CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134138	Kluyvera intermedia strain NCTC12125 genome assembly, chromosome: 1	3 crisprs	DEDDh,DinG,csa3,cas3,cas14j,PD-DExK	0	0	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134138_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134138_1

2431671-2431775

Orphan

Consensus_repeat	Method
ACTATCCCGCAATCAGCATAAATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134138_1

>merge|LR134138|1|2431671-2431775|CRISPRCasFinder
ACTATCCCGCAATCAGCATAAATGCCTCACCAGCCAACAAATATGCCCGAATGTAGCCCGGCCAAGCGCAGCGCCGCCGGGACTATCCCGCAATCAGCATAAATG

>LR134138|1|1|2431671-2431775|CRISPRCasFinder
ACTATCCCGCAATCAGCATAAATG	CCTCACCAGCCAACAAATATGCCCGAATGTAGCCCGGCCAAGCGCAGCGCCGCCGGG
ACTATCCCGCAATCAGCATAAATG

Protein	Signature genes	Signature genes Name	Protein_function
LR134138.1\|VDZ84560.1\|2436401_2437814_-\|Lysine-specific-permease	unknown	unknown	gnl\|CDD\|236904
LR134138.1\|VDZ84558.1\|2434285_2435251_-\|Sulfate-starvation-induced-protein-1	unknown	unknown	gnl\|CDD\|183158
LR134138.1\|VDZ84547.1\|2420885_2421992_-\|Protein-of-uncharacterised-function-(DUF1615)	unknown	unknown	gnl\|CDD\|369501
LR134138.1\|VDZ84549.1\|2423572_2424739_+\|D-alanyl-D-alanine--carboxypeptidase/endopeptidaseAmpH-precursor	unknown	unknown	gnl\|CDD\|236732
LR134138.1\|VDZ84562.1\|2438498_2439620_-\|Cupin-superfamily-protein	unknown	unknown	gnl\|CDD\|225406
LR134138.1\|VDZ84550.1\|2424735_2425362_-\|putative-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183332
LR134138.1\|VDZ84556.1\|2432683_2433511_-\|Putative-aliphatic-sulfonates-transport-permease-protein-ssuC	unknown	unknown	gnl\|CDD\|182276
LR134138.1\|VDZ84548.1\|2422024_2423248_-\|microcin-B17-transporter	unknown	unknown	gnl\|CDD\|182960
LR134138.1\|VDZ84563.1\|2439751_2441056_-\|Bacteriophytochrome-cph2	unknown	unknown	gnl\|CDD\|143635
LR134138.1\|VDZ84561.1\|2437910_2438462_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134138.1\|VDZ84559.1\|2435482_2436415_-\|Homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|181899
LR134138.1\|VDZ84555.1\|2431835_2432687_-\|Alpha-ketoglutarate-dependent-taurine-dioxygenase	unknown	unknown	gnl\|CDD\|181947
LR134138.1\|VDZ84564.1\|2441210_2441423_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134138.1\|VDZ84546.1\|2420586_2420889_+\|Inner-membrane-protein-yaiY	unknown	unknown	gnl\|CDD\|371313
LR134138.1\|VDZ84552.1\|2428825_2429800_+\|Delta-aminolevulinic-acid-dehydratase	unknown	unknown	gnl\|CDD\|236450
LR134138.1\|VDZ84551.1\|2425455_2428293_-\|P.93	unknown	unknown	gnl\|CDD\|273608
LR134138.1\|VDZ84545.1\|2420168_2420363_-\|Protein-of-uncharacterised-function-(DUF2754)	unknown	unknown	gnl\|CDD\|313999
LR134138.1\|VDZ84553.1\|2429971_2430238_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|153248
LR134138.1\|VDZ84557.1\|2433507_2434275_-\|Bicarbonate-transport-ATP-binding-protein-CmpD	unknown	unknown	gnl\|CDD\|183056
LR134138.1\|VDZ84544.1\|2419039_2420140_+\|D-alanine--D-alanine-ligase-A	unknown	unknown	gnl\|CDD\|234993

Protein	Function_ID	Function_description	E-value
LR134138.1\|VDZ84560.1\|2436401_2437814_-\|Lysine-specific-permease	gnl\|CDD\|236904	PRK11387, PRK11387, S-methylmethionine permease.	0
LR134138.1\|VDZ84558.1\|2434285_2435251_-\|Sulfate-starvation-induced-protein-1	gnl\|CDD\|183158	PRK11480, tauA, taurine transporter substrate binding subunit; Provisional.	0
LR134138.1\|VDZ84547.1\|2420885_2421992_-\|Protein-of-uncharacterised-function-(DUF1615)	gnl\|CDD\|369501	pfam07759, DUF1615, Protein of unknown function (DUF1615). This is a family of proteins of unknown function expressed by various bacterial species. Some members of this family are thought to be lipoproteins. Another member of this family is thought to be involved in photosynthesis.	0
LR134138.1\|VDZ84549.1\|2423572_2424739_+\|D-alanyl-D-alanine--carboxypeptidase/endopeptidaseAmpH-precursor	gnl\|CDD\|236732	PRK10662, PRK10662, beta-lactam binding protein AmpH; Provisional.	0
LR134138.1\|VDZ84562.1\|2438498_2439620_-\|Cupin-superfamily-protein	gnl\|CDD\|225406	COG2850, COG2850, Uncharacterized conserved protein [Function unknown].	4.42229e-156
LR134138.1\|VDZ84550.1\|2424735_2425362_-\|putative-DNA-binding-transcriptional-regulator	gnl\|CDD\|183332	PRK11832, PRK11832, hydrogen peroxide resistance inhibitor IprA.	6.2998e-86
LR134138.1\|VDZ84556.1\|2432683_2433511_-\|Putative-aliphatic-sulfonates-transport-permease-protein-ssuC	gnl\|CDD\|182276	PRK10160, PRK10160, taurine ABC transporter permease TauC.	3.29112e-165
LR134138.1\|VDZ84548.1\|2422024_2423248_-\|microcin-B17-transporter	gnl\|CDD\|182960	PRK11098, PRK11098, peptide antibiotic transporter SbmA.	0
LR134138.1\|VDZ84563.1\|2439751_2441056_-\|Bacteriophytochrome-cph2	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.50478e-63
LR134138.1\|VDZ84559.1\|2435482_2436415_-\|Homocysteine-S-methyltransferase	gnl\|CDD\|181899	PRK09485, mmuM, homocysteine methyltransferase; Provisional.	0
LR134138.1\|VDZ84555.1\|2431835_2432687_-\|Alpha-ketoglutarate-dependent-taurine-dioxygenase	gnl\|CDD\|181947	PRK09553, tauD, taurine dioxygenase; Reviewed.	0
LR134138.1\|VDZ84546.1\|2420586_2420889_+\|Inner-membrane-protein-yaiY	gnl\|CDD\|371313	pfam10954, DUF2755, Protein of unknown function (DUF2755). Some members in this family of proteins are annotated as YaiY however no function is known. The family appears to be restricted to Enterobacteriaceae.	2.34515e-46
LR134138.1\|VDZ84552.1\|2428825_2429800_+\|Delta-aminolevulinic-acid-dehydratase	gnl\|CDD\|236450	PRK09283, PRK09283, porphobilinogen synthase.	0
LR134138.1\|VDZ84551.1\|2425455_2428293_-\|P.93	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	2.46386e-63
LR134138.1\|VDZ84545.1\|2420168_2420363_-\|Protein-of-uncharacterised-function-(DUF2754)	gnl\|CDD\|313999	pfam10953, DUF2754, Protein of unknown function (DUF2754). This family of proteins with unknown function appear to be restricted to Enterobacteriaceae.	6.85844e-34
LR134138.1\|VDZ84553.1\|2429971_2430238_+\|Uncharacterised-protein	gnl\|CDD\|153248	cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.	2.99853e-07
LR134138.1\|VDZ84557.1\|2433507_2434275_-\|Bicarbonate-transport-ATP-binding-protein-CmpD	gnl\|CDD\|183056	PRK11248, tauB, taurine ABC transporter ATP-binding subunit.	0
LR134138.1\|VDZ84544.1\|2419039_2420140_+\|D-alanine--D-alanine-ligase-A	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0

>LR134138.1|VDZ84553.1|2429971_2430238_+|Uncharacterised-protein
MFSLDTVIDDLWPQARPTPWQKKILKRLMHEEEFQQFAARHSHLKGLDTVEQILEHLNIHCAIPVHCLEQIPEHGPLVIIANHPYRHA
>LR134138.1|VDZ84552.1|2428825_2429800_+|Delta-aminolevulinic-acid-dehydratase
MTDLIHRPRRLRQSPALRAMFEETTLSLNDLVLPIFVEEEVNDYKAIEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHLDSTGSDAWKEDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCDHGVDNDLTLANLGKQAVIAAAAGADFIAPSAAMDGQVQAIRQALDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDILRDIRERTELPIGAYQVSGEYAMIKFAAQAGAIDEEKVVLESLGAIKRAGADLIFSYFALDLAEKKILR
>LR134138.1|VDZ84551.1|2425455_2428293_-|P.93
MHSWKKKLVVSQLALACTLAIASQANATTYDTFGYHDDASTAFSWNDWTNADHTDYVSYYGYVYDNAADGDYDNNFNGDVVNGVLSTYYLNNDYTDSTDNTLTVKNSTIHGMITSQKVYDHEGYGWTNGTDVDYTWHDGDVFTLNVANSTIDDDYEYFYFSDNYLDADGKAKSEDYRTADYAYLGSAVTLDVESNINITDNSRVAGIALSQGDTSNVDYTIDAHTWDNNIVVTDSTVTSGSYTPLENTGFYGNSEEPSDYNGDGSANDVALSFNDSSASNYAMKNNVAFSNSTLTGDVVFSSTWNANFYPNGKYDDNGDFLSTNGGWADDSLNVDELNITLDNGSKWTGAAVFSYNAIGTADMYDVAVNSLEPNSTYDKWGNVVDDQTFQSGVLNVALNNGSQWNTVNASNIDTLTVNNGSQVDVANGSSLLSDSITLTNGSAMNLSSGGQVATDHLTVDSYSTVDLNNETAYLYANTITVSNGGEFSIGAGAYEANAFGTDTMELTNGGVFNINSSDYVLDADLVNGHTNTTDKSNATYGYGVIAMNSDGHLTVNGNGNTNNSDQEFSVDDTADNVVAASGNYKVRINNSTGEGHISDYKGKELIYVNDANSTATFSAANRADLGAYTYQAQQEGNTVVLRQMELTDYANMALSIPSANTNVWNLQQDTLNTRLNSARHGLQDNGGAWVSYFGGSFNGDNGTISYDQDVNGIMVGLDTKVDGNNANWIVGAAAGFAKGDMSDGSGQVDQDSQSAYIYSSARFANNIFFDSNLSYSRFNNDLTATMSNGDYVDGDTTADAWGFGMKLGYDLKLNDAGYVTPYGAVSGLFQSGDSYRLSNSMKVGDQDYDSLRYELGVDAGYTFNFGDQAMTPYFKLAYVYDDSNNDSNINGDNIDNGVEGSAVRVGAGSQFSFTKNFSAYTGVNYVGGGDVDQDWAANAGVKYTW
>LR134138.1|VDZ84550.1|2424735_2425362_-|putative-DNA-binding-transcriptional-regulator
MPHLSKPLSEFFTLDKKLSQQGTRFTLTAGEAFIPPDGAFNDITIVIQHGAVSLHRNESNMLYGIVQNPAIFGLAAAVNKIKNDYMLIAETECRGYYLPAVDTLHCLERYHLWREAFYWMTWQTRMLELRDKQLIGTNHYHQIRSTLLMMMAWDERIRTRIGVLNFIQQRTRISRSVIAEVLSALRKGDYIKMEKGKLVGITRLPYDY
>LR134138.1|VDZ84549.1|2423572_2424739_+|D-alanyl-D-alanine--carboxypeptidase/endopeptidaseAmpH-precursor
MPPLKRSLLFSAVLCAVSLTSVQAAQPLTTPTFASDIVDRYANHIYYGSGATGMALVVIDGNQRVFRSFGETRPGNNVHPQLDSVIRIASLSKLMTSEMLVKLLDQGVVKLNDPLSKYAPANARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTQSQRWSYLSTAKLRVAPGSQASYSNLAFDLLADALGNAAGKPYPKLFEEQIARPLGMKDTTFTPSPDQCGRLMVAEKGASPCNNTLAAMGSGGVYSTPGDMMRWMQQYLSSDFYHRSNQADRMQTLVYKRSQLTRVIGMDVPGHADALGLGWVYMAPKNGRPGIIQKTGGGGGFITYMAMIPQSNVGAFVVITRSPLTRFVNMSDGINDLVTELSGNKAAIIPAS
>LR134138.1|VDZ84548.1|2422024_2423248_-|microcin-B17-transporter
MFKSFFPKPGPFFLSVFIWALVAVIFWQAGGGSWLLHIAVAGNDVPISARRFWSLNYLVFYAYYLVCVALFAGYWFIRSPHRWQYWSILGTALIIFVTWFMVEVGVAINAWYAPFYDLIQTALASPNKVSINQFYQEIGIFLGIALIAVVIGVLNNFFVSHYVFRWRTAMNEYYTAHWQQLRHIEGAAQRVQEDTMRFASTLEDMGTSFINAIMTLIAFLPVLVTLSAHVPNLPIIGHVPYGLVIAAIVWSLMGTGLLAVVGIKLPGLNFKNQRVEAAYRKELVYGEDDANRATPPTLRELFSAVRQNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFGQVRGSFQYLISSWTTLVELMSIYKRLRSFERELDNKDLQDEIVQPQS
>LR134138.1|VDZ84547.1|2420885_2421992_-|Protein-of-uncharacterised-function-(DUF1615)
MAIAVTRYRSLPLALLAGALLSACTSQQAPQMKAGEKPVDVASVVRQKMPASVKDKEAWAQALAKTFDSQKLAPTEENICSVLAVAQQESNYRADPAVPGLSKIAWQEIDRRAEKMHIPVFLVHTALKINSPNGKSYSERLDNVKTEKQLSAIFDDFIDMVPMGQKLFGSLNPVHTGGPMQVSIAFAEDHQDNYPWKMDGTVRQEVFTLRGGLWFGTYHLLNYPANYSAPIYRFADFNAGWYASRNAAFQYAVSKATGVKLALDGDVVLYGSDKPGSTETAVRKLASKLSMSDAEIHRQLRQGDSLAFEKTALYKGVYKIAEQKAGKPLAREMLPGIQLESPKITRKLTTAWFAKRVDERRAKCMALN
>LR134138.1|VDZ84546.1|2420586_2420889_+|Inner-membrane-protein-yaiY
MTDFTLSKLMFSKKKGTSSTSGNLAYALFVLLCFSVGAQLLTLVLHAPGVYEHLMQMQDTGRPRVEMGLGVGTLFGVVPFLAGCAILGIVSLMRRLRHHD
>LR134138.1|VDZ84545.1|2420168_2420363_-|Protein-of-uncharacterised-function-(DUF2754)
MNLPAKIRRDWHYYAFAIGLIFILNGIVGLLGFEAKGWQTYAVGMVTWVISFWLAGFIIRRQET
>LR134138.1|VDZ84544.1|2419039_2420140_+|D-alanine--D-alanine-ligase-A
MAKLRVGIVFGGKSAEHEVSLQSAKNIVEAIDKTRFDVVLLGIDKQGQWHISDAQNYLFNAEDPARIALRPSDTTLAHIPGKEHQQMIDASSGKPLEAIDVIFPIVHGTLGEDGSLQGMLRMANLPFVGSDVLGSAACMDKDVTKRLLRDAGLSIAPFVTLTRRNRDSFTFEEIKTTLGLPLFVKPANQGSSVGVSKVNDAAQYQQAVALAFEFDHKVVVEQGIQGREIECAVLGNDFPQASTCGEIVLNSEFYAYDTKYIDDNGAKVVVPAAISAEVNDKIRQVAVDAYQTLGCCGMARVDVFLTAENDVVINEINTLPGFTNISMYPKLWQASGLDYTSLITRLIELALERHQADKALKTSMNG
>LR134138.1|VDZ84555.1|2431835_2432687_-|Alpha-ketoglutarate-dependent-taurine-dioxygenase
MSERLAITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLREQLISPEQQRALALRFGDLHIHPVYPHAPGVEEIIVLDTHDDNPPDNDNWHTDVTFIDTPPAGAILAAKELPSTGGDTLWTSGIAAYDALSEPFKALLSGLHAEHDFRKSFQEYKYRKTEEEHQRWLDAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVAEKESEALLSFLFAHITKPEFQVRWRWQPNDVAIWDNRVTQHYANADYLPQRRIMHRATILGDKPYYRAG
>LR134138.1|VDZ84556.1|2432683_2433511_-|Putative-aliphatic-sulfonates-transport-permease-protein-ssuC
MSVVINDKPRQRTFKLRWPLSRHLTLSLTTLAVLLAIWWAVTAAALINPLFLPAPGQVLQKLLTIASAQGFMDATLWQHLAASLGRIVVALLAATIVGIPVGIAMGLSPTVRGILDPLIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGANRAQVLWLVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFGLELGLRALQRRLTPWHGEVQ
>LR134138.1|VDZ84557.1|2433507_2434275_-|Bicarbonate-transport-ATP-binding-protein-CmpD
MLQISHLFADYGGKPALADINLTLDSGELLVVLGPSGCGKTTLLNLVAGFVPYQHGSITLDGKRVEGPGADRGVVFQNEGLLPWRNVQDNVALGLQLAGVNKAERRDIAAQMLKKVGLEGAEKRFIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWHETGKKVLLITHDIEEAIFMATELVLLSPGPGRVLERLPLDFARRFIAGEDCRSIKSDPRFIEQREYVLSRVFEQREAFS
>LR134138.1|VDZ84558.1|2434285_2435251_-|Sulfate-starvation-induced-protein-1
MAIASRFTLIAATLALLTFQAQAVDVTIAYQTSAEPAKVAQADNTFEKLSGAKPDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQKVPIEVFLLASQLGNSEALVVKKAITKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVQILNLQPPAIIAAWQRGDIDGAYVWAPAVNELEKDGTVLTDSAKVGEWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQRGYIDNPDKWLAQPENISKLSRLSGVPEADVPGLVKGNTYLTAEQQAQALNGPVNKAIVDTAQFLKEQGKVPDVATDYSQYVTDRFVK
>LR134138.1|VDZ84559.1|2435482_2436415_-|Homocysteine-S-methyltransferase
MPQNNPLTAILAEHPFVLLDGAMATELEARGCDLTDSLWSAKVLMENPQLIYDVHLDYFRAGAQVAITASYQATPDGFAARGLDEAQSRSLIGKSVELARQARESYLAENPTAKGLLIAGSVGPYGAYLADGSEYRGDYQRSAQVFQEFHRPRVEALLEAGVDLLACETLPSFAEIRALAQLLAEYPVAQAWFSFTLRDSQHLSDGTPLCDVLALLADYPQIVAVGVNCIALENTTDALSYLHSQTPLPLVVYPNSGEHYDAVTKTWHHHGEACATLEGYLPQWLAAGAKLIGGCCRTTPKDIAALKAHC
>LR134138.1|VDZ84560.1|2436401_2437814_-|Lysine-specific-permease
MQTTDTTQQGGQLKRTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVWLVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSFTAAGFCMQYWFPQVPVWTWCLLFCVLIFGLNIISTRFFAEGEFWFSLVKVITIIAFIVLGGAAIFGFIPMQDGSPAPGLANITAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETQNPHKVIPVAIRTTIARLIIFFIGTVFVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNERTLPRCFSQLNKNGVPLVALSVSMLGGLLALFSSIVAPDTVFVALSAISGFAVVAVWISICASHFVFRRRHLQQGKALSELHYRAPWYPLVPILGFILCLVACVGLAFDPSQRIALWCGLPFVALCYGAYFLTRSRQTQQEPQHAAE
>LR134138.1|VDZ84561.1|2437910_2438462_+|Uncharacterised-protein
MGDWQQEPLTLTLSPEGRGDRSASFVSGQFSQKPAPLFSLCPKERGDHSASFVSGQFSQKPAPLFSLSPRGARGSFGVVCEWVVQPEACTAFLPLSKGTRRSFSVVCEWAAQPEACAAFLPPPRGARGSFSVVCEWVVQPEACTAFLPLLKGRGDHSASFVSGQLNQKPAPLFSLSLPGRGPG
>LR134138.1|VDZ84562.1|2438498_2439620_-|Cupin-superfamily-protein
MAYQLNLNWPEFLEKYWQKQPVVLKNAFPNFVDPITPDELAGLTMEMEVSSRLVSHDDGVWSASHGPFESFDHLGEKNWSLLAQAVNHWHEPAAELVTPFRVLPDWRLDDLMISFSVPGGGVGPHIDPYDVFIIQGMGRRRWRVGDALPLKQHCPHPALLHVEPFTPIIEVEMEPGDILYIPPGFPHDGFTYEATLNYSVGFRGPNGRELISSFADYVLENDLGEKYYTDPDLTCREHAGKVEDHELERLRTLMIDMIRQPNDFKQWFGSFASTPRHELDIAPAEPPFEPEEVAAALEDGETLRRLNGLRVLNVGGSFFINSERLETCSPQAADVLSRYTVLDKTYFGEALQNPAFIVELTGLINQGYWFFAE
>LR134138.1|VDZ84563.1|2439751_2441056_-|Bacteriophytochrome-cph2
MAMDKQFTRQERDNSARLADLLHHNTDWVWEVDAQSRYVWVSEVVKNQLGYTPEEVLGRTPFDFMAPGETERLKKSFEDILASKQPFSGLINRNLRADGSVVILETSGIPLFDEHGTLTGYRGTDRDISLLGERVLQLESIYQNTPLALCVINRSGQLTRANKAMGELLGETEETLIGKPLAEIVPEWHSLLQQDFILLDSGHQITSQEVFLHGRYFYIKPMPVHDAGGSVAGISAAWMDITDRKLAEEQLASANQTLLQYAERDHLTGLFNRRYMDERLNDEITRAQREGTSLSLCMADIDFFKRYNDTYGHQAGDQVLRSVAEALRGGLRPADCVSRYGGEEFLVILPDTDGEGAQAVAERLRERVQALGIEHESSSIDCMLTISLGVMTWDASRLVCNIQSTGHISAELISSSDAALYRAKQQGRNRVVVA
>LR134138.1|VDZ84564.1|2441210_2441423_+|Uncharacterised-protein
MISIEYLCPDCATVIVISNIEKIKNSQDEYPLKCPACGGHISKDALITFARQKAQAMIDEALSQLKKTVL

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Crispr_ID: LR134138_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134138_2

4473465-4473598

Orphan

Consensus_repeat	Method
TCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134138_2

>merge|LR134138|2|4473465-4473598|CRISPRCasFinder
TCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACAGTCCGTGTGGGTGTTGAGAGTGCTGCTCAATATTTAAAGCCGCACGCAACGGTCCCCTCACCCTAACCCTCTCCTCAAAGGGGCGAGGGGACA

>LR134138|2|2|4473465-4473598|CRISPRCasFinder
TCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACA	GTCCGTGTGGGTGTTGAGAGTGCTGCTCAATATTTAAAGCCGCACGCAACGG
TCCCCTCACCCTAACCCTCTCCTCAAAGGGGCGAGGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
LR134138.1\|VDZ86582.1\|4482595_4483498_-\|Inner-membrane-ABC-transporter-permease-protein-ycjP	unknown	unknown	gnl\|CDD\|223472
LR134138.1\|VDZ86572.1\|4472672_4473389_+\|Oligogalacturonate-specific-porin-kdgM-precursor	unknown	unknown	gnl\|CDD\|368776
LR134138.1\|VDZ86563.1\|4462007_4463354_+\|Nitrilotriacetate-monooxygenase-component-A	unknown	unknown	gnl\|CDD\|274819
LR134138.1\|VDZ86567.1\|4466183_4467848_+\|Malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179979
LR134138.1\|VDZ86577.1\|4477454_4478873_+\|Arabinose-transporter	unknown	unknown	gnl\|CDD\|273317
LR134138.1\|VDZ86570.1\|4470035_4470905_+\|HTH-type-transcriptional-activator-AllS	unknown	unknown	gnl\|CDD\|223656
LR134138.1\|VDZ86573.1\|4473760_4474936_-\|translocation-protein-TolB	unknown	unknown	gnl\|CDD\|291262
LR134138.1\|VDZ86571.1\|4471016_4472201_+\|Acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
LR134138.1\|VDZ86580.1\|4481453_4482341_-\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|226359
LR134138.1\|VDZ86576.1\|4477062_4477218_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134138.1\|VDZ86566.1\|4465218_4465989_+\|Aliphatic-sulfonates-import-ATP-binding-protein-SsuB	unknown	unknown	gnl\|CDD\|224041
LR134138.1\|VDZ86575.1\|4476304_4477066_+\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181605
LR134138.1\|VDZ86581.1\|4482307_4482583_-\|Maltose/maltodextrin-import-ATP-binding-protein-MalK	unknown	unknown	gnl\|CDD\|236947
LR134138.1\|VDZ86568.1\|4468138_4469368_-\|Inner-membrane-transport-protein-YqeG	unknown	unknown	gnl\|CDD\|273283
LR134138.1\|VDZ86579.1\|4480152_4481439_-\|Putative-ABC-transporter-substrate-binding-protein-yesO	unknown	unknown	gnl\|CDD\|224567
LR134138.1\|VDZ86578.1\|4478955_4480083_-\|translocation-protein-TolB	unknown	unknown	gnl\|CDD\|291262
LR134138.1\|VDZ86569.1\|4469485_4469941_-\|Predicted-membrane-protein	unknown	unknown	gnl\|CDD\|226610
LR134138.1\|VDZ86564.1\|4463363_4464194_+\|Putative-aliphatic-sulfonates-transport-permease-protein-ssuC	unknown	unknown	gnl\|CDD\|223673
LR134138.1\|VDZ86565.1\|4464247_4465219_+\|alkanesulfonate-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|223787
LR134138.1\|VDZ86574.1\|4475405_4476242_+\|4-deoxy-L-threo-5-hexosulose-uronate-ketol-isomerase	unknown	unknown	gnl\|CDD\|179169

Protein	Function_ID	Function_description	E-value
LR134138.1\|VDZ86582.1\|4482595_4483498_-\|Inner-membrane-ABC-transporter-permease-protein-ycjP	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.68774e-88
LR134138.1\|VDZ86572.1\|4472672_4473389_+\|Oligogalacturonate-specific-porin-kdgM-precursor	gnl\|CDD\|368776	pfam06178, KdgM, Oligogalacturonate-specific porin protein (KdgM). This family consists of several bacterial proteins which are homologous to the oligogalacturonate-specific porin protein KdgM from Erwinia chrysanthemi. The phytopathogenic Gram-negative bacteria Erwinia chrysanthemi secretes pectinases, which are able to degrade the pectic polymers of plant cell walls, and uses the degradation products as a carbon source for growth. KdgM is a major outer membrane protein, whose synthesis is strongly induced in the presence of pectic derivatives. KdgM behaves like a voltage-dependent porin that is slightly selective for anions and that exhibits fast block in the presence of trigalacturonate. In contrast to most porins, KdgM seems to be monomeric.	2.58216e-59
LR134138.1\|VDZ86563.1\|4462007_4463354_+\|Nitrilotriacetate-monooxygenase-component-A	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
LR134138.1\|VDZ86567.1\|4466183_4467848_+\|Malate:quinone-oxidoreductase	gnl\|CDD\|179979	PRK05257, PRK05257, malate:quinone oxidoreductase; Validated.	0
LR134138.1\|VDZ86577.1\|4477454_4478873_+\|Arabinose-transporter	gnl\|CDD\|273317	TIGR00879, Membrane_transporter, MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	3.22115e-147
LR134138.1\|VDZ86570.1\|4470035_4470905_+\|HTH-type-transcriptional-activator-AllS	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.0829e-42
LR134138.1\|VDZ86573.1\|4473760_4474936_-\|translocation-protein-TolB	gnl\|CDD\|291262	pfam14583, Pectate_lyase22, Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers.	0
LR134138.1\|VDZ86571.1\|4471016_4472201_+\|Acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
LR134138.1\|VDZ86580.1\|4481453_4482341_-\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	4.23465e-116
LR134138.1\|VDZ86566.1\|4465218_4465989_+\|Aliphatic-sulfonates-import-ATP-binding-protein-SsuB	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.7606e-114
LR134138.1\|VDZ86575.1\|4476304_4477066_+\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase	gnl\|CDD\|181605	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD.	0
LR134138.1\|VDZ86581.1\|4482307_4482583_-\|Maltose/maltodextrin-import-ATP-binding-protein-MalK	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	1.11359e-37
LR134138.1\|VDZ86568.1\|4468138_4469368_-\|Inner-membrane-transport-protein-YqeG	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	2.32892e-152
LR134138.1\|VDZ86579.1\|4480152_4481439_-\|Putative-ABC-transporter-substrate-binding-protein-yesO	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	7.85652e-58
LR134138.1\|VDZ86578.1\|4478955_4480083_-\|translocation-protein-TolB	gnl\|CDD\|291262	pfam14583, Pectate_lyase22, Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers.	0
LR134138.1\|VDZ86569.1\|4469485_4469941_-\|Predicted-membrane-protein	gnl\|CDD\|226610	COG4125, COG4125, Predicted membrane protein [Function unknown].	1.19302e-63
LR134138.1\|VDZ86564.1\|4463363_4464194_+\|Putative-aliphatic-sulfonates-transport-permease-protein-ssuC	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	2.01786e-71
LR134138.1\|VDZ86565.1\|4464247_4465219_+\|alkanesulfonate-transporter-substrate-binding-subunit	gnl\|CDD\|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	1.78232e-41
LR134138.1\|VDZ86574.1\|4475405_4476242_+\|4-deoxy-L-threo-5-hexosulose-uronate-ketol-isomerase	gnl\|CDD\|179169	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional.	0

>LR134138.1|VDZ86572.1|4472672_4473389_+|Oligogalacturonate-specific-porin-kdgM-precursor
MFKKVLALAVLSSMSFAASAVTVDLRHEYIDSGSNADRVAVSHRFDNGLGFGVEAKWKTGGDTDKQDRPFNEIVGNGHEESINWRWKATDNIALTPGFNIESKDSFSIYKPYLHAQYSFDNGFYVAARYRYEYTRVPATSSNGGGVDDKVNKVDTWVGWAMGDWRAELNYVYARSTVADDQHKSLYRNNNKAYSNEYNAKLAYKWDKNWSPYFEVGNVGVKSTDERQTRLRVGVAYSF
>LR134138.1|VDZ86571.1|4471016_4472201_+|Acetyl-CoA-acetyltransferase
MKDVVIVGAVRTPIGCFQGALARHSAVELGSLVINALVTRSGISAAVIDEVIIGQVLTAGTGQNPARQSAIKGGLPNTVSAITINDVCGSGLKALHLATQAIQCGEADVVIAGGQENMSRAPHVLTDSRTGAQLGNSQLIDSLVHDGLWDAFNDYHMGVTAENLAREYGISREQQDAWALSSQQKARKAIDSGRFCEEIVPVNNSLPGGGSQVVDTDEQPQTDPSAEGLAQLIPSFESAGSVTAGNASSINDGAAAVLMMSESKALELGLPILARIRAFASVGVDPALMGIAPVYATRRCLERAGWQLSDVDLIEANEAFAAQAISVGRMLEWNEQKVNVNGGAIALGHPIGASGCRILVSLVHEMVKRDARKGLATLCIGGGQGVALAVERDI
>LR134138.1|VDZ86570.1|4470035_4470905_+|HTH-type-transcriptional-activator-AllS
MRYSPEALTAFVETVACGSFSAAARRLRKSQSTISTAIAHLEADIGVTLFDRRARQPVLTAEGQRVLSYVQAILAASERLDELAVSLSGETEARLAFVLSDTLHPDVLEDLLAQFDSRFPHTEFECLVGEDDDVIDLLQKGRAQVGLIEARDDYPTDIGHTRLPMQTRMAIYVSPTHPLVEQRGVEWELLQTWRELRLNTYLEKQNTPARGPVWSAPNYLMLLSMAAQGLGWCALPCALVEEFSRSAELTMLDIAGWPMSVSIDLLWHKEAPLGAAGSWLRQYLQQVPA
>LR134138.1|VDZ86569.1|4469485_4469941_-|Predicted-membrane-protein
MQHDSLHRRKLPERIFHAVCFEGIATAILAPTAAWLMQRSVVEMGGLTIILATTAMIWNIIYNAGFDRLWPVTRVKRTAKVRALHALGFECGFIVIGVGIVSFVLGVTLLQAFTLEIGFFLFFLPYTMLYNWVYDTLRERVIKRRLARHCA
>LR134138.1|VDZ86568.1|4468138_4469368_-|Inner-membrane-transport-protein-YqeG
MSKIWSKEETLWSFALYGTAVGAGTLFLPIQLGAAGAVVLFITALVAWPLTYWPHRALCQFILSANTPASVGITGAVSHYYGKKIGNLITALYFVAFFVVVLIYAVAITNSLAEQISHYRPVDLPLRALLSLGVVLLLNLIFLTGRQTTIKVMGMLVFPLIAYFLFLSIYLIGSWQPSLLTTQMEVNTHTMHQVWLSIPVMVFAFSHTPIISTFAIDRREKYGEQAMGKCKKIMKVAYLIICLSVLFFVFSCLMSIPPSYINAAKNEGVTILSALSMVPNSPSWLSISGIIVAVVAMSKSFLGTYFGVIEGASEMVKSSLNQVGVRKSRSFNRGLSIMLVSTLTFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPYRSIGSLITLIVGLMCVSVMFLG
>LR134138.1|VDZ86567.1|4466183_4467848_+|Malate:quinone-oxidoreductase
MPAINKKLFSLATIALLVNSAAYANTDTTQKTDVLLIGGGIMSASLGTWLQELQPDWKQVMVEKLDKVALESSNGWNNAGTGHSANMELNYTPERPDGTIDVTKALEINEQFMISRQFWSSQVKRGILNNPHSFINSTPHMSFVWGDKNVDYLGKRYDALQKTTLFQGMKFSTDHQQIAQWAPLVMDGRDPQQKVAATWTPAGTDVNYGEITRQLVSSLQKNDHFSLQTSSEVTEFKRNGDNSWHVTIEDVNNGKQHAIDAKYVFIGAGGGALKLLQKTGIPEADNYAGFPVGGSFLMTENPDVTRLHQQKVYGQASVGAPPMSVPHIDARFIDGKRVVLFGPFATFSTKFLKQGSFLDLLSTTTTSNVMPMTHVGLDNFDLVKYLISQVMLSDDDRFAALKEYYPGARKEDWKLIQAGQRVQIIKKDADKGGVLKLGTEVVVDQQRTISALLGASPGASTAAPITLNVIKKLFPEQFNSPEWQNKIRGIVPSFGQNLNGNTALTQQVWDDTAATLQLTKPPVIQMPQTQVKVMEAKPAQEQPASASPQHDMAL
>LR134138.1|VDZ86566.1|4465218_4465989_+|Aliphatic-sulfonates-import-ATP-binding-protein-SsuB
MTTTAQAQRGDISIRRLRKTFSLEGKPFDVFRDLNLQIDSGQSSAIVGPSGCGKTTLLRILAGLETPDGGDVVIDGQEIHGMSRERAVIFQEPRLLPWLTVLENVSFSLDVQGVPRKKARERAKEAIELVGLSHCEQALPKQLSGGMAQRVGIARALTIQPEILLLDEPLGALDAMTKITMQEELARIHEVEKITMVLVTHDLEEAIYLADRVVILPKMKGDPIRTIEVALPRPRVRSSLDFVALRQQLMAEFGLH
>LR134138.1|VDZ86565.1|4464247_4465219_+|alkanesulfonate-transporter-substrate-binding-subunit
MKKQIKFVWAAALILFGTSASVRAQDEVTMRYMASYGGISAHELADALGYFKGTGVSIKNAGYASGGPESLFALASNSIDIGSAATPAVINSIANGNDFVAAYPTNGINETTKSIFYVKEDSPIKSVKDLVGKTVAVNTLGAHLDYTLREALHQVNLPENAAKPVAVPGPQLEQTLRSGQVDVAAFGYWQTTFEGAARSHGGLRPIFNDADVLGPIAGGFTVLRADFVKKHPDAARIFVVESARALDYARDNPEKVREIMAKILKERGENPEVAQYFTGYGVRKGGLAEPHDVQFWLDILERDGVIQKGQLKASTILLKTEGA
>LR134138.1|VDZ86564.1|4463363_4464194_+|Putative-aliphatic-sulfonates-transport-permease-protein-ssuC
MFYSTTRIRLKARRPATPAYKVWYQRSVSLIARYGLLVLFFAGWQIASSAGWMNAAVIPPLDKIFTALWNGITQGALLGDITISLQRAGLAFFAAIVVGIPLGLFMGQIRPLEQALDPILQLFRQTSALALYPIFILLLGLGETSKVFVIFWAALFPILLSTISGVKEVDSKLLEMAKTFGAGRLTLFYRVIVPASVPSIFVGLRLSATTALLLLIAAEMIGANQGIGFRVINAQYNFQIPMMFAAIFLLAFAGLLANAILVFLQRRLCRWNTRDH
>LR134138.1|VDZ86563.1|4462007_4463354_+|Nitrilotriacetate-monooxygenase-component-A
MSRQIKLGAFLPGGGQHIAAWRHPDQPADGATSFEFHKQLAQTAERGLFDAYFLADGLAIPASGVTDGGTAKVAGFEPVTLFSALAPLTQNIGFIATASTTYEEPYNLARKFASLDLISGGRAGWNVVTTATEAAAHNFNLDTQHPHEYRYQRAKEHVEVVKKLWDSFEDDAFLRDKASGQFFDRDKVHDTNHVGKFFKVRGPLNVPRSPQGQPVIVQAGQSESGRALAAATAEVIFTSHQHLETAQDFYRDIKNRARAVGRNPDHVLIMPGVAPFIGRTEEEAKEKYHKLTSLIVEADGIALLNGLAGGGIDLGKFDPDGPLPPLPVTEGMKSRPELIRQIADENNFTIRELYQWVATARGHFTVVGSAEQVADTLQEWFENEAADGFNVLPPWLPGGLDDFIELVVPILQKRGLFRTQYEGKTLRENLGLPFASNRYSAVRNAKVA
>LR134138.1|VDZ86573.1|4473760_4474936_-|translocation-protein-TolB
MAKGMRVKLNYEVSRDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDVANAEAIQLTEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVNLKTLAEREVYRVPDDWVGYGTWVSNSDCTKLVGIEIAKSDWTPLNDWQLFHDFFHKGPHCRLLRVDLKTGESAVIHEEKNWLGHPIYRPFDDSTVAFCHEGPHDLVDARMWMVNEDGSNVRKVKEHAEGESCTHEFWVPNGSALVYVSYLKGKQGRTIYRFNPDTNVNEALMQMPACSHLMSNFDGTLLVGDGSGTPVDVKDTSGYTIDNDPYLYAFDVAKQAYFRVARHDTSWATVQNSRQVTHPHPSFTPDDSAVLFSSDKDGKPALYIAKLPAERVLMKA
>LR134138.1|VDZ86574.1|4475405_4476242_+|4-deoxy-L-threo-5-hexosulose-uronate-ketol-isomerase
MEVRQSIHSAHAKTLDTQGLRDEFLVEQVFVADEYTMVYSHIDRIIVGGIMPVAKTVSVGGEVGKQLGVSFFLERRELGVINIGGAGTITVDGKFYEIGHRDALYVGKGAKEVVFASVDAAKPAKFYYNCAPAHTTYPTKKVTPADVAPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDEDSCVFHMMGQPQETRHVVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR
>LR134138.1|VDZ86575.1|4476304_4477066_+|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase
MILDSFSLQGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIERVTALGRRFLSLTADLRQIDGIPALLERAVAEYGHIDILVNNAGLIRREDAINFSEKDWDDVMNLNIKSVFFMAQAAAKHFIAQGKGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAQHGINVNAIAPGYMATNNTQQLRADEERSAAILERIPAGRWGLPSDLMGPIVFLASPASDYINGYTVAVDGGWLAR
>LR134138.1|VDZ86576.1|4477062_4477218_-|Uncharacterised-protein
MDDLHTIPAALRLAGLQMYTDVARPSAAPPGKPQAQKNLPKQVFFSSSAKT
>LR134138.1|VDZ86577.1|4477454_4478873_+|Arabinose-transporter
MTSISNDPSLMPRTQRDTKRMNQFVSIAAAVAGLLFGLDIGVIAGALPFITDHFVLSSRMQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMVGAILFVAGSIGSAFAANVEMLLIARVILGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVIFLPNSPRWLAEKGRHVEAEEVLRMLRDTSEKARDELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLLVGLTFMFATFIAVFTVDKAGRKPALKIGFTIMALGTLVLGYCLMQLDNGTVSSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTVLNVAFIGVTFWLIPETKGVTLEHIERKLMKGEKLRDIGV
>LR134138.1|VDZ86578.1|4478955_4480083_-|translocation-protein-TolB
MKGKIIPLNFRQQTDSETGHEVIRMTPPHIICHRNYFYQKCFTRDGGKLIFGGAFEGHWNYYLLDIAAQQATQLTDGPGDNTFGGFLSDDDQSLWYVKDTRQLKRVDLTTLEEYVVYEVDDEWVAYGTWVANSDCTKLVGIEIKKRDWQPLTDWSKFRAFYFTEPECRLINIDLKTGEQRTILQEKRWLGHPIYRPYDDTTVAFCHEGPRDAIDARMWLINQDGSNLRCVRQQQPGESFTHEFWVPDGSALYYVAHQENNPHRYLYSADPVTLENRQLMEIPPCSHLMSNHDGSLVVGDGAPHNTGDISLNDPFIWVFDLQTGDKKAICQHNSSWKVLDGDRQVTHPHPSFSPDGEWVLYTSDVEGMPALYLAKV
>LR134138.1|VDZ86579.1|4480152_4481439_-|Putative-ABC-transporter-substrate-binding-protein-yesO
MKKVLLSAAISATLGLTALPSMAKDVDLRMSWWGGNGRHQVTLKALEEFHKQNPDINVKAEYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKNGDGFYDLNKMKDVIDLSQFDAKELQSTTVNGKLNGIPISVTARVFYLNNETWKQAGVEYPKTWDELMAAGKTFESKLGKQYYPVVLEHQDTLALLNSYMTQKYNIPAINEQTKKLSYSKEQWVEFFQMYKKLVDSHVMPDTKYYASFGKSNMYEMKPWIQGEWGGTYMWNSTINKYSDNLKPPAKLELGNYPMLPGATDAGLFFKPAQMLSIGKSTKNPEAAAKVINFLLNSKEGVDTLGLERGVPLSKVAVKYLTEDGTLKESDPSVAGLRLAQSLPAKLSVSPYFDDPQIVAQFGTSLQYIDYGQKTVEEAASDFQRQAERILKRAMR
>LR134138.1|VDZ86580.1|4481453_4482341_-|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC
MFQNYALYPHMTVRENLAFGLKLSKMPKAQIEAQVNEAAKILELDELLDRLPRQLSGGQAQRVAVGRAIVKKPDVFLFDEPLSNLDAKLRASMRIRISDLHKQLKKSGKPATTVYVTHDQTEAMTMGDRICVMKLGHIMQVDTPDNLYHKPKNMFVAGFIGAPEMNIRSCKLVDKEGRLNLSIGDEFMPLCDSLHQKLTGHENEEVFYGIRPEFVSVSDNPFEHGGCSGEMVRVENMGHEFFVYLKVANYELTARIPSDEAKPMIDKGLHRKVYFKFDMDKCHIFDAKTEQNLSI
>LR134138.1|VDZ86581.1|4482307_4482583_-|Maltose/maltodextrin-import-ATP-binding-protein-MalK
MAEVIFNKLEKVYSNGFKAVHGIDLKIAEGEFMVIVGPSGCAKSTTLRMLAGLETISGGEVRIGEKIVNNLAPKERGDCDGCSRTMRCIRT
>LR134138.1|VDZ86582.1|4482595_4483498_-|Inner-membrane-ABC-transporter-permease-protein-ycjP
MADIQQISEARSIAEREVARTLRREKINAWIRYVILLFVGLLMLYPLAWMFSASFKPNHEIFTTLGLWPTHATWDGFINGWKTGTEYNFGHYMLNTFKYVIPKVILTIISSTIVAYGFARFEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNSYMPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG

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Crispr_ID: LR134138_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134138_3

4524134-4524220

Orphan

Consensus_repeat	Method
CCCCTCACCCTAACCCTCTCCCCAGAGGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134138_3

>merge|LR134138|3|4524134-4524220|CRISPRCasFinder
CCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGAACCGTGCGGAGCCGGAATACCCCTCACCCTAACCCTCTCCCCAAAGGGGC

>LR134138|3|3|4524134-4524220|CRISPRCasFinder
CCCCTCACCCTAACCCTCTCCCCAGAGGGGC	GAGGGAACCGTGCGGAGCCGGAATA
CCCCTCACCCTAACCCTCTCCCCAAAGGGGC

Protein	Signature genes	Signature genes Name	Protein_function
LR134138.1\|VDZ86616.1\|4522279_4524118_+\|Exodeoxyribonuclease-V-alpha-chain	unknown	unknown	gnl\|CDD\|236783
LR134138.1\|VDZ86626.1\|4534763_4535537_+\|Cobalt-precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl\|CDD\|185370
LR134138.1\|VDZ86624.1\|4533606_4534212_+\|Probable-cobalt-precorrin-6Y-C(5)-methyltransferase	unknown	unknown	gnl\|CDD\|235609
LR134138.1\|VDZ86625.1\|4534201_4534780_+\|Probable-cobalt-precorrin-6Y-C(15)-methyltransferase-[decarboxylating]	unknown	unknown	gnl\|CDD\|181354
LR134138.1\|VDZ86613.1\|4517885_4518740_+\|Protease-3-precursor	unknown	unknown	gnl\|CDD\|185056
LR134138.1\|VDZ86614.1\|4518736_4519645_+\|Exodeoxyribonuclease-V-beta-chain	unknown	unknown	gnl\|CDD\|236784
LR134138.1\|VDZ86615.1\|4519730_4522283_+\|Exodeoxyribonuclease-V-beta-chain	unknown	unknown	gnl\|CDD\|236784
LR134138.1\|VDZ86622.1\|4531841_4532477_+\|Cobalt-precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181353
LR134138.1\|VDZ86610.1\|4511964_4512285_+\|Tfp-pilus-assembly-protein-PilV	unknown	unknown	gnl\|CDD\|182384
LR134138.1\|VDZ86621.1\|4530871_4531831_+\|cobalamin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|234919
LR134138.1\|VDZ86608.1\|4511024_4511579_+\|Type-II-secretory-pathway,-component-PulJ	unknown	unknown	gnl\|CDD\|236714
LR134138.1\|VDZ86607.1\|4510494_4511031_+\|Tfp-pilus-assembly-protein-FimT	unknown	unknown	gnl\|CDD\|236704
LR134138.1\|VDZ86611.1\|4512297_4515669_+\|Exodeoxyribonuclease-V-gamma-chain	unknown	unknown	gnl\|CDD\|236835
LR134138.1\|VDZ86609.1\|4511575_4511980_+\|Protein-of-uncharacterised-function-(DUF2509)	unknown	unknown	gnl\|CDD\|183174
LR134138.1\|VDZ86619.1\|4527158_4528235_+\|Threonine-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|181212
LR134138.1\|VDZ86612.1\|4515855_4517907_+\|Protease-3-precursor	unknown	unknown	gnl\|CDD\|185056
LR134138.1\|VDZ86617.1\|4524340_4525672_-\|Amino-acid-acetyltransferase	unknown	unknown	gnl\|CDD\|235386
LR134138.1\|VDZ86623.1\|4532473_4533613_+\|cobalt-precorrin-6A-synthase	unknown	unknown	gnl\|CDD\|234615
LR134138.1\|VDZ86620.1\|4528219_4529089_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|226917
LR134138.1\|VDZ86618.1\|4525901_4527152_+\|N-acetylmuramoyl-L-alanine-amidase-AmiC-precursor	unknown	unknown	gnl\|CDD\|182376

Protein	Function_ID	Function_description	E-value
LR134138.1\|VDZ86616.1\|4522279_4524118_+\|Exodeoxyribonuclease-V-alpha-chain	gnl\|CDD\|236783	PRK10875, recD, exodeoxyribonuclease V subunit alpha.	0
LR134138.1\|VDZ86626.1\|4534763_4535537_+\|Cobalt-precorrin-4-C(11)-methyltransferase	gnl\|CDD\|185370	PRK15473, cbiF, cobalt-precorrin-4 methyltransferase.	0
LR134138.1\|VDZ86624.1\|4533606_4534212_+\|Probable-cobalt-precorrin-6Y-C(5)-methyltransferase	gnl\|CDD\|235609	PRK05787, PRK05787, cobalt-precorrin-7 (C(5))-methyltransferase.	9.70155e-84
LR134138.1\|VDZ86625.1\|4534201_4534780_+\|Probable-cobalt-precorrin-6Y-C(15)-methyltransferase-[decarboxylating]	gnl\|CDD\|181354	PRK08287, PRK08287, decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase.	1.57507e-118
LR134138.1\|VDZ86613.1\|4517885_4518740_+\|Protease-3-precursor	gnl\|CDD\|185056	PRK15101, PRK15101, protease3; Provisional.	7.77856e-169
LR134138.1\|VDZ86614.1\|4518736_4519645_+\|Exodeoxyribonuclease-V-beta-chain	gnl\|CDD\|236784	PRK10876, recB, exonuclease V subunit beta; Provisional.	0
LR134138.1\|VDZ86615.1\|4519730_4522283_+\|Exodeoxyribonuclease-V-beta-chain	gnl\|CDD\|236784	PRK10876, recB, exonuclease V subunit beta; Provisional.	0
LR134138.1\|VDZ86622.1\|4531841_4532477_+\|Cobalt-precorrin-8X-methylmutase	gnl\|CDD\|181353	PRK08286, cbiC, cobalt-precorrin-8 methylmutase.	3.06822e-148
LR134138.1\|VDZ86610.1\|4511964_4512285_+\|Tfp-pilus-assembly-protein-PilV	gnl\|CDD\|182384	PRK10332, PRK10332, prepilin-type N-terminal cleavage/methylation domain-containing protein.	2.46557e-42
LR134138.1\|VDZ86621.1\|4530871_4531831_+\|cobalamin-biosynthesis-protein	gnl\|CDD\|234919	PRK01209, cobD, cobalamin biosynthesis protein.	1.02001e-151
LR134138.1\|VDZ86608.1\|4511024_4511579_+\|Type-II-secretory-pathway,-component-PulJ	gnl\|CDD\|236714	PRK10557, PRK10557, prepilin peptidase-dependent protein.	5.43855e-83
LR134138.1\|VDZ86607.1\|4510494_4511031_+\|Tfp-pilus-assembly-protein-FimT	gnl\|CDD\|236704	PRK10506, PRK10506, prepilin peptidase-dependent protein.	5.86743e-73
LR134138.1\|VDZ86611.1\|4512297_4515669_+\|Exodeoxyribonuclease-V-gamma-chain	gnl\|CDD\|236835	PRK11069, recC, exodeoxyribonuclease V subunit gamma.	0
LR134138.1\|VDZ86609.1\|4511575_4511980_+\|Protein-of-uncharacterised-function-(DUF2509)	gnl\|CDD\|183174	PRK11521, PRK11521, DUF2509 family protein.	2.97432e-45
LR134138.1\|VDZ86619.1\|4527158_4528235_+\|Threonine-phosphate-decarboxylase	gnl\|CDD\|181212	PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional.	0
LR134138.1\|VDZ86612.1\|4515855_4517907_+\|Protease-3-precursor	gnl\|CDD\|185056	PRK15101, PRK15101, protease3; Provisional.	0
LR134138.1\|VDZ86617.1\|4524340_4525672_-\|Amino-acid-acetyltransferase	gnl\|CDD\|235386	PRK05279, PRK05279, N-acetylglutamate synthase; Validated.	0
LR134138.1\|VDZ86623.1\|4532473_4533613_+\|cobalt-precorrin-6A-synthase	gnl\|CDD\|234615	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.	0
LR134138.1\|VDZ86620.1\|4528219_4529089_-\|shikimate-kinase	gnl\|CDD\|226917	COG4542, PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism].	7.93726e-107
LR134138.1\|VDZ86618.1\|4525901_4527152_+\|N-acetylmuramoyl-L-alanine-amidase-AmiC-precursor	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	3.94005e-86

>LR134138.1|VDZ86616.1|4522279_4524118_+|Exodeoxyribonuclease-V-alpha-chain
MTLEQRLLEAVELKLLRPLDVQFALMVAQDEHPAVMLAAVMLSRDTGEGHVCLPLSHLTPAMQPKGRARELWQQLFADAGEPEDWSALLLASQAVSVGERPSPLILSRERLYLNRMWRNELTVARFFSDTQAPFAVDEPQLAATLNALFPLSDTVDWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALVQMSGTQKCRIRLAAPTGKAAARLTESLGAALRKLNLSDEQKAMLPSDASTLHRLLGAQPGSQKMRYHADNPLHLDVLVVDEASMIDLPMMARLIDALPPHGRVIFLGDRDQLASVEAGAVLGDICSWVNHGYTAERALELSRLVGADVPAGEGHAASALRDSLCLLRTSYRFGSDSGIGQLAGAVNRGDKKTVSEVFTRGFSDIELKALRTTDDYAAMLDDARAGYGHYLQSLRDRADPALVLAAFGEYQILCALREGPWGVSGLNTQFELLLTRHRQIVPQRHSRWYEGRPVMITRNDSALGLFNGDIGIALDRGQGTRVWFPMPDGTIKSVQPSRLPEHDTAWAMTVHKSQGSEFTNAALVLPTQIVPVVSRELVYTAITRAKARLSMYADENLLVQAIATRTERRSGLAAIFAEMT
>LR134138.1|VDZ86615.1|4519730_4522283_+|Exodeoxyribonuclease-V-beta-chain
MTEIREAVAQEKRRRGELGFDDMLSRLDEALHGDSGDALAAAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIYAFRGADIFTYMRARGDVAAHYTLDTNWRSAPGMVESVNRLFGLVDNPFMFRDIPFLPVKSASKNASLRFEVDGENQPAMNLWLMPGEGISAGDYQNFMAGQCAAQIRDWLTGGQRGTALLWRGDKAQPVQASDITVLVRNRQEASLIRDALNALAIPSVYLSNRDSVFETPEAQELLWVLQAVLTPERENALRSALATAMFGLNARDIEQLNQDENAWDALVEEFTEYRNTWLRRGVMPMLRALMSARSIAENLLATHGGERRLTDILHLSELLQEAATQLESEHALVRWLNQQVAEPDTNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQNQAFYHDRNSFAAVLDLNESDESLELAEAERLAEDLRLLYVALTRAVWHCSLGIAPLTARRSDKPTDTELHHSAPGRLLQKGEVLDAAGLEACLRALCDEHIALTLATPPDDTRWQPTQAAMPELAARQVLRRVLDDWRVTSYSGLQQRGHSVAQDLLPRLDIDAVGTGETLPELELTPHNFPRGASPGTFLHSLFEDLDFTQPISPEWMQEQLQNNGFGEHWEPVLTAWISQVLEAPLADTGIALNQLSAREKQVEMEFYLPIETTLDARALDALTRRYDPLSAGCPELDFRQVRGMLKGFIDLVFRHDGRYYLLDYKSNHLGDSGEAYTQQAMAQAMQSHRYDLQYQLYSLALHRYLRHRLADYDYERHFGGVIYLFLRGVDGDAGQQGIFTTRPDRELITAMDALFAGVEQEMDA
>LR134138.1|VDZ86614.1|4518736_4519645_+|Exodeoxyribonuclease-V-beta-chain
MTETAESLDPLRLPLFGERLIEASAGTGKTFTIAALYLRLLLGLGGEAAYPRPVNVEELLVVTFTEAATEELRGRIRSNIHELRVACLRNATDNPLYASLLAEIDDLQQAASVLLLAERQMDDAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESQLRYQACADFWRRHCYPLDREIAQVIVESWKGPQDLLKSIDRYLQGEAPQLKMPISNTETLESRHQQILTQISEIKQRWLTHVAELDALLENSAIDRRKFNRGNQGKWIDKITAWAQEESKKLSASRCAGKVQPVVPCLAHQSGR
>LR134138.1|VDZ86613.1|4517885_4518740_+|Protease-3-precursor
MLPAITLKEVMDYRDQLKAGGRPEFMVIGNLSVEQSTKLARNVQSQLGSHGNEWCRNKDVVVDKQQNVIFEKAGGSTDSALAAVFVPPNVDEFSSSAASAILAQIVQPWFYSQLRTEEQLGYAVFAFSMNVGRQWGMGFLLQSNEKQPAFLWERFKAFFPTAEQKLRAMKPEEFAQIQQAVIADMLQAPQTLGDEASQLSKDFDRGNMAFDSRAKVVAQIKLLTPQKLADFFHQTVVAPQGMTVLSQVSGSQNGKVDYAHPEGWKVWQSITALQQTLPLRRENE
>LR134138.1|VDZ86612.1|4515855_4517907_+|Protease-3-precursor
MPRSFLLSIVVFVTAFWATVGQADTGWQPIQETIRKSEKDPRQYQAITLDNNMVVLLVSDPQAVKSLSALVVPVGSLQDPDSHPGLAHYLEHMTLMGSKHYPQPDNLAEFLKMHGGSHNASTAPYRTAFYLEVENDALQGAVDRLADAIAAPLLDKKYVDRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGARFSGGNFETLSDKPNSPVYDALRAFRDKYYSANLMKAVIYSNKPLPELAKIAAETYGRVPNKSIERPEISVPVVTDAQKGIVIHYVPALPRKVLRVEFRIDNNSAQFRSKTDELITYMIGNRTPGTLSDWLQKQGLVEGIRADSDPVVNGNSGVLAISATLTDKGLAHRDDVVAAIFSYLDLMRQKGIDKKDFDELAHVLDLDFRYPSINRNMDYVEWLADTMIRVPVQHTLDAVNIADQYDAQAVKDRLAMMTPQNARIWYISPQEPHNKMAYFVDAPYQVDKISADTFAKWQKAASGINLSLPQLNPYIPDDFTLIKSDKSYTHPKLVIDEPNLRLVYMPSRYFSREPKADITMILRNPQAMDSAKSQVMFALNDYLAGIALDQLSNQAAVGGIGFSTGANNGLMLNANGYTQRLPQLFDALLQGYFSYTPTEEQLEQAKSWYKQMMDSAEKGKAYEQAIMRCRCCLRSRTSSVKSVKPCCQPLP
>LR134138.1|VDZ86611.1|4512297_4515669_+|Exodeoxyribonuclease-V-gamma-chain
MLRVYHSNRLDVLEALMEFIVEQDRLADPFEPEMILVQSTGMAQWLQMTLSTRFGIAANIDFPLPASFIWDMFTRVLPEIPGESAFNKQSMSWKLMTLLPGMLDNEAFTPLRHYLTDDADKRKLFQLASRVADLYDQYLVYRPQWLTQWEAGELVDGVGDAQQWQAPLWKALVEHTAALGQPLWHRANLYQRFIDTLEKSSEPPAGLPSRVFICGISALPPVYLQALQALGKHVDIYVLFTNPCRYYWGDIKDPAFLARLLARQRRHYREQRELPLFQDTTSAPGLFNDDGEQDVGNPMLASWGKLGRDYIYLLAGLERYQELDAFVDIEPDNLLHNVQYDVLELKNGAVAGRTAEEFASSVDKRPLASDDRSLTVHVCHSPQREVEILHDQLLAMLEADPTLTPRDIIVMVADIDSYSPFIQAVFGSATGERYLPYAISDRRARQAHPAMQAFITLLSLPDSRFTSEDVLALLDVPVLAARFNVDEAGLLHLRQWVNESGVRWGMDDDNVRELDLPATGQHTWRFGLTRMLLGYAMESREGEWQDVLPYDESSGLIAELVGHLASLLMQLNRWRQVLTQSRTLDEWLPVCRDMLNDFFLPDQDTEAALTLIEQQWQAIIAQGVQSQYEGEVPLSLLRDELAQRLDQERISQRFLAGPINICTLMPMRSIPFKVVCLLGMNDGIYPRALAPLGFDLMSQKPLRGDRSRRDDDRYLFLEAMMSAEKALYISYIGRSIQDNSERYPSVLVQELLDYIGQSHCLEGDEGLNCDESERRVKNHIMHQHTRMPFDAENYQANEQQSYAREWLAAASQQGEAHADFIQPLAPLEFTTLTLEQLQRFWRHPVRAFFQMRLQVNFRSEESDIPDTEPFTLEGLTRYQLNQQLLNTLIEQQEPEPMYRRYRAAGELPYGPFGEIAWEAQRLEMAALADRVIECRRAGQNMEIDLDCAGVNITGWLPQVQDNGLLRWRPSLLSVSQGMQLWLEHLVYCASGGNGESRLLLRKEGEWCFPALCVDEAKAYLEQLVEGYRQGMCQPLLFLPESGGAWIKACYDAQNDAILRDDDSLQKARSKFLQAYEGNMVVRGEGADVWYQRLWRTLEPAQYEAIIEQTTPYLLPVFRFNQSI
>LR134138.1|VDZ86610.1|4511964_4512285_+|Tfp-pilus-assembly-protein-PilV
MSGKLTPRGFSLPEVILAMFLMISVVTALGGYYRVLATSSLQLNQYRQMWRYGWGQTQLQANALPESWLSQRLKTSSQSCVSINATITTPLGKQGRMMRLHCPVSQ
>LR134138.1|VDZ86609.1|4511575_4511980_+|Protein-of-uncharacterised-function-(DUF2509)
MNRQRGVSSLAMVLMLLLLGSLMLQGLNQAQRQQLAMVNDEARALRKMASVHSALQWGKVQTWTVAVGQQCLPYDNTSRVCLRLFTNGTLLLIAQNEALRLWQLGKWTAGGVHFSPHGWSDFCPLAEATLCQAN
>LR134138.1|VDZ86608.1|4511024_4511579_+|Type-II-secretory-pathway,-component-PulJ
MLMRGFSLLETLIAMAISSILLLGASRFLPSLQFGIMQQMRQQTLEDDLWQQLFTVAKHLQRAGYCAGDSCHGEPLYLTPKGDCLIVRWDGNSNGQWETSPADEADSIGFRLKSGALETHRGATTCEGKGWDKMSEPAAMTVTGFQVLQTAHSGFPPEFTIVLSASTGRGETANAQYGVTGYNL
>LR134138.1|VDZ86607.1|4510494_4511031_+|Tfp-pilus-assembly-protein-FimT
MIFSVASRKTKITPSRYDFPPGILANMNRQRGYTLIETLIVISLVLILSASGLYGWQSWQQSQRLWQTASAVRDYLLYLRNDANWHNIDRRLRVNRTAQYWCLVADDTVLTDCPSGNPAVFRPLWAQVSLSKMTPNLTFFGVRNTAWAGSIVLSNAADSWSIVISSWGRVRLCEAATC
>LR134138.1|VDZ86617.1|4524340_4525672_-|Amino-acid-acetyltransferase
MVKERRTELVEGFRHSVPYINAHRGKTFVIMLGGEAIEHENFSSIVSDIGLLHSLGIRLVLVYGARPQIDANLAEHNHEPTYHKHIRVTDSKTLELVKQAAGLLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGIDYCHSGRIRRIDEEAIHRQLDNDAIVLMGPVAVSVTGESFNLTSEEVATQLAIKLKAEKMIGFCSSQGVYNEAGDIVPELFPNEAQARIEELEQEGDYLSGTARFLRGAVKACRSGVRRSHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRRATINDIGGILDLIAPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIATQAKQMGLNHLFVLTTRSIHWFQERGFKPVDVELLPESKKLLYNYQRRSKVLMTDLV
>LR134138.1|VDZ86618.1|4525901_4527152_+|N-acetylmuramoyl-L-alanine-amidase-AmiC-precursor
MSGSQSLSRRRLLKGAGAMWLLSVSQVGFAAVSQVVAVRIWPASSYTRVTVESNRVIKYRQFALSNPDRMVVDLEGVNLNSVLKGMGAQIRADDPYIKSARVGQFDPQTVRMVFELKQDVKPQLFALAPVAGFKERLVMDLYPVNSNDVQDPLLALLEEYNKDGLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGLHKTREKDVVLQIARRLRALIEKEGNMKAYMTRNEDIFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNAADLVGGVSKSGDRYVDHTMFDMVQSLTITDSLKFGKAVLKRLGKVNNLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTAAFQQEVAESILAGIKAYFADGATLARRG
>LR134138.1|VDZ86619.1|4527158_4528235_+|Threonine-phosphate-decarboxylase
MSQLKSVHGGNTREAAALLGISPDQLLDFSANINPLGMPESIKQAIISQLSCAERYPDVDYAQLHEALAAHHEVPASWILAGNGETESIFTFAHGLKPRRAMVIAPGFAEYRRALDTLDCQVETFVLCEEDGWQLTDRILRALTAELDCLFLCTPNNPTGLLPERALLEAIADRCRTLDIALVLDEAFIDFIPGEPGFIPLLAQNPHIWVLRSLTKFYAIPGLRLGYLLNSNAQAVARLRQHQMPWSINAFAALAGEIALNDEAYQQATRRWLAQEGQRFYRLLGEIDGLTVYPGQANYLFLRCERPEIELQDALLQQHILIRSCANYPGLDGRYFRVAIRSNAENEQLLTALRQVLS
>LR134138.1|VDZ86620.1|4528219_4529089_-|shikimate-kinase
MSVARCPGSCGEIIQGWILGSEKLISCPIDWYSTVEVCDGTPLPDERPLTRATVNALLAHFGYALSRSQALRVEVHSTIPVAKGMASSTADIAATAIATAHHLGHSLDESILATLCVSLEPTDSTLFRQLTLFDHHHARTQIACGPSPEFDLLVLESPVILRTADYHRLPREAALHANADVLQGAWEKVQTACASNSASLLGEAATLSAIASQALLPKPGFAALLSLVESCGLYGLNVAHSGSVVGLMLDRRHHDVEYLKWALGQKKLTDHWPKQHLLSAVPGGVQLST
>LR134138.1|VDZ86621.1|4530871_4531831_+|cobalamin-biosynthesis-protein
MTLLAWCLAWVLDFVIGDPQNWPHPVRWIGNLISIVQRWVRRICRSDRALRIGGGVMWLVVVGLTYGVTWGVLTLATKIHPWLGWGVEVWMIFTVLAGRCLARSAQDVERPLRDGNLAESRLKLSWIVGRDTSELQPEQINRAVVETVAENTVDGIIAPLFFLLLGGAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARLDDVANFIPARLSWLLISAAAFLCRFDAVRALRIGWRDRRNHSSPNCAWSEAAVAGALGIRLGGPNAYFGERVEKPWIGDDHRAIAIDDISRTIRLMWVSSTLALLLFMAVRVWLMGVA
>LR134138.1|VDZ86622.1|4531841_4532477_+|Cobalt-precorrin-8X-methylmutase
MNYIQQPQAIERKSFEIISDIIAETRPEYRFDSPLHEAIIKRVIHTTADFEWLDILWFAPDALARLTEALSRPCTLYTDTTMALSGINKNLLATFGGECRCYISDPRVVREAKAQGMTRSMAAVDIAVQEAGDKVFVFGNAPTALFRLLEHKGVEVGGVVGVPVGFVGAAESKDALSKSGLPGIAALGRKGGSNVAAAIVNAILYHLQAAQ
>LR134138.1|VDZ86623.1|4532473_4533613_+|cobalt-precorrin-6A-synthase
MNEPAFDAPVWHNGKALRKGYTTGSCATAAAKVAALMVMRQHLIHQVSIVTPSGVTLNLNVESPHVEGQQGIAAIRKDGGDDIDATHGMLIFARVTLNDSGDITLRGGEGVGTVTRKGIGLPIGSSAINRTPRHTIETAVREAIGPARGAEVEIFAPEGEERAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLALELEMKHAAGLERVVLVPGNHGERFVREQMGIDSQVVVTMSNFVGYMIEEAVRLGFRQIVLIGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVSDCDTTEAAMEHIDAFGFQRIYNHLAERICQRVMQRLRFTKMPPECDAIMFSFDNQILGSNRPVSEIIEAMKC
>LR134138.1|VDZ86624.1|4533606_4534212_+|Probable-cobalt-precorrin-6Y-C(5)-methyltransferase
MLTVVGMGPAGVQLMTPQATQAVLSADVLVGAVRHLAQFADFCGECCPLGANIDQILQWITERSAQNVVVLASGDPLFYGIGTRLIAHFGRDNVQVIPGVSAVQYLCARAGIDMNEMWLTSSHGREVNFDALASHLKVAMVTDKRCGPKQIAAELVARGKGYRWMVIGENLAQDNERIHWLPVSAVANDYEMNTVVILDER
>LR134138.1|VDZ86625.1|4534201_4534780_+|Probable-cobalt-precorrin-6Y-C(15)-methyltransferase-[decarboxylating]
MKDELFLRGEKVPMTKEAVRALALSKLELHWASHLIDIGAGTGSVSIEAALQNPTLAVTAIERNPAALRLLEENCQRFACGNISVMAGEAPDVRVEQADAIFIGGSGGHLCALIDWSLQHLRPGGRLVMTFILQENLHAALDHLRHSGVTALDCQQLNIAALTPLGSGHYFKPHNPVFVIACQKEDAHVHTL
>LR134138.1|VDZ86626.1|4534763_4535537_+|Cobalt-precorrin-4-C(11)-methyltransferase
MSTLFDPRCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLINTELLDYCPSDAECHDSAELHLEQILELMEAGVKAGKTVVRLQTGDVSLYGSVREQGEELTRRGIAWQVVPGVSAFLGAAAELGVEYTVPEVSQSLIITRLEGRTPVPEREQLESFAQHQTSMAIYLSVQRIHKVAERLIDGGYPTSTPVAVVYKATWPESQTVRGTLADIGDKVRDAGIRKTALILVGNFLGDEYHYSRLYAADFSHEYRKA

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

58674 : 69525

Enterobacteria_phage(71.43%)

integrase

attL 59140:59162|attR 69537:69559

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ82052.1\|58674_58908_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	3.2e-24	74.0
59140:59162	attL	NA	NA	NA	NA
VDZ82053.1\|59571_61905_-	DNA primase TraC	Q7M2A8	Enterobacteria_phage	0.0e+00	83.4
VDZ82054.1\|61920_62241_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82055.1\|62237_62465_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82056.1\|63016_63277_-	Predicted transcriptional regulator	Q7M299	Enterobacteria_phage	3.4e-27	71.1
VDZ82057.1\|63827_64631_+	Uncharacterised protein	Q7M2A2	Enterobacteria_phage	1.4e-10	25.6
VDZ82058.1\|64627_64870_+	DNA-binding transcriptional regulator	Q7M294	Enterobacteria_phage	8.4e-20	58.0
VDZ82059.1\|64885_65461_+	Phage polarity suppression protein (Psu)	Q7M2A1	Enterobacteria_phage	7.3e-38	50.8
VDZ82060.1\|65954_67571_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VDZ82061.1\|67539_68298_+	chromosome segregation protein	NA	NA	NA	NA
VDZ82062.1\|68331_69525_-\|integrase	Prophage CP4-57 integrase	A0A1B5FPC6	Escherichia_phage	8.5e-105	49.5
69537:69559	attR	NA	NA	NA	NA

DBSCAN-SWA_2

502880 : 511455

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ82485.1\|502880_503828_+	Sulfate/thiosulfate import ATP-binding protein CysA	G3M9Y6	Bacillus_virus	1.2e-21	29.3
VDZ82486.1\|503811_504549_+	Putative osmoprotectant uptake system permease protein yehW	NA	NA	NA	NA
VDZ82487.1\|504523_504637_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82488.1\|504696_505416_-	HTH-type transcriptional repressor YcgE	Q9EYF2	Enterobacteria_phage	1.5e-72	70.4
VDZ82489.1\|505627_507313_+	Probable sensor-like histidine kinase YehU	Q9EYF3	Enterobacteria_phage	3.5e-266	87.2
VDZ82490.1\|507309_508029_+	Probable transcriptional regulatory protein YehT	NA	NA	NA	NA
VDZ82491.1\|508081_508612_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	1.1e-69	84.0
VDZ82492.1\|508678_509194_-	Uncharacterized lipoprotein yehR precursor	Q9EYF5	Enterobacteria_phage	1.4e-08	27.4
VDZ82493.1\|509421_511455_-\|tRNA	Methionine--tRNA ligase	A0A1V0SDF2	Indivirus	3.0e-54	28.3

DBSCAN-SWA_3

584924 : 591214

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ82564.1\|584924_586334_+	putative colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	6.0e-17	33.7
VDZ82565.1\|586458_587352_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.7e-46	42.8
VDZ82566.1\|587826_588831_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.6e-91	53.4
VDZ82567.1\|588830_589730_+	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	6.7e-30	34.6
VDZ82568.1\|589783_590662_+	Glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.1e-106	63.4
VDZ82569.1\|590725_591214_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.1e-42	54.9

DBSCAN-SWA_4

670192 : 675049

Burkholderia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ82647.1\|670192_671347_-	Porin OmpN	Q1MVN1	Enterobacteria_phage	9.3e-109	53.8
VDZ82648.1\|672073_672355_+	Inner membrane protein yedR	NA	NA	NA	NA
VDZ82649.1\|672399_673110_+	putative hydrolase	S4W232	Pandoravirus	4.0e-09	31.8
VDZ82650.1\|673057_674014_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	6.6e-60	62.6
VDZ82651.1\|673988_674324_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	6.2e-13	59.7
VDZ82652.1\|674286_674574_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	2.1e-14	59.2
VDZ82653.1\|674554_675049_+	Very short patch repair protein	E5E3X5	Burkholderia_phage	2.6e-28	45.7

DBSCAN-SWA_5

700165 : 740094

Enterobacteria_phage(36.36%)

protease,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ82685.1\|700165_701458_-	site-specific tyrosine recombinase XerC	Q8W658	Enterobacteria_phage	2.2e-167	65.5
VDZ82686.1\|701513_701750_-	Putative excisionase (DUF1233)	Q8W657	Enterobacteria_phage	1.8e-38	89.7
VDZ82687.1\|701783_702200_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82688.1\|702196_702481_-	Uncharacterised protein	I7B2L9	Escherichia_phage	3.9e-08	51.8
VDZ82689.1\|702483_703032_-	Uncharacterised protein	A0A2H4FRZ0	Salmonella_phage	3.8e-12	40.6
VDZ82690.1\|703028_703352_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82691.1\|703344_703689_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82692.1\|703685_703883_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82693.1\|703870_704410_-	Uncharacterised protein	A0A192Y8M4	Salmonella_phage	9.5e-80	80.4
VDZ82694.1\|704545_705373_-	Uncharacterized conserved protein	A0A192Y6E5	Salmonella_phage	1.6e-118	77.8
VDZ82695.1\|705430_705802_-	Uncharacterised protein	Q8HAA1	Salmonella_phage	2.7e-54	85.4
VDZ82696.1\|706222_706849_-	Uncharacterized HTH-type transcriptional regulator CBU_1416	A8CGC0	Salmonella_phage	6.7e-45	47.8
VDZ82697.1\|706951_707197_+	DNA-binding transcriptional regulator DicC	NA	NA	NA	NA
VDZ82698.1\|707189_707741_+	Uncharacterised protein	A0A0P0ZE62	Stx2-converting_phage	9.4e-43	49.7
VDZ82699.1\|707904_708084_+	Uncharacterised protein	S5M7S5	Escherichia_phage	1.5e-13	71.2
VDZ82700.1\|708073_708934_+	Conserved phage C-terminus (Phg_2220_C)	A0A1C9IHW0	Salmonella_phage	2.1e-52	78.8
VDZ82701.1\|708930_709464_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.7e-81	78.7
VDZ82702.1\|709429_710266_+	Uncharacterised protein	Q8HA94	Salmonella_phage	1.5e-20	31.1
VDZ82703.1\|710308_710872_+	Crossover junction endodeoxyribonuclease rusA	Q8HA93	Salmonella_phage	5.3e-57	88.4
VDZ82704.1\|710883_711360_+	KilA-N domain	A0A0P0ZCS0	Stx2-converting_phage	1.1e-15	39.0
VDZ82705.1\|711356_712124_+	Phage anti-repressor protein	Q8W644	Enterobacteria_phage	2.4e-36	49.7
VDZ82706.1\|712262_713210_+	Protein of uncharacterised function (DUF968)	Q8SBE5	Shigella_phage	5.7e-104	56.2
VDZ82707.1\|713231_713921_+	Phage antitermination protein Q	NA	NA	NA	NA
VDZ82708.1\|714161_714353_+	Uncharacterised protein	Q8SBE3	Shigella_phage	4.9e-23	85.7
VDZ82709.1\|714503_715556_+	Modification methylase DpnIIB	Q8SBE2	Shigella_phage	5.4e-172	81.0
VDZ82710.1\|715695_715911_+	Lysis protein S	A5LH82	Enterobacteria_phage	4.8e-27	82.6
VDZ82711.1\|715910_716441_+	Phage-related lysozyme (muraminidase)	K7PLY1	Enterobacteria_phage	1.5e-74	74.0
VDZ82712.1\|716456_716969_+	Uncharacterised protein	A0A142F122	Klebsiella_phage	2.3e-19	38.9
VDZ82713.1\|717167_717422_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82714.1\|717570_718026_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82715.1\|718401_718578_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82716.1\|718589_719090_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82717.1\|719264_719753_+	Protein of uncharacterised function (DUF1441)	K7PJY2	Enterobacterial_phage	4.0e-77	94.4
VDZ82718.1\|719752_721858_+\|tail	Bacteriophage tail assembly protein	K7PH52	Enterobacterial_phage	0.0e+00	86.9
VDZ82719.1\|721854_722070_+	Uncharacterised protein	A5LH28	Enterobacteria_phage	3.8e-24	80.0
VDZ82720.1\|722066_723572_+\|portal	phage portal protein, lambda family	K7PHM5	Enterobacterial_phage	4.9e-259	87.2
VDZ82721.1\|723516_725517_+\|protease	ATP-dependent Clp protease proteolytic subunit 1	K7PKX4	Enterobacterial_phage	0.0e+00	84.8
VDZ82722.1\|725594_725936_+	Uncharacterized conserved protein	K7PJY3	Enterobacterial_phage	1.0e-31	63.0
VDZ82723.1\|725928_726204_+	Uncharacterised protein	K7PH43	Enterobacteria_phage	2.3e-26	60.4
VDZ82724.1\|726212_726791_+\|tail	Prophage minor tail protein Z (GPZ)	K7PMB7	Enterobacterial_phage	5.5e-86	88.0
VDZ82725.1\|726787_727189_+\|tail	Phage minor tail protein U	K7PHM6	Enterobacterial_phage	1.8e-59	80.5
VDZ82726.1\|727199_727526_+	Uncharacterised protein	M9NYX0	Enterobacteria_phage	5.6e-43	87.2
VDZ82727.1\|727464_727944_+	Bacterial Ig-like domain (group 2)	M9NYX0	Enterobacteria_phage	1.3e-43	61.4
VDZ82728.1\|727998_728409_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	2.0e-13	41.8
VDZ82729.1\|728474_728738_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	2.9e-18	56.5
VDZ82730.1\|728721_731796_+\|tail	Phage-related minor tail protein	E4WL33	Enterobacteria_phage	1.2e-211	44.3
VDZ82731.1\|731816_732164_+	Phage-related protein	K7P7G7	Enterobacteria_phage	2.5e-25	52.2
VDZ82732.1\|732160_732916_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	8.5e-127	83.3
VDZ82733.1\|732917_733628_+	NlpC/P60 family	K7P6F5	Enterobacteria_phage	1.3e-132	89.0
VDZ82734.1\|734047_734650_+\|tail	Phage-related protein, tail component	K7PM97	Enterobacterial_phage	3.6e-72	70.8
VDZ82735.1\|734701_738262_+	Domain of uncharacterised function (DUF1983)	O64335	Escherichia_phage	0.0e+00	79.5
VDZ82736.1\|738310_739459_+	Uncharacterised protein	H6WRW6	Salmonella_phage	1.2e-148	72.8
VDZ82737.1\|739464_739629_+	Uncharacterised protein	K7P6M1	Enterobacteria_phage	1.8e-10	91.4
VDZ82738.1\|739695_740094_+	Uncharacterised protein	K7P834	Enterobacteria_phage	4.2e-69	100.0

DBSCAN-SWA_6

796599 : 882669

108

Enterobacteria_phage(18.64%)

tail,terminase,head,portal,tRNA,capsid,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ82794.1\|796599_798333_-\|tRNA	Arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	3.7e-85	33.6
VDZ82795.1\|798562_799129_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VDZ82796.1\|799170_799944_+	Copper homeostasis protein CutC	NA	NA	NA	NA
VDZ82797.1\|800196_801165_-\|tRNA	tRNA (mo5U34)-methyltransferase	NA	NA	NA	NA
VDZ82798.1\|801161_801905_-\|tRNA	tRNA (cmo5U34)-methyltransferase	F5B419	Synechococcus_phage	1.3e-23	30.4
VDZ82799.1\|801944_802340_-	Inner membrane protein yecN	NA	NA	NA	NA
VDZ82800.1\|802391_803117_-	Protein of uncharacterised function DUF72	Q859D1	Escherichia_coli_phage	2.7e-53	77.2
VDZ82801.1\|803143_804457_-	site-specific tyrosine recombinase XerC	Q8W658	Enterobacteria_phage	1.3e-226	86.9
VDZ82802.1\|804512_804752_-	Putative excisionase (DUF1233)	Q8W657	Enterobacteria_phage	1.0e-38	94.7
VDZ82803.1\|804748_804973_-	Uncharacterised protein	A0A286S2B3	Klebsiella_phage	7.0e-13	47.3
VDZ82804.1\|804969_805086_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82805.1\|805091_805670_-	Uncharacterised protein	A0A088C4R7	Shewanella_sp._phage	1.3e-13	27.9
VDZ82806.1\|805669_806512_-	Uncharacterized phage-encoded protein	A0A2L1IV39	Escherichia_phage	2.8e-30	64.6
VDZ82807.1\|806520_807027_-	Uncharacterised protein	F1C5A2	Cronobacter_phage	3.2e-53	56.5
VDZ82808.1\|807048_807417_-	Uncharacterised protein	A0A1B5FPB3	Escherichia_phage	2.8e-19	49.0
VDZ82809.1\|807409_807601_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82810.1\|807600_807711_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82811.1\|807707_808094_-	Uncharacterised protein	F1C5A0	Cronobacter_phage	1.7e-38	61.6
VDZ82812.1\|808163_808457_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82813.1\|808628_809321_-	Uncharacterized HTH-type transcriptional regulator HI_1476	A0A2H4FNG6	Salmonella_phage	1.9e-85	65.8
VDZ82814.1\|809447_809690_+	Uncharacterized protein conserved in bacteria, prophage-related	A0A2H4FNF3	Salmonella_phage	5.4e-11	47.3
VDZ82815.1\|809720_810548_+	Uncharacterized phage-encoded protein	Q8W644	Enterobacteria_phage	1.5e-92	60.0
VDZ82816.1\|810544_811453_+	Uncharacterised protein	H2DE83	Erwinia_phage	8.3e-36	60.5
VDZ82817.1\|811463_812342_+	DNA replication protein dnaC	Q8W641	Enterobacteria_phage	3.0e-59	48.6
VDZ82818.1\|812338_813694_+	Replicative DNA helicase	Q8W640	Enterobacteria_phage	4.4e-166	67.0
VDZ82819.1\|813704_814013_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82820.1\|814009_814792_+	Antitermination protein	F1C595	Cronobacter_phage	9.4e-105	73.6
VDZ82821.1\|815093_815897_-	Protein of uncharacterised function (DUF3800)	Q19UP3	Mannheimia_phage	8.9e-66	45.9
VDZ82822.1\|816512_816914_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82823.1\|816910_817192_+	Protein of uncharacterised function (DUF754)	NA	NA	NA	NA
VDZ82824.1\|817200_817815_+	Predicted chitinase	Q8HA86	Salmonella_phage	2.2e-93	79.9
VDZ82825.1\|817811_818036_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82826.1\|818032_818311_+	Uncharacterised protein	G8C7W1	Escherichia_phage	7.6e-25	73.6
VDZ82827.1\|818484_818667_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82828.1\|818910_819087_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82829.1\|819098_819695_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82830.1\|819706_819982_+	Uncharacterised protein	K7P6W1	Enterobacteria_phage	1.1e-18	63.0
VDZ82831.1\|820204_820576_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82832.1\|820951_821512_+	Uncharacterised protein	A0A220NRM6	Escherichia_phage	1.8e-97	89.8
VDZ82833.1\|821511_822972_+	mycofactocin system glycosyltransferase	A0A220NRM5	Escherichia_phage	1.9e-228	77.2
VDZ82834.1\|822953_823547_+	Uncharacterised protein	K7PGW6	Enterobacterial_phage	3.5e-83	71.8
VDZ82835.1\|823614_823893_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82836.1\|824046_824544_+\|terminase	Phage terminase, small subunit	K7PHI2	Enterobacteria_phage	2.2e-67	78.2
VDZ82837.1\|824543_826301_+\|terminase	Phage terminase-like protein, large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	88.0
VDZ82838.1\|826310_826496_+	Uncharacterised protein	A0A1B5FP99	Escherichia_phage	3.1e-14	61.0
VDZ82839.1\|826495_827725_+\|portal	phage portal protein, HK97 family	U5P411	Shigella_phage	3.4e-202	82.4
VDZ82840.1\|827711_828365_+\|head,protease	phage prohead protease, HK97 family	U5P4H2	Shigella_phage	9.6e-103	84.6
VDZ82841.1\|828377_829592_+\|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	U5P0G9	Shigella_phage	3.0e-190	83.9
VDZ82842.1\|829633_829945_+\|head,tail	Phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	1.7e-20	48.5
VDZ82843.1\|829954_830293_+\|head,tail	Bacteriophage head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	6.0e-40	72.3
VDZ82844.1\|830289_830739_+	phage protein, HK97 gp10 family	K7PH04	Enterobacteria_phage	1.1e-70	94.6
VDZ82845.1\|830735_831083_+	Protein of uncharacterised function (DUF3168)	K7PM93	Enterobacterial_phage	4.8e-53	90.4
VDZ82846.1\|831142_831586_+\|tail	Phage tail protein	K7PHL2	Enterobacterial_phage	1.0e-71	93.8
VDZ82847.1\|831594_831978_+\|tail	Phage tail assembly chaperone	K7PKV6	Enterobacterial_phage	1.3e-62	92.9
VDZ82848.1\|831986_832265_+	Uncharacterised protein	Q9MCS5	Enterobacteria_phage	2.0e-41	94.6
VDZ82849.1\|832322_832511_+	Uncharacterised protein	K7PH36	Enterobacterial_phage	1.1e-24	96.8
VDZ82850.1\|832540_835807_+\|tail	Phage-related minor tail protein	G8C7J5	Escherichia_phage	0.0e+00	88.7
VDZ82851.1\|835809_836148_+	Phage-related protein	K7PKL8	Enterobacterial_phage	3.6e-37	58.9
VDZ82852.1\|836144_836903_+\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	1.6e-93	62.0
VDZ82853.1\|836905_837616_+	NlpC/P60 family	F1C573	Cronobacter_phage	5.6e-96	68.9
VDZ82854.1\|837615_838203_+\|tail	Phage-related protein, tail component	A0A1P8DTG7	Proteus_phage	1.6e-48	49.0
VDZ82855.1\|838256_841436_+	Domain of uncharacterised function (DUF1983)	O64335	Escherichia_phage	0.0e+00	63.2
VDZ82856.1\|841681_841954_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82857.1\|841950_842589_+	Uncharacterised protein	A0A1X7QGJ8	Escherichia_phage	4.5e-12	31.8
VDZ82858.1\|842660_843773_+	Uncharacterised protein	H6WRW6	Salmonella_phage	9.6e-119	61.3
VDZ82859.1\|843778_843943_+	Uncharacterised protein	K7P6M1	Enterobacteria_phage	1.8e-10	91.4
VDZ82860.1\|844009_844408_+	Uncharacterised protein	K7P834	Enterobacteria_phage	8.0e-68	98.5
VDZ82861.1\|845097_845664_-	Isochorismatase family protein yecD	NA	NA	NA	NA
VDZ82862.1\|845930_847718_+\|tRNA	Aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.1e-11	29.1
VDZ82863.1\|847719_848163_+	Dihydroneopterin triphosphate pyrophosphatase	NA	NA	NA	NA
VDZ82864.1\|848191_848935_+	Probable transcriptional regulatory protein YebC	NA	NA	NA	NA
VDZ82865.1\|848969_849491_+	Crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.6e-10	35.1
VDZ82866.1\|849572_850184_+	Holliday junction ATP-dependent DNA helicase RuvA	NA	NA	NA	NA
VDZ82867.1\|850192_851203_+	Holliday junction ATP-dependent DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.5e-09	25.2
VDZ82868.1\|851369_851822_+	Uncharacterised protein	NA	NA	NA	NA
VDZ82869.1\|851904_852693_-	High-affinity zinc uptake system membrane protein znuB	NA	NA	NA	NA
VDZ82870.1\|852689_853445_-	Zinc import ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.1e-17	30.0
VDZ82871.1\|853522_854482_+	High-affinity zinc uptake system protein znuA precursor	NA	NA	NA	NA
VDZ82872.1\|854494_855814_+	Glycyl-glycine endopeptidase lytM precursor	A8ATH6	Listeria_phage	2.0e-14	36.8
VDZ82873.1\|855945_856923_+	Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA
VDZ82874.1\|857061_858504_-	Pyruvate kinase II	NA	NA	NA	NA
VDZ82875.1\|858615_859575_-	Uncharacterized HTH-type transcriptional regulator ybbH	NA	NA	NA	NA
VDZ82876.1\|859882_861358_+	Glucose-6-phosphate 1-dehydrogenase	H6WFS4	Cyanophage	1.9e-77	37.1
VDZ82877.1\|861592_863404_+	Dihydroxy-acid dehydratase	NA	NA	NA	NA
VDZ82878.1\|863443_864085_+	KHG/KDPG aldolase	NA	NA	NA	NA
VDZ82879.1\|864161_864476_-	Phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
VDZ82880.1\|864444_865341_-	Phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
VDZ82881.1\|865522_866164_+	Inner membrane protein yebE	NA	NA	NA	NA
VDZ82882.1\|866234_867866_+	Protease 2	NA	NA	NA	NA
VDZ82883.1\|867843_868299_+	Protease 2	NA	NA	NA	NA
VDZ82884.1\|868299_868959_-	Exodeoxyribonuclease 10	A0A0H4IT92	Pseudoalteromonas_phage	2.5e-13	30.7
VDZ82885.1\|868982_869651_-	NAD synthetase	NA	NA	NA	NA
VDZ82886.1\|869739_869970_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.4e-16	61.8
VDZ82887.1\|870101_870482_+	Copper resistance protein CopC	NA	NA	NA	NA
VDZ82888.1\|870484_871354_+	Inner membrane protein YebZ	NA	NA	NA	NA
VDZ82889.1\|871317_871707_+	Protein of uncharacterised function (DUF2511)	NA	NA	NA	NA
VDZ82890.1\|872442_873378_+	Lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	6.5e-76	51.7
VDZ82891.1\|873412_873652_-	Protein of uncharacterised function (DUF1480)	NA	NA	NA	NA
VDZ82892.1\|873763_874432_-	Ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
VDZ82893.1\|874455_874890_-	Ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
VDZ82894.1\|874846_875158_-	Ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
VDZ82895.1\|875282_875552_-	Uncharacterised protein	NA	NA	NA	NA
VDZ82896.1\|875559_876267_-	paraquat-inducible protein B	NA	NA	NA	NA
VDZ82897.1\|876238_877918_-	paraquat-inducible protein B	NA	NA	NA	NA
VDZ82898.1\|877886_879170_-	Inner membrane protein yebS	NA	NA	NA	NA
VDZ82899.1\|879313_879811_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA
VDZ82900.1\|879908_880601_+	ProP effector	NA	NA	NA	NA
VDZ82901.1\|880620_882669_+\|protease	Tail-specific protease precursor	A0A0R6PIZ1	Moraxella_phage	6.1e-87	33.5

DBSCAN-SWA_7

1066315 : 1071970

Salmonella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ83089.1\|1066315_1067062_-	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.0e-108	76.6
VDZ83090.1\|1067042_1067585_-	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	3.0e-73	77.0
VDZ83091.1\|1067808_1068012_-	Putative selenoprotein ydfZ	J9Q802	Salmonella_phage	1.5e-22	71.6
VDZ83092.1\|1068185_1068374_-	Uncharacterised protein	NA	NA	NA	NA
VDZ83093.1\|1068697_1068943_-	Uncharacterised protein	NA	NA	NA	NA
VDZ83094.1\|1069144_1069702_-	transcriptional regulator FimZ	NA	NA	NA	NA
VDZ83095.1\|1069915_1070293_-\|transposase	IS1 transposase	Q71TF0	Escherichia_phage	1.7e-67	99.2
VDZ83096.1\|1070364_1070580_+	Uncharacterised protein	NA	NA	NA	NA
VDZ83097.1\|1070822_1071101_+	Transposase	U5P4I9	Shigella_phage	1.3e-32	91.2
VDZ83098.1\|1071157_1071970_+\|transposase	IS2 transposase TnpB	U5P429	Shigella_phage	2.1e-147	93.0

DBSCAN-SWA_8

1183392 : 1188662

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ83214.1\|1183392_1184097_-	FMN-dependent NADPH-azoreductase	A0A2H4J5V6	uncultured_Caudovirales_phage	8.8e-86	72.9
VDZ83215.1\|1184183_1184504_+	Arsenical resistance operon repressor	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	53.7
VDZ83216.1\|1184549_1184993_+	Arsenic efflux pump protein	A0A2H4J144	uncultured_Caudovirales_phage	3.2e-49	76.1
VDZ83217.1\|1184970_1185840_+	Arsenic efflux pump protein	A0A2H4J144	uncultured_Caudovirales_phage	2.0e-108	68.3
VDZ83218.1\|1185852_1186278_+	Arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.7
VDZ83219.1\|1186337_1187165_-	Universal stress protein family	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-43	37.2
VDZ83220.1\|1187183_1188662_-	Putative sulfate transporter ychM	A0A2H4J153	uncultured_Caudovirales_phage	7.3e-199	74.4

DBSCAN-SWA_9

1287623 : 1295616

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ83313.1\|1287623_1288643_-	Sorbitol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	7.4e-09	41.3
VDZ83314.1\|1288903_1289230_-	Uncharacterised BCR, YnfA/UPF0060 family	A0A218MNG8	uncultured_virus	5.1e-20	51.0
VDZ83315.1\|1289381_1289723_+	Protein of uncharacterised function (DUF1283)	NA	NA	NA	NA
VDZ83316.1\|1289756_1290467_-	lipoprotein	NA	NA	NA	NA
VDZ83317.1\|1290570_1290825_+	Protein of uncharacterised function (DUF1161)	NA	NA	NA	NA
VDZ83318.1\|1291032_1292946_+	Dimethyl sulfoxide reductase DmsA precursor	A0A077SK27	Escherichia_phage	4.0e-157	47.5
VDZ83319.1\|1293185_1293467_+	Dimethyl sulfoxide reductase DmsA precursor	A0A077SK27	Escherichia_phage	9.7e-28	64.1
VDZ83320.1\|1293477_1294095_+	DMSO reductase iron-sulfur subunit	A0A077SL61	Escherichia_phage	2.2e-72	57.1
VDZ83321.1\|1294096_1294954_+	DMSO reductase anchor subunit	A0A077SK59	Escherichia_phage	1.2e-20	31.5
VDZ83322.1\|1295001_1295616_+	Twin-arginine leader-binding protein DmsD	A0A077SLS7	Escherichia_phage	2.4e-26	34.7

DBSCAN-SWA_10

1587700 : 1597196

Salmonella_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ83647.1\|1587700_1587916_-	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.3e-27	84.5
VDZ83648.1\|1588050_1588950_-	Stalked cell differentiation-controlling protein	NA	NA	NA	NA
VDZ83649.1\|1589413_1589683_-	Uncharacterised protein	I6R0Q9	Salmonella_phage	2.5e-09	58.5
VDZ83650.1\|1590233_1590515_-	Uncharacterised protein	K7P7B1	Enterobacteria_phage	1.4e-31	83.1
VDZ83651.1\|1590533_1590731_-	Uncharacterised protein	A0A1V0E5M2	Salmonella_phage	4.9e-18	78.5
VDZ83652.1\|1590949_1591450_-	Uncharacterised protein	NA	NA	NA	NA
VDZ83653.1\|1591511_1592009_-	Helix-turn-helix	NA	NA	NA	NA
VDZ83654.1\|1591995_1592211_-	Uncharacterised protein	NA	NA	NA	NA
VDZ83655.1\|1592907_1593231_-	Uncharacterised protein	A0A286MN80	Klebsiella_phage	4.5e-21	49.5
VDZ83656.1\|1593230_1593740_-	Domain of uncharacterised function (DUF1983)	O64335	Escherichia_phage	5.1e-59	73.5
VDZ83657.1\|1594186_1595437_-	Isocitrate dehydrogenase [NADP]	Q77Z09	Phage_21	8.8e-20	92.6
VDZ83658.1\|1595651_1596299_+	Ribosomal large subunit pseudouridine synthase E	NA	NA	NA	NA
VDZ83659.1\|1596350_1597196_-	curli production assembly/transport protein CsgG	M1ICK2	Pelagibacter_phage	8.0e-41	37.1

DBSCAN-SWA_11

2213424 : 2259996

Salmonella_phage(31.15%)

holin,tail,head,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ84301.1\|2213424_2214201_-	Phage anti-repressor protein	H6WRU9	Salmonella_phage	1.2e-67	58.3
VDZ84302.1\|2214284_2215010_-	Uncharacterized phage-encoded protein	H6WRU8	Salmonella_phage	3.4e-109	84.7
VDZ84303.1\|2214999_2215173_-	Uncharacterised protein	H6WRU7	Salmonella_phage	9.2e-21	89.5
VDZ84304.1\|2215284_2215653_+	Arc-like DNA binding domain	H6WRU6	Salmonella_phage	2.5e-15	79.2
VDZ84305.1\|2215878_2216979_+	Uncharacterized protein conserved in bacteria	Q716G0	Shigella_phage	3.2e-18	26.3
VDZ84306.1\|2216987_2218595_-	Uncharacterised protein	Q0H8C6	Salmonella_phage	6.3e-164	57.0
VDZ84307.1\|2218927_2221405_-	Uncharacterised protein	F1C5A7	Cronobacter_phage	0.0e+00	84.0
VDZ84308.1\|2221391_2221808_-	NlpC/P60 family	F1C5F2	Cronobacter_phage	1.2e-69	88.2
VDZ84309.1\|2221770_2222241_-	Uncharacterised protein	F1C5F1	Cronobacter_phage	1.8e-74	89.1
VDZ84310.1\|2222240_2222738_-	Uncharacterised protein	F1C5F0	Cronobacter_phage	8.7e-88	89.1
VDZ84311.1\|2222737_2223328_-	Uncharacterised protein	F1C5E9	Cronobacter_phage	5.0e-42	71.1
VDZ84312.1\|2223284_2225429_-\|tail	Phage-related minor tail protein	A0A1B1W284	Salmonella_phage	3.4e-72	37.4
VDZ84313.1\|2225487_2226162_-	Uncharacterised protein	G0ZNE7	Cronobacter_phage	6.9e-72	58.4
VDZ84314.1\|2226212_2226863_-	Bacterial Ig-like domain (group 2)	G0ZNE6	Cronobacter_phage	1.2e-23	36.0
VDZ84315.1\|2226807_2226972_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84316.1\|2227036_2227426_-	Uncharacterised protein	G0ZNE4	Cronobacter_phage	2.1e-33	51.9
VDZ84317.1\|2227422_2227791_-	Uncharacterised protein	F1C5E3	Cronobacter_phage	1.0e-45	73.8
VDZ84318.1\|2227793_2228141_-	Uncharacterised protein	G0ZNE2	Cronobacter_phage	1.0e-34	63.5
VDZ84319.1\|2228140_2228314_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84320.1\|2228313_2228694_-	Uncharacterised protein	F1C5E2	Cronobacter_phage	8.2e-30	54.8
VDZ84321.1\|2228696_2229062_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84322.1\|2229071_2229725_-	Uncharacterised protein	F1C5E1	Cronobacter_phage	7.7e-76	70.1
VDZ84323.1\|2229669_2230158_-	Uncharacterised protein	F1C5E1	Cronobacter_phage	6.8e-69	81.5
VDZ84324.1\|2230168_2230603_-	Uncharacterised protein	F1C5E0	Cronobacter_phage	6.9e-49	71.7
VDZ84325.1\|2230606_2231794_-	Uncharacterised protein	F1C5D9	Cronobacter_phage	9.3e-96	48.7
VDZ84326.1\|2232286_2233276_-\|head	phage head morphogenesis protein, SPP1 gp7 family	F1C5D8	Cronobacter_phage	2.2e-114	67.8
VDZ84327.1\|2233217_2234687_-	Protein of uncharacterised function (DUF1073)	F1C5D7	Cronobacter_phage	1.1e-149	57.8
VDZ84328.1\|2234699_2235083_-	Uncharacterised protein	A0A2H4J2I1	uncultured_Caudovirales_phage	5.0e-43	73.4
VDZ84329.1\|2235024_2235207_-	Uncharacterised protein	A0A2H4J8J8	uncultured_Caudovirales_phage	3.1e-27	89.7
VDZ84330.1\|2235160_2235505_-	Uncharacterised protein	A0A1W6JNY3	Morganella_phage	1.5e-38	82.8
VDZ84331.1\|2235832_2236180_-	Uncharacterised protein	A0A1W6JNY3	Morganella_phage	3.6e-48	80.5
VDZ84332.1\|2236179_2236695_-	Uncharacterised protein	A0A0H5AUE2	Pseudomonas_phage	1.0e-51	62.8
VDZ84333.1\|2236706_2236886_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84334.1\|2236860_2237079_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84335.1\|2237071_2237224_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84336.1\|2237348_2237870_-	ORF11CD3 domain	K7P7K9	Enterobacteria_phage	7.0e-88	92.4
VDZ84337.1\|2238069_2238543_-\|lysis	Bacteriophage lysis protein	Q8HA85	Salmonella_phage	6.0e-38	54.7
VDZ84338.1\|2238539_2238989_-	Phage-related lysozyme (muraminidase)	A0A0M4R365	Salmonella_phage	6.9e-68	84.6
VDZ84339.1\|2238978_2239296_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.5e-37	74.0
VDZ84340.1\|2240002_2240686_-	Uncharacterised protein	Q8HA89	Salmonella_phage	2.1e-39	42.7
VDZ84341.1\|2240682_2241264_-	Bacteriophage Lambda NinG protein	K7PHP1	Enterobacterial_phage	2.1e-40	42.5
VDZ84342.1\|2241256_2241706_-	NinB protein	Q8VNP6	Enterobacteria_phage	7.4e-38	51.7
VDZ84343.1\|2241939_2242221_-	Uncharacterised protein	A5VWB6	Enterobacteria_phage	2.3e-37	79.3
VDZ84344.1\|2242309_2243014_-	Uncharacterised protein	A0A193GYX5	Enterobacter_phage	2.1e-15	49.4
VDZ84345.1\|2243010_2243427_-	Uncharacterised protein	E7EKU5	Edwardsiella_phage	1.2e-58	73.3
VDZ84346.1\|2243426_2243834_-	Uncharacterised protein	A0A2H4FRZ0	Salmonella_phage	1.5e-13	55.7
VDZ84347.1\|2243830_2244052_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84348.1\|2244048_2244213_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84349.1\|2244209_2244479_-	Uncharacterised protein	A0A0F6N6A6	Escherichia_phage	1.3e-08	37.6
VDZ84350.1\|2244475_2244766_-	Uncharacterised protein	A0A0P0ZCJ0	Stx2-converting_phage	6.7e-24	57.4
VDZ84351.1\|2244762_2245644_-	DNA replication protein dnaC	K7PLU3	Enterobacteria_phage	4.6e-108	65.8
VDZ84352.1\|2245646_2246501_-	phage replication protein O, N-terminal domain	K7PGT1	Enterobacteria_phage	3.0e-56	50.9
VDZ84353.1\|2246533_2246833_-	Bacteriophage CII protein	A5VW96	Enterobacteria_phage	1.3e-25	64.8
VDZ84354.1\|2246963_2247179_-	Helix-turn-helix	A0A0N7C2U7	Escherichia_phage	3.3e-28	80.3
VDZ84355.1\|2247327_2247951_+	Uncharacterized HTH-type transcriptional regulator CBU_1416	A0A0N7BTS4	Escherichia_phage	1.1e-103	83.6
VDZ84356.1\|2248020_2248326_+	Uncharacterised protein	NA	NA	NA	NA
VDZ84357.1\|2248329_2248917_+	Uncharacterised protein	NA	NA	NA	NA
VDZ84358.1\|2249000_2249357_+	Uncharacterised protein	A0A1V0E5P9	Salmonella_phage	2.1e-43	74.1
VDZ84359.1\|2249389_2249764_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84360.1\|2250116_2250479_+	Uncharacterised protein	C6ZR44	Salmonella_phage	5.3e-34	63.3
VDZ84361.1\|2250757_2251012_-	Uncharacterised protein	NA	NA	NA	NA
VDZ84362.1\|2251176_2251338_+	Uncharacterised protein	A0A2P1MXC7	Escherichia_phage	6.6e-05	46.0
VDZ84363.1\|2251492_2251702_+	Uncharacterised protein	NA	NA	NA	NA
VDZ84364.1\|2251703_2251874_+	Bacteriophage lambda Kil protein	NA	NA	NA	NA
VDZ84365.1\|2251860_2252073_+	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA
VDZ84366.1\|2252145_2253141_+	Uncharacterised protein	M9P0E1	Enterobacteria_phage	4.4e-38	55.3
VDZ84367.1\|2253149_2253446_+	Host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-32	71.6
VDZ84368.1\|2253446_2253782_+	Exodeoxyribonuclease 8	A0A0M5M5Y6	Salmonella_phage	3.9e-31	57.8
VDZ84369.1\|2253774_2254269_+	Exodeoxyribonuclease 8	A0A0M5M5Y6	Salmonella_phage	8.7e-72	78.0
VDZ84370.1\|2254268_2254838_+	Uncharacterised protein	A0A0M4RD07	Salmonella_phage	6.3e-74	73.5
VDZ84371.1\|2254837_2255131_+	Uncharacterised protein	A0A0M4R304	Salmonella_phage	1.2e-15	45.2
VDZ84372.1\|2255127_2256249_+	Modification methylase HindIII	A0A060D598	Salmonella_phage	3.7e-86	47.6
VDZ84373.1\|2256245_2256464_+	Uncharacterised protein	NA	NA	NA	NA
VDZ84374.1\|2256550_2256901_+	Uncharacterised protein	NA	NA	NA	NA
VDZ84375.1\|2256903_2257113_+	phage/conjugal plasmid C-4 type zinc finger protein, TraR family	M1FQT7	Enterobacteria_phage	2.3e-10	46.3
VDZ84376.1\|2257112_2257298_+	Uncharacterised protein	A0A1B0V7L5	Salmonella_phage	9.0e-06	51.0
VDZ84377.1\|2257627_2258791_+	Tyrosine recombinase XerD	A0A0M4R586	Salmonella_phage	1.8e-200	86.8
VDZ84378.1\|2259129_2259996_+	Bifunctional protein FolD	A0A249XZQ2	Enterococcus_phage	1.1e-29	35.2

DBSCAN-SWA_12

3603606 : 3612728

Enterobacteria_phage(100.0%)

integrase

attL 3603662:3603676|attR 3618551:3618565

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ85676.1\|3603606_3605940_-	DNA primase TraC	Q7M2A8	Enterobacteria_phage	0.0e+00	82.1
3603662:3603676	attL	NA	NA	NA	NA
VDZ85677.1\|3605954_3606275_-	Uncharacterised protein	NA	NA	NA	NA
VDZ85678.1\|3606271_3606499_-	Uncharacterised protein	NA	NA	NA	NA
VDZ85679.1\|3607049_3607316_-	Predicted transcriptional regulator	Q7M299	Enterobacteria_phage	8.3e-29	70.5
VDZ85680.1\|3607867_3608671_+	Uncharacterised protein	Q7M2A2	Enterobacteria_phage	8.7e-13	27.6
VDZ85681.1\|3608667_3608910_+	DNA-binding transcriptional regulator	Q7M294	Enterobacteria_phage	8.4e-20	58.0
VDZ85682.1\|3608925_3609501_+	Phage polarity suppression protein (Psu)	Q7M2A1	Enterobacteria_phage	1.1e-38	50.8
VDZ85683.1\|3609734_3611519_-	Uncharacterised protein	NA	NA	NA	NA
VDZ85684.1\|3611552_3612728_-\|integrase	Putative prophage CPS-53 integrase	Q7M297	Enterobacteria_phage	4.1e-205	89.9
3618551:3618565	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3776161 : 3782843

Enterobacteria_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ85843.1\|3776161_3776866_-	Integrase core domain	A0A077SL39	Escherichia_phage	1.8e-139	100.0
VDZ85844.1\|3777125_3778316_+	Transposase	A0A1B1P773	Bacillus_phage	2.5e-24	37.8
VDZ85845.1\|3778312_3779125_-\|transposase	IS2 transposase TnpB	U5P429	Shigella_phage	2.1e-147	93.0
VDZ85846.1\|3779181_3779460_-	Transposase	U5P4I9	Shigella_phage	1.3e-32	91.2
VDZ85847.1\|3779504_3780347_-	Transposase and inactivated derivatives, TnpA family	Q1MVP5	Enterobacteria_phage	7.6e-76	53.6
VDZ85848.1\|3780450_3780990_-	Transposase and inactivated derivatives, TnpA family	Q1MVP5	Enterobacteria_phage	3.5e-50	56.8
VDZ85849.1\|3781088_3781793_+	Integrase core domain	A0A077SL39	Escherichia_phage	1.8e-139	100.0
VDZ85850.1\|3781868_3782843_+	Transposase and inactivated derivatives	U5N3F9	Enterobacteria_phage	8.3e-175	91.9

DBSCAN-SWA_14

4712989 : 4722801

Stx2-converting_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ86814.1\|4712989_4714675_-	Mercuric reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
VDZ86815.1\|4714713_4715139_-	putative mercury transport protein MerC	NA	NA	NA	NA
VDZ86816.1\|4715166_4715442_-	Periplasmic mercury ion-binding protein	NA	NA	NA	NA
VDZ86817.1\|4715457_4715853_-	putative mercuric transport protein	NA	NA	NA	NA
VDZ86818.1\|4715924_4716380_+	Mercuric resistance operon regulatory protein	NA	NA	NA	NA
VDZ86819.1\|4716486_4716762_+	Uncharacterised protein	NA	NA	NA	NA
VDZ86820.1\|4716718_4716937_+	Uncharacterised protein	NA	NA	NA	NA
VDZ86821.1\|4716865_4717552_-	Transposase and inactivated derivatives, IS30 family	W5R8L2	Staphylococcus_phage	1.0e-30	41.3
VDZ86822.1\|4717613_4717955_+	Transposase	A0A0P0ZCV4	Stx2-converting_phage	3.2e-57	98.2
VDZ86823.1\|4717951_4718299_+	Transposase and inactivated derivatives	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
VDZ86824.1\|4718347_4719499_+	Transposase and inactivated derivatives	A0A0P0ZEB3	Stx2-converting_phage	1.5e-199	94.6
VDZ86825.1\|4719455_4719887_+	Transposase and inactivated derivatives	A0A0P0ZEB3	Stx2-converting_phage	5.4e-70	90.2
VDZ86826.1\|4720072_4720507_-	Probable copper-binding protein pcoE precursor	NA	NA	NA	NA
VDZ86827.1\|4720722_4721046_-	Sensor kinase CusS	W8CYF6	Bacillus_phage	2.8e-10	33.7
VDZ86828.1\|4721077_4722124_-	Sensor kinase CusS	NA	NA	NA	NA
VDZ86829.1\|4722120_4722801_-	Transcriptional activator protein CopR	W8CYM9	Bacillus_phage	8.7e-30	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134138

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection