Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134092 Escherichia coli strain NCTC10444 genome assembly, chromosome: 1 6 crisprs csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14j,c2c9_V-U4,DEDDh,DinG,RT,PrimPol,WYL 0 18 13 0

Results visualization

1. LR134092
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134092_1 1142689-1143449 Unclear I-E
12 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134092_2 1169149-1169970 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134092_3 1691351-1691468 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134092_4 2383703-2383826 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134092_6 3399377-3399525 Orphan I-F
2 spacers
PrimPol

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134092_8 4663797-4663946 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134092_2 2.10|1169727|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169727-1169758 32 MN856003 Bacteriophage sp. isolate 1, complete genome 43533-43564 1 0.969
LR134092_5 5.1|3171882|40|LR134092|CRISPRCasFinder 3171882-3171921 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
LR134092_4 4.1|2383746|38|LR134092|CRISPRCasFinder 2383746-2383783 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
LR134092_1 1.13|1143328|29|LR134092|PILER-CR 1143328-1143356 29 MN234221 Arthrobacter phage Shepard, complete genome 19023-19051 5 0.828
LR134092_1 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142779-1142810 32 NC_048766 Pantoea phage vB_PagM_AAM37, complete genome 4684-4715 6 0.812
LR134092_1 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142779-1142810 32 MK095606 Pantoea phage vB_PagS_AAS23, complete genome 1556-1587 7 0.781
LR134092_1 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142779-1142810 32 MG732930 Enterobacter phage Ec_L1, complete genome 26019-26050 7 0.781
LR134092_1 1.3|1142840|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142840-1142871 32 NZ_CP045223 Achromobacter xylosoxidans strain DN002 plasmid unnamed 184789-184820 7 0.781
LR134092_1 1.7|1143084|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1143084-1143115 32 AJ564013 Bacteriophage PY54 complete genome 41559-41590 7 0.781
LR134092_1 1.7|1143084|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1143084-1143115 32 NC_005069 Yersinia phage PY54, complete genome 41559-41590 7 0.781
LR134092_1 1.14|1143389|29|LR134092|PILER-CR 1143389-1143417 29 KX397366 Erwinia phage vB_EamM_ChrisDB, complete genome 18704-18732 7 0.759
LR134092_1 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142779-1142810 32 JN022534 Xanthomonas phage vB_XveM_DIBBI, complete genome 4380-4411 8 0.75
LR134092_1 1.3|1142840|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142840-1142871 32 NC_031068 Pectobacterium phage PP16, complete genome 34801-34832 8 0.75
LR134092_1 1.3|1142840|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142840-1142871 32 MN271656 Pectobacterium phage MA2, complete genome 32877-32908 8 0.75
LR134092_1 1.11|1143328|32|LR134092|CRISPRCasFinder,CRT 1143328-1143359 32 MN234221 Arthrobacter phage Shepard, complete genome 19023-19054 8 0.75
LR134092_2 2.3|1169300|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169300-1169331 32 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 330699-330730 8 0.75
LR134092_2 2.6|1169483|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169483-1169514 32 MH617380 Microviridae sp. isolate ctcc639, complete genome 3153-3184 8 0.75
LR134092_2 2.8|1169605|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169605-1169636 32 NZ_CP021170 Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence 47960-47991 8 0.75
LR134092_2 2.10|1169727|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169727-1169758 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 44158-44189 8 0.75
LR134092_2 2.10|1169727|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169727-1169758 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 7316-7347 8 0.75
LR134092_2 2.12|1169849|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169849-1169880 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 286581-286612 8 0.75
LR134092_2 2.12|1169849|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169849-1169880 32 NZ_CP021128 Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence 236585-236616 8 0.75
LR134092_2 2.12|1169849|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169849-1169880 32 CP007645 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence 293180-293211 8 0.75
LR134092_1 1.9|1143206|32|LR134092|CRISPRCasFinder,CRT 1143206-1143237 32 MG592655 Vibrio phage 1.285.O._10N.286.55.C12, partial genome 34288-34319 9 0.719
LR134092_1 1.9|1143206|32|LR134092|CRISPRCasFinder,CRT 1143206-1143237 32 MG592463 Vibrio phage 1.088.O._10N.261.46.A1, partial genome 30703-30734 9 0.719
LR134092_1 1.14|1143389|29|LR134092|PILER-CR 1143389-1143417 29 AP013817 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S44-C148, *** SEQUENCING IN PROGRESS *** 4607-4635 9 0.69
LR134092_1 1.14|1143389|29|LR134092|PILER-CR 1143389-1143417 29 AP013815 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S43-C158, *** SEQUENCING IN PROGRESS *** 9935-9963 9 0.69
LR134092_1 1.14|1143389|29|LR134092|PILER-CR 1143389-1143417 29 AP013820 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S46-C98, *** SEQUENCING IN PROGRESS *** 20842-20870 9 0.69
LR134092_2 2.3|1169300|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169300-1169331 32 NZ_LR723676 Rhizobium sp. TCK plasmid 2 135297-135328 9 0.719
LR134092_2 2.8|1169605|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169605-1169636 32 NZ_KU254577 Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence 224437-224468 9 0.719
LR134092_6 6.1|3399405|32|LR134092|CRISPRCasFinder 3399405-3399436 32 NZ_CP045060 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence 9736-9767 9 0.719
LR134092_6 6.1|3399405|32|LR134092|CRISPRCasFinder 3399405-3399436 32 NZ_CP045053 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence 9737-9768 9 0.719
LR134092_6 6.1|3399405|32|LR134092|CRISPRCasFinder 3399405-3399436 32 NZ_CP045057 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence 9736-9767 9 0.719
LR134092_6 6.3|3399418|32|LR134092|PILER-CR 3399418-3399449 32 NZ_CP045060 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence 9736-9767 9 0.719
LR134092_6 6.3|3399418|32|LR134092|PILER-CR 3399418-3399449 32 NZ_CP045053 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence 9737-9768 9 0.719
LR134092_6 6.3|3399418|32|LR134092|PILER-CR 3399418-3399449 32 NZ_CP045057 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence 9736-9767 9 0.719
LR134092_1 1.5|1142962|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1142962-1142993 32 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 249091-249122 10 0.688
LR134092_1 1.12|1143389|32|LR134092|CRISPRCasFinder,CRT 1143389-1143420 32 KX397366 Erwinia phage vB_EamM_ChrisDB, complete genome 18704-18735 10 0.688
LR134092_2 2.8|1169605|32|LR134092|PILER-CR,CRISPRCasFinder,CRT 1169605-1169636 32 NZ_CP010826 Thermus aquaticus Y51MC23 plasmid pTA78, complete sequence 18642-18673 10 0.688

1. spacer 2.10|1169727|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 1, identity: 0.969

cgtactgcttactccgtcatcgatgtatgagt	CRISPR spacer
cgtgctgcttactccgtcatcgatgtatgagt	Protospacer
***.****************************

2. spacer 5.1|3171882|40|LR134092|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcggatcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
*********.******************************

3. spacer 4.1|2383746|38|LR134092|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

4. spacer 1.13|1143328|29|LR134092|PILER-CR matches to MN234221 (Arthrobacter phage Shepard, complete genome) position: , mismatch: 5, identity: 0.828

agcgtttgctccgggtggaataaccctgg	CRISPR spacer
aaagggtgatccgggtggaataaccctgg	Protospacer
*. *  ** ********************

5. spacer 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NC_048766 (Pantoea phage vB_PagM_AAM37, complete genome) position: , mismatch: 6, identity: 0.812

gaataccgattcataacggcgga-aatgtggat	CRISPR spacer
gaataccgattcatcacggcggataccgcgca-	Protospacer
************** ******** * .*.* * 

6. spacer 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to MK095606 (Pantoea phage vB_PagS_AAS23, complete genome) position: , mismatch: 7, identity: 0.781

gaataccgattcataacggcgga-aatgtggat	CRISPR spacer
gattaccgattcataacggcggataccgccca-	Protospacer
** ******************** * .*.  * 

7. spacer 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to MG732930 (Enterobacter phage Ec_L1, complete genome) position: , mismatch: 7, identity: 0.781

gaataccgattcataacggcggaaatgtggat--	CRISPR spacer
gagtaccgattcataacggcgg--ataccgctca	Protospacer
**.*******************  **.. * *  

8. spacer 1.3|1142840|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 7, identity: 0.781

acgaaaaacaggctgcaagtctcg--ctgaccaa	CRISPR spacer
tcgaaaaacagcgtgcaagtctcgatctcgcc--	Protospacer
 **********  ***********  ** .**  

9. spacer 1.7|1143084|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to AJ564013 (Bacteriophage PY54 complete genome) position: , mismatch: 7, identity: 0.781

gtcgctggaacggggcgaataaagaggggctc	CRISPR spacer
gccgctggaaaggggcgagtaaagagtctttc	Protospacer
*.******** *******.*******   .**

10. spacer 1.7|1143084|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NC_005069 (Yersinia phage PY54, complete genome) position: , mismatch: 7, identity: 0.781

gtcgctggaacggggcgaataaagaggggctc	CRISPR spacer
gccgctggaaaggggcgagtaaagagtctttc	Protospacer
*.******** *******.*******   .**

11. spacer 1.14|1143389|29|LR134092|PILER-CR matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 7, identity: 0.759

tttgctggaacccaaaactcagcgcacag	CRISPR spacer
tgagctggaatccaaagctcagcgcatct	Protospacer
*  *******.*****.*********.  

12. spacer 1.2|1142779|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to JN022534 (Xanthomonas phage vB_XveM_DIBBI, complete genome) position: , mismatch: 8, identity: 0.75

gaataccgattcataacggcggaaatgtggat--	CRISPR spacer
gagtaccgattcatcacggcgg--ataccgctca	Protospacer
**.*********** *******  **.. * *  

13. spacer 1.3|1142840|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NC_031068 (Pectobacterium phage PP16, complete genome) position: , mismatch: 8, identity: 0.75

acgaaaaacaggctgcaagtctcgctgaccaa	CRISPR spacer
acggcgccaaggctgctactctcgctgaccaa	Protospacer
***. .   ******* * *************

14. spacer 1.3|1142840|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to MN271656 (Pectobacterium phage MA2, complete genome) position: , mismatch: 8, identity: 0.75

acgaaaaacaggctgcaagtctcgctgaccaa	CRISPR spacer
acggcgccaaggctgctactctcgctgaccaa	Protospacer
***. .   ******* * *************

15. spacer 1.11|1143328|32|LR134092|CRISPRCasFinder,CRT matches to MN234221 (Arthrobacter phage Shepard, complete genome) position: , mismatch: 8, identity: 0.75

agcgtttgctccgggtggaataaccctggcgg	CRISPR spacer
aaagggtgatccgggtggaataaccctgggaa	Protospacer
*. *  ** ******************** ..

16. spacer 2.3|1169300|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

--aactccaggatattgcaaaccgcatagtggat	CRISPR spacer
gcgacgtc--gatattgcaactcgcatagtggac	Protospacer
  .** .*  ********** .***********.

17. spacer 2.6|1169483|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to MH617380 (Microviridae sp. isolate ctcc639, complete genome) position: , mismatch: 8, identity: 0.75

attacgacttccgcacgcacccaccgtttgta	CRISPR spacer
attacgacatccgcacgcccccacgtggtaca	Protospacer
******** ********* *****    *..*

18. spacer 2.8|1169605|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021170 (Paenibacillus bovis strain BD3526 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtttctggcgggggtagggaacgcccagaa	CRISPR spacer
atgctgcgggctggggtagggaacgctcagat	Protospacer
..*.* * *** **************.**** 

19. spacer 2.10|1169727|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 8, identity: 0.75

cgtactgc-ttactccgtcatcgatgtatgagt	CRISPR spacer
-taacaacattacgtcgtcatcgatgtatgagg	Protospacer
   ** .* **** .***************** 

20. spacer 2.10|1169727|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 8, identity: 0.75

cgtactgc-ttactccgtcatcgatgtatgagt	CRISPR spacer
-taacaacattacgtcgtcatcgatgtatgagg	Protospacer
   ** .* **** .***************** 

21. spacer 2.12|1169849|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgtc----cagtgatgctttctggtgctcgaata	CRISPR spacer
----tcacatcagtgatgctttttggtgctcgacgg	Protospacer
    **    ************.**********  .

22. spacer 2.12|1169849|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021128 (Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgtc----cagtgatgctttctggtgctcgaata	CRISPR spacer
----tcacatcagtgatgctttttggtgctcgacgg	Protospacer
    **    ************.**********  .

23. spacer 2.12|1169849|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgtc----cagtgatgctttctggtgctcgaata	CRISPR spacer
----tcacatcagtgatgctttttggtgctcgacgg	Protospacer
    **    ************.**********  .

24. spacer 1.9|1143206|32|LR134092|CRISPRCasFinder,CRT matches to MG592655 (Vibrio phage 1.285.O._10N.286.55.C12, partial genome) position: , mismatch: 9, identity: 0.719

tatgattcacgaattacaggaaaccagccgcc	CRISPR spacer
tatgattgacgaattaaaggaaattgaacgag	Protospacer
******* ******** ******.... **  

25. spacer 1.9|1143206|32|LR134092|CRISPRCasFinder,CRT matches to MG592463 (Vibrio phage 1.088.O._10N.261.46.A1, partial genome) position: , mismatch: 9, identity: 0.719

tatgattcacgaattacaggaaaccagccgcc	CRISPR spacer
tatgattgacgaattaaaggaaattgaacgag	Protospacer
******* ******** ******.... **  

26. spacer 1.14|1143389|29|LR134092|PILER-CR matches to AP013817 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S44-C148, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.69

tttgctggaacccaaaactcagcgcacag	CRISPR spacer
tttgctggaatccaaaactcataagttgt	Protospacer
**********.**********  .  .. 

27. spacer 1.14|1143389|29|LR134092|PILER-CR matches to AP013815 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S43-C158, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.69

tttgctggaacccaaaactcagcgcacag	CRISPR spacer
tttgctggaatccaaaactcataagttgt	Protospacer
**********.**********  .  .. 

28. spacer 1.14|1143389|29|LR134092|PILER-CR matches to AP013820 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S46-C98, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.69

tttgctggaacccaaaactcagcgcacag	CRISPR spacer
tttgctggaatccaaaactcataagttgt	Protospacer
**********.**********  .  .. 

29. spacer 2.3|1169300|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR723676 (Rhizobium sp. TCK plasmid 2) position: , mismatch: 9, identity: 0.719

aactccaggatattgcaaaccgcatagtggat	CRISPR spacer
tcctccaggatattggcaaccgcatggatcag	Protospacer
  *************  ********.*   * 

30. spacer 2.8|1169605|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU254577 (Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtttctggcgggggtagggaacgcccagaa	CRISPR spacer
gagggtctggcgggggtagggaagtccccagg	Protospacer
* *  ******************  *** ...

31. spacer 6.1|3399405|32|LR134092|CRISPRCasFinder matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

32. spacer 6.1|3399405|32|LR134092|CRISPRCasFinder matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

33. spacer 6.1|3399405|32|LR134092|CRISPRCasFinder matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

34. spacer 6.3|3399418|32|LR134092|PILER-CR matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

35. spacer 6.3|3399418|32|LR134092|PILER-CR matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

36. spacer 6.3|3399418|32|LR134092|PILER-CR matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgggcgggtggagtatgttaccagtgaa	CRISPR spacer
acaccgggcgggtggaacatgttaccaggaca	Protospacer
*.. .***********..********** . *

37. spacer 1.5|1142962|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

agtgaggcaatcaaatgacccgcccgcaatta	CRISPR spacer
agtgaggccataaaatgacccgccgagtggcc	Protospacer
******** ** ************ .  . . 

38. spacer 1.12|1143389|32|LR134092|CRISPRCasFinder,CRT matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 10, identity: 0.688

tttgctggaacccaaaactcagcgcacaggtt	CRISPR spacer
tgagctggaatccaaagctcagcgcatctacc	Protospacer
*  *******.*****.*********.  ...

39. spacer 2.8|1169605|32|LR134092|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010826 (Thermus aquaticus Y51MC23 plasmid pTA78, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtttctggcgggggtagggaacgcccagaa	CRISPR spacer
agctttatggcgggggtaaggaacgctgattc	Protospacer
.  *** ***********.*******. *   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 824263 : 874430 38 Escherichia_phage(30.77%) transposase NA
DBSCAN-SWA_2 1449288 : 1503110 56 Bacillus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_3 1538318 : 1595169 52 Shigella_phage(20.0%) integrase,transposase attL 1525623:1525639|attR 1586618:1586634
DBSCAN-SWA_4 1830221 : 1839666 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_5 1934109 : 1944456 11 Enterobacteria_phage(30.0%) transposase NA
DBSCAN-SWA_6 1995565 : 2085151 79 Escherichia_phage(45.24%) protease,capsid,tail,head,integrase,portal,terminase,transposase attL 1993938:1993954|attR 2074644:2074660
DBSCAN-SWA_7 2457408 : 2520760 69 Enterobacteria_phage(39.13%) protease,lysis,portal,tail,integrase,head,terminase,transposase attL 2486040:2486055|attR 2489356:2489371
DBSCAN-SWA_8 2716022 : 2769246 60 Escherichia_phage(53.33%) tRNA,lysis,coat,tail,integrase,terminase attL 2707194:2707209|attR 2768407:2768422
DBSCAN-SWA_9 3091728 : 3127160 25 Saccharomonospora_phage(33.33%) transposase NA
DBSCAN-SWA_10 3297022 : 3357231 59 Escherichia_phage(15.79%) tRNA,transposase NA
DBSCAN-SWA_11 3753264 : 3809160 67 Enterobacteria_phage(61.54%) protease,lysis,capsid,portal,tRNA,coat,tail,integrase,head,terminase attL 3752796:3752842|attR 3798963:3799009
DBSCAN-SWA_12 3846744 : 3935487 60 Bacillus_phage(33.33%) protease,tRNA,transposase NA
DBSCAN-SWA_13 4536977 : 4667412 106 Shigella_phage(26.67%) tRNA,integrase,transposase attL 4572767:4572784|attR 4651717:4651734
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage