CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134140	Salmonella enterica subsp. enterica strain NCTC129 genome assembly, chromosome: 1	2 crisprs	DEDDh,DinG,WYL,c2c9_V-U4,PD-DExK,cas3,cas14j,csa3	0	30	23	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134140_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134140_1

3474896-3476143

Orphan

I-E:NA

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
NGTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

20 spacers

The CRISPR arrays of LR134140_1

>merge|LR134140|1|3474896-3476143|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTGGCGGCAAAAGAACTCGCTAAATGGGAAGTGTTCCCGCGCCAGCGGGGATAAACCGCAGTGCGGCAGCGCGCAATCGAGACACGCCATGTGTTCCCCGCGCCAGCGGGATAAACCGCACAAAACGCCAGTGGCATGGTACAACCCGTAGTGTTCCCCGCGCCAGCGGGGGATAAACCGGCGTGACCATGTTTAACTCTAAATCAGGCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCATGCTTTCGACTAAATACTACCGCGACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATAACAACATTATCAGTGTGAAAAGTCTCGTGTTCCCCGCGCCAGCGGGGGATAAACCGAGATATGAAAAACGTAAAAATTTACACCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGAAGAACGGCCAGCCCGTCGAGGTATCAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGTCGTTGCTGGACAGAACTCCGGGGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTACGGGCATGGACGGCTCGTACAGTTTTGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTCCGCTTCTGGTAGTGCTTCCAGACCCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATAGGACAGCCATTCGAGCGCCCAGAGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAGTATGCACTGCTTGATAAAGTCAGGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTAACGTCTATAGCTAAATGTAGAGAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTTTGGAGTCAATGTTATTTCTTCAGGTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTCGCTGGTTGCTCCAACTCCTGATATGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAAATCTTCTTTCATATAACCGTAAGGGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTGCTCTATGTCTAAAAATAAAAGCGGTTCGTGTTCCCTGCGCCAGCGGGGATAAACCCAGCACAATCATTATTAGATGAACTTTCATCAAGTGTTCCCCGCGCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGCCAACAAGGATAGCCGT

>LR134140|1|1|3474896-3476074|PILER-CR
GTGTTCCCCGCGCCAGCGGGG	ATAAACCGTGCTGGCGGCAAAAGAACTCGCTAAATGGGAAGTGTT
CCCGCGCCAGCGGGGATAAAC	CGCAGTGCGGCAGCGCGCAATCGAGACACGCCATGTGTTC
CCCGCGCCAGCGGGATAAACC	GCACAAAACGCCAGTGGCATGGTACAACCCGTAGTGTTC
CCCGCGCCAGCGGGGGATAAA	CCGGCGTGACCATGTTTAACTCTAAATCAGGCCGTGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGTCATGCTTTCGACTAAATACTACCGCGACAACGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGAAAATAACAACATTATCAGTGTGAAAAGTCTCGTGTTC
CCCGCGCCAGCGGGGGATAAA	CCGAGATATGAAAAACGTAAAAATTTACACCGCCAGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGTGAAGAACGGCCAGCCCGTCGAGGTATCAATCGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGCGTTGTCGTTGCTGGACAGAACTCCGGGGACGGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGTACGGGCATGGACGGCTCGTACAGTTTTGACGGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGTGCTCCGCTTCTGGTAGTGCTTCCAGACCCTCGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGCAATAGGACAGCCATTCGAGCGCCCAGAGTTTGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGGTCAGTATGCACTGCTTGATAAAGTCAGGCCAGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGAACTAACGTCTATAGCTAAATGTAGAGAAAACGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGCAGTTTGGAGTCAATGTTATTTCTTCAGGTCAGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGTCTCGCTGGTTGCTCCAACTCCTGATATGCCGGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGTAAAAATCTTCTTTCATATAACCGTAAGGGTTGTGTTC
CCCGCGCCAGCGGGGATAAAC	CGCGGTGCTCTATGTCTAAAAATAAAAGCGGTTCGTGTTC
CCTGCGCCAGCGGGGATAAAC	CCAGCACAATCATTATTAGATGAACTTTCATCAAGTGTTC
CCCGCGCAGCGGGG

>LR134140|1|1|3474896-3476143|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTGGCGGCAAAAGAACTCGCTAAATGGGA
AGTGTTCCCGCGCCAGCGGGGATAAACCG	CAGTGCGGCAGCGCGCAATCGAGACACGCCAT
GTGTTCCCCGCGCCAGCGGGATAAACCGC	ACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GGCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GAGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAGAACGGCCAGCCCGTCGAGGTATCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGTCGTTGCTGGACAGAACTCCGGGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACGGGCATGGACGGCTCGTACAGTTTTGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCCGCTTCTGGTAGTGCTTCCAGACCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCA
AGTGTTCCCCGCGCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>LR134140|1|1|3474896-3476142|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTGGCGGCAAAAGAACTCGCTAAATGGGA
AGTGTTCCCGCGCCAGCGGGGATAAACCG	CAGTGCGGCAGCGCGCAATCGAGACACGCCAT
GTGTTCCCCGCGCCAGCGGGATAAACCGC	ACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GGCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GAGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAGAACGGCCAGCCCGTCGAGGTATCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGTCGTTGCTGGACAGAACTCCGGGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACGGGCATGGACGGCTCGTACAGTTTTGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCCGCTTCTGGTAGTGCTTCCAGACCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCA
AGTGTTCCCCGCGCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCG
TGTGTTCCCCGCGCCAACAAGGATAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
LR134140.1\|VDZ98266.1\|3469739_3470540_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LR134140.1\|VDZ98274.1\|3476240_3477002_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LR134140.1\|VDZ98267.1\|3471148_3472408_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LR134140.1\|VDZ98263.1\|3464978_3465752_-\|chaperone-protein-PapD	unknown	unknown	gnl\|CDD\|185177
LR134140.1\|VDZ98268.1\|3472490_3473612_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LR134140.1\|VDZ98272.1\|3474628_3474775_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134140.1\|VDZ98282.1\|3485041_3486001_-\|Domain-of-uncharacterised-function-(DUF2825)	unknown	unknown	unknown
LR134140.1\|VDZ98278.1\|3479711_3480014_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LR134140.1\|VDZ98276.1\|3477911_3478691_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LR134140.1\|VDZ98265.1\|3468543_3469131_-\|fimbrial-subunit	unknown	unknown	gnl\|CDD\|185169
LR134140.1\|VDZ98280.1\|3481500_3482235_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LR134140.1\|VDZ98271.1\|3474364_3474598_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LR134140.1\|VDZ98269.1\|3473562_3473790_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LR134140.1\|VDZ98283.1\|3486002_3486233_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LR134140.1\|VDZ98275.1\|3477124_3477487_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LR134140.1\|VDZ98279.1\|3479979_3481425_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LR134140.1\|VDZ98277.1\|3478638_3479712_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LR134140.1\|VDZ98264.1\|3465764_3468410_-\|outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
LR134140.1\|VDZ98281.1\|3482447_3483401_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LR134140.1\|VDZ98270.1\|3473925_3474363_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
LR134140.1\|VDZ98266.1\|3469739_3470540_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
LR134140.1\|VDZ98275.1\|3477124_3477487_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LR134140.1\|VDZ98267.1\|3471148_3472408_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LR134140.1\|VDZ98263.1\|3464978_3465752_-\|chaperone-protein-PapD	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
LR134140.1\|VDZ98268.1\|3472490_3473612_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LR134140.1\|VDZ98278.1\|3479711_3480014_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	2.36059e-49
LR134140.1\|VDZ98276.1\|3477911_3478691_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	1.20173e-148
LR134140.1\|VDZ98265.1\|3468543_3469131_-\|fimbrial-subunit	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
LR134140.1\|VDZ98280.1\|3481500_3482235_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40417e-137
LR134140.1\|VDZ98271.1\|3474364_3474598_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	4.35888e-49
LR134140.1\|VDZ98269.1\|3473562_3473790_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	7.92014e-48
LR134140.1\|VDZ98283.1\|3486002_3486233_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	1.33438e-47
LR134140.1\|VDZ98274.1\|3476240_3477002_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.97812e-99
LR134140.1\|VDZ98279.1\|3479979_3481425_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LR134140.1\|VDZ98277.1\|3478638_3479712_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LR134140.1\|VDZ98264.1\|3465764_3468410_-\|outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
LR134140.1\|VDZ98281.1\|3482447_3483401_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LR134140.1\|VDZ98270.1\|3473925_3474363_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	4.61377e-96

>LR134140.1|VDZ98272.1|3474628_3474775_+|Uncharacterised-protein
MPSVTHPLPCIVYFLYVNFDECIKALINFSIAMHGSRYFGKFKEKIIL
>LR134140.1|VDZ98271.1|3474364_3474598_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LR134140.1|VDZ98270.1|3473925_3474363_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGL
>LR134140.1|VDZ98269.1|3473562_3473790_+|enolase
MAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LR134140.1|VDZ98268.1|3472490_3473612_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSIPDQIQPDRFSDRNSGCNQDGERRWLYCCHLSPFW
>LR134140.1|VDZ98267.1|3471148_3472408_+|CTP-synthetase
MLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRNEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>LR134140.1|VDZ98266.1|3469739_3470540_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LR134140.1|VDZ98265.1|3468543_3469131_-|fimbrial-subunit
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>LR134140.1|VDZ98264.1|3465764_3468410_-|outer-membrane-usher-protein
MLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESSYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKILEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>LR134140.1|VDZ98263.1|3464978_3465752_-|chaperone-protein-PapD
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>LR134140.1|VDZ98274.1|3476240_3477002_+|beta-lactamase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGGCGYRK
>LR134140.1|VDZ98275.1|3477124_3477487_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LR134140.1|VDZ98276.1|3477911_3478691_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPFAIRRYWRGKRHPHQPLYQRRAAGRDPLRESENHRSQLGKRCASY
>LR134140.1|VDZ98277.1|3478638_3479712_+|sulfite-reductase-subunit-alpha
MNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LR134140.1|VDZ98278.1|3479711_3480014_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGGDYYDAMAGDR
>LR134140.1|VDZ98279.1|3479979_3481425_+|sulfite-reductase-subunit-beta
MITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LR134140.1|VDZ98280.1|3481500_3482235_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRTDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LR134140.1|VDZ98281.1|3482447_3483401_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>LR134140.1|VDZ98282.1|3485041_3486001_-|Domain-of-uncharacterised-function-(DUF2825)
MLVKRVYPRWRGEHDEQHARTGVTYGLSPLARGTPLAGDMGVPLERFIPAGAGNTYPACDRDSFPAVYPRWRGNTVVSERNINKPPGLSPLARGTRILSLPAEELARGTHEVLIVHFKYSRFIPAGAGNTATAGSPSGRPAVYPRWRGEHEVAKYCQRDFFGLSPLARGTRPCEFQSAFSPRFIPAGAGTLYQSVNIFHLLRFIPAGAGNTVRSRSSRHTSPVYPRWRGEHDCTGGEYGTADGLSPAGAGNTKFPPWIFRLLVVYPRWRGEHNTDVFHAAAVCGLSPLARGTPNSNCKILLFNRFIPAGAGNTGSAPTT
>LR134140.1|VDZ98283.1|3486002_3486233_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS

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Crispr_ID: LR134140_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134140_2

3484089-3485642

Orphan

I-E

Consensus_repeat	Method
TTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

25 spacers

The CRISPR arrays of LR134140_2

>merge|LR134140|2|3484089-3485642|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGGGCGCCCGGATTGTTTGCGTGCGGCGACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTACCCGCCACTTATTCCCCATTGCATGTGTTCCCCGCGCCAGCGGGGATAAATCGGGACTATCAAACCATCTATGATGCCAATTTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGGGGCTGGTATTCGATACAGACCCGGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAATAAAAATGAATTTGAGTCAACTCTATAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTAGGCTGCGGTTGGGCACCGAAGAAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGATTATCCCGGAAATCGTGATCAACTACGCAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCATTCCCGATCGTCAACCAGAGAACTGGCACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACCCGCGCCCGTGAGCTCGATATGCTCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGTTATTGCGGTAACGGATAATTTATCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGGCGATCGCATTTGGGTGCGGGAAACATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAATATGGTGATAATGTTGCACCTTCGCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGACTCGGCCTGTTTTTTGATTTTGACAATCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAATAACCGACGAGGGCAAACGCCGTGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGAAAATCAGCCCGCATATTCCGACACAGTGTTCCCCGCGCCAGCGGGATAAACCGAACAGTGGTTTTAGGTTGTCGGTGCTGATCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAACAACAGGATTTTGCAATTACTGTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGGCAGCAGCGTGAAACACGTCAGTATTGTGTTCCCCGCGCCAGCGGGGATAAACCACCAATAACCGAAATATCCACGGTGGAAATTTCGTGTTCCCCGCGCCAGCGGGGGATAAACCGTCAGCTGTTCCATACTCACCCCCTGTGCAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATGTATGCCGCGACGATCGAGAGCGAACTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCAGATGAAAAATATTTACAGATTGGTAAAGTGTTCCCGCGCCAGCGGGGATAAACCGGGGCGAAAACGCGCTTTGAAATTCGCACGGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATCCCGCTGACAATATTTTGCCACCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGACGACCCGATGGGGATCCTGCCGTTGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGG

>LR134140|2|2|3484089-3485638|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGTGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGTTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGGGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGGCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGAAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGGACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGATAAAC	CGAACAGTGGTTTTAGGTTGTCGGTGCTGATCCCGTGTTC
CCCGCGCCAGCGGGGATAAACCGATT	AAACAACAGGATTTTGCAATTACTGTTGGGTGTTC
CCCGCGCCAGCGGGGATAAACCGCAG	ACGGCAGCAGCGTGAAACACGTCAGTATTGTGTTC
CCCGCGCCAGCGGGGATAAACCACCA	ATAACCGAAATATCCACGGTGGAAATTTCGTGTTC
CCCGCGCCAGCGGGGGATAAACCGTC	AGCTGTTCCATACTCACCCCCTGTGCAATCGTGTTCCCCGC
GCCAGCGGGGATAAACCGGCGATGTA	TGCCGCGACGATCGAGAGCGAACTGTGTTCCCCGC
GCCAGCGGGGATAAACCGCAGCAGAT	GAAAAATATTTACAGATTGGTAAAGTGTTCCCGCGCCAGC
GGGGATAAACCGGGGCGAAAACGCGC	TTTGAAATTCGCACGGTCGTGTTCCCCGCGCCAGC
GGGGATAAACCGAAAAAATCCCGCTG	ACAATATTTTGCCACCTCGTGTTCCCCGCGCCAGC
GGGGATAAACCGCCGGACGACCCGAT	GGGGATCCTGCCGTTGCTGTGTTCCCCGCGCCAGC
GGGGATAAA

>LR134140|2|2|3484089-3485642|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGATAAACCGA	ACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	CCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GTCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAA
AGTGTTCCCGCGCCAGCGGGGATAAACCG	GGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCGG

>LR134140|2|2|3484089-3485641|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGATAAACCGA	ACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	CCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GTCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAA
AGTGTTCCCGCGCCAGCGGGGATAAACCG	GGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
LR134140.1\|VDZ98289.1\|3490811_3491123_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LR134140.1\|VDZ98275.1\|3477124_3477487_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LR134140.1\|VDZ98281.1\|3482447_3483401_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277
LR134140.1\|VDZ98286.1\|3488215_3489655_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LR134140.1\|VDZ98278.1\|3479711_3480014_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LR134140.1\|VDZ98284.1\|3486447_3487047_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LR134140.1\|VDZ98276.1\|3477911_3478691_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LR134140.1\|VDZ98285.1\|3487297_3488206_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LR134140.1\|VDZ98291.1\|3491851_3492331_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LR134140.1\|VDZ98290.1\|3491141_3491852_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LR134140.1\|VDZ98292.1\|3492327_3493377_+\|tRNA-pseudouridine-13-synthase	unknown	unknown	gnl\|CDD\|234884
LR134140.1\|VDZ98287.1\|3489641_3490247_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LR134140.1\|VDZ98283.1\|3486002_3486233_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LR134140.1\|VDZ98288.1\|3490297_3490621_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LR134140.1\|VDZ98274.1\|3476240_3477002_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LR134140.1\|VDZ98279.1\|3479979_3481425_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LR134140.1\|VDZ98277.1\|3478638_3479712_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LR134140.1\|VDZ98280.1\|3481500_3482235_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LR134140.1\|VDZ98273.1\|3475124_3475610_-\|Domain-of-uncharacterised-function-(DUF2825)	unknown	unknown	unknown
LR134140.1\|VDZ98272.1\|3474628_3474775_+\|Uncharacterised-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
LR134140.1\|VDZ98289.1\|3490811_3491123_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
LR134140.1\|VDZ98275.1\|3477124_3477487_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LR134140.1\|VDZ98281.1\|3482447_3483401_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
LR134140.1\|VDZ98286.1\|3488215_3489655_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LR134140.1\|VDZ98278.1\|3479711_3480014_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	2.36059e-49
LR134140.1\|VDZ98284.1\|3486447_3487047_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	7.13062e-146
LR134140.1\|VDZ98276.1\|3477911_3478691_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	1.20173e-148
LR134140.1\|VDZ98280.1\|3481500_3482235_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40417e-137
LR134140.1\|VDZ98291.1\|3491851_3492331_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
LR134140.1\|VDZ98290.1\|3491141_3491852_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.96864e-119
LR134140.1\|VDZ98292.1\|3492327_3493377_+\|tRNA-pseudouridine-13-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LR134140.1\|VDZ98287.1\|3489641_3490247_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
LR134140.1\|VDZ98283.1\|3486002_3486233_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	1.33438e-47
LR134140.1\|VDZ98288.1\|3490297_3490621_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
LR134140.1\|VDZ98274.1\|3476240_3477002_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.97812e-99
LR134140.1\|VDZ98277.1\|3478638_3479712_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LR134140.1\|VDZ98285.1\|3487297_3488206_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LR134140.1\|VDZ98279.1\|3479979_3481425_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>LR134140.1|VDZ98281.1|3482447_3483401_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>LR134140.1|VDZ98280.1|3481500_3482235_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRTDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LR134140.1|VDZ98279.1|3479979_3481425_+|sulfite-reductase-subunit-beta
MITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LR134140.1|VDZ98278.1|3479711_3480014_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGGDYYDAMAGDR
>LR134140.1|VDZ98277.1|3478638_3479712_+|sulfite-reductase-subunit-alpha
MNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LR134140.1|VDZ98276.1|3477911_3478691_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPFAIRRYWRGKRHPHQPLYQRRAAGRDPLRESENHRSQLGKRCASY
>LR134140.1|VDZ98275.1|3477124_3477487_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LR134140.1|VDZ98274.1|3476240_3477002_+|beta-lactamase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGGCGYRK
>LR134140.1|VDZ98273.1|3475124_3475610_-|Domain-of-uncharacterised-function-(DUF2825)
MAVLLRFIPAGAGNTRVWKHYQKRSTVYPRWRGEHRQNCTSRPCPYGLSPLARGTPSPEFCPATTTRFIPAGAGNTIDTSTGWPFFTVYPRWRGEHWRCKFLRFSYLGLSPAGAGNTRLFTLIMLLFSVYPRWRGEHVVAVVFSRKHDGLSPLARGTHGLI
>LR134140.1|VDZ98272.1|3474628_3474775_+|Uncharacterised-protein
MPSVTHPLPCIVYFLYVNFDECIKALINFSIAMHGSRYFGKFKEKIIL
>LR134140.1|VDZ98283.1|3486002_3486233_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>LR134140.1|VDZ98284.1|3486447_3487047_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKIRCW
>LR134140.1|VDZ98285.1|3487297_3488206_+|Sulfate-adenylyltransferase-subunit-2-1
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LR134140.1|VDZ98286.1|3488215_3489655_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LR134140.1|VDZ98287.1|3489641_3490247_+|adenosine-5-phosphosulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>LR134140.1|VDZ98288.1|3490297_3490621_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LR134140.1|VDZ98289.1|3490811_3491123_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>LR134140.1|VDZ98290.1|3491141_3491852_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLADHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>LR134140.1|VDZ98291.1|3491851_3492331_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>LR134140.1|VDZ98292.1|3492327_3493377_+|tRNA-pseudouridine-13-synthase
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALHWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134140_3	3.4\|3485934\|32\|LR134140\|PILER-CR	3485934-3485965	32	NC_004313	Salmonella phage ST64B, complete genome	31961-31992	1	0.969
LR134140_3	3.4\|3485934\|32\|LR134140\|PILER-CR	3485934-3485965	32	KU927493	Salmonella phage 118970_sal3, complete genome	69573-69604	1	0.969
LR134140_3	3.4\|3485934\|32\|LR134140\|PILER-CR	3485934-3485965	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	31961-31992	1	0.969
LR134140_3	3.8\|3485928\|32\|LR134140\|CRISPRCasFinder,CRT	3485928-3485959	32	NC_004313	Salmonella phage ST64B, complete genome	31961-31992	1	0.969
LR134140_3	3.8\|3485928\|32\|LR134140\|CRISPRCasFinder,CRT	3485928-3485959	32	KU927493	Salmonella phage 118970_sal3, complete genome	69573-69604	1	0.969
LR134140_3	3.8\|3485928\|32\|LR134140\|CRISPRCasFinder,CRT	3485928-3485959	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	31961-31992	1	0.969
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90793-90823	4	0.871
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112082	4	0.871
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225001	4	0.871
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271401-271431	5	0.839
LR134140_2	2.11\|3484725\|35\|LR134140\|PILER-CR	3484725-3484759	35	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	5451-5485	5	0.857
LR134140_2	2.36\|3484728\|32\|LR134140\|CRISPRCasFinder,CRT	3484728-3484759	32	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	10331-10362	5	0.844
LR134140_2	2.50\|3485581\|32\|LR134140\|CRISPRCasFinder,CRT	3485581-3485612	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1493565-1493596	5	0.844
LR134140_2	2.50\|3485581\|32\|LR134140\|CRISPRCasFinder,CRT	3485581-3485612	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	917379-917410	5	0.844
LR134140_1	1.36\|3475901\|32\|LR134140\|CRISPRCasFinder,CRT	3475901-3475932	32	MK448383	Streptococcus satellite phage Javan248, complete genome	4976-5007	6	0.812
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33598	6	0.806
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MH319741	Marine virus AG-345-E15 Ga0172270_11 genomic sequence	30961-30992	6	0.812
LR134140_2	2.36\|3484728\|32\|LR134140\|CRISPRCasFinder,CRT	3484728-3484759	32	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	5451-5482	6	0.812
LR134140_1	1.21\|3474985\|32\|LR134140\|CRISPRCasFinder,CRT	3474985-3475016	32	NZ_CP024891	Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence	51303-51334	7	0.781
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052296-2052326	7	0.774
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343728-343758	7	0.774
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	294630-294661	7	0.781
LR134140_2	2.34\|3484606\|32\|LR134140\|CRISPRCasFinder,CRT	3484606-3484637	32	NC_010627	Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence	106855-106886	7	0.781
LR134140_2	2.46\|3485338\|32\|LR134140\|CRISPRCasFinder,CRT	3485338-3485369	32	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	304164-304195	7	0.781
LR134140_2	2.46\|3485338\|32\|LR134140\|CRISPRCasFinder,CRT	3485338-3485369	32	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	194506-194537	7	0.781
LR134140_1	1.27\|3475352\|32\|LR134140\|CRISPRCasFinder,CRT	3475352-3475383	32	KR053200	Gordonia phage GTE6, complete genome	31264-31295	8	0.75
LR134140_1	1.31\|3475596\|32\|LR134140\|CRISPRCasFinder,CRT	3475596-3475627	32	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	272606-272637	8	0.75
LR134140_1	1.39\|3476083\|32\|LR134140\|CRISPRCasFinder	3476083-3476114	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
LR134140_1	1.40\|3476083\|31\|LR134140\|CRT	3476083-3476113	31	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654432	8	0.742
LR134140_2	2.11\|3484725\|35\|LR134140\|PILER-CR	3484725-3484759	35	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	10331-10365	8	0.771
LR134140_2	2.21\|3485346\|35\|LR134140\|PILER-CR	3485346-3485380	35	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1879010-1879044	8	0.771
LR134140_2	2.21\|3485346\|35\|LR134140\|PILER-CR	3485346-3485380	35	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1756035-1756069	8	0.771
LR134140_2	2.34\|3484606\|32\|LR134140\|CRISPRCasFinder,CRT	3484606-3484637	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	573671-573702	8	0.75
LR134140_2	2.46\|3485338\|32\|LR134140\|CRISPRCasFinder,CRT	3485338-3485369	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1756038-1756069	8	0.75
LR134140_2	2.46\|3485338\|32\|LR134140\|CRISPRCasFinder,CRT	3485338-3485369	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1879010-1879041	8	0.75
LR134140_2	2.47\|3485399\|31\|LR134140\|CRISPRCasFinder,CRT	3485399-3485429	31	MN693027	Marine virus AFVG_117M71, complete genome	19832-19862	8	0.742
LR134140_2	2.47\|3485399\|31\|LR134140\|CRISPRCasFinder,CRT	3485399-3485429	31	MN693700	Marine virus AFVG_250M620, complete genome	19831-19861	8	0.742
LR134140_1	1.33\|3475718\|32\|LR134140\|CRISPRCasFinder,CRT	3475718-3475749	32	MN693011	Marine virus AFVG_117M58, complete genome	34901-34932	9	0.719
LR134140_1	1.36\|3475901\|32\|LR134140\|CRISPRCasFinder,CRT	3475901-3475932	32	MK250029	Prevotella phage Lak-C1, complete genome	220147-220178	9	0.719
LR134140_1	1.36\|3475901\|32\|LR134140\|CRISPRCasFinder,CRT	3475901-3475932	32	MK250016	Prevotella phage Lak-A1, complete genome	256365-256396	9	0.719
LR134140_1	1.36\|3475901\|32\|LR134140\|CRISPRCasFinder,CRT	3475901-3475932	32	MK250019	Prevotella phage Lak-A2, complete genome	177499-177530	9	0.719
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72061	9	0.71
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3414-3444	9	0.71
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232723-232753	9	0.71
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129920	9	0.71
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109942-109972	9	0.71
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148698-148728	9	0.71
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3414-3444	9	0.71
LR134140_2	2.25\|3485595\|35\|LR134140\|PILER-CR	3485595-3485629	35	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	144844-144878	9	0.743
LR134140_2	2.26\|3484118\|32\|LR134140\|CRISPRCasFinder,CRT	3484118-3484149	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	616323-616354	9	0.719
LR134140_2	2.26\|3484118\|32\|LR134140\|CRISPRCasFinder,CRT	3484118-3484149	32	NC_024369	Vibrio phage X29, complete genome	16391-16422	9	0.719
LR134140_2	2.26\|3484118\|32\|LR134140\|CRISPRCasFinder,CRT	3484118-3484149	32	MK575466	Vibrio phage Rostov 7, complete genome	37606-37637	9	0.719
LR134140_2	2.26\|3484118\|32\|LR134140\|CRISPRCasFinder,CRT	3484118-3484149	32	KJ545483	Vibrio phage phi 2, complete genome	16391-16422	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693555	Marine virus AFVG_25M96, complete genome	8842-8873	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693550	Marine virus AFVG_25M93, complete genome	10730-10761	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693245	Marine virus AFVG_25M69, complete genome	11115-11146	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693208	Marine virus AFVG_25M383, complete genome	25882-25913	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693436	Marine virus AFVG_25M57, complete genome	28024-28055	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693515	Marine virus AFVG_25M70, complete genome	10467-10498	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693320	Marine virus AFVG_25M58, complete genome	28018-28049	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693286	Marine virus AFVG_25M92, complete genome	9636-9667	9	0.719
LR134140_2	2.30\|3484362\|32\|LR134140\|CRISPRCasFinder,CRT	3484362-3484393	32	MN693549	Marine virus AFVG_25M89, complete genome	11533-11564	9	0.719
LR134140_2	2.38\|3484850\|32\|LR134140\|CRISPRCasFinder,CRT	3484850-3484881	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	213856-213887	9	0.719
LR134140_2	2.44\|3485215\|32\|LR134140\|CRISPRCasFinder,CRT	3485215-3485246	32	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	90958-90989	9	0.719
LR134140_2	2.50\|3485581\|32\|LR134140\|CRISPRCasFinder,CRT	3485581-3485612	32	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	144847-144878	9	0.719
LR134140_3	3.4\|3485934\|32\|LR134140\|PILER-CR	3485934-3485965	32	NZ_CP015221	Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence	111308-111339	9	0.719
LR134140_3	3.5\|3485745\|32\|LR134140\|CRISPRCasFinder,CRT	3485745-3485776	32	MK765565	Tortoise microvirus 15 isolate 15_SP_71, complete genome	3157-3188	9	0.719
LR134140_3	3.5\|3485745\|32\|LR134140\|CRISPRCasFinder,CRT	3485745-3485776	32	MK765613	Tortoise microvirus 61 isolate 61_SP_107, complete genome	3172-3203	9	0.719
LR134140_3	3.8\|3485928\|32\|LR134140\|CRISPRCasFinder,CRT	3485928-3485959	32	NZ_CP015221	Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence	111308-111339	9	0.719
LR134140_1	1.25\|3475229\|32\|LR134140\|CRISPRCasFinder,CRT	3475229-3475260	32	MG945729	UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome	1763-1794	10	0.688
LR134140_1	1.32\|3475657\|32\|LR134140\|CRISPRCasFinder,CRT	3475657-3475688	32	MK449008	Streptococcus phage Javan84, complete genome	18935-18966	10	0.688
LR134140_1	1.32\|3475657\|32\|LR134140\|CRISPRCasFinder,CRT	3475657-3475688	32	MK448832	Streptococcus phage Javan85, complete genome	18935-18966	10	0.688
LR134140_1	1.37\|3475962\|32\|LR134140\|CRISPRCasFinder,CRT	3475962-3475993	32	NZ_CP024657	Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence	129540-129571	10	0.688
LR134140_1	1.37\|3475962\|32\|LR134140\|CRISPRCasFinder,CRT	3475962-3475993	32	NZ_CP015354	Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence	111984-112015	10	0.688
LR134140_1	1.37\|3475962\|32\|LR134140\|CRISPRCasFinder,CRT	3475962-3475993	32	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	46996-47027	10	0.688
LR134140_1	1.37\|3475962\|32\|LR134140\|CRISPRCasFinder,CRT	3475962-3475993	32	MH078572	Staphylococcus phage phiSA_BS1, complete genome	1850-1881	10	0.688
LR134140_1	1.38\|3476023\|31\|LR134140\|CRISPRCasFinder,CRT	3476023-3476053	31	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78356-78386	10	0.677
LR134140_2	2.29\|3484301\|32\|LR134140\|CRISPRCasFinder,CRT	3484301-3484332	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1888410-1888441	10	0.688
LR134140_2	2.29\|3484301\|32\|LR134140\|CRISPRCasFinder,CRT	3484301-3484332	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1888408-1888439	10	0.688
LR134140_2	2.37\|3484789\|32\|LR134140\|CRISPRCasFinder,CRT	3484789-3484820	32	MK047641	Phage NV21, complete genome	23610-23641	10	0.688
LR134140_2	2.39\|3484911\|32\|LR134140\|CRISPRCasFinder,CRT	3484911-3484942	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	191710-191741	10	0.688
LR134140_2	2.39\|3484911\|32\|LR134140\|CRISPRCasFinder,CRT	3484911-3484942	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	237223-237254	10	0.688
LR134140_2	2.46\|3485338\|32\|LR134140\|CRISPRCasFinder,CRT	3485338-3485369	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	91874-91905	10	0.688
LR134140_1	1.28\|3475413\|32\|LR134140\|CRISPRCasFinder,CRT	3475413-3475444	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	4151-4182	11	0.656
LR134140_1	1.28\|3475413\|32\|LR134140\|CRISPRCasFinder,CRT	3475413-3475444	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	777802-777833	11	0.656

1. spacer 3.4|3485934|32|LR134140|PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

2. spacer 3.4|3485934|32|LR134140|PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

3. spacer 3.4|3485934|32|LR134140|PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

4. spacer 3.8|3485928|32|LR134140|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

5. spacer 3.8|3485928|32|LR134140|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

6. spacer 3.8|3485928|32|LR134140|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

7. spacer 1.40|3476083|31|LR134140|CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.871

gggatcgcgctggcggtcgcatccgttgccg-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgc	Protospacer
*.**************.* ****** *****

8. spacer 1.40|3476083|31|LR134140|CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 4, identity: 0.871

gggatcgcgctggcggtcgcatccgttgccg-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgc	Protospacer
*.**************.* ****** *****

9. spacer 1.40|3476083|31|LR134140|CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.871

gggatcgcgctggcggtcgcatccgttgccg-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgc	Protospacer
*.**************.* ****** *****

10. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

11. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

12. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

13. spacer 1.40|3476083|31|LR134140|CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 5, identity: 0.839

gggatcgcgctggcggtcgcatccgttgccg-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgc	Protospacer
 .**************.* ****** *****

14. spacer 2.11|3484725|35|LR134140|PILER-CR matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 5, identity: 0.857

-ccgcctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gccgtc-ggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ***.* ***********.******** *******

15. spacer 2.36|3484728|32|LR134140|CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
** ***********.***********..* **

16. spacer 2.50|3485581|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.844

--ccggacgacccgatggggatcctgccgttgct	CRISPR spacer
tcccggccg--ccgatggcgatcctgccggtgct	Protospacer
  **** **  ******* ********** ****

17. spacer 2.50|3485581|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.844

--ccggacgacccgatggggatcctgccgttgct	CRISPR spacer
tcccggccg--ccgatggcgatcctgccggtgct	Protospacer
  **** **  ******* ********** ****

18. spacer 1.36|3475901|32|LR134140|CRISPRCasFinder,CRT matches to MK448383 (Streptococcus satellite phage Javan248, complete genome) position: , mismatch: 6, identity: 0.812

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
tgaaaatcttctttcatagaaacgtatgtatt	Protospacer
*.**************** ** **** * .**

19. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.806

agcacaatcattattagatgaactt--tcatca	CRISPR spacer
aacacaagaattattagatgaacttggtgat--	Protospacer
*.*****  ****************  * **

20. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

21. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 6, identity: 0.812

ggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
ataataaaaaagtatttgagtcaactgatata-	Protospacer
. ******** * *************  ****

22. spacer 2.36|3484728|32|LR134140|CRISPRCasFinder,CRT matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.812

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ..***********.******** *******

23. spacer 1.21|3474985|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP024891 (Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence) position: , mismatch: 7, identity: 0.781

cagtgcggcagcgcgcaatcgagacacgccat	CRISPR spacer
cggtgcgacagcgagcaatcgagacgggctct	Protospacer
*.*****.***** ***********. **. *

24. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

25. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

26. spacer 1.40|3476083|31|LR134140|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.774

gggatcgcgctggcggtcgcatccgttgccg	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggccc	Protospacer
 ** ******* ************ . ***

27. spacer 1.40|3476083|31|LR134140|CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.774

gggatcgcgctggcggtcgcatccgttgccg-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagt	Protospacer
********* ********** *.**  *  *

28. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
tgtataaaaatgaatttgaggtaactccctac	Protospacer
 * ***************** .*****. **

29. spacer 2.34|3484606|32|LR134140|CRISPRCasFinder,CRT matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 7, identity: 0.781

aaacccgcgcccgtgagctcgatatgctcggc	CRISPR spacer
ccatccgcgcccgtgagcacgatgtgctggac	Protospacer
  *.************** ****.**** *.*

30. spacer 2.46|3485338|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gcgatgtatgccgcgacgattgaatccacgct	Protospacer
********************.**.  *. .**

31. spacer 2.46|3485338|32|LR134140|CRISPRCasFinder,CRT matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
accattcatgccgcgacgaacaagagcgaaca	Protospacer
.* ** .************ *.*********

32. spacer 1.27|3475352|32|LR134140|CRISPRCasFinder,CRT matches to KR053200 (Gordonia phage GTE6, complete genome) position: , mismatch: 8, identity: 0.75

tgaagaacggccagcccgtcgaggtatcaatc	CRISPR spacer
tgaagatcgaccagcccgtcgagccggtgatc	Protospacer
****** **.************* .. ..***

33. spacer 1.31|3475596|32|LR134140|CRISPRCasFinder,CRT matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 8, identity: 0.75

caataggacagccattcgagcgcccagagttt	CRISPR spacer
tcacaggacagctattcgagcgcccagtccgt	Protospacer
. *.********.**************  . *

34. spacer 1.39|3476083|32|LR134140|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

35. spacer 1.40|3476083|31|LR134140|CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 8, identity: 0.742

gggatcgcgctggcggtcgcatccgttgccg	CRISPR spacer
cggctcgcgctggcggtcgcttcctcggcgc	Protospacer
 ** **************** *** . **

36. spacer 2.11|3484725|35|LR134140|PILER-CR matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 8, identity: 0.771

ccgcctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ataccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
 ..** ***********.***********..* **

37. spacer 2.21|3485346|35|LR134140|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.771

ccggcgatg-----tatgccgcgacgatcgagagcgaact	CRISPR spacer
-----gatgaaccttatgccacgacgatcgagaacgaaca	Protospacer
     ****     ******.************.*****

38. spacer 2.21|3485346|35|LR134140|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.771

ccggcgatg-----tatgccgcgacgatcgagagcgaact	CRISPR spacer
-----gatgaaccttatgccacgacgatcgagaacgaaca	Protospacer
     ****     ******.************.*****

39. spacer 2.34|3484606|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 8, identity: 0.75

aaacccgcgcccgtgagctcgatatgctcggc	CRISPR spacer
aaaccagcgcccgcgagctcgatcctttcctc	Protospacer
***** *******.********* . .**  *

40. spacer 2.46|3485338|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

41. spacer 2.46|3485338|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

42. spacer 2.47|3485399|31|LR134140|CRISPRCasFinder,CRT matches to MN693027 (Marine virus AFVG_117M71, complete genome) position: , mismatch: 8, identity: 0.742

cagcagatgaaaaatatttacagattggtaa	CRISPR spacer
cagcagatgaaaaagatttacaagaagcgca	Protospacer
************** *******..  *   *

43. spacer 2.47|3485399|31|LR134140|CRISPRCasFinder,CRT matches to MN693700 (Marine virus AFVG_250M620, complete genome) position: , mismatch: 8, identity: 0.742

cagcagatgaaaaatatttacagattggtaa	CRISPR spacer
cagcagatgaaaaagatttacaagaagcgca	Protospacer
************** *******..  *   *

44. spacer 1.33|3475718|32|LR134140|CRISPRCasFinder,CRT matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 9, identity: 0.719

aactaacgtctatagctaaatgtagagaaaac	CRISPR spacer
taaaaggttctatagctaaaagtggagaaaat	Protospacer
 *  *.  ************ **.*******.

45. spacer 1.36|3475901|32|LR134140|CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

46. spacer 1.36|3475901|32|LR134140|CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

47. spacer 1.36|3475901|32|LR134140|CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

48. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

49. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

50. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

51. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

52. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

53. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

54. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

55. spacer 2.25|3485595|35|LR134140|PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

ccgccggacgacccgatggggatcctgccgttgct	CRISPR spacer
ccgccggacgccccggtggggatcctcgggatcgg	Protospacer
********** ****.**********   * *

56. spacer 2.26|3484118|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
ccattggtcggattgtttgcgtgcggggccgg	Protospacer
. . .* .****************** * ***

57. spacer 2.26|3484118|32|LR134140|CRISPRCasFinder,CRT matches to NC_024369 (Vibrio phage X29, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

58. spacer 2.26|3484118|32|LR134140|CRISPRCasFinder,CRT matches to MK575466 (Vibrio phage Rostov 7, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

59. spacer 2.26|3484118|32|LR134140|CRISPRCasFinder,CRT matches to KJ545483 (Vibrio phage phi 2, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

60. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

61. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

62. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

63. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

64. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

65. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

66. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

67. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

68. spacer 2.30|3484362|32|LR134140|CRISPRCasFinder,CRT matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

69. spacer 2.38|3484850|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcggcctgttttttgattttgacaatcag	CRISPR spacer
ccgtcggcctgttctttcattttgacttacac	Protospacer
   **********.*** ********   **

70. spacer 2.44|3485215|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaataaccgaaatatccacggtggaaatttc	CRISPR spacer
ctttttacaggaatatccacggtggaaatagt	Protospacer
*.  * ** *.******************  .

71. spacer 2.50|3485581|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ccggacgacccgatggggatcctgccgttgct	CRISPR spacer
ccggacgccccggtggggatcctcgggatcgg	Protospacer
******* ****.**********   * *

72. spacer 3.4|3485934|32|LR134140|PILER-CR matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.*********

73. spacer 3.5|3485745|32|LR134140|CRISPRCasFinder,CRT matches to MK765565 (Tortoise microvirus 15 isolate 15_SP_71, complete genome) position: , mismatch: 9, identity: 0.719

gggggcttgttaatatttctctcactgactac	CRISPR spacer
cagaacgtgttaatatttcactcgctgacttt	Protospacer
 .*..* ************ ***.****** .

74. spacer 3.5|3485745|32|LR134140|CRISPRCasFinder,CRT matches to MK765613 (Tortoise microvirus 61 isolate 61_SP_107, complete genome) position: , mismatch: 9, identity: 0.719

gggggcttgttaatatttctctcactgactac	CRISPR spacer
cagaacgtgttaatatttcactcgctgacttt	Protospacer
 .*..* ************ ***.****** .

75. spacer 3.8|3485928|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.*********

76. spacer 1.25|3475229|32|LR134140|CRISPRCasFinder,CRT matches to MG945729 (UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome) position: , mismatch: 10, identity: 0.688

aaaataacaacattatcagtgtgaaaagtctc	CRISPR spacer
gcaataacaaccttatcagtgtcaactttaat	Protospacer
. ********* ********** **   *  .

77. spacer 1.32|3475657|32|LR134140|CRISPRCasFinder,CRT matches to MK449008 (Streptococcus phage Javan84, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

78. spacer 1.32|3475657|32|LR134140|CRISPRCasFinder,CRT matches to MK448832 (Streptococcus phage Javan85, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

79. spacer 1.37|3475962|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.

80. spacer 1.37|3475962|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP015354 (Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.

81. spacer 1.37|3475962|32|LR134140|CRISPRCasFinder,CRT matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

82. spacer 1.37|3475962|32|LR134140|CRISPRCasFinder,CRT matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

83. spacer 1.38|3476023|31|LR134140|CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.677

agcacaatcattattagatgaactttcatca	CRISPR spacer
tcttatggcattattagatgaattttcaaca	Protospacer
  .   . **************.***** **

84. spacer 2.29|3484301|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

85. spacer 2.29|3484301|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

86. spacer 2.37|3484789|32|LR134140|CRISPRCasFinder,CRT matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 10, identity: 0.688

ccgaatatggtgataatgttgcaccttcgctc	CRISPR spacer
ctacttatggtgataatgtttcaccgtcttgg	Protospacer
*..  *************** **** ** .

87. spacer 2.39|3484911|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

88. spacer 2.39|3484911|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

89. spacer 2.46|3485338|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tttgtccatgccgcgacgatcgataccgaaaa	Protospacer
 . .* .**************** * ****

90. spacer 1.28|3475413|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 11, identity: 0.656

cgttgtcgttgctggacagaactccggggacg	CRISPR spacer
tcaggtcgaggctggacagaactccggatctc	Protospacer
.   ****  *****************.  .

91. spacer 1.28|3475413|32|LR134140|CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 11, identity: 0.656

cgttgtcgttgctggacagaactccggggacg	CRISPR spacer
tcaggtcgaggctggacagaactccggatctc	Protospacer
.   ****  *****************.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

173506 : 184441

Escherichia_phage(75.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ94160.1\|173506_174721_-	starvation sensing protein RspA	Q6A202	Oenococcus_phage	5.3e-46	29.0
VDZ94161.1\|174842_175178_-	UPF0060 membrane protein CKO_01576	A0A218MNG8	uncultured_virus	1.3e-23	52.4
VDZ94162.1\|175320_175662_+	putative secreted protein	NA	NA	NA	NA
VDZ94163.1\|175697_176258_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
VDZ94164.1\|176298_176976_-	lipoprotein	NA	NA	NA	NA
VDZ94165.1\|177115_177217_+	Uncharacterised protein	NA	NA	NA	NA
VDZ94166.1\|177173_177422_+	outer membrane protein	NA	NA	NA	NA
VDZ94167.1\|177578_179399_+	dimethyl sulfoxide reductase, subunit A1	A0A077SK27	Escherichia_phage	9.7e-161	49.8
VDZ94168.1\|179385_180018_+	dimethyl sulfoxide reductase, subunit A1	A0A077SK27	Escherichia_phage	3.7e-51	50.2
VDZ94169.1\|180175_181099_+	dimethyl sulfoxide reductase subunit	A0A077SK27	Escherichia_phage	4.0e-54	43.9
VDZ94170.1\|181338_181551_+	dimethyl sulfoxide reductase subunit	NA	NA	NA	NA
VDZ94171.1\|181615_182557_+	dimethyl sulfoxide reductase subunit	A0A077SK27	Escherichia_phage	1.1e-70	45.7
VDZ94172.1\|182567_183185_+	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	60.1
VDZ94173.1\|183186_184044_+	dimethyl sulfoxide reductase subunit H	NA	NA	NA	NA
VDZ94174.1\|184087_184441_+	Anaerobic dimethyl sulfoxide reductasechaperone DmsD	A0A077SLS7	Escherichia_phage	7.2e-12	38.8

DBSCAN-SWA_2

589818 : 667372

109

Salmonella_phage(47.06%)

tRNA,holin,head,terminase,protease,capsid,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ94726.1\|589818_590148_+\|tRNA	tRNA 2-thiouridine synthesizing protein E	NA	NA	NA	NA
VDZ94727.1\|590144_590426_-	acylphosphatase	NA	NA	NA	NA
VDZ94728.1\|590474_590840_-	Bacterial regulatory protein, AraC	NA	NA	NA	NA
VDZ94729.1\|590811_591264_-	transcriptional regulator	NA	NA	NA	NA
VDZ94730.1\|591280_591784_-	kinase inhibitor	NA	NA	NA	NA
VDZ94731.1\|592044_592491_+	LSU m5C1962 methyl transferase RlmI	NA	NA	NA	NA
VDZ94732.1\|592564_593257_+	LSU m5C1962 methyl transferase RlmI	NA	NA	NA	NA
VDZ94733.1\|593314_593632_+	hemimethylated DNA binding protein YccV	NA	NA	NA	NA
VDZ94734.1\|593676_594090_-	Succinyl-CoA synthetase alpha subunit-related enzyme	NA	NA	NA	NA
VDZ94735.1\|594263_594995_+	UPF0319 protein YccT precursor	NA	NA	NA	NA
VDZ94736.1\|595019_595478_+	methylglyoxal synthase	NA	NA	NA	NA
VDZ94737.1\|595513_596560_-	helicase IV	A7KV33	Bacillus_phage	2.0e-09	25.5
VDZ94738.1\|596546_597029_-	helicase IV	NA	NA	NA	NA
VDZ94739.1\|597048_597570_-	helicase IV	NA	NA	NA	NA
VDZ94740.1\|597694_597856_+	Inner membrane protein YccF	NA	NA	NA	NA
VDZ94741.1\|598498_598771_+	Putative efflux (PET) family inner membrane protein YccS	NA	NA	NA	NA
VDZ94742.1\|598909_600322_+	Putative efflux (PET) family inner membrane protein YccS	NA	NA	NA	NA
VDZ94743.1\|600308_600542_-	DNA transformation protein	NA	NA	NA	NA
VDZ94744.1\|600510_600915_-	DNA transformation protein TfoX	NA	NA	NA	NA
VDZ94745.1\|601131_601641_+	cell division inhibitor	NA	NA	NA	NA
VDZ94746.1\|601997_603050_+	outer membrane protein A	NA	NA	NA	NA
VDZ94747.1\|603121_603574_-	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA
VDZ94748.1\|603759_604650_+\|protease	protease	NA	NA	NA	NA
VDZ94749.1\|604705_605521_+\|protease	protease	NA	NA	NA	NA
VDZ94750.1\|605589_606108_+	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	NA	NA	NA	NA
VDZ94751.1\|606630_607194_-	lipoprotein	NA	NA	NA	NA
VDZ94752.1\|607190_608831_-	paraquat-inducible protein B	NA	NA	NA	NA
VDZ94753.1\|608835_610089_-	paraquat-inducible protein A	NA	NA	NA	NA
VDZ94754.1\|610103_612011_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
VDZ94755.1\|612023_614132_-	23S rRNA (guanine-N-2-) -methyl transferase rlmL	NA	NA	NA	NA
VDZ94756.1\|614231_614552_+	Flavodoxin reductases (ferredoxin-NADPHreductases) family 1	NA	NA	NA	NA
VDZ94757.1\|614490_615342_+	Flavodoxin reductases (ferredoxin-NADPHreductases) family 1	NA	NA	NA	NA
VDZ94758.1\|615338_615881_-	Z-ring-associated protein C	NA	NA	NA	NA
VDZ94759.1\|616046_617057_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
VDZ94760.1\|617264_619877_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.8e-20	22.8
VDZ94761.1\|620303_620495_+	Gifsy-2 prophage MsgA	S4TNM0	Salmonella_phage	6.2e-26	95.2
VDZ94762.1\|620765_621452_+	gifsy-2 prophage protein	NA	NA	NA	NA
VDZ94763.1\|621494_621743_+	hypothetical phage protein (pseudogene)	NA	NA	NA	NA
VDZ94764.1\|621811_622438_+	Uncharacterised ACR, COG2135	A0A2H4J5W2	uncultured_Caudovirales_phage	2.4e-66	64.8
VDZ94765.1\|622569_622842_-\|transposase	transposase (remnant)	A0A0P0ZBS5	Stx2-converting_phage	3.4e-09	62.8
VDZ94766.1\|622952_623579_-	Fis family transcriptional regulator	Q9MBL9	Phage_Gifsy-2	2.1e-110	99.0
VDZ94767.1\|623538_623880_-	Fis family transcriptional regulator	Q9MBL9	Phage_Gifsy-2	2.1e-61	97.3
VDZ94768.1\|623974_624358_+\|tail	phage tail-fiber asembly protein	A0A1B0VCD0	Salmonella_phage	5.1e-19	63.4
VDZ94769.1\|624500_624731_-	Uncharacterised protein	NA	NA	NA	NA
VDZ94770.1\|625002_625521_-\|tail	bacteriophage tail protein	A0A0U2QV64	Escherichia_phage	2.5e-45	51.4
VDZ94771.1\|628267_628510_-	Uncharacterised protein	NA	NA	NA	NA
VDZ94772.1\|628548_631155_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	8.7e-288	67.8
VDZ94773.1\|632222_632693_-\|tail	tail assembly protein	C6ZCZ4	Enterobacteria_phage	2.6e-33	67.0
VDZ94774.1\|632804_633320_-\|tail	phage tail protein	Q687F0	Enterobacteria_phage	3.0e-59	73.5
VDZ94775.1\|633339_634035_-\|tail	tail protein	A0A0K2FJ01	Enterobacteria_phage	1.0e-89	66.7
VDZ94776.1\|634124_634658_+	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-46	54.0
VDZ94777.1\|634774_635272_-	attachment/invasion protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
VDZ94778.1\|635370_635703_-\|tail	tail protein	A5LH39	Enterobacteria_phage	4.4e-35	61.5
VDZ94779.1\|635699_636311_-	gifsy-1 prophage VmtH	A5LH38	Enterobacteria_phage	1.7e-53	58.0
VDZ94780.1\|636298_636850_-	gifsy-1 prophage VmtH	A5LH38	Enterobacteria_phage	6.5e-44	59.0
VDZ94781.1\|636833_637322_-	gifsy-1 prophage VmtH	A5LH38	Enterobacteria_phage	2.5e-15	79.2
VDZ94782.1\|637318_638794_-	gifsy-1 prophage VmtH	E4WL33	Enterobacteria_phage	2.6e-132	54.4
VDZ94783.1\|638777_639038_-\|tail	minor tail-like protein	A5LH37	Enterobacteria_phage	1.7e-18	55.3
VDZ94784.1\|639100_639319_-\|tail	minor tail protein	A5LH36	Enterobacteria_phage	2.0e-12	56.9
VDZ94785.1\|639308_639491_-\|tail	minor tail protein	A5LH36	Enterobacteria_phage	5.5e-08	61.5
VDZ94786.1\|639539_640292_-\|tail	major tail protein	A5LH35	Enterobacteria_phage	1.9e-94	70.0
VDZ94787.1\|640304_640706_-\|tail	phage minor tail protein U	A0A291AWY2	Escherichia_phage	8.1e-44	59.8
VDZ94788.1\|640705_641305_-\|tail	prophage minor tail protein Z	A0A291AWZ0	Escherichia_phage	8.3e-69	68.7
VDZ94789.1\|641314_641671_-\|tail	tail attachment protein	K7P6U9	Enterobacteria_phage	1.8e-31	58.5
VDZ94790.1\|641681_642056_-	DNA packaging protein	A0A2R9YJP4	Escherichia_phage	4.8e-06	34.9
VDZ94791.1\|642119_643148_-\|capsid	phage major capsid protein E	A0A2I6TCE5	Escherichia_phage	2.4e-108	58.4
VDZ94792.1\|643202_643550_-	Head decoration protein	A0A2R9YJN3	Escherichia_phage	4.6e-19	52.7
VDZ94793.1\|643549_645064_-\|head,tail	Gifsy-1 prophage head-tail preconnector gp5	A0A0K2FI53	Enterobacteria_phage	2.1e-100	51.8
VDZ94794.1\|645053_646640_-\|head,tail	Gifsy-1 prophage head-tail preconnector gp4	K7P6U7	Enterobacteria_phage	3.2e-184	60.5
VDZ94795.1\|646636_646840_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.0e-18	80.0
VDZ94796.1\|646823_647408_-\|terminase	phage terminase large subunit	A0A2I6TC92	Escherichia_phage	2.5e-49	60.6
VDZ94797.1\|647349_647583_-\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	8.9e-27	69.7
VDZ94798.1\|647632_648760_-\|terminase	phage terminase large subunit	E4WL19	Enterobacteria_phage	1.7e-160	71.0
VDZ94799.1\|648731_649277_-\|terminase	terminase	K7P7G0	Enterobacteria_phage	4.5e-53	61.3
VDZ94800.1\|649745_650213_-	putative endopeptidase	A0A0M4RD57	Salmonella_phage	7.7e-70	90.2
VDZ94801.1\|650209_650509_-	Lysozyme	A0A0M4R365	Salmonella_phage	9.9e-47	98.0
VDZ94802.1\|650531_650663_-	Lysozyme	A0A0M4R365	Salmonella_phage	7.2e-10	100.0
VDZ94803.1\|650646_650982_-\|holin	bacteriophage holin	A0A0M3ULK9	Salmonella_phage	4.1e-57	100.0
VDZ94804.1\|651464_651938_+	GogA	Q9MBM0	Phage_Gifsy-2	9.1e-87	100.0
VDZ94805.1\|651944_652082_-\|holin	holin	NA	NA	NA	NA
VDZ94806.1\|652299_652665_+	Gifsy-2 prophage protein	NA	NA	NA	NA
VDZ94807.1\|652886_653012_-	Gifsy-2 prophage protein	NA	NA	NA	NA
VDZ94808.1\|653185_653404_-	Gifsy-2 prophage protein	NA	NA	NA	NA
VDZ94809.1\|653570_654368_-	molecular chaperone	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
VDZ94810.1\|654357_654504_-	prophage protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
VDZ94811.1\|654500_655112_-	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	4.2e-92	99.5
VDZ94812.1\|655114_655321_-	Phage protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
VDZ94813.1\|655320_655923_-	bacteriophage protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
VDZ94814.1\|656338_656572_-	Gifsy-1 prophage DinI	H6WRY5	Salmonella_phage	2.1e-36	98.7
VDZ94815.1\|656863_657133_-	putative prophage protein	NA	NA	NA	NA
VDZ94816.1\|657231_657543_-	prophage protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
VDZ94817.1\|657539_657887_-	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
VDZ94818.1\|657897_658647_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
VDZ94819.1\|658649_659549_-	regulatory protein	H6WRX7	Salmonella_phage	4.5e-159	100.0
VDZ94820.1\|659526_659628_-	prophage protein replication Protein O	S4TNJ9	Salmonella_phage	2.1e-09	96.4
VDZ94821.1\|659718_659925_-	CI-like protein	H6WRX6	Salmonella_phage	4.0e-31	100.0
VDZ94822.1\|660058_660298_-	phage regulatory protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
VDZ94823.1\|660418_660829_+	regulatory protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
VDZ94824.1\|661133_661292_+	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
VDZ94825.1\|661376_661664_+	Gifsy-1 prophage protein	H6WRX2	Salmonella_phage	8.6e-48	98.9
VDZ94826.1\|661794_662283_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	7.8e-73	100.0
VDZ94827.1\|662242_662602_+	Exodeoxyribonuclease VIII	H6WRX1	Salmonella_phage	7.0e-55	96.3
VDZ94828.1\|662690_663239_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	6.6e-97	98.4
VDZ94829.1\|663216_663462_+	exodeoxyribonuclease VIII	H6WRX1	Salmonella_phage	2.0e-13	97.4
VDZ94830.1\|663514_664555_+	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	8.6e-138	93.4
VDZ94831.1\|664583_664727_+	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	3.8e-20	100.0
VDZ94832.1\|664737_665847_+	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	7.1e-207	100.0
VDZ94833.1\|666465_666957_+	Integrase	S4TSP2	Salmonella_phage	2.0e-84	98.1
VDZ94834.1\|667108_667372_+	Integrase	S4TSP2	Salmonella_phage	4.7e-32	100.0

DBSCAN-SWA_3

717667 : 727528

Escherichia_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ94897.1\|717667_718285_-	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	59.6
VDZ94898.1\|718295_719942_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	9.7e-160	51.3
VDZ94899.1\|720043_720742_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.3e-46	50.2
VDZ94900.1\|720979_721840_-\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.0e-83	54.6
VDZ94901.1\|721805_722273_-\|tRNA	seryl-tRNA synthetase	NA	NA	NA	NA
VDZ94902.1\|722531_723875_-	Holliday junction DNA helicase	G3MBE0	Bacillus_virus	1.6e-80	40.9
VDZ94903.1\|723884_724496_-	outer-membrane lipoprotein carrier protein	NA	NA	NA	NA
VDZ94904.1\|724638_725019_-	DNA translocase ftsK	J7I0T4	Pseudomonas_phage	1.6e-12	48.8
VDZ94905.1\|724957_727528_-	cell division protein FtsK	S5VNE3	Mycobacterium_phage	5.7e-82	51.3

DBSCAN-SWA_4

739971 : 746250

Planktothrix_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ94918.1\|739971_742248_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
VDZ94919.1\|742278_742599_-\|protease	ATP-dependent clp protease adaptor protein	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
VDZ94920.1\|742922_743144_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
VDZ94921.1\|743273_744929_-	ABC transporter	G9BWD6	Planktothrix_phage	1.9e-22	47.6
VDZ94922.1\|744916_745219_-	ABC transporter	G9BWD6	Planktothrix_phage	2.3e-06	38.2
VDZ94923.1\|745215_746250_-	Macrolide-specific efflux protein MacA	A0A140XAI1	Dickeya_phage	1.3e-08	38.9

DBSCAN-SWA_5

1147703 : 1184644

uncultured_virus(28.57%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ95446.1\|1147703_1148798_+\|tRNA	tRNA 2-selenouridine synthase	NA	NA	NA	NA
VDZ95447.1\|1148836_1149496_-	methionine ABC transporter permease	NA	NA	NA	NA
VDZ95448.1\|1149488_1149668_-	Methionine import ATP-binding protein MetN 2	NA	NA	NA	NA
VDZ95449.1\|1149618_1150059_-	Methionine import ATP-binding protein MetN 2	NA	NA	NA	NA
VDZ95450.1\|1150187_1150508_-	Methionine import ATP-binding protein MetN 2	NA	NA	NA	NA
VDZ95451.1\|1150544_1150763_-	methionine ABC transporter ATPase	NA	NA	NA	NA
VDZ95452.1\|1150999_1151251_-	methionine ABC transporter ATPase	NA	NA	NA	NA
VDZ95453.1\|1151638_1152601_-	membrane protein	NA	NA	NA	NA
VDZ95454.1\|1152597_1152771_-	membrane protein	NA	NA	NA	NA
VDZ95455.1\|1152855_1152960_-	Uncharacterised protein	NA	NA	NA	NA
VDZ95456.1\|1152956_1154792_-	sugar ABC transporter permease	NA	NA	NA	NA
VDZ95457.1\|1154778_1155141_-	sugar ABC transporter permease	NA	NA	NA	NA
VDZ95458.1\|1155166_1155373_-	sugar ABC transporter permease	NA	NA	NA	NA
VDZ95459.1\|1155634_1156057_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
VDZ95460.1\|1156323_1156644_+	acyl-CoA thioesterase I	NA	NA	NA	NA
VDZ95461.1\|1156798_1157569_+	Putative NAD(P)-dependent oxidoreductase EC-YbbO	NA	NA	NA	NA
VDZ95462.1\|1157628_1158483_+	Thioredoxin domain-containing protein EC-YbbN	NA	NA	NA	NA
VDZ95463.1\|1158569_1158752_-	YbbM seven transmembrane helix protein	NA	NA	NA	NA
VDZ95464.1\|1159125_1159353_-	YbbM seven transmembrane helix protein	NA	NA	NA	NA
VDZ95465.1\|1159339_1160017_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.1e-22	32.5
VDZ95466.1\|1160163_1160397_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
VDZ95467.1\|1160380_1160668_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
VDZ95468.1\|1160676_1160916_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
VDZ95469.1\|1160924_1161080_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
VDZ95470.1\|1161076_1161529_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
VDZ95471.1\|1161529_1161871_-	copper efflux regulator	NA	NA	NA	NA
VDZ95472.1\|1162057_1163836_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	1.6e-70	36.1
VDZ95473.1\|1163774_1164560_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	3.0e-34	40.2
VDZ95474.1\|1164713_1165541_+	Secreted protein	NA	NA	NA	NA
VDZ95475.1\|1166622_1167102_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
VDZ95476.1\|1167218_1168871_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
VDZ95477.1\|1169043_1170264_+	fosmidomycin resistance protein	NA	NA	NA	NA
VDZ95478.1\|1170275_1170401_-	Uncharacterised protein	NA	NA	NA	NA
VDZ95479.1\|1170478_1170940_+	transport protein	NA	NA	NA	NA
VDZ95480.1\|1170957_1172154_+	transport protein	NA	NA	NA	NA
VDZ95481.1\|1172276_1173434_-	inosine/guanosine kinase	NA	NA	NA	NA
VDZ95482.1\|1173732_1174704_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	6.6e-15	27.4
VDZ95483.1\|1174700_1174907_-	ferrochelatase	NA	NA	NA	NA
VDZ95484.1\|1174933_1175257_-	ferrochelatase	NA	NA	NA	NA
VDZ95485.1\|1175360_1175660_-	ferrochelatase	NA	NA	NA	NA
VDZ95486.1\|1175888_1176533_-	adenylate kinase	NA	NA	NA	NA
VDZ95487.1\|1176773_1178648_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.7e-115	36.9
VDZ95488.1\|1178758_1179364_-	recombination protein RecR	NA	NA	NA	NA
VDZ95489.1\|1179363_1179693_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
VDZ95490.1\|1181780_1182332_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.0e-28	45.2
VDZ95491.1\|1182484_1182862_-	Inner membrane protein YbaN	NA	NA	NA	NA
VDZ95492.1\|1182942_1183458_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
VDZ95493.1\|1183471_1183639_+	Putative inner membrane protein	NA	NA	NA	NA
VDZ95494.1\|1183708_1184644_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	5.7e-64	52.1

DBSCAN-SWA_6

1834595 : 1842862

Enterobacteria_phage(66.67%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ96271.1\|1834595_1836245_-	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	1.5e-261	82.3
VDZ96272.1\|1836259_1836580_-	putative prophage protein	NA	NA	NA	NA
VDZ96273.1\|1836576_1836804_-	bacteriophage protein	NA	NA	NA	NA
VDZ96274.1\|1836800_1836995_-	CI repressor	Q7M2A7	Enterobacteria_phage	1.2e-21	83.9
VDZ96275.1\|1837406_1837616_-	phage DNA binding protein	Q7M299	Enterobacteria_phage	2.4e-15	67.2
VDZ96276.1\|1838156_1839041_+\|capsid	putative phage capsid protein	NA	NA	NA	NA
VDZ96277.1\|1839159_1839726_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	7.9e-61	65.9
VDZ96278.1\|1839972_1840068_+	Uncharacterised protein	NA	NA	NA	NA
VDZ96279.1\|1840319_1841108_+	Uncharacterised protein	NA	NA	NA	NA
VDZ96280.1\|1841116_1841572_+	Uncharacterised protein	NA	NA	NA	NA
VDZ96281.1\|1841594_1842344_-	Integrase	B7SYF8	Stenotrophomonas_phage	7.1e-41	41.6
VDZ96282.1\|1842418_1842862_-	Integrase	E5AGD0	Erwinia_phage	2.7e-16	43.6

DBSCAN-SWA_7

1879449 : 1882704

Vibrio_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ96321.1\|1879449_1880016_+	Anaerobic ribonucleoside-triphosphate reductase	A0A2H4YEI7	Aeromonas_phage	2.5e-30	49.0
VDZ96322.1\|1879963_1880257_+	Anaerobic ribonucleoside-triphosphate reductase	A0A2H4YEI7	Aeromonas_phage	1.1e-29	69.8
VDZ96323.1\|1880210_1880390_+	Anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.1e-11	97.1
VDZ96324.1\|1880428_1880941_+	Anaerobic ribonucleoside-triphosphate reductase	Q76Z50	Aeromonas_virus	4.6e-60	64.7
VDZ96325.1\|1880897_1881107_+	Anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	2.0e-17	68.1
VDZ96326.1\|1881658_1882183_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A2D0YLR2	Vibrio_phage	6.6e-46	55.4
VDZ96327.1\|1882461_1882704_-	bifunctional antitoxin/transcriptional repressor RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	5.6e-16	51.2

DBSCAN-SWA_8

2006027 : 2010434

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ96479.1\|2006027_2006522_-	Twin-arginine leader-binding protein DmsD	A0A077SLS7	Escherichia_phage	9.6e-63	72.4
VDZ96480.1\|2006596_2007370_-	dimethyl sulfoxide reductase subunit C	A0A077SK59	Escherichia_phage	3.9e-103	79.5
VDZ96481.1\|2007362_2007989_-	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.9e-120	92.3
VDZ96482.1\|2008002_2008776_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.9e-124	80.9
VDZ96483.1\|2008780_2009065_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	8.0e-38	82.6
VDZ96484.1\|2009030_2010434_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.5e-217	81.2

DBSCAN-SWA_9

2097342 : 2136187

Burkholderia_phage(50.0%)

plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ96567.1\|2097342_2098341_-\|tRNA	tRNA dihydrouridine synthase A	NA	NA	NA	NA
VDZ96568.1\|2098490_2098784_-	conjugative transfer protein	NA	NA	NA	NA
VDZ96569.1\|2098843_2099137_-	conjugative transfer protein	NA	NA	NA	NA
VDZ96570.1\|2099174_2099738_-	conjugative transfer protein	NA	NA	NA	NA
VDZ96571.1\|2099984_2100500_+	zinc uptake regulation protein	NA	NA	NA	NA
VDZ96572.1\|2100941_2101448_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA
VDZ96573.1\|2101638_2102271_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA
VDZ96574.1\|2102449_2103058_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
VDZ96575.1\|2103166_2103535_-	diacylglycerol kinase	NA	NA	NA	NA
VDZ96576.1\|2103705_2106126_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
VDZ96577.1\|2106224_2107097_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
VDZ96578.1\|2107216_2107507_-	chorismate lyase	NA	NA	NA	NA
VDZ96579.1\|2108108_2108627_-	maltose operon periplasmic protein	NA	NA	NA	NA
VDZ96580.1\|2108878_2110237_-	maltoporin	NA	NA	NA	NA
VDZ96581.1\|2110325_2111435_-	maltose/maltodextrin transport ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
VDZ96582.1\|2111797_2111929_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VDZ96583.1\|2111979_2112210_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VDZ96584.1\|2112319_2112664_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VDZ96585.1\|2112839_2112992_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VDZ96586.1\|2113123_2113306_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96587.1\|2113256_2113487_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96588.1\|2113717_2114068_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96589.1\|2114024_2114165_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96590.1\|2114172_2114673_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96591.1\|2114687_2114834_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96592.1\|2114884_2115577_+	maltose transport inner membrane protein	NA	NA	NA	NA
VDZ96593.1\|2115742_2116153_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
VDZ96594.1\|2116295_2118368_-	lipoprotein	NA	NA	NA	NA
VDZ96595.1\|2118392_2119130_-	putative lipoprotein	NA	NA	NA	NA
VDZ96596.1\|2119126_2119765_-	outer membrane lipoprotein	NA	NA	NA	NA
VDZ96597.1\|2119828_2120074_-	YjbE secreted protein	NA	NA	NA	NA
VDZ96598.1\|2120514_2121633_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA
VDZ96599.1\|2121616_2122165_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA
VDZ96600.1\|2122509_2123856_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA
VDZ96601.1\|2123990_2124338_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
VDZ96602.1\|2124913_2125201_+	membrane protein	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
VDZ96603.1\|2125236_2125569_+	lytic murein transglycosylase	J9SH25	Pseudomonas_phage	4.8e-26	57.9
VDZ96604.1\|2125579_2125810_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	1.7e-22	67.1
VDZ96605.1\|2125822_2126137_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
VDZ96606.1\|2126296_2126752_+	putative cytoplasmic protein	NA	NA	NA	NA
VDZ96607.1\|2126748_2126946_+	gp12	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
VDZ96608.1\|2126935_2128363_+\|tail	tail protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
VDZ96609.1\|2128362_2128887_+\|tail	tail protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
VDZ96610.1\|2128938_2129256_+	Uncharacterised protein	NA	NA	NA	NA
VDZ96611.1\|2129440_2130718_+\|tail	tail protein	NA	NA	NA	NA
VDZ96612.1\|2130680_2132192_+	membrane protein	B9UDL6	Salmonella_phage	6.4e-49	29.9
VDZ96613.1\|2132172_2132295_-	Uncharacterised protein	NA	NA	NA	NA
VDZ96614.1\|2132355_2132715_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
VDZ96615.1\|2132705_2133821_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	6.9e-101	52.2
VDZ96616.1\|2133813_2134446_+\|tail	tail fiber protein	Q6QI98	Burkholderia_phage	1.1e-23	56.4
VDZ96617.1\|2134448_2135909_+	gp19	A0A0M3ULH6	Salmonella_phage	1.2e-76	38.8
VDZ96618.1\|2135911_2136187_+\|tail	Phage tail fiber	A0A0E3JQ06	Enterobacteria_phage	1.9e-15	43.8

DBSCAN-SWA_10

2285588 : 2316261

Salmonella_phage(53.33%)

holin,head,integrase,plate,capsid,lysis,tail,portal

attL 2285381:2285427|attR 2316377:2316423

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2285381:2285427	attL	NA	NA	NA	NA
VDZ96793.1\|2285588_2286062_+	Uncharacterised protein	S4TTB4	Salmonella_phage	2.2e-32	52.7
VDZ96794.1\|2286040_2286259_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	4.7e-38	100.0
VDZ96795.1\|2286336_2287506_-	phage late control gene D	S4TRX8	Salmonella_phage	1.4e-205	95.6
VDZ96796.1\|2287502_2287715_-	gp25	A0A0M4RCP0	Salmonella_phage	1.9e-28	94.2
VDZ96797.1\|2287737_2287989_-	gp25	S4TUC3	Salmonella_phage	4.3e-35	92.4
VDZ96798.1\|2288000_2290442_-	gp24	A0A0M3UL85	Salmonella_phage	0.0e+00	93.1
VDZ96799.1\|2290586_2290922_-\|tail	phage tail protein	A0A0M4S5P8	Salmonella_phage	1.8e-52	100.0
VDZ96800.1\|2290984_2291503_-\|tail	major tail sheath protein FII	S4TNZ0	Salmonella_phage	1.4e-93	99.4
VDZ96801.1\|2291518_2292706_-\|tail	bacteriophage major tail sheath protein FI	Q6K1H0	Salmonella_virus	2.0e-223	100.0
VDZ96802.1\|2293409_2294207_-	gp19	E5G6P0	Salmonella_phage	3.6e-120	95.1
VDZ96803.1\|2294277_2295153_-	gp19	A0A0M3ULF6	Salmonella_phage	1.3e-110	99.0
VDZ96804.1\|2295163_2295424_-\|tail	orf38; p2 I-like tail protein	A0A0M4R4W9	Salmonella_phage	1.2e-45	98.8
VDZ96805.1\|2295515_2295695_-\|tail	orf38; p2 I-like tail protein	A0A0M4R4W9	Salmonella_phage	4.9e-25	100.0
VDZ96806.1\|2295687_2296245_-\|plate	baseplate assembly protein	A0A1J0I2M3	Salmonella_phage	1.7e-95	99.5
VDZ96807.1\|2296301_2296598_-\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	8.6e-43	96.9
VDZ96808.1\|2296695_2296953_-\|plate	baseplate assembly protein	S4TRW8	Salmonella_phage	2.5e-30	97.1
VDZ96809.1\|2296949_2297591_-\|plate	baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.4e-98	85.0
VDZ96810.1\|2297667_2297985_-	Uncharacterised protein	NA	NA	NA	NA
VDZ96811.1\|2298266_2298617_-	Uncharacterised protein	NA	NA	NA	NA
VDZ96812.1\|2298760_2298907_-	Uncharacterised protein	NA	NA	NA	NA
VDZ96813.1\|2299129_2299525_-	phage virion morphogenesis protein	O80313	Escherichia_phage	5.9e-39	74.6
VDZ96814.1\|2299517_2299985_-\|tail	P2 phage tail completion protein R	U5N0S7	Enterobacteria_phage	2.2e-56	69.0
VDZ96815.1\|2300092_2300506_-\|lysis	phage lysis regulatory protein	O80310	Escherichia_phage	8.4e-36	59.9
VDZ96816.1\|2300502_2301012_-	glycoside hydrolase	A0A218M4K3	Erwinia_phage	4.6e-76	82.6
VDZ96817.1\|2300995_2301217_-\|holin	prophage Hp1 family holin	A0A218M4L5	Erwinia_phage	8.7e-24	71.2
VDZ96818.1\|2301207_2301411_-	phage Tail Protein X	U5N3E7	Enterobacteria_phage	8.9e-23	76.1
VDZ96819.1\|2301537_2301912_-\|head	phage head completion protein	A0A0F7LDJ1	Escherichia_phage	2.6e-36	61.9
VDZ96820.1\|2302009_2302768_-	gpM	Q94MJ2	Enterobacteria_phage	2.7e-80	67.1
VDZ96821.1\|2302771_2303932_-\|capsid	phage major capsid protein P2 family	A0A0M4R4W2	Salmonella_phage	2.8e-129	62.5
VDZ96822.1\|2303963_2304827_-\|capsid	phage capsid scaffolding protein GpO	A0A218M4L9	Erwinia_phage	4.5e-100	64.8
VDZ96823.1\|2304992_2306762_+	Terminase, ATPase subunit	Q9T0R3	Escherichia_phage	3.2e-286	81.0
VDZ96824.1\|2306761_2307640_+\|portal	phage portal protein pbsx family	Q6K1J0	Salmonella_virus	2.2e-134	78.9
VDZ96825.1\|2307629_2307800_+\|portal	phage portal protein pbsx family	S4TNX7	Salmonella_phage	1.4e-16	69.6
VDZ96826.1\|2308201_2308303_-	Uncharacterised protein	A0A0M4RE72	Salmonella_phage	3.6e-09	87.9
VDZ96827.1\|2308505_2308940_+	Uncharacterised protein	S4TUD6	Salmonella_phage	4.8e-74	99.3
VDZ96828.1\|2309073_2309706_+	Fic protein family	S4TP71	Salmonella_phage	2.1e-115	100.0
VDZ96829.1\|2310111_2310309_-	Uncharacterised protein	NA	NA	NA	NA
VDZ96830.1\|2310487_2311891_-	replication gene A protein	S4TTC1	Salmonella_phage	1.9e-257	92.7
VDZ96831.1\|2311868_2312372_-	replication gene A protein	U5N0W3	Enterobacteria_phage	6.1e-73	81.5
VDZ96832.1\|2312844_2313027_-	gp83	S4TP00	Salmonella_phage	2.3e-22	83.3
VDZ96833.1\|2313023_2313248_-	C4-type zinc finger protein, DksA/TraR family	A0A0F7LDG9	Escherichia_phage	2.0e-23	75.7
VDZ96834.1\|2313379_2313550_-	11.3 kDa protein in GpA 5'region	Q7Y4C1	Escherichia_virus	2.8e-06	65.9
VDZ96835.1\|2313549_2313774_-	8.3 kDa protein in GpA 5'region	Q7Y4C2	Escherichia_virus	3.4e-23	78.4
VDZ96836.1\|2313837_2314224_-	Replication protein (GpB)	A0A0F7LBQ6	Escherichia_phage	1.5e-66	96.1
VDZ96837.1\|2314220_2314337_-	Replication protein (GpB)	U5N0V9	Enterobacteria_phage	2.0e-08	71.4
VDZ96838.1\|2314506_2314779_-	Cox protein	Q1JS36	Enterobacteria_phage	1.0e-42	87.8
VDZ96839.1\|2314915_2315209_+	phage repressor protein c	Q1JS45	Enterobacteria_phage	1.6e-36	75.3
VDZ96840.1\|2315278_2315983_+\|integrase	Puataive integrase	S4TP66	Salmonella_phage	5.3e-115	91.9
VDZ96841.1\|2316018_2316261_+\|integrase	Puataive integrase	S4TP66	Salmonella_phage	1.7e-36	94.9
2316377:2316423	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3496112 : 3503794

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ98296.1\|3496112_3497105_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
VDZ98297.1\|3497149_3497386_-	Hydroxyaromatic non-oxidative decarboxylaseprotein D	NA	NA	NA	NA
VDZ98298.1\|3497396_3497720_-	Hydroxyaromatic non-oxidative decarboxylaseprotein B, Hydroxyaromatic non-oxidatived ecarboxylase protein C	NA	NA	NA	NA
VDZ98299.1\|3497670_3498084_-	Hydroxyaromatic non-oxidative decarboxylaseprotein B, Hydroxyaromatic non-oxidatived ecarboxylase protein C	NA	NA	NA	NA
VDZ98300.1\|3498064_3498748_-	Hydroxyaromatic non-oxidative decarboxylaseprotein B, Hydroxyaromatic non-oxidatived ecarboxylase protein C	NA	NA	NA	NA
VDZ98301.1\|3498827_3499004_-	decarboxylase	NA	NA	NA	NA
VDZ98302.1\|3498945_3499404_-	decarboxylase	NA	NA	NA	NA
VDZ98303.1\|3499593_3499734_+	Transcriptional regulator hosA	NA	NA	NA	NA
VDZ98304.1\|3499711_3499999_+	Transcriptional regulator hosA	NA	NA	NA	NA
VDZ98305.1\|3500087_3500783_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	2.6e-66	61.1
VDZ98306.1\|3500979_3501603_+	oxidoreductase	A0A077SLF7	Escherichia_phage	3.4e-49	69.4
VDZ98307.1\|3501563_3501809_+	oxidoreductase	A0A077SLF7	Escherichia_phage	1.8e-30	86.5
VDZ98308.1\|3501896_3503159_+	membrane protein	A0A077SLJ7	Escherichia_phage	3.3e-131	61.5
VDZ98309.1\|3503155_3503794_+	sugar aldolase	A0A077SK32	Escherichia_phage	1.8e-85	75.0

DBSCAN-SWA_12

3587916 : 3595292

Pseudomonas_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ98417.1\|3587916_3588414_+	competence damage-inducible protein A	B5TK85	Pseudomonas_phage	7.5e-31	51.0
VDZ98418.1\|3588498_3589071_+	recombinase A	A0A0S2MVG1	Bacillus_phage	6.5e-63	68.1
VDZ98419.1\|3589091_3589562_+	recombinase A	A0A2D1GPX2	Mycobacterium_phage	1.5e-41	64.6
VDZ98420.1\|3589682_3590399_+	Regulatory protein recX	NA	NA	NA	NA
VDZ98421.1\|3590617_3591328_+\|tRNA	alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	9.0e-38	39.1
VDZ98422.1\|3591311_3591851_+\|tRNA	alanyl-tRNA synthetase	A0A2K9L3D8	Tupanvirus	2.2e-12	29.5
VDZ98423.1\|3591837_3592515_+\|tRNA	alanyl-tRNA synthetase	NA	NA	NA	NA
VDZ98424.1\|3592529_3593051_+\|tRNA	alanyl-tRNA synthetase	NA	NA	NA	NA
VDZ98425.1\|3593285_3593471_+	carbon storage regulator	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
VDZ98426.1\|3594758_3595292_+	Phosphatase YqaB	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	1.1e-11	26.6

DBSCAN-SWA_13

3607421 : 3612202

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ98439.1\|3607421_3608339_-	glycine betaine/L-proline transport ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-27	38.8
VDZ98440.1\|3608693_3609239_-	ribonucleoside-diphosphate reductase 2 subunit beta	A0A0N7CCA3	Skermania_phage	4.0e-70	71.8
VDZ98441.1\|3609297_3609903_-	ribonucleoside-diphosphate reductase 2 subunit beta	A0A0M4S3B4	Mycobacterium_phage	4.7e-43	73.3
VDZ98442.1\|3610075_3610369_-	ribonucleoside-diphosphate reductase 2 subunit alpha	R4JDX9	Bacillus_phage	1.2e-12	49.3
VDZ98443.1\|3610434_3610776_-	ribonucleoside-diphosphate reductase 2 subunit alpha	A0A1W6JK74	Lactococcus_phage	2.9e-18	57.5
VDZ98444.1\|3610835_3611792_-	ribonucleoside-diphosphate reductase 2 subunit alpha	A0A2H4P8B4	Corynebacterium_phage	1.1e-99	60.6
VDZ98445.1\|3611791_3612202_-	ribonucleotide reductase stimulatory protein	A0A142F1R4	Bacillus_phage	3.3e-16	41.8

DBSCAN-SWA_14

3648966 : 3809612

200

Salmonella_phage(57.75%)

tRNA,holin,head,integrase,terminase,capsid,plate,tail,portal

attL 3736253:3736270|attR 3775870:3775887

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ98492.1\|3648966_3649533_-	DNA-invertase	A0A0A7NPV4	Enterobacteria_phage	6.7e-68	72.6
VDZ98493.1\|3649624_3651145_+	flagellin	NA	NA	NA	NA
VDZ98494.1\|3651281_3651578_+	repressor	NA	NA	NA	NA
VDZ98495.1\|3652442_3653345_-	Uncharacterised protein	E5G6K9	Salmonella_phage	2.6e-175	100.0
VDZ98496.1\|3653370_3653649_-	Uncharacterised protein	E5G6K9	Salmonella_phage	4.7e-43	100.0
VDZ98497.1\|3653742_3654627_-\|integrase	phage integrase	E5G6L0	Salmonella_phage	4.6e-148	97.0
VDZ98498.1\|3654681_3655314_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	6.3e-59	51.4
VDZ98499.1\|3655433_3655649_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98500.1\|3655712_3656222_+	regulatory protein cII	E5G6L3	Salmonella_phage	1.5e-87	100.0
VDZ98501.1\|3656229_3656430_+	bacteriophage protein	E5G6L4	Salmonella_phage	2.4e-33	100.0
VDZ98502.1\|3656393_3656735_+	Uncharacterised protein	E5G6L5	Salmonella_phage	1.2e-56	100.0
VDZ98503.1\|3656802_3657036_+	putative 8.8 kDa protein in GpA 5'region	E5G6L6	Salmonella_phage	1.7e-33	100.0
VDZ98504.1\|3657035_3657263_+	C4-type zinc finger protein, DksA/TraR family	E5G6L7	Salmonella_phage	2.7e-36	100.0
VDZ98505.1\|3657259_3657808_+	retron adenine methylase	E5G6L8	Salmonella_phage	8.7e-97	100.0
VDZ98506.1\|3657782_3658118_+	retron adenine methylase	E5G6L8	Salmonella_phage	2.8e-58	99.1
VDZ98507.1\|3658114_3660529_+	possible endonuclease	E5G6L9	Salmonella_phage	0.0e+00	100.0
VDZ98508.1\|3660681_3660870_+	bacteriophage protein	E5G6M0	Salmonella_phage	1.4e-27	100.0
VDZ98509.1\|3660880_3661114_+	prophage protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
VDZ98510.1\|3661173_3661905_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98511.1\|3662218_3663883_+	Abortive phage infection protein AIPR	E5G6M2	Salmonella_phage	0.0e+00	100.0
VDZ98512.1\|3663986_3665027_-\|portal	portal vertex-like protein	E5G6M3	Salmonella_phage	5.5e-201	100.0
VDZ98513.1\|3665026_3666745_-\|terminase	terminase, ATPase subunit	E5G6M4	Salmonella_phage	0.0e+00	100.0
VDZ98514.1\|3666937_3667771_+\|capsid	capsid protein	E5G6M5	Salmonella_phage	3.1e-130	100.0
VDZ98515.1\|3667787_3668849_+\|capsid	major capsid-like protein	E5G6M6	Salmonella_phage	2.1e-195	100.0
VDZ98516.1\|3669027_3669504_+\|terminase	terminase, endonuclease subunit	E5G6M7	Salmonella_phage	4.7e-83	99.4
VDZ98517.1\|3669598_3669763_+\|head	phage head completion protein	E5G6M8	Salmonella_phage	3.2e-15	100.0
VDZ98518.1\|3669716_3670064_+\|capsid	putative capsid completion protein	E5G6M8	Salmonella_phage	1.7e-61	99.1
VDZ98519.1\|3670063_3670267_+\|tail	phage tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
VDZ98520.1\|3670270_3670471_+\|holin	holin family protein	E5G6N0	Salmonella_phage	8.1e-29	100.0
VDZ98521.1\|3670467_3671049_+	lysozyme	E5G6N1	Salmonella_phage	3.1e-84	100.0
VDZ98522.1\|3670999_3671407_+	regulatory protein	E5G6N2	Salmonella_phage	8.5e-65	99.3
VDZ98523.1\|3671348_3671933_+\|tail	tail fiber protein	E5G6N3	Salmonella_phage	6.4e-74	100.0
VDZ98524.1\|3671925_3672372_+	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	2.3e-71	99.3
VDZ98525.1\|3672373_3673225_-	Uncharacterised protein	E5G6N5	Salmonella_phage	2.8e-163	100.0
VDZ98526.1\|3673302_3673680_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	2.6e-68	100.0
VDZ98527.1\|3673673_3673880_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.8e-29	100.0
VDZ98528.1\|3673876_3674236_+\|plate	phage baseplate assembly protein W	E5G6N7	Salmonella_phage	1.1e-60	100.0
VDZ98529.1\|3674222_3674585_+\|plate	phage baseplate assembly protein J	E5G6N8	Salmonella_phage	2.5e-52	100.0
VDZ98530.1\|3674584_3675133_+\|plate	phage baseplate assembly protein J	E5G6N8	Salmonella_phage	2.5e-88	100.0
VDZ98531.1\|3675125_3675731_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	1.3e-117	100.0
VDZ98532.1\|3675727_3677581_+	gp19	E5G6P0	Salmonella_phage	0.0e+00	100.0
VDZ98533.1\|3679025_3679250_+	DNA invertase-like protein	E5G6P5	Salmonella_phage	1.5e-34	100.0
VDZ98534.1\|3679352_3680525_+\|tail	major tail sheath protein	E5G6P7	Salmonella_phage	3.4e-223	99.7
VDZ98535.1\|3680534_3681050_+\|tail	phage major tail tube protein FII	E5G6P8	Salmonella_phage	9.3e-93	100.0
VDZ98536.1\|3681153_3681408_+\|tail	phage tail protein E	E5G6P9	Salmonella_phage	7.9e-37	100.0
VDZ98537.1\|3681534_3681948_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	3.1e-38	100.0
VDZ98538.1\|3681913_3682168_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
VDZ98539.1\|3682181_3683141_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	1.3e-164	100.0
VDZ98540.1\|3683185_3683593_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	2.0e-45	95.0
VDZ98541.1\|3683546_3684347_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	4.7e-144	99.6
VDZ98542.1\|3684343_3684829_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.7e-77	100.0
VDZ98543.1\|3684825_3685926_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.6e-201	100.0
VDZ98544.1\|3686764_3687385_-	Putative HlyD family secretion protein	NA	NA	NA	NA
VDZ98545.1\|3687443_3687929_-	Putative HlyD family secretion protein	NA	NA	NA	NA
VDZ98546.1\|3687868_3690118_-	type I secretion protein, ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	1.0e-18	34.0
VDZ98547.1\|3691588_3695365_-	Large repetitive protein	NA	NA	NA	NA
VDZ98548.1\|3695327_3703064_-	large repetitive protein	NA	NA	NA	NA
VDZ98549.1\|3703677_3704205_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.4e-29	47.4
VDZ98550.1\|3704348_3704726_+	Ribosome association toxin RatA	NA	NA	NA	NA
VDZ98551.1\|3704774_3705065_+	UPF0125 protein yfjF	NA	NA	NA	NA
VDZ98552.1\|3705231_3705570_-	small protein A	NA	NA	NA	NA
VDZ98553.1\|3705718_3707380_-	DNA repair protein	NA	NA	NA	NA
VDZ98554.1\|3707465_3708140_-	NAD kinase	NA	NA	NA	NA
VDZ98555.1\|3708084_3708345_-	NAD kinase	NA	NA	NA	NA
VDZ98556.1\|3708621_3709074_+	heat shock protein GrpE	NA	NA	NA	NA
VDZ98557.1\|3709207_3709708_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98558.1\|3709828_3710494_-	corB transporter	NA	NA	NA	NA
VDZ98559.1\|3710671_3710803_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98560.1\|3711142_3711427_-	cytochrome c-type biogenesis heme exporter protein C	NA	NA	NA	NA
VDZ98561.1\|3711446_3711737_-	cytochrome c-type biogenesis heme exporter protein C	NA	NA	NA	NA
VDZ98562.1\|3711675_3711936_-	cytochrome c-type biogenesis heme exporter protein C	NA	NA	NA	NA
VDZ98563.1\|3712101_3713463_+	signal recognition particle protein	NA	NA	NA	NA
VDZ98564.1\|3713715_3714018_+	30S ribosomal protein S16	NA	NA	NA	NA
VDZ98565.1\|3713983_3714532_+	Ribosome maturation factor rimM	NA	NA	NA	NA
VDZ98566.1\|3714576_3715344_+\|tRNA	tRNA(guanine-N1)methyltransferase	NA	NA	NA	NA
VDZ98567.1\|3715384_3715732_+	50S ribosomal subunit protein L19	NA	NA	NA	NA
VDZ98568.1\|3716171_3716576_-	phage late control gene D	Q6K1G4	Salmonella_virus	8.7e-62	93.9
VDZ98569.1\|3716661_3717138_-	phage late control gene D	A0A218M4J7	Erwinia_phage	2.4e-79	97.4
VDZ98570.1\|3717205_3717343_-	phage late control gene D	A0A0M5M5V5	Salmonella_phage	7.0e-16	97.8
VDZ98571.1\|3717339_3717609_-	gp25	A0A0M4RCP0	Salmonella_phage	1.1e-39	93.2
VDZ98572.1\|3717692_3717827_-	gp25	S4TUC3	Salmonella_phage	1.3e-14	97.4
VDZ98573.1\|3717840_3719322_-	gp24	A0A0M3UL85	Salmonella_phage	2.6e-204	81.3
VDZ98574.1\|3719350_3719725_-	gp24	A0A218M4J5	Erwinia_phage	2.1e-46	98.3
VDZ98575.1\|3719750_3720284_-	Laminin subunit beta-2 S-laminin; Laminin chain B3; Flags: Precursor	S4TP64	Salmonella_phage	6.3e-36	100.0
VDZ98576.1\|3720428_3720764_-\|tail	phage tail protein	A0A218M4J8	Erwinia_phage	2.6e-51	97.3
VDZ98577.1\|3720826_3721345_-\|tail	major tail sheath protein FII	S4TNZ0	Salmonella_phage	1.4e-93	99.4
VDZ98578.1\|3721360_3722539_-\|tail	bacteriophage major tail sheath protein FI	S4TRX2	Salmonella_phage	2.9e-222	99.5
VDZ98579.1\|3723619_3725212_-\|tail	phage variable tail-fiber protein	S4TP62	Salmonella_phage	7.8e-239	99.6
VDZ98580.1\|3725222_3725753_-\|tail	orf38; p2 I-like tail protein	Q6K1H3	Salmonella_virus	1.5e-101	97.2
VDZ98581.1\|3725745_3726654_-\|plate	baseplate assembly protein	Q6K1H4	Salmonella_virus	7.7e-159	98.3
VDZ98582.1\|3726660_3726852_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	1.9e-27	98.4
VDZ98583.1\|3726853_3727009_-\|plate	baseplate assembly protein	O80315	Escherichia_phage	2.0e-19	96.1
VDZ98584.1\|3727005_3727647_-\|tail	phage tail protein	Q6K1H6	Salmonella_virus	5.5e-111	96.7
VDZ98585.1\|3727715_3727952_-\|tail	tail completion protein S	O80313	Escherichia_phage	1.1e-35	94.9
VDZ98586.1\|3728218_3728428_-\|tail	tail fiber protein	S4TTA5	Salmonella_phage	4.2e-28	98.4
VDZ98587.1\|3728408_3728630_-\|tail	tail fiber protein	S4TTA5	Salmonella_phage	2.8e-30	100.0
VDZ98588.1\|3729640_3729904_-\|holin	phage holin protein	Q6K1I2	Salmonella_virus	1.2e-35	98.8
VDZ98589.1\|3729944_3730151_-\|tail	phage tail protein	A0A0M3ULF4	Salmonella_phage	4.8e-16	85.4
VDZ98590.1\|3730150_3730495_-\|capsid	capsid completion protein	S4TNY1	Salmonella_phage	3.4e-43	84.0
VDZ98591.1\|3730757_3731024_-\|terminase	terminase, endonuclease subunit	S4TRV8	Salmonella_phage	4.4e-38	100.0
VDZ98592.1\|3731001_3731508_-\|terminase	terminase, endonuclease subunit	Q6K1I5	Salmonella_virus	7.3e-82	99.4
VDZ98593.1\|3731511_3731988_-\|capsid	Phage major capsid protein	A0A0M4R4W2	Salmonella_phage	9.5e-84	99.4
VDZ98594.1\|3732111_3732369_-\|capsid	Phage major capsid protein	S4TUA6	Salmonella_phage	1.1e-38	98.8
VDZ98595.1\|3732393_3732582_-\|capsid	Phage major capsid protein	A0A0M4R4W2	Salmonella_phage	4.3e-24	100.0
VDZ98596.1\|3732677_3732923_-	phage protein V	S4TP53	Salmonella_phage	2.8e-23	84.0
VDZ98597.1\|3733128_3733515_-	phage protein V	S4TP53	Salmonella_phage	6.4e-62	100.0
VDZ98598.1\|3733679_3734336_+\|terminase	Phage terminase ATPase subunit	S4TT96	Salmonella_phage	1.9e-90	98.2
VDZ98599.1\|3734778_3735390_+\|terminase	Phage terminase ATPase subunit	S4TT96	Salmonella_phage	3.7e-104	100.0
VDZ98600.1\|3735448_3735577_+	gp2	A0A218M4L2	Erwinia_phage	3.5e-09	96.7
VDZ98601.1\|3736195_3737218_+\|portal	phage portal pbsx family protein	Q6K1J0	Salmonella_virus	1.5e-198	99.7
3736253:3736270	attL	NA	NA	NA	NA
VDZ98602.1\|3737622_3737724_-	Uncharacterised protein	A0A0M4RE72	Salmonella_phage	3.8e-11	100.0
VDZ98603.1\|3737740_3737935_-	Uncharacterised protein	S4TRZ0	Salmonella_phage	2.0e-19	79.7
VDZ98604.1\|3738068_3738278_-	Uncharacterised protein	Q6K1F0	Salmonella_virus	2.6e-33	97.1
VDZ98605.1\|3738473_3738707_-	DNA-damage-inducible protein DinI	A0A0M4S6H1	Salmonella_phage	8.0e-36	98.7
VDZ98606.1\|3738710_3738893_-	TumA	A0A0M5M1G5	Salmonella_phage	4.1e-27	100.0
VDZ98607.1\|3739440_3741234_-	bacteriophage replication protein	A0A0M3ULG0	Salmonella_phage	0.0e+00	95.0
VDZ98608.1\|3741230_3742061_-	prophage protein	A0A0M4RCP6	Salmonella_phage	7.1e-159	97.1
VDZ98609.1\|3742064_3742343_-	Orf83	A0A0M4R2Q0	Salmonella_phage	2.0e-41	87.0
VDZ98610.1\|3742343_3742565_-	bacteriophage protein	A0A0M4S5Q7	Salmonella_phage	7.1e-34	98.6
VDZ98611.1\|3742564_3742792_-	putative 8.8 kDa protein in GpA 5'region	A0A0M3UL87	Salmonella_phage	9.9e-31	97.3
VDZ98612.1\|3742861_3743062_-	signal peptide protein	A0A0M5M7U3	Salmonella_phage	3.0e-31	97.0
VDZ98613.1\|3743048_3743276_-	bacteriophage protein	A0A0M4RTI3	Salmonella_phage	1.2e-36	97.3
VDZ98614.1\|3743283_3743793_-	Regulatory protein CII	Q6K1F8	Salmonella_virus	9.5e-90	98.8
VDZ98615.1\|3743843_3744197_-	bacteriophage protein	Q6K1F9	Salmonella_virus	1.5e-57	99.1
VDZ98616.1\|3744310_3744724_+	bacteriophage CI repressor	Q6K1G0	Salmonella_virus	8.7e-33	58.8
VDZ98617.1\|3744607_3745108_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98618.1\|3745153_3745717_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98619.1\|3745738_3746788_+\|integrase	Phage integrase	A0A0M4S6G4	Salmonella_phage	3.7e-189	90.8
VDZ98620.1\|3747040_3748261_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
VDZ98621.1\|3748253_3748772_-	putative periplasmic protein	NA	NA	NA	NA
VDZ98622.1\|3749211_3750282_+	Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
VDZ98623.1\|3750291_3751413_+	chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
VDZ98624.1\|3751470_3751614_+	Putative cytoplasmic protein	NA	NA	NA	NA
VDZ98625.1\|3751585_3752380_+	Putative cytoplasmic protein	NA	NA	NA	NA
VDZ98626.1\|3752340_3752790_-	chorismate mutase-P/prephenate dehydratase	NA	NA	NA	NA
VDZ98627.1\|3753070_3753385_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98628.1\|3753812_3754805_-\|integrase	integrase	A0A0F7LBR0	Escherichia_phage	1.4e-108	58.2
VDZ98629.1\|3754871_3755177_-	putative repressor protein C	A0A0M5M1I9	Salmonella_phage	1.6e-15	47.5
VDZ98630.1\|3755274_3755613_+	bacteriophage regulatory protein	NA	NA	NA	NA
VDZ98631.1\|3755638_3755971_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98632.1\|3755980_3756550_+	endodeoxyribonuclease	K7PLW7	Enterobacteria_phage	1.2e-43	46.8
VDZ98633.1\|3756552_3756771_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98634.1\|3756851_3757316_+	putative phage-like protein	A0A077K8T2	Ralstonia_phage	6.5e-37	47.9
VDZ98635.1\|3757282_3757570_+	putative phage-like protein	A0A077K8T2	Ralstonia_phage	3.4e-12	45.3
VDZ98636.1\|3757566_3758091_+	putative phage-like protein	A0A2H4JDT6	uncultured_Caudovirales_phage	3.8e-25	37.5
VDZ98637.1\|3758219_3759464_+	putative phage-like protein	A0A077K8T2	Ralstonia_phage	4.4e-112	49.4
VDZ98638.1\|3759555_3759762_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98639.1\|3759815_3760142_-\|portal	phage portal protein, pbsx family	F1BUM7	Cronobacter_phage	4.1e-30	63.6
VDZ98640.1\|3760132_3760606_-\|portal	phage portal protein, pbsx family	F1BUM7	Cronobacter_phage	1.4e-63	70.7
VDZ98641.1\|3760830_3762615_-\|terminase	Phage terminase ATPase subunit	F1BUM5	Cronobacter_phage	1.1e-246	69.5
VDZ98642.1\|3762672_3763689_+	scaffold protein	F1BUM4	Cronobacter_phage	4.4e-46	52.0
VDZ98643.1\|3763700_3764729_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	5.5e-137	73.1
VDZ98644.1\|3764740_3765439_+\|terminase	phage terminase small subunit	F1BUM0	Cronobacter_phage	1.2e-61	52.2
VDZ98645.1\|3765457_3765649_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98646.1\|3765742_3766195_+\|head	phage head completion protein	F1BUL8	Cronobacter_phage	1.2e-48	64.7
VDZ98647.1\|3766191_3766674_+	putative phage gene	F1BUL7	Cronobacter_phage	3.0e-37	48.7
VDZ98648.1\|3766670_3767375_+	phage protein	F1BUL6	Cronobacter_phage	1.8e-70	59.9
VDZ98649.1\|3767371_3768499_+	Topoisomerase IA	F1BUL5	Cronobacter_phage	5.6e-175	83.5
VDZ98650.1\|3768495_3768951_+	phage protein	F1BUL4	Cronobacter_phage	1.7e-58	71.5
VDZ98651.1\|3768995_3769262_+\|holin	phage holin family 2	C7BGD7	Burkholderia_phage	1.9e-12	49.3
VDZ98652.1\|3769258_3769600_+	hypothetical phage-related protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
VDZ98653.1\|3769599_3769932_+	putative phage-related protein	F1BUL2	Cronobacter_phage	9.7e-35	69.1
VDZ98654.1\|3770078_3770336_+	phage protein	A5X9I7	Aeromonas_virus	2.3e-20	61.0
VDZ98655.1\|3770523_3772491_+\|tail	phage tail tape measure protein, TP901 family, core region	F1BUK9	Cronobacter_phage	4.7e-270	70.5
VDZ98656.1\|3772487_3772817_+	phage protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
VDZ98657.1\|3772813_3773221_+\|plate	Phage baseplate	F1BUK6	Cronobacter_phage	1.0e-54	83.3
VDZ98658.1\|3773213_3773636_+\|plate	Phage baseplate	F1BUK6	Cronobacter_phage	1.1e-51	83.9
VDZ98659.1\|3773601_3774000_+\|plate	Phage baseplate	F1BUK6	Cronobacter_phage	1.6e-47	65.6
VDZ98660.1\|3773992_3774580_+\|tail	Bacteriophage P2-related tail formation protein	F1BUK5	Cronobacter_phage	3.8e-90	82.6
VDZ98661.1\|3774589_3776824_+	gp19	Q8HAB4	Salmonella_phage	7.2e-182	73.7
3775870:3775887	attR	NA	NA	NA	NA
VDZ98662.1\|3776836_3777391_+	Gp20	S4TUB9	Salmonella_phage	1.1e-88	87.8
VDZ98663.1\|3777380_3778106_+	phage protein	F1BUK1	Cronobacter_phage	2.3e-68	56.8
VDZ98664.1\|3778077_3778623_+	phage protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
VDZ98665.1\|3778622_3780326_+	phage protein	F1BUJ7	Cronobacter_phage	1.6e-221	81.1
VDZ98666.1\|3780224_3780710_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98667.1\|3781444_3782821_+	chromosome segregation protein	NA	NA	NA	NA
VDZ98668.1\|3783054_3783441_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98669.1\|3783598_3783937_-	sigma(54) modulation protein	NA	NA	NA	NA
VDZ98670.1\|3784208_3784946_-	lipoprotein	NA	NA	NA	NA
VDZ98671.1\|3785077_3786058_+	ftsH suppressor protein SfhB	NA	NA	NA	NA
VDZ98672.1\|3786054_3786786_+	membrane protein	NA	NA	NA	NA
VDZ98673.1\|3786915_3789489_+	protein disaggregation chaperone	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
VDZ98674.1\|3795662_3796022_+	Putative cytoplasmic protein	E3SMI8	Prochlorococcus_phage	7.5e-25	50.0
VDZ98675.1\|3796125_3796788_+	alpha-ketoglutarate transporter	Q6JIH2	Burkholderia_virus	1.0e-27	34.5
VDZ98676.1\|3796744_3797428_+	alpha-ketoglutarate transporter	NA	NA	NA	NA
VDZ98677.1\|3797424_3797748_-	lipoprotein	NA	NA	NA	NA
VDZ98678.1\|3797791_3799147_-	phosphatidylserine synthase	NA	NA	NA	NA
VDZ98679.1\|3799261_3801922_-	acyl-CoA synthetase	NA	NA	NA	NA
VDZ98680.1\|3801975_3802656_-	DTW domain-containing protein	NA	NA	NA	NA
VDZ98681.1\|3802807_3803149_-	thioredoxin 2	A0A0K2FIM3	Achromobacter_phage	2.3e-07	44.3
VDZ98682.1\|3803352_3804390_+\|tRNA	tRNA/rRNA methyltransferase YfiF	NA	NA	NA	NA
VDZ98683.1\|3804505_3804979_-	uracil-DNA glycosylase	U5U481	Elephant_endotheliotropic_herpesvirus	3.2e-39	52.9
VDZ98684.1\|3804927_3805197_-	uracil-DNA glycosylase	A0A0N9QWR4	Chrysochromulina_ericina_virus	8.2e-08	38.9
VDZ98685.1\|3805515_3805899_+	Pyruvate formate-lyase	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
VDZ98686.1\|3805960_3806548_-	Transporter LysE family	NA	NA	NA	NA
VDZ98687.1\|3806650_3806989_+	LysR-family transcriptional regulator	NA	NA	NA	NA
VDZ98688.1\|3807011_3807380_+	LysR family transcriptional regulator	NA	NA	NA	NA
VDZ98689.1\|3807330_3807552_+	LysR family transcriptional regulator	NA	NA	NA	NA
VDZ98690.1\|3807569_3808904_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
VDZ98691.1\|3809033_3809612_+\|tRNA	tRNA (adenine-N(6)-)-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_15

3814991 : 3862724

Salmonella_phage(37.93%)

holin,head,integrase,terminase,transposase,tail,portal

attL 3807133:3807146|attR 3830738:3830751

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3807133:3807146	attL	NA	NA	NA	NA
VDZ98698.1\|3814991_3816398_+\|integrase	integrase	H6WRW7	Salmonella_phage	5.5e-228	94.5
VDZ98699.1\|3816524_3816764_-	putative bacteriophage protein	S4TR31	Salmonella_phage	2.0e-37	100.0
VDZ98700.1\|3816806_3817916_-	Gifsy-2 prophage RecT	H6WRX0	Salmonella_phage	1.8e-205	99.5
VDZ98701.1\|3817926_3819567_-	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	3.0e-254	99.3
VDZ98702.1\|3819529_3820855_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	3.1e-241	97.7
VDZ98703.1\|3820981_3821269_-	Gifsy-1 prophage protein	H6WRX2	Salmonella_phage	8.6e-48	98.9
VDZ98704.1\|3821353_3821512_-	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
VDZ98705.1\|3822113_3822632_-	putative prophage protein	NA	NA	NA	NA
VDZ98706.1\|3822631_3823018_-	putative prophage protein	NA	NA	NA	NA
VDZ98707.1\|3823010_3823850_-	chromosome partitioning ATPase	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
VDZ98708.1\|3823908_3824304_-	putative regulator	K7PM35	Enterobacteria_phage	1.9e-37	61.4
VDZ98709.1\|3824403_3824646_+	phage regulatory protein	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
VDZ98710.1\|3824659_3825070_+	repressor	A0A0M4RU01	Salmonella_phage	2.7e-50	100.0
VDZ98711.1\|3825072_3825792_+	replication protein O	A0A0M5M7Y1	Salmonella_phage	1.5e-35	61.5
VDZ98712.1\|3825954_3826323_+	replication protein O of prophage CP-933X	I6PBN0	Cronobacter_phage	2.8e-35	60.3
VDZ98713.1\|3826664_3827363_+	Eaa1	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
VDZ98714.1\|3827471_3828104_+	putative prophage protein	NA	NA	NA	NA
VDZ98715.1\|3828346_3828580_+	Gifsy-1 prophage DinI	H6WRY5	Salmonella_phage	5.6e-37	100.0
VDZ98716.1\|3828696_3828945_+	phage-like protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
VDZ98717.1\|3828979_3829582_+	bacteriophage protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
VDZ98718.1\|3829581_3829788_+	Phage protein	S4TNP0	Salmonella_phage	1.7e-34	97.1
VDZ98719.1\|3829790_3830402_+	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
VDZ98720.1\|3830398_3830539_+	DNA breaking-rejoining protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
VDZ98721.1\|3830535_3831213_+	antitermination protein	I6PDF8	Cronobacter_phage	7.7e-63	54.0
3830738:3830751	attR	NA	NA	NA	NA
VDZ98722.1\|3831772_3832051_+	antirepressor	A0A088CD42	Shigella_phage	1.8e-05	62.2
VDZ98723.1\|3832960_3833434_-	GogA	Q9MBM2	Phage_Gifsy-1	2.4e-87	100.0
VDZ98724.1\|3833916_3834063_+\|holin	bacteriophage holin	A0A0M3ULK9	Salmonella_phage	1.7e-20	100.0
VDZ98725.1\|3834236_3834689_+	Lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
VDZ98726.1\|3834685_3835159_+	putative endopeptidase	A0A0M4RD57	Salmonella_phage	3.2e-71	93.0
VDZ98727.1\|3835394_3835796_-	Inhibitor of g-type lysozyme	NA	NA	NA	NA
VDZ98728.1\|3836082_3836628_+\|terminase	terminase	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
VDZ98729.1\|3836599_3837106_+\|terminase	terminase	O64317	Escherichia_phage	3.2e-61	66.7
VDZ98730.1\|3837056_3838532_+\|terminase	terminase	A0A2I6TC92	Escherichia_phage	8.6e-192	65.5
VDZ98731.1\|3838515_3838719_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
VDZ98732.1\|3838676_3840296_+\|portal	phage portal protein, lambda family	K7P6U7	Enterobacteria_phage	9.8e-189	62.8
VDZ98733.1\|3840285_3841083_+	scaffold protein	A0A0K2FI53	Enterobacteria_phage	2.9e-77	59.4
VDZ98734.1\|3841075_3841279_+	scaffold protein	NA	NA	NA	NA
VDZ98735.1\|3841292_3841784_+	scaffold protein	NA	NA	NA	NA
VDZ98736.1\|3841796_3842144_+	Head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
VDZ98737.1\|3842198_3843227_+\|head	head protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
VDZ98738.1\|3843284_3843644_+	DNA packaging protein	NA	NA	NA	NA
VDZ98739.1\|3843654_3844038_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
VDZ98740.1\|3844065_3844644_+	Gifsy-1 prophagei VmtZ	A5LH33	Enterobacteria_phage	3.7e-82	80.2
VDZ98741.1\|3844692_3845823_-	virulence factor	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
VDZ98742.1\|3845931_3846333_+\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
VDZ98743.1\|3846343_3847087_+\|tail	putative tail component of prophage	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
VDZ98744.1\|3847137_3847533_+\|tail	minor tail protein	A5LH36	Enterobacteria_phage	2.3e-30	56.5
VDZ98745.1\|3847553_3847868_+\|tail	minor tail-like protein	A5LH37	Enterobacteria_phage	2.3e-30	62.9
VDZ98746.1\|3847839_3848688_+\|tail	tail protein	A0A291AWX1	Escherichia_phage	5.5e-42	58.7
VDZ98747.1\|3848687_3848780_+	Uncharacterised protein	A5LH38	Enterobacteria_phage	2.2e-05	82.1
VDZ98748.1\|3848766_3849015_+\|tail	tail protein	E4WL33	Enterobacteria_phage	1.5e-16	80.0
VDZ98749.1\|3849004_3849649_-	Uncharacterised protein	NA	NA	NA	NA
VDZ98750.1\|3849720_3849873_+\|tail	tail protein	A5LH38	Enterobacteria_phage	6.4e-10	74.0
VDZ98751.1\|3849869_3850346_+\|tail	tail protein	A5LH38	Enterobacteria_phage	2.8e-19	51.8
VDZ98752.1\|3850480_3851047_+\|tail	tail protein	A5LH38	Enterobacteria_phage	2.4e-17	51.5
VDZ98753.1\|3851301_3851844_+\|tail	Minor tail protein L	A0A1B5FP81	Escherichia_phage	5.1e-57	68.1
VDZ98754.1\|3852010_3852748_+	Tail fiber component K	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
VDZ98755.1\|3852786_3853128_+\|tail	tail protein	A0A291AWV5	Escherichia_phage	1.5e-38	74.3
VDZ98756.1\|3853102_3853294_+\|tail	tail protein	A0A2R9YJH6	Escherichia_phage	7.0e-22	89.5
VDZ98757.1\|3853355_3854792_+\|tail	Phage tail fiber protein	A0A2I6TCW5	Escherichia_phage	3.7e-224	80.6
VDZ98758.1\|3854752_3855673_+\|tail	Phage tail fiber protein	A5LH43	Enterobacteria_phage	1.6e-111	74.0
VDZ98759.1\|3855627_3856746_+\|tail	Phage tail fiber protein	K7PKJ2	Enterobacteria_phage	1.1e-87	81.6
VDZ98760.1\|3856758_3857001_+	Uncharacterised protein	NA	NA	NA	NA
VDZ98761.1\|3857054_3857312_+\|tail	side tail fiber protein	Q687E6	Enterobacteria_phage	2.9e-18	85.7
VDZ98762.1\|3858101_3858980_+	DNA recombinase-like protein	A0A0U2SH60	Escherichia_phage	1.0e-43	76.0
VDZ98763.1\|3859054_3859426_+\|tail	side tail fiber protein	E5G6P0	Salmonella_phage	2.0e-12	67.5
VDZ98764.1\|3859422_3860247_+	UPF0189 protein LA_4133	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
VDZ98765.1\|3861950_3862136_-\|transposase	transposase	NA	NA	NA	NA
VDZ98766.1\|3862250_3862724_-\|transposase	transposase-like protein	NA	NA	NA	NA

DBSCAN-SWA_16

3908363 : 3918059

Heterosigma_akashiwo_virus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ98820.1\|3908363_3908801_-	Uncharacterised protein	A0A1C9C5K3	Heterosigma_akashiwo_virus	8.1e-05	26.7
VDZ98821.1\|3908945_3909632_-	extragenic suppressor protein SuhB	NA	NA	NA	NA
VDZ98822.1\|3909866_3910598_+	RNA methyltransferase	NA	NA	NA	NA
VDZ98823.1\|3910757_3911252_+	Iron-sulfur cluster regulator IscR	NA	NA	NA	NA
VDZ98824.1\|3911432_3912095_+	L-cysteine desulfurase	A0A1X7C038	Faustovirus	3.1e-24	39.5
VDZ98825.1\|3912054_3912621_+	L-cysteine desulfurase	NA	NA	NA	NA
VDZ98826.1\|3912674_3913061_+	NifU-like protein	A0A218MKD1	uncultured_virus	2.4e-53	78.9
VDZ98827.1\|3913089_3913413_+	Iron binding protein IscA for iron-sulfur cluster assembly	A0A2H4N7N5	Lake_Baikal_phage	5.4e-22	48.6
VDZ98828.1\|3913608_3914124_+	chaperone protein HscB	NA	NA	NA	NA
VDZ98829.1\|3914136_3914532_+	chaperone protein HscA	A0A2K9L0P4	Tupanvirus	6.8e-11	36.9
VDZ98830.1\|3914485_3915988_+	chaperone protein HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.2e-71	40.7
VDZ98831.1\|3915989_3916319_+	ferredoxin	NA	NA	NA	NA
VDZ98832.1\|3916337_3916538_+	FeS assembly protein IscX	NA	NA	NA	NA
VDZ98833.1\|3916784_3918059_+	peptidase B	Q6GYZ8	Mycoplasma_phage	5.4e-33	40.0

DBSCAN-SWA_17

3979520 : 3983541

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ98900.1\|3979520_3979751_-	phosphoribosylglycinamidine myltransferase	E3SNR5	Prochlorococcus_phage	9.8e-10	47.1
VDZ98901.1\|3979713_3980049_-	phosphoribosylglycinamidine myltransferase	E3SNR5	Prochlorococcus_phage	2.7e-08	43.9
VDZ98902.1\|3979993_3980104_-	phosphoribosylglycinamidine myltransferase	NA	NA	NA	NA
VDZ98903.1\|3980103_3980553_-	phosphoribosylaminoimidazole synthetase (AIR synthetase)	A0A0E3FK46	Synechococcus_phage	1.0e-18	36.5
VDZ98904.1\|3980536_3981142_-	phosphoribosylaminoimidazole synthetase	Q58MH8	Prochlorococcus_phage	7.9e-43	52.2
VDZ98905.1\|3981607_3982165_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
VDZ98906.1\|3982271_3982829_+	uracil permease	Q9KX94	Enterobacteria_phage	5.8e-24	42.3
VDZ98907.1\|3982825_3983080_+	uracil permease	NA	NA	NA	NA
VDZ98908.1\|3983154_3983541_+	uracil permease	Q9KX94	Enterobacteria_phage	4.6e-12	36.0

DBSCAN-SWA_18

4204601 : 4211805

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ99186.1\|4204601_4205321_+	glycerophosphoryl diester phosphodiesterase periplasmic	A0A220BYK6	Staphylococcus_phage	3.4e-08	46.0
VDZ99187.1\|4205274_4205673_+	glycerophosphoryl diester phosphodiesterase periplasmic	NA	NA	NA	NA
VDZ99188.1\|4205787_4206666_-	transcriptional regulator	NA	NA	NA	NA
VDZ99189.1\|4206800_4207799_+	permease	NA	NA	NA	NA
VDZ99190.1\|4208020_4208275_-	ferredoxin	G9IAA2	Pseudomonas_phage	3.1e-25	74.6
VDZ99191.1\|4208274_4209405_-	ribonucleoside-diphosphate reductase 1 subunit beta	G9IAA3	Pseudomonas_phage	8.7e-176	79.4
VDZ99192.1\|4209517_4209838_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	A0A2D1GNB1	Pseudoalteromonas_phage	2.3e-33	62.3
VDZ99193.1\|4209824_4210481_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	I3UMG3	Colwellia_phage	2.3e-56	71.5
VDZ99194.1\|4210440_4211805_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	A0A1W5PTL2	Pseudoalteromonas_phage	1.4e-191	72.9

DBSCAN-SWA_19

4215535 : 4222465

Oenococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ99200.1\|4215535_4216450_+	MR-MLE family protein	Q6A202	Oenococcus_phage	1.2e-47	37.9
VDZ99201.1\|4216859_4217303_+	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	3.3e-22	43.7
VDZ99202.1\|4217430_4219038_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	6.6e-36	25.6
VDZ99203.1\|4219003_4219501_+	DNA gyrase subunit A	A0A1B1IVS2	uncultured_Mediterranean_phage	1.0e-16	33.3
VDZ99204.1\|4219618_4221709_+	sensor protein RcsC	Q8QKV7	Ectocarpus_siliculosus_virus	8.6e-28	34.7
VDZ99205.1\|4221654_4221969_+	sensor protein RcsC	NA	NA	NA	NA
VDZ99206.1\|4221937_4222465_+	sensor protein RcsC	A0A1V0SGX0	Hokovirus	2.0e-05	26.3

DBSCAN-SWA_20

4324967 : 4334157

Enterobacteria_phage(80.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ99345.1\|4324967_4325915_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.8e-10	27.8
VDZ99346.1\|4325898_4326630_+	putative permease transmembrane component	NA	NA	NA	NA
VDZ99347.1\|4326610_4326718_-	membrane protein	NA	NA	NA	NA
VDZ99348.1\|4326777_4327020_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	1.7e-12	91.2
VDZ99349.1\|4327295_4327433_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	5.4e-16	97.6
VDZ99350.1\|4327734_4328232_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	9.7e-63	89.9
VDZ99351.1\|4328269_4329022_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	2.9e-127	97.5
VDZ99352.1\|4329032_4329422_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	3.8e-54	80.6
VDZ99353.1\|4329418_4329670_+	two-component system response regulator	NA	NA	NA	NA
VDZ99354.1\|4329795_4330140_+	two-component system response regulator	NA	NA	NA	NA
VDZ99355.1\|4330187_4330388_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	2.1e-16	81.1
VDZ99356.1\|4330450_4330657_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	1.3e-26	88.2
VDZ99357.1\|4330813_4330945_-	lipoprotein	NA	NA	NA	NA
VDZ99358.1\|4331405_4331882_-	lipoprotein	Q9EYF5	Enterobacteria_phage	3.9e-45	77.0
VDZ99359.1\|4332122_4332794_-\|tRNA	methionyl-tRNA synthetase	NA	NA	NA	NA
VDZ99360.1\|4332759_4334157_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	3.0e-53	28.5

DBSCAN-SWA_21

4402903 : 4411500

Enterobacteria_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ99450.1\|4402903_4403197_+	Colanic acid biosynthesis protein wcaM	A0A291LBB9	Klebsiella_phage	2.3e-11	40.9
VDZ99451.1\|4403548_4403734_+	Colanic acid biosynthesis protein wcaM	NA	NA	NA	NA
VDZ99452.1\|4403911_4404538_+	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	9.8e-28	51.9
VDZ99453.1\|4404486_4404753_+	UTP-glucose-1-phosphate uridylyltransferase	NA	NA	NA	NA
VDZ99454.1\|4405179_4406265_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
VDZ99455.1\|4406264_4406534_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
VDZ99456.1\|4406517_4407165_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
VDZ99457.1\|4407276_4407597_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.7e-34	66.3
VDZ99458.1\|4407656_4408094_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.1e-45	61.0
VDZ99459.1\|4408097_4408646_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-52	58.0
VDZ99460.1\|4408651_4409491_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
VDZ99461.1\|4409642_4410416_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
VDZ99462.1\|4410420_4411500_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.3e-16	24.5

DBSCAN-SWA_22

4509416 : 4521279

Burkholderia_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ99593.1\|4509416_4509836_+	umuDC operon protein-like protein	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
VDZ99594.1\|4509838_4511107_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
VDZ99595.1\|4512233_4513445_-	outer membrane protein N	Q1MVN1	Enterobacteria_phage	1.3e-108	56.0
VDZ99596.1\|4514094_4514406_+	membrane protein	NA	NA	NA	NA
VDZ99597.1\|4514486_4515119_+	metal-dependent phospho hydrolase	A0A1D6Y7U0	Golden_Marseillevirus	6.6e-08	27.1
VDZ99598.1\|4515256_4515958_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.7e-36	61.2
VDZ99599.1\|4515932_4516331_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-26	50.7
VDZ99600.1\|4516414_4516690_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	5.4e-15	72.1
VDZ99601.1\|4516670_4516832_+	patch repair protein	NA	NA	NA	NA
VDZ99602.1\|4516828_4517140_+	patch repair protein	E5E3X5	Burkholderia_phage	3.1e-19	48.4
VDZ99603.1\|4517243_4517414_-	inner membrane transporter yedA	NA	NA	NA	NA
VDZ99604.1\|4517367_4518051_-	inner membrane transporter yedA	NA	NA	NA	NA
VDZ99605.1\|4518395_4519187_+	putative inner membrane protein	NA	NA	NA	NA
VDZ99606.1\|4519216_4519402_+	Uncharacterized small protein	NA	NA	NA	NA
VDZ99607.1\|4519566_4521279_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.6e-19	37.4

DBSCAN-SWA_23

4622152 : 4654098

Enterobacteria_phage(30.0%)

transposase,tail,protease,integrase

attL 4623508:4623523|attR 4638549:4638564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VDZ99762.1\|4622152_4622830_-\|integrase	phage integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	4.5e-63	54.8
VDZ99763.1\|4622826_4623774_-	exodeoxyribonuclease 8	Q9QF34	Lambdoid_phage	1.3e-55	66.7
4623508:4623523	attL	NA	NA	NA	NA
VDZ99764.1\|4623963_4624251_+	lytic enzyme	Q8HA86	Salmonella_phage	8.1e-38	92.7
VDZ99765.1\|4624470_4624782_+	Protein gp55	NA	NA	NA	NA
VDZ99766.1\|4625038_4625206_-	lytic enzyme	NA	NA	NA	NA
VDZ99767.1\|4625514_4625778_+	DNA breaking-rejoining protein	Q9EYD0	Enterobacteria_phage	9.1e-20	59.8
VDZ99768.1\|4625932_4626361_+\|tail	caudovirales tail fibre assembly protein	A0A0M4QWS3	Salmonella_phage	2.1e-50	91.7
VDZ99769.1\|4627445_4627715_+	Uncharacterised protein	NA	NA	NA	NA
VDZ99770.1\|4627935_4628202_+	phage encoded protein PagM	NA	NA	NA	NA
VDZ99771.1\|4628383_4628506_+	Uncharacterised protein	NA	NA	NA	NA
VDZ99772.1\|4628954_4629569_-	disulfide bond formation protein	NA	NA	NA	NA
VDZ99773.1\|4629578_4629737_-	membrane protein	NA	NA	NA	NA
VDZ99774.1\|4629869_4630784_-	drug/metabolite transporter DMT permease	NA	NA	NA	NA
VDZ99775.1\|4632078_4632447_-	putative cytoplasmic protein	K7PHK0	Enterobacteria_phage	5.4e-18	39.8
VDZ99776.1\|4632570_4633428_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-20	29.0
VDZ99777.1\|4633427_4633574_+\|transposase	transposase	NA	NA	NA	NA
VDZ99778.1\|4634857_4635004_+	acetyltransferase	NA	NA	NA	NA
VDZ99779.1\|4634997_4635309_+	acetyltransferase	NA	NA	NA	NA
VDZ99780.1\|4635511_4635976_-	GlcNAc transferase	NA	NA	NA	NA
VDZ99781.1\|4635978_4636515_-	lipopolysaccharide 1,2-N-acetylglucosaminetransferase	NA	NA	NA	NA
VDZ99782.1\|4637493_4638006_-\|integrase	phage integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.5e-39	49.4
VDZ99783.1\|4638116_4638224_-	Uncharacterised protein	NA	NA	NA	NA
VDZ99784.1\|4638351_4639365_-	O-actetyl transferase protein	NA	NA	NA	NA
4638549:4638564	attR	NA	NA	NA	NA
VDZ99785.1\|4640061_4640265_-	Outer membrane usher protein papC Flags: Precursor	NA	NA	NA	NA
VDZ99786.1\|4641820_4641994_+	Uncharacterised protein	NA	NA	NA	NA
VDZ99787.1\|4642249_4642726_-	Uncharacterised protein	NA	NA	NA	NA
VDZ99788.1\|4643053_4643449_-	protein ycgX	C6ZCX4	Enterobacteria_phage	7.0e-16	32.8
VDZ99789.1\|4644132_4644855_+	guanine nucleotide exchange factor SopE	NA	NA	NA	NA
VDZ99790.1\|4645138_4645231_+	Uncharacterised protein	NA	NA	NA	NA
VDZ99791.1\|4645526_4646177_+	Serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.1e-58	51.4
VDZ99792.1\|4646195_4646387_-	putative secreted protein	NA	NA	NA	NA
VDZ99793.1\|4646497_4646737_-	conserved domain protein	NA	NA	NA	NA
VDZ99794.1\|4646851_4648213_-	rRNA (cytosine-C(5)-)-methyltransferase RsmF	NA	NA	NA	NA
VDZ99795.1\|4648263_4648989_-	mce-related protein	NA	NA	NA	NA
VDZ99796.1\|4648988_4649768_-	mce-related protein	NA	NA	NA	NA
VDZ99797.1\|4649827_4650442_-	mce-related protein	NA	NA	NA	NA
VDZ99798.1\|4650459_4650711_-	mce-related protein	NA	NA	NA	NA
VDZ99799.1\|4650978_4651392_-	Paraquat-inducible protein A	NA	NA	NA	NA
VDZ99800.1\|4651661_4651775_-	Uncharacterised protein	NA	NA	NA	NA
VDZ99801.1\|4651774_4652041_-	Paraquat-inducible protein A	NA	NA	NA	NA
VDZ99802.1\|4652451_4652778_+	GAF domain-containing protein	NA	NA	NA	NA
VDZ99803.1\|4653145_4653580_+	ProP effector	NA	NA	NA	NA
VDZ99804.1\|4653705_4654098_+\|protease	Tail-specific protease precursor	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134140

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection