aaataagaaaacaattttttcttaaaaaagat	Protospacer
. .******************  ****  .*.

54. spacer 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012534 (Psychrobacter sp. P11G5 plasmid pPspP11G5a, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtaagaaaacaattttttcag---aaaactaac	CRISPR spacer
gcgtaagaaaacagtttttccagttccagatg---	Protospacer
*************.*****.***    *.*.    

55. spacer 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
ggggatatctataaactcacctcgtttatatt	Protospacer
 . ..* **.*****.*************** 

56. spacer 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

57. spacer 2.10|1188932|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

58. spacer 5.1|3252786|32|LR130555|CRISPRCasFinder matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

59. spacer 5.1|3252786|32|LR130555|CRISPRCasFinder matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

60. spacer 5.1|3252786|32|LR130555|CRISPRCasFinder matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

61. spacer 5.3|3252794|32|LR130555|PILER-CR matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

62. spacer 5.3|3252794|32|LR130555|PILER-CR matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

63. spacer 5.3|3252794|32|LR130555|PILER-CR matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

64. spacer 1.8|1161951|32|LR130555|CRISPRCasFinder,CRT matches to NC_004929 (Ruegeria sp. PR1b plasmid pSD20, complete sequence) position: , mismatch: 10, identity: 0.688

cccagccagcgcccggcgcgcctctttaacct	CRISPR spacer
ccccgcctgcgcccggcgcgcctgccagaggg	Protospacer
*** *** *************** .. .*   

65. spacer 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX711616 (Bacillus subtilis strain 72 plasmid pBS72, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtaagaaaacaattttttcagaaaactaac	CRISPR spacer
gacaaagaaaacaatcttttaagaaaagcttt	Protospacer
*   ***********.**** ****** .  .

66. spacer 2.9|1188871|32|LR130555|PILER-CR,CRISPRCasFinder,CRT matches to NC_023026 (Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence) position: , mismatch: 11, identity: 0.656

gcgtaagaaaacaattttttcagaaaactaac	CRISPR spacer
acgaaagaaaacaactttttcagagtggcgtt	Protospacer
.** **********.*********. . .. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage