CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134141	Salmonella enterica subsp. salamae strain NCTC5773 genome assembly, chromosome: 1	3 crisprs	PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	2	45	15	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: LR134141_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134141_2

957756-958699

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCTAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CRT

15 spacers

cas3,cas8e

The CRISPR arrays of LR134141_2

>merge|LR134141|2|957756-958699|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCTAGCGGGGATAAACCGGGTCGGATCAGCTGCGGCGGATAGTCCATTCAGTGTTCCCCGCGCTAGCGGGGATAAACCGATTAGCGGCGTTTAACGTCATCAGGTTTTCAAGTGTTCCCCGCGCTAGCGGGGATAAACCGAGAACTGACTGTAGGTAGCATTGTTATTGTTCGTGTTCCCCGCGCTAGCGGGGATAAACCGGGACGTCTTTTTATTTCATCTCCTTTTCTCGCGTGTTCCCCGCGCTAGCGGGGATAAACCGGTTTAGGGGGAACAAATCCGGGGTGAGGAATAGTGTTCCCCGCGCTAGCGGGGATAAACCTAGATGGCCGCAAGACTCAGACGCGGCGGATCAGTGTTCCCCGCGCTAGCGGGGATAAACCGAGTATGCAAAGTTGATTCTGTCGAATAGCGGGGTGTTCCCCGCGCTAGCGGGGATAAACCGTTTGCGCGTGAACGTGGCTCTTGCGGTCGAGAGTGTTCCCCGCGCTAGCGGGGATAAACTACTTTTTCGCCGGTTAACGGTTCAAAATCCTGCGTGTTCCCCGCGCTAGCGGGGATAAACCGAGATTATCTACCAGGTCGCTGGGGGCCGGTGCGTGTTCCCCGCGCTAGCGGGGATAAACCGTAAACCCCTGTTTATAATCTTTGCTCACCTTTGTGTTCCCCGCGCTAGCGGGGATAAACCGAAAATACAGTGTGGGAAAAAAGTAAAAACAATGTGTTCCCCGCGCTAGCGGGGATAAACCGAAATCGAGACCGATAGGCTGGCGGCGCACCCGGTGTTCCCCGCGCTAGCGGGGATAAACCGATGGCTATTTCTCAAAACTTTAAAACGCAGGTGTGTTCCCCGCGCTAGCGGGGATAAACCGGGGGCAGGGAGCCGCCTCAGTTGTACCAGGAAGTGTTCCCCGCGCTAGCGGGGATAGCCGT

>LR134141|2|1|957756-958637|PILER-CR
GTGTTCCCCGCGCTAGCGGGGATAAACC	GGGTCGGATCAGCTGCGGCGGATAGTCCATTCA
GTGTTCCCCGCGCTAGCGGGGATAAACC	GATTAGCGGCGTTTAACGTCATCAGGTTTTCAA
GTGTTCCCCGCGCTAGCGGGGATAAACC	GAGAACTGACTGTAGGTAGCATTGTTATTGTTC
GTGTTCCCCGCGCTAGCGGGGATAAACC	GGGACGTCTTTTTATTTCATCTCCTTTTCTCGC
GTGTTCCCCGCGCTAGCGGGGATAAACC	GGTTTAGGGGGAACAAATCCGGGGTGAGGAATA
GTGTTCCCCGCGCTAGCGGGGATAAACC	TAGATGGCCGCAAGACTCAGACGCGGCGGATCA
GTGTTCCCCGCGCTAGCGGGGATAAACC	GAGTATGCAAAGTTGATTCTGTCGAATAGCGGG
GTGTTCCCCGCGCTAGCGGGGATAAACC	GTTTGCGCGTGAACGTGGCTCTTGCGGTCGAGA
GTGTTCCCCGCGCTAGCGGGGATAAACT	ACTTTTTCGCCGGTTAACGGTTCAAAATCCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACC	GAGATTATCTACCAGGTCGCTGGGGGCCGGTGC
GTGTTCCCCGCGCTAGCGGGGATAAACC	GTAAACCCCTGTTTATAATCTTTGCTCACCTTT
GTGTTCCCCGCGCTAGCGGGGATAAACC	GAAAATACAGTGTGGGAAAAAAGTAAAAACAAT
GTGTTCCCCGCGCTAGCGGGGATAAACC	GAAATCGAGACCGATAGGCTGGCGGCGCACCCG
GTGTTCCCCGCGCTAGCGGGGATAAACC	GATGGCTATTTCTCAAAACTTTAAAACGCAGGT
GTGTTCCCCGCGCTAGCGGGGATAAACC

>LR134141|2|2|957756-958699|CRISPRCasFinder
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGTCGGATCAGCTGCGGCGGATAGTCCATTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATTAGCGGCGTTTAACGTCATCAGGTTTTCAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGAACTGACTGTAGGTAGCATTGTTATTGTTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGACGTCTTTTTATTTCATCTCCTTTTCTCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTTTAGGGGGAACAAATCCGGGGTGAGGAATA
GTGTTCCCCGCGCTAGCGGGGATAAACCT	AGATGGCCGCAAGACTCAGACGCGGCGGATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGTATGCAAAGTTGATTCTGTCGAATAGCGGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTTGCGCGTGAACGTGGCTCTTGCGGTCGAGA
GTGTTCCCCGCGCTAGCGGGGATAAACTA	CTTTTTCGCCGGTTAACGGTTCAAAATCCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTATCTACCAGGTCGCTGGGGGCCGGTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TAAACCCCTGTTTATAATCTTTGCTCACCTTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAATACAGTGTGGGAAAAAAGTAAAAACAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAATCGAGACCGATAGGCTGGCGGCGCACCCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGGCTATTTCTCAAAACTTTAAAACGCAGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGGCAGGGAGCCGCCTCAGTTGTACCAGGAA
GTGTTCCCCGCGCTAGCGGGGATAGCCGT

>LR134141|2|1|957756-958699|CRT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGTCGGATCAGCTGCGGCGGATAGTCCATTCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATTAGCGGCGTTTAACGTCATCAGGTTTTCAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGAACTGACTGTAGGTAGCATTGTTATTGTTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGACGTCTTTTTATTTCATCTCCTTTTCTCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTTTAGGGGGAACAAATCCGGGGTGAGGAATA
GTGTTCCCCGCGCTAGCGGGGATAAACCT	AGATGGCCGCAAGACTCAGACGCGGCGGATCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGTATGCAAAGTTGATTCTGTCGAATAGCGGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTTGCGCGTGAACGTGGCTCTTGCGGTCGAGA
GTGTTCCCCGCGCTAGCGGGGATAAACTA	CTTTTTCGCCGGTTAACGGTTCAAAATCCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTATCTACCAGGTCGCTGGGGGCCGGTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TAAACCCCTGTTTATAATCTTTGCTCACCTTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAAATACAGTGTGGGAAAAAAGTAAAAACAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AAATCGAGACCGATAGGCTGGCGGCGCACCCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGGCTATTTCTCAAAACTTTAAAACGCAGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGGCAGGGAGCCGCCTCAGTTGTACCAGGAA
GTGTTCCCCGCGCTAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
LR134141.1\|VEA01064.1\|953630_955268_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LR134141.1\|VEA01071.1\|964092_964827_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LR134141.1\|VEA01063.1\|952902_953403_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LR134141.1\|VEA01057.1\|946140_948897_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	unknown	unknown	gnl\|CDD\|236848
LR134141.1\|VEA01068.1\|959683_960046_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	gnl\|CDD\|238264
LR134141.1\|VEA01074.1\|967562_967997_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LR134141.1\|VEA01061.1\|951891_952536_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LR134141.1\|VEA01075.1\|968223_968976_+\|CRISPR-associated-helicase-Cas3-protein	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LR134141.1\|VEA01073.1\|966721_967465_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LR134141.1\|VEA01059.1\|950301_950673_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LR134141.1\|VEA01070.1\|962271_963984_+\|sulfite-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|237402
LR134141.1\|VEA01069.1\|960472_962272_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
LR134141.1\|VEA01066.1\|956787_957459_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
LR134141.1\|VEA01058.1\|948954_950250_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	gnl\|CDD\|237291
LR134141.1\|VEA01062.1\|952610_952931_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
LR134141.1\|VEA01065.1\|955350_956649_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LR134141.1\|VEA01076.1\|969087_970545_+\|CRISPR-associated-protein-CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LR134141.1\|VEA01060.1\|950638_951940_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LR134141.1\|VEA01067.1\|958796_959594_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|224158
LR134141.1\|VEA01072.1\|964914_965868_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	unknown	unknown	gnl\|CDD\|185277

Protein	Function_ID	Function_description	E-value
LR134141.1\|VEA01064.1\|953630_955268_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LR134141.1\|VEA01071.1\|964092_964827_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.45521e-136
LR134141.1\|VEA01063.1\|952902_953403_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	4.04503e-80
LR134141.1\|VEA01057.1\|946140_948897_-\|BarA-sensory-histidine-kinase-(VarS-/-GacS)	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
LR134141.1\|VEA01068.1\|959683_960046_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
LR134141.1\|VEA01074.1\|967562_967997_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.55678e-22
LR134141.1\|VEA01061.1\|951891_952536_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	1.16654e-157
LR134141.1\|VEA01075.1\|968223_968976_+\|CRISPR-associated-helicase-Cas3-protein	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.36728e-43
LR134141.1\|VEA01073.1\|966721_967465_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.46052e-52
LR134141.1\|VEA01059.1\|950301_950673_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	8.76633e-64
LR134141.1\|VEA01070.1\|962271_963984_+\|sulfite-reductase-subunit-beta	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LR134141.1\|VEA01069.1\|960472_962272_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
LR134141.1\|VEA01066.1\|956787_957459_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
LR134141.1\|VEA01058.1\|948954_950250_+\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LR134141.1\|VEA01062.1\|952610_952931_+\|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.80788e-71
LR134141.1\|VEA01065.1\|955350_956649_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LR134141.1\|VEA01076.1\|969087_970545_+\|CRISPR-associated-protein-CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	7.82994e-173
LR134141.1\|VEA01060.1\|950638_951940_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LR134141.1\|VEA01067.1\|958796_959594_+\|beta-lactamase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.83585e-99
LR134141.1\|VEA01072.1\|964914_965868_-\|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0

>LR134141.1|VEA01066.1|956787_957459_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>LR134141.1|VEA01065.1|955350_956649_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LR134141.1|VEA01064.1|953630_955268_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>LR134141.1|VEA01063.1|952902_953403_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MFFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>LR134141.1|VEA01062.1|952610_952931_+|Nucleoside-triphosphate-pyrophospho-hydrolase-MazG
MNQIDRLLNIMQRLRDPEGGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFWRAFRG
>LR134141.1|VEA01061.1|951891_952536_+|GTP-pyrophosphokinase
MPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGN
>LR134141.1|VEA01060.1|950638_951940_+|GTP-pyrophosphokinase
MAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGHLRAEMKNEGVMAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAENICCRATTLMSWKSCWRR
>LR134141.1|VEA01059.1|950301_950673_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTPDSWRARYGGDPPVKCHS
>LR134141.1|VEA01058.1|948954_950250_+|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQSWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>LR134141.1|VEA01057.1|946140_948897_-|BarA-sensory-histidine-kinase-(VarS-/-GacS)
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESVIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHAEPLLMDASKIAMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>LR134141.1|VEA01067.1|958796_959594_+|beta-lactamase
MALTIRVLLENHKGAGADKSLRARPGLSLLVQDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFFGITRRIKKLSREVDYSRYRMVYTRDPLLIGENFIWSGEIPVVAPETYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPLTLWRVRRFLQEQKTEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>LR134141.1|VEA01068.1|959683_960046_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>LR134141.1|VEA01069.1|960472_962272_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTLAPEGKMTGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPTLNDTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAVNEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEALQWHCELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPAQLDADALVGLLRPLTPRLYSIASSQAEVENEVHLTVGVVRYDIEGRARAGGASSFLADRIEDDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAEDAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>LR134141.1|VEA01070.1|962271_963984_+|sulfite-reductase-subunit-beta
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTSQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGRLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWYLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIVASVPESQKAKIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEAVMAKHGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>LR134141.1|VEA01071.1|964092_964827_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNVLNGLPKVDRILALAEANAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWDHGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LR134141.1|VEA01072.1|964914_965868_-|secreted-protein-in-the-Sop-family;-transferred-to-eukaryotic-cells
MPVTLSFGNHHNYTLNESRLAHLLSADKEKAIHMGKWDKVQEHFRAEKKDHALDVLYAIIHGQGRGETGEMEVNVEDMGKIYAFKRLQNLACPAHQDLFNIKMDASQTEFLFMVGDTVISQSKIQDILNISDNAMIASMSREERQLFLRICEMIGATMTWHPELLQGSVSTLRKEVTSNAQIKAAVYEMMRPAEAPDHQFIEWRDTLTENEKSMLACINAGNFDAITQFCKIGYREVQGEVAFSMVHPCLSYLLHTYSPLAEFKETNAGFLNKLNQDYNDYHANKMFIDVILENIYLMHERTLHIGKNGCSRNILLA
>LR134141.1|VEA01073.1|966721_967465_+|helicase
MALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIAQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSATNVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANAWLALYQPDSRPSLILAHSARRLMDRFQSVNLVGHSFWYGRTR
>LR134141.1|VEA01074.1|967562_967997_+|helicase
MMAVMPFKYNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQATQTELISQRVDTRKEVERSVDIGWLHSEVSCLERIGEAVEKRKLYRLDT
>LR134141.1|VEA01075.1|968223_968976_+|CRISPR-associated-helicase-Cas3-protein
MISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDEREPPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGAIRMPQSARLLIESVYGEDVDMPVGFAKTEQLQEGKFYCDRAFASQMLLNFAPGYCAEISDFLPEKLSTRLAEESITLWLAKVMDNVVTPYAPGEHPWEMSVLRVRKSWWEKHNGEFERLKGESFQQWCVEQHQNKEFAIVIVVTDSAACGYSATEGLTGKMEA
>LR134141.1|VEA01076.1|969087_970545_+|CRISPR-associated-protein-CasA
MVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADELHKALAPLEHAFQFGPESPSFMQDFEPLTGEKVSIASLLPERPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPMTTLIELQAYQGERQTPLWRKLWLNVMPQDAADLPLPATYDASVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFSTTQPGTCDICGADSDGLLSVMTVKNYGVNYDGWRHPLTPYRLPVKEGSGFFSVKPQPGGLIWRDWLGLSQENHTEANKEYPALVVNVFNARRLKDVKAGLWGFGADFDNMKIRCWYEHHFPLLMTEGLNPDLRKATQTAIRLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRRYFDDRVFTNPYESSDLKRIMTARKKYFTTSAEKQSAKAAKAKKQEAAE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: LR134141_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134141_3

974852-975677

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAAC	PILER-CR

13 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LR134141_3

>merge|LR134141|3|974852-975677|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGGATAAACCGTTGTTCATTGTTTGCTCCATAGCCCCGGCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGAAATCGCAGCAAAACGCAGCGATACTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCACTTCATGAACCGCGATACAGCGATTCACCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTTGCCGCTCTGCCACTGACCCGGTCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCACAGTGTCAGTAAGGAAGCGTGGGAAGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACAATTTCAACGGGTAGCACGGTTGATCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGCGAGCCAGTGAGTAATCGTGAAATCGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTTAAAAACATTTGTTAACTTTTAATATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCTGCCAATATCCGGCAGGCACGCGCTATGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGCCGTCTGCATTGATCGCAGCTTTAGCGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCAGGCGTTTGAGAGCATCTACCCGTCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCAGCGCGTCTAAAAAATGCGCCGTATTCACCTCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGATGCCAAGCTCGTTCGCCTTGCTTGATGACCACGTGTTCCCCGCGCCAGCGGGGATAAACGTT

>LR134141|3|3|974852-975677|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGGATAAACCG	TTGTTCATTGTTTGCTCCATAGCCCCGGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	CTGAAATCGCAGCAAAACGCAGCGATACTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	ACTTCATGAACCGCGATACAGCGATTCACCG
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	GTTTTGCCGCTCTGCCACTGACCCGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	GCACAGTGTCAGTAAGGAAGCGTGGGAAGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCGT	GACAATTTCAACGGGTAGCACGGTTGATCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCGT	TCGCGAGCCAGTGAGTAATCGTGAAATCGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	GTTTTAAAAACATTTGTTAACTTTTAATATT
GTGTTCCCCGCGCCAGCGGGGATAAACCGC	GGCTGCCAATATCCGGCAGGCACGCGCTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCGT	CGCCGTCTGCATTGATCGCAGCTTTAGCGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCGT	GGCAGGCGTTTGAGAGCATCTACCCGTCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCAG	CGCGTCTAAAAAATGCGCCGTATTCACCTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCGA	TGCCAAGCTCGTTCGCCTTGCTTGATGACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACGTT

>LR134141|3|2|974852-975676|CRT
GTGTTCCCCGCGCCAGCGGGGGATAAACC	GTTGTTCATTGTTTGCTCCATAGCCCCGGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGAAATCGCAGCAAAACGCAGCGATACTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTTCATGAACCGCGATACAGCGATTCACCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTGCCGCTCTGCCACTGACCCGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCACAGTGTCAGTAAGGAAGCGTGGGAAGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACAATTTCAACGGGTAGCACGGTTGATCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGCGAGCCAGTGAGTAATCGTGAAATCGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTAAAAACATTTGTTAACTTTTAATATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCTGCCAATATCCGGCAGGCACGCGCTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCCGTCTGCATTGATCGCAGCTTTAGCGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCAGGCGTTTGAGAGCATCTACCCGTCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCGCGTCTAAAAAATGCGCCGTATTCACCTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCAAGCTCGTTCGCCTTGCTTGATGACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACGT

>LR134141|3|2|974914-975674|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCCTGAAATCGCAGCAAAACGCAGCGATACTGT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCACTTCATGAACCGCGATACAGCGATTCACCG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCGTTTTGCCGCTCTGCCACTGACCCGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCGCACAGTGTCAGTAAGGAAGCGTGGGAAGTC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGACAATTTCAACGGGTAGCACGGTTGATCTG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTTCGCGAGCCAGTGAGTAATCGTGAAATCGAG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCGTTTTAAAAACATTTGTTAACTTTTAATATT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCGGCTGCCAATATCCGGCAGGCACGCGCTATG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTCGCCGTCTGCATTGATCGCAGCTTTAGCGAG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGGCAGGCGTTTGAGAGCATCTACCCGTCGCT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CAGCGCGTCTAAAAAATGCGCCGTATTCACCTCCT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGATGCCAAGCTCGTTCGCCTTGCTTGATGACCAC
GTGTTCCCCGCGCCAGCGGGGATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134141.1\|VEA01092.1\|980499_980769_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	unknown	unknown	gnl\|CDD\|179156
LR134141.1\|VEA01078.1\|971097_972156_+\|CRISPR-associated-protein-Cse4	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
LR134141.1\|VEA01076.1\|969087_970545_+\|CRISPR-associated-protein-CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LR134141.1\|VEA01080.1\|972894_973113_+\|CRISPR-associated-protein-Cse3-family	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
LR134141.1\|VEA01084.1\|975690_976737_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
LR134141.1\|VEA01090.1\|979986_980178_+\|Inner-membrane-protein-ygbE	unknown	unknown	gnl\|CDD\|371891
LR134141.1\|VEA01079.1\|972166_972913_+\|CRISPR-associated-protein-Cas5e-family	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
LR134141.1\|VEA01075.1\|968223_968976_+\|CRISPR-associated-helicase-Cas3-protein	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LR134141.1\|VEA01083.1\|974463_974757_+\|ssRNA-endonuclease	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
LR134141.1\|VEA01074.1\|967562_967997_+\|helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LR134141.1\|VEA01077.1\|970541_971084_+\|CRISPR-associated-protein-Cse2-family	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
LR134141.1\|VEA01085.1\|977199_977895_+\|Sulfate-adenylyltransferase-subunit-2-1	unknown	unknown	gnl\|CDD\|235375
LR134141.1\|VEA01093.1\|980830_981541_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LR134141.1\|VEA01091.1\|980177_980309_+\|membrane-protein	unknown	unknown	gnl\|CDD\|371891
LR134141.1\|VEA01089.1\|979648_979855_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134141.1\|VEA01088.1\|979329_979749_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LR134141.1\|VEA01082.1\|973591_974464_+\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LR134141.1\|VEA01081.1\|973069_973546_+\|CRISPR-associated-protein-Cse3-family	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187858
LR134141.1\|VEA01086.1\|977904_978072_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349
LR134141.1\|VEA01087.1\|978272_979343_+\|ATP-sulfurylase	unknown	unknown	gnl\|CDD\|235349

Protein	Function_ID	Function_description	E-value
LR134141.1\|VEA01092.1\|980499_980769_+\|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	9.86056e-53
LR134141.1\|VEA01078.1\|971097_972156_+\|CRISPR-associated-protein-Cse4	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.93386e-131
LR134141.1\|VEA01076.1\|969087_970545_+\|CRISPR-associated-protein-CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	7.82994e-173
LR134141.1\|VEA01080.1\|972894_973113_+\|CRISPR-associated-protein-Cse3-family	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.40998e-19
LR134141.1\|VEA01084.1\|975690_976737_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LR134141.1\|VEA01090.1\|979986_980178_+\|Inner-membrane-protein-ygbE	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	7.43651e-24
LR134141.1\|VEA01079.1\|972166_972913_+\|CRISPR-associated-protein-Cas5e-family	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.46993e-48
LR134141.1\|VEA01075.1\|968223_968976_+\|CRISPR-associated-helicase-Cas3-protein	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.36728e-43
LR134141.1\|VEA01083.1\|974463_974757_+\|ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.50272e-63
LR134141.1\|VEA01074.1\|967562_967997_+\|helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.55678e-22
LR134141.1\|VEA01077.1\|970541_971084_+\|CRISPR-associated-protein-Cse2-family	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.03999e-27
LR134141.1\|VEA01085.1\|977199_977895_+\|Sulfate-adenylyltransferase-subunit-2-1	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	1.9661e-168
LR134141.1\|VEA01093.1\|980830_981541_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	5.05596e-118
LR134141.1\|VEA01091.1\|980177_980309_+\|membrane-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.25987e-11
LR134141.1\|VEA01088.1\|979329_979749_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.54708e-83
LR134141.1\|VEA01082.1\|973591_974464_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.4513e-152
LR134141.1\|VEA01081.1\|973069_973546_+\|CRISPR-associated-protein-Cse3-family	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.12781e-52
LR134141.1\|VEA01086.1\|977904_978072_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	4.91874e-36
LR134141.1\|VEA01087.1\|978272_979343_+\|ATP-sulfurylase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0

>LR134141.1|VEA01083.1|974463_974757_+|ssRNA-endonuclease
MSMVVVVTENVPPRLRGRLAIWLLEIRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPLENQ
>LR134141.1|VEA01082.1|973591_974464_+|CRISPR-associated-protein-Cas1
MIFLQYGQIDVLDGAFVLINKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSIEQLRGIEGSRVRATYALLAKQYGVKWNGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>LR134141.1|VEA01081.1|973069_973546_+|CRISPR-associated-protein-Cse3-family
MSSPQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALAWLARQGEQNGFTLRETSVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDSE
>LR134141.1|VEA01080.1|972894_973113_+|CRISPR-associated-protein-Cse3-family
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWNLFPGGKERQFLYRREELQGAFRFFVLSAGTACRQRDF
>LR134141.1|VEA01079.1|972166_972913_+|CRISPR-associated-protein-Cas5e-family
MSQYLVFQLHGPMASWGVDAPGEVRHSHNLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELRDPELQSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>LR134141.1|VEA01078.1|971097_972156_+|CRISPR-associated-protein-Cse4
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKEDLTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>LR134141.1|VEA01077.1|970541_971084_+|CRISPR-associated-protein-Cse2-family
MSIVKDDHKATLRQWHEELQEKRGARASLRRSVTVNDVCLSEGFRSLLMQTHTLWKIEGQEWRFTALALTAALVAHVKSIDERQKFAAQLNNVMSELRFSRLCAVKTPDELLRQLRRAVKLLNGAVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDTDNDNEKD
>LR134141.1|VEA01076.1|969087_970545_+|CRISPR-associated-protein-CasA
MVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADELHKALAPLEHAFQFGPESPSFMQDFEPLTGEKVSIASLLPERPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPMTTLIELQAYQGERQTPLWRKLWLNVMPQDAADLPLPATYDASVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFSTTQPGTCDICGADSDGLLSVMTVKNYGVNYDGWRHPLTPYRLPVKEGSGFFSVKPQPGGLIWRDWLGLSQENHTEANKEYPALVVNVFNARRLKDVKAGLWGFGADFDNMKIRCWYEHHFPLLMTEGLNPDLRKATQTAIRLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRRYFDDRVFTNPYESSDLKRIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>LR134141.1|VEA01075.1|968223_968976_+|CRISPR-associated-helicase-Cas3-protein
MISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDEREPPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGAIRMPQSARLLIESVYGEDVDMPVGFAKTEQLQEGKFYCDRAFASQMLLNFAPGYCAEISDFLPEKLSTRLAEESITLWLAKVMDNVVTPYAPGEHPWEMSVLRVRKSWWEKHNGEFERLKGESFQQWCVEQHQNKEFAIVIVVTDSAACGYSATEGLTGKMEA
>LR134141.1|VEA01074.1|967562_967997_+|helicase
MMAVMPFKYNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQATQTELISQRVDTRKEVERSVDIGWLHSEVSCLERIGEAVEKRKLYRLDT
>LR134141.1|VEA01084.1|975690_976737_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSATRRFTVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQILIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKPGAEDLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWSLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>LR134141.1|VEA01085.1|977199_977895_+|Sulfate-adenylyltransferase-subunit-2-1
MYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>LR134141.1|VEA01086.1|977904_978072_+|ATP-sulfurylase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIY
>LR134141.1|VEA01087.1|978272_979343_+|ATP-sulfurylase
MATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLLGDLDIRFVPLSALEGDNIAAQSANMRWYSGPTLLEVLETVDIQRAVDHQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEKAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVREPVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>LR134141.1|VEA01088.1|979329_979749_+|adenosine-5-phosphosulfate-kinase
MALHNENVVWHAHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHPRRAATGTRARRPRAFYRDLCRYAAGYL
>LR134141.1|VEA01089.1|979648_979855_-|Uncharacterised-protein
MNLGRVRRFVNGVDAGKVTQLARARFFIQPFRIALFTDSQRRIDINLDKTLVADALLYQLPLGAGAEK
>LR134141.1|VEA01090.1|979986_980178_+|Inner-membrane-protein-ygbE
MRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFVSWLLALGIPFLLYGPNTLFFSSIPGPFSSR
>LR134141.1|VEA01091.1|980177_980309_+|membrane-protein
MPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>LR134141.1|VEA01092.1|980499_980769_+|Cell-division-protein-DivIC-(FtsB)-stabilizesFtsL-against-RasP-cleavage
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGRNLLSFGA
>LR134141.1|VEA01093.1|980830_981541_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISSGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKAVIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: LR134141_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134141_4

2079820-2081680

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGAGAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CRT

30 spacers

The CRISPR arrays of LR134141_4

>merge|LR134141|4|2079820-2081680|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCGGCTCAAAAATCAGTTACAGACAATACTAACGCGTGTTCCCCGCGAGAGCGGGGATAAACCGTCTTTGACGCTGGCAATCGCCACGTTGTAGAGGTGTTCCCCGCGAGAGCGGGGATAAACCGCTGCATACTCCAGCAATTGTGCGGCGGCGTTCGTGTTCCCCGCGAGAGCGGGGATAAACCGGCCCAGGTCATTTTTAATGAGGAATGGATAGTGTGTTCCCCGCGAGAGCGGGGATAAACCGATCCGCTGAAATCCCGGTGGATAACATACCGAGTGTTCCCCGCGAGAGCGGGGATAAACCGAGCTGCGGGACGTTGAAAAGGACGGCTGCGGCGTGTTCCCCGCGAGAGCGGGGATAAACCGCCAGTTCTTGGCCTCGTAAATATCGCCCTGTTGTGTTCCCCGCGAGAGCGGGGATAAACCGCCAGATACCGCGATCTGTGCGAAAGCGTTTATGTGTTCCCCGCGAGAGCGGGGATAAACCGTAACTTTGTGTCGCTGCATACGGCAAAGAGTAGTGTTCCCCGCGAGAGCGGGGATAAACCGTTGACGTAGTTAGCGTGGATGATGTCGGTTATGTGTTCCCCGCGAGAGCGGGGATAAACCGGGGCGACCTCCGTTAAATTATTTATTTGAAGCGTGTTCCCCGCGAGAGCGGGGATAAACCGGCTTTGGCCTACATTCACTGCAAAACTTTGCTGTGTTCCCCGCGAGAGCGGGGATAAACCGAAACAACGCTGTCCCAGATGCCGATGACGGATGTGTTCCCCGCGAGAGCGGGGATAAACCGTTCATCCATACGCTCACTGAATCCACGCTCCCGTGTTCCCCGCGAGAGCGGGGATAAACCGCTACATTTGGGGGCTATCTATTCACACTCTGTGTGTTCCCCGCGAGAGCGGGGATAAACCGGAAAAACCGGATGTACAGGACGGGCTTGCTGCGTGTTCCCCGCGAGAGCGGGGATAAACCGCGGCTGGTTAGACGTTATCCGGGTTCAAATCCGTGTTCCCCGCGAGAGCGGGGGATAAACCGCTGTTATCATTGTTATTATCACTGATTTTATTGTGTTCCCCGCGAGAGCGGGGATAAACCGCGATCAAGATGGATAAGCGCCTCTTCGCGGGTGTGTTCCCCGCGAGAGCGGGGATAAACTGCCGAAATTGCTCAGAAAGTTTCCACCGCAGTAGTGTTCCCCGCGAGAGCGGGGATAAACCGGCCACGACGCCTGACCCCATCGGGACAGACTTGTGTTCCCCGTGAGAGCGGGGATAAACCGCGACCTGTTCCGGAAATACCGCGCCCGCCGTGGTGTTCCCCGCGAGAGCGGGGATAAACCGCGACGCTTCCATCGTCTGACAGGCCTGCTCGTGTGTTCCCCGCGAGAGCGGGGATAAACCGTTGCTCATTGGGCTCCCCCCCTCAAACAAAACCGTGTTCCCCGCGAGAGCGGGGATAAACCGTTGTAGCCTTTCCAGTTGAGTTTGCATTGTTCGTGTTCCCCGCGAGAGCGGGGATAAACCGTAATGCTGGCCACGACAGCGCAGCAGATTACAGTGTTCCCCTCGAGAGCGGGGATAAACCGCAGTGAAACGCGCTGTCGCGTATGTTGGGTTCGTGTTCCCCGCGAGAGCGGGGATAAACCGGCCGCATCAACGCCAAACGGTTTAAATCCTCCGTGTTCCCCGCGAGAGCGGGGATAAACCGATACTGCGCGTTTCTGTAGCGCCGTAATTCAGGTGTTCCCCGCGAGAGCGGGGATAAACCGGTCAGGAGGTGATTCACTTGGTACTGGCTGATGTGTTCCCCGCGCGAGCGCTGAGTTTGTG

>LR134141|4|3|2079820-2081619|PILER-CR
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCTCAAAAATCAGTTACAGACAATACTAACGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCTTTGACGCTGGCAATCGCCACGTTGTAGAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTGCATACTCCAGCAATTGTGCGGCGGCGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCCAGGTCATTTTTAATGAGGAATGGATAGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATCCGCTGAAATCCCGGTGGATAACATACCGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGCTGCGGGACGTTGAAAAGGACGGCTGCGGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCAGTTCTTGGCCTCGTAAATATCGCCCTGTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCAGATACCGCGATCTGTGCGAAAGCGTTTAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAACTTTGTGTCGCTGCATACGGCAAAGAGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGACGTAGTTAGCGTGGATGATGTCGGTTAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGGCGACCTCCGTTAAATTATTTATTTGAAGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCTTTGGCCTACATTCACTGCAAAACTTTGCT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAACAACGCTGTCCCAGATGCCGATGACGGAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTCATCCATACGCTCACTGAATCCACGCTCCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTACATTTGGGGGCTATCTATTCACACTCTGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GAAAAACCGGATGTACAGGACGGGCTTGCTGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGGCTGGTTAGACGTTATCCGGGTTCAAATCC
GTGTTCCCCGCGAGAGCGGGGGATAAACC	GCTGTTATCATTGTTATTATCACTGATTTTATTGTGTTCCC
CGCGAGAGCGGGGATAAACCGCGATCAAG	ATGGATAAGCGCCTCTTCGCGGGTGTGTTCCC
CGCGAGAGCGGGGATAAACTGCCGAAATT	GCTCAGAAAGTTTCCACCGCAGTAGTGTTCCC
CGCGAGAGCGGGGATAAACCGGCCACGAC	GCCTGACCCCATCGGGACAGACTTGTGTTCCC
CGTGAGAGCGGGGATAAACCGCGACCTGT	TCCGGAAATACCGCGCCCGCCGTGGTGTTCCC
CGCGAGAGCGGGGATAAACCGCGACGCTT	CCATCGTCTGACAGGCCTGCTCGTGTGTTCCC
CGCGAGAGCGGGGATAAACCGTTGCTCAT	TGGGCTCCCCCCCTCAAACAAAACCGTGTTCCC
CGCGAGAGCGGGGATAAACCGTTGTAGCC	TTTCCAGTTGAGTTTGCATTGTTCGTGTTCCC
CGCGAGAGCGGGGATAAACCGTAATGCTG	GCCACGACAGCGCAGCAGATTACAGTGTTCCC
CTCGAGAGCGGGGATAAACCGCAGTGAAA	CGCGCTGTCGCGTATGTTGGGTTCGTGTTCCC
CGCGAGAGCGGGGATAAACCGGCCGCATC	AACGCCAAACGGTTTAAATCCTCCGTGTTCCC
CGCGAGAGCGGGGATAAACCGATACTGCG	CGTTTCTGTAGCGCCGTAATTCAGGTGTTCCC
CGCGAGAGCGGGGATAAACCG

>LR134141|4|4|2079820-2081680|CRISPRCasFinder
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCTCAAAAATCAGTTACAGACAATACTAACGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCTTTGACGCTGGCAATCGCCACGTTGTAGAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTGCATACTCCAGCAATTGTGCGGCGGCGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCCAGGTCATTTTTAATGAGGAATGGATAGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATCCGCTGAAATCCCGGTGGATAACATACCGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGCTGCGGGACGTTGAAAAGGACGGCTGCGGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCAGTTCTTGGCCTCGTAAATATCGCCCTGTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCAGATACCGCGATCTGTGCGAAAGCGTTTAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAACTTTGTGTCGCTGCATACGGCAAAGAGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGACGTAGTTAGCGTGGATGATGTCGGTTAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGGCGACCTCCGTTAAATTATTTATTTGAAGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCTTTGGCCTACATTCACTGCAAAACTTTGCT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAACAACGCTGTCCCAGATGCCGATGACGGAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTCATCCATACGCTCACTGAATCCACGCTCCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTACATTTGGGGGCTATCTATTCACACTCTGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GAAAAACCGGATGTACAGGACGGGCTTGCTGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGGCTGGTTAGACGTTATCCGGGTTCAAATCC
GTGTTCCCCGCGAGAGCGGGGGATAAACC	GCTGTTATCATTGTTATTATCACTGATTTTATT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGATCAAGATGGATAAGCGCCTCTTCGCGGGT
GTGTTCCCCGCGAGAGCGGGGATAAACTG	CCGAAATTGCTCAGAAAGTTTCCACCGCAGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCACGACGCCTGACCCCATCGGGACAGACTT
GTGTTCCCCGTGAGAGCGGGGATAAACCG	CGACCTGTTCCGGAAATACCGCGCCCGCCGTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGACGCTTCCATCGTCTGACAGGCCTGCTCGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGCTCATTGGGCTCCCCCCCTCAAACAAAACC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGTAGCCTTTCCAGTTGAGTTTGCATTGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAATGCTGGCCACGACAGCGCAGCAGATTACA
GTGTTCCCCTCGAGAGCGGGGATAAACCG	CAGTGAAACGCGCTGTCGCGTATGTTGGGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCGCATCAACGCCAAACGGTTTAAATCCTCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATACTGCGCGTTTCTGTAGCGCCGTAATTCAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCAGGAGGTGATTCACTTGGTACTGGCTGAT
GTGTTCCCCGCGCGAGCGCTGAGTTTGTG

>LR134141|4|3|2079820-2081680|CRT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCTCAAAAATCAGTTACAGACAATACTAACGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TCTTTGACGCTGGCAATCGCCACGTTGTAGAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTGCATACTCCAGCAATTGTGCGGCGGCGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCCAGGTCATTTTTAATGAGGAATGGATAGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATCCGCTGAAATCCCGGTGGATAACATACCGA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AGCTGCGGGACGTTGAAAAGGACGGCTGCGGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCAGTTCTTGGCCTCGTAAATATCGCCCTGTT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CCAGATACCGCGATCTGTGCGAAAGCGTTTAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAACTTTGTGTCGCTGCATACGGCAAAGAGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGACGTAGTTAGCGTGGATGATGTCGGTTAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GGGCGACCTCCGTTAAATTATTTATTTGAAGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCTTTGGCCTACATTCACTGCAAAACTTTGCT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	AAACAACGCTGTCCCAGATGCCGATGACGGAT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTCATCCATACGCTCACTGAATCCACGCTCCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CTACATTTGGGGGCTATCTATTCACACTCTGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GAAAAACCGGATGTACAGGACGGGCTTGCTGC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGGCTGGTTAGACGTTATCCGGGTTCAAATCC
GTGTTCCCCGCGAGAGCGGGGGATAAACC	GCTGTTATCATTGTTATTATCACTGATTTTATT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGATCAAGATGGATAAGCGCCTCTTCGCGGGT
GTGTTCCCCGCGAGAGCGGGGATAAACTG	CCGAAATTGCTCAGAAAGTTTCCACCGCAGTA
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCACGACGCCTGACCCCATCGGGACAGACTT
GTGTTCCCCGTGAGAGCGGGGATAAACCG	CGACCTGTTCCGGAAATACCGCGCCCGCCGTG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	CGACGCTTCCATCGTCTGACAGGCCTGCTCGT
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGCTCATTGGGCTCCCCCCCTCAAACAAAACC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TTGTAGCCTTTCCAGTTGAGTTTGCATTGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	TAATGCTGGCCACGACAGCGCAGCAGATTACA
GTGTTCCCCTCGAGAGCGGGGATAAACCG	CAGTGAAACGCGCTGTCGCGTATGTTGGGTTC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GCCGCATCAACGCCAAACGGTTTAAATCCTCC
GTGTTCCCCGCGAGAGCGGGGATAAACCG	ATACTGCGCGTTTCTGTAGCGCCGTAATTCAG
GTGTTCCCCGCGAGAGCGGGGATAAACCG	GTCAGGAGGTGATTCACTTGGTACTGGCTGAT
GTGTTCCCCGCGCGAGCGCTGAGTTTGTG

Protein	Signature genes	Signature genes Name	Protein_function
LR134141.1\|VEA02639.1\|2066804_2068184_+\|invasin	unknown	unknown	gnl\|CDD\|236661
LR134141.1\|VEA02645.1\|2069527_2070628_-\|Nitrate/nitrite-sensor-protein	unknown	unknown	gnl\|CDD\|182581
LR134141.1\|VEA02667.1\|2084032_2084929_+\|phospholipase,-patatin-family	unknown	unknown	gnl\|CDD\|182352
LR134141.1\|VEA02653.1\|2078022_2078733_+\|respiratory-nitrate-reductase-1-subunit-delta	unknown	unknown	gnl\|CDD\|185014
LR134141.1\|VEA02669.1\|2085019_2086033_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|182652
LR134141.1\|VEA02681.1\|2089167_2091846_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
LR134141.1\|VEA02655.1\|2078732_2079410_+\|respiratory-nitrate-reductase-1-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
LR134141.1\|VEA02663.1\|2082561_2083404_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
LR134141.1\|VEA02675.1\|2087277_2087616_-\|DNA-binding-protein-h-ns	unknown	unknown	gnl\|CDD\|182858
LR134141.1\|VEA02657.1\|2079498_2079627_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134141.1\|VEA02643.1\|2068830_2069544_-\|Nitrate/nitrite-sensor-protein	unknown	unknown	gnl\|CDD\|182581
LR134141.1\|VEA02647.1\|2070966_2072364_+\|major-facilitator-superfamily-nitrite-extrusion-protein	unknown	unknown	gnl\|CDD\|184994
LR134141.1\|VEA02651.1\|2076490_2078026_+\|respiratory-nitrate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|224063
LR134141.1\|VEA02679.1\|2088354_2088972_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
LR134141.1\|VEA02673.1\|2086300_2087146_+\|glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|184021
LR134141.1\|VEA02665.1\|2083454_2083913_-\|Protein-YchJ	unknown	unknown	gnl\|CDD\|234966
LR134141.1\|VEA02649.1\|2072750_2076494_+\|respiratory-nitrate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|162434
LR134141.1\|VEA02671.1\|2086236_2086350_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134141.1\|VEA02677.1\|2087578_2087692_-\|DNA-binding-protein-h-ns	unknown	unknown	gnl\|CDD\|182858
LR134141.1\|VEA02641.1\|2068187_2068838_-\|nitrate/nitrite-response-regulator-protein-NarL	unknown	unknown	gnl\|CDD\|182619

Protein	Function_ID	Function_description	E-value
LR134141.1\|VEA02639.1\|2066804_2068184_+\|invasin	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
LR134141.1\|VEA02645.1\|2069527_2070628_-\|Nitrate/nitrite-sensor-protein	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
LR134141.1\|VEA02667.1\|2084032_2084929_+\|phospholipase,-patatin-family	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
LR134141.1\|VEA02653.1\|2078022_2078733_+\|respiratory-nitrate-reductase-1-subunit-delta	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	4.83899e-89
LR134141.1\|VEA02669.1\|2085019_2086033_+\|regulatory-protein	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
LR134141.1\|VEA02681.1\|2089167_2091846_-\|alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
LR134141.1\|VEA02655.1\|2078732_2079410_+\|respiratory-nitrate-reductase-1-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	7.98868e-133
LR134141.1\|VEA02663.1\|2082561_2083404_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	3.88086e-177
LR134141.1\|VEA02675.1\|2087277_2087616_-\|DNA-binding-protein-h-ns	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	3.14615e-57
LR134141.1\|VEA02643.1\|2068830_2069544_-\|Nitrate/nitrite-sensor-protein	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	3.78796e-167
LR134141.1\|VEA02647.1\|2070966_2072364_+\|major-facilitator-superfamily-nitrite-extrusion-protein	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
LR134141.1\|VEA02651.1\|2076490_2078026_+\|respiratory-nitrate-reductase-1-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
LR134141.1\|VEA02679.1\|2088354_2088972_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.50577e-115
LR134141.1\|VEA02673.1\|2086300_2087146_+\|glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
LR134141.1\|VEA02665.1\|2083454_2083913_-\|Protein-YchJ	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	1.35103e-106
LR134141.1\|VEA02649.1\|2072750_2076494_+\|respiratory-nitrate-reductase-1-subunit-alpha	gnl\|CDD\|162434	TIGR01580, Respiratory_nitrate_reductase_1_alpha_chain, respiratory nitrate reductase, alpha subunit. The Nitrate reductase enzyme complex allows bacteria to use nitrate as an electron acceptor during anaerobic growth. The enzyme complex consists of a tetramer that has an alpha, beta and 2 gamma subunits. The alpha and beta subunits have catalytic activity and the gamma subunits attach the enzyme to the membrane and is a b-type cytochrome that receives electrons from the quinone pool and transfers them to the beta subunit. This model is specific for the alpha subunit for nitrate reductase I (narG) and nitrate reductase II (narZ) for gram positive and gram negative bacteria.A few thermophiles and archaea also match the model The seed members used to make the model include Nitrate reductases from Pseudomonas fluorescens (GP:11344601), E.coli (SP:P09152) and B.subtilis (SP:P42175). All seed members are experimentally characterized. Some unpublished nitrate reductases, that are shorter sequences, and probably fragments fall in between the noise and trusted cutoffs. Pfam models pfam00384 (Molybdopterin oxidoreductase) and pfam01568(Molydopterin dinucleotide binding domain) will also match the nitrate reductase, alpha subunit. [Energy metabolism, Anaerobic].	0
LR134141.1\|VEA02677.1\|2087578_2087692_-\|DNA-binding-protein-h-ns	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.62315e-13
LR134141.1\|VEA02641.1\|2068187_2068838_-\|nitrate/nitrite-response-regulator-protein-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.27802e-141

>LR134141.1|VEA02657.1|2079498_2079627_+|Uncharacterised-protein
MPVFFAFPIGLIPYLTTCRRRSLELFADDMRKILLPLDVMMY
>LR134141.1|VEA02655.1|2078732_2079410_+|respiratory-nitrate-reductase-1-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPVDVKQKMAMIAGGACGVLTLVGGILLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASEHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQLVRARH
>LR134141.1|VEA02653.1|2078022_2078733_+|respiratory-nitrate-reductase-1-subunit-delta
MIELVIVSRLLEYPDAALWQHQQELFDALASSEHLDKEDVQTLVVFLRDLTAQEILDAQASYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHGLQLDSRELPDHLPLYLEYLAQLPKNEALGGLQDIAPILALLGARLQQRESRYAVLFDLLLKLANTTIDKGKVAEKIADEVRDDTPQALDAVWEEEQVKFFADRGCNESEIAAHQRRFAGAVAPQYLNITTGGQH
>LR134141.1|VEA02651.1|2076490_2078026_+|respiratory-nitrate-reductase-1-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRALLLGKIFANPHLPGIDDYYEPFDYDYQNLHTAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFENMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIESAASTENEKDLYQRQLDVFLDPNDPAVIEQALKDGVPQSVIDAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVDSLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGKVDTRALEEMGLSEAQAQEMYRYLAIANYEDRFVVPSSHRELARDAFPEKSGCGFTFGDGCHGSDTKFNLFNSRRIDAVDVTSKTEPHA
>LR134141.1|VEA02649.1|2072750_2076494_+|respiratory-nitrate-reductase-1-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDSLGQENNPEWKTVAINSNGEMVAPNGSIGFRWGEKGKWNLEQRDGTTGAETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDNVLLHKLPVKRLQLADGSSALVTTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWAEQITGVPRAQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPPRHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGTNPLYIAREAEKAGMTPVDYTVKSLKDGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTEHGIQGLDLGKQGGVKPEEVEWVDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWDIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMTVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKADGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGRKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSETDAKDLGIEDNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>LR134141.1|VEA02647.1|2070966_2072364_+|major-facilitator-superfamily-nitrite-extrusion-protein
MSHSSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGRRWTAFSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANAAWIWVPFLAIFTLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTLPTGGVGGSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKSEGGSEERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKNKK
>LR134141.1|VEA02645.1|2069527_2070628_-|Nitrate/nitrite-sensor-protein
MFKRCFSPLTLVNQLALIVMLSTAIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLDAKDQKLLDEMEQTAFSPELTRAAERDGQQKQLKALQDYWHNELSPGLQHAQNAHVVAEDVSRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQPWKQLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEFTCQSDISCDDKGCHLCPRNVLPMINGGTTLKWRLTDSPHPIRYFAGDAALWTPSQPRSATVGGHAG
>LR134141.1|VEA02643.1|2068830_2069544_-|Nitrate/nitrite-sensor-protein
MDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFGFTVKLDYQLPPRLVPSHQAIHLLQIAREALSNTLKHSHADDVVVTVTQCGKQVKLKVQDNGCGVPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTFIPETNFTETQGDTHE
>LR134141.1|VEA02641.1|2068187_2068838_-|nitrate/nitrite-response-regulator-protein-NarL
MNNQEPATILLIDDHPMLRTGVKQLVSMAPDISVVGEASNGEQGIDLAESLDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATTDRDVTQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>LR134141.1|VEA02639.1|2066804_2068184_+|invasin
MSRIVFRSFSLSLLLLAASGTICAQAQDSFDQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDVNVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNVGVGQRWAQDGWLLGYNTFYDNLLDENLQRAGVGAEAWGEYLRLSANYYQPFAGWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQE
>LR134141.1|VEA02663.1|2082561_2083404_-|formyltetrahydrofolate-deformylase
MQSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHETLRSLVERFEIPFELVSHEGLTREEHDRKMADAIDAHQPDYVVLAKYMRVLTPDFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>LR134141.1|VEA02665.1|2083454_2083913_-|Protein-YchJ
MSQPCPCGSADEYSLCCGRIVSGERVAPDPSHLMRSRYCAFVMKDADYLIKSWHPTCNAAAFRDDIIAGFANTRWLGLTIFEHTWSEAENTGYVSFIARFSEQGKTGAIIERSRFIKENGQWYYIDGTRPQLGRNDPCPCGSGKKFKKCCGQ
>LR134141.1|VEA02667.1|2084032_2084929_+|phospholipase,-patatin-family
MKIGLALGSGAARGWSHIGVIKALKQTGIDIDIVAGCSIGSLVGAAYACNKLSALEQWVCSFRYWDVLRLMDVSWGRGGLLRGERVFNHYRDIMPVTDFDHCSKRFGAVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVEHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLLSVNVGNINEESDDSLPWHKRLKERFSSLTSRRGVSSPGAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRAHAAIAAGQLAVEKKMDELIPLVRTDV
>LR134141.1|VEA02669.1|2085019_2086033_+|regulatory-protein
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALEMMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPELGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGVHQVQISSGVPLGTLGNAYLNQLSQRCDSWQCQIWGAGGRLRLMLSAE
>LR134141.1|VEA02671.1|2086236_2086350_+|Uncharacterised-protein
MAALNSKVKKSRYPGRGIGNQDAASDQSYPERDAAAG
>LR134141.1|VEA02673.1|2086300_2087146_+|glucose-1-phosphate-uridylyltransferase
MLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGNEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGNSQIMVEPVEDVTAYGVVNCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWALLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNSLGAEFKAWLEEEMGIKK
>LR134141.1|VEA02675.1|2087277_2087616_-|DNA-binding-protein-h-ns
MKKCWEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGRGRTPAVIKKAMEEQGKQLEDFLIKE
>LR134141.1|VEA02677.1|2087578_2087692_-|DNA-binding-protein-h-ns
MSEALKILNNIRTLRAQARECTLETLEEMLGEIRSCR
>LR134141.1|VEA02679.1|2088354_2088972_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNTSLFEEIRAESARQTIHCVLVDESQFLTRQQVYQLSEVVDKLDIPVLCYGLRTDFRGELFVGSQYLLSWSDKLVELKTICFCGRKASMVLRLDQDGRPYNEGEQVVIGGNERYVSVCRKHYKDALEEGSLTAIQERHRHI
>LR134141.1|VEA02681.1|2089167_2091846_-|alcohol-dehydrogenase
MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIIEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRARFASHGGYMLQGQELKAVQNVILKNGALNAAIVGQPAYKIAELAGFSVPETTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEEAVEKAEKLVAMGGIGHTSCLYTDQDNQQDRVNYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSVVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGRDFTEGEVAAKKDVVAAPKAEKKAKKSA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LR134141_2	2.9\|958272\|33\|LR134141\|PILER-CR	958272-958304	33	LR134141.1	969294-969326	0	1.0
LR134141_2	2.23\|958273\|32\|LR134141\|CRISPRCasFinder,CRT	958273-958304	32	LR134141.1	969294-969325	0	1.0

1. spacer 2.9|958272|33|LR134141|PILER-CR matches to position: 969294-969326, mismatch: 0, identity: 1.0

actttttcgccggttaacggttcaaaatcctgc	CRISPR spacer
actttttcgccggttaacggttcaaaatcctgc	Protospacer
*********************************

2. spacer 2.23|958273|32|LR134141|CRISPRCasFinder,CRT matches to position: 969294-969325, mismatch: 0, identity: 1.0

ctttttcgccggttaacggttcaaaatcctgc	CRISPR spacer
ctttttcgccggttaacggttcaaaatcctgc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	12015-12047	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	34646-34678	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	25349-25381	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	8580-8612	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	67409-67441	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	35133-35165	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	79055-79087	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	82526-82558	0	1.0
LR134141_2	2.1\|957784\|33\|LR134141\|PILER-CR	957784-957816	33	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	67267-67299	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	12015-12046	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	34646-34677	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	25349-25380	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	67410-67441	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	35134-35165	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	8580-8611	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	79056-79087	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	82527-82558	0	1.0
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	67268-67299	0	1.0
LR134141_4	4.1\|2079849\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079849-2079880	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	21499-21530	0	1.0
LR134141_4	4.1\|2079849\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079849-2079880	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	45269-45300	0	1.0
LR134141_4	4.1\|2079849\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079849-2079880	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	38683-38714	0	1.0
LR134141_4	4.1\|2079849\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079849-2079880	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	53935-53966	0	1.0
LR134141_4	4.7\|2080215\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080215-2080246	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	12561-12592	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	CP051272	Salmonella phage SW-70, complete genome	29620-29651	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	CP051288	Salmonella phage ST-29, complete genome	4033-4064	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	CP051285	Salmonella phage ST-32, complete genome	38002-38033	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	NC_004348	Enterobacteria phage ST64T, complete genome	21508-21539	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	MW013503	Salmonella virus L cII-101, complete genome	38307-38338	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	NC_014900	Salmonella phage ST160, complete genome	21322-21353	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	21508-21539	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	21403-21434	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	AJ011579	Bacteriophage PS3 lysis genes 13, 19, 15, and packaging gene 3	525-556	0	1.0
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NC_017903	Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence	9754-9786	0	1.0
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	38306-38337	1	0.969
LR134141_4	4.8\|2080276\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080276-2080307	32	CP051278	Salmonella phage ST-87, complete genome	32070-32101	1	0.969
LR134141_4	4.17\|2080825\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080825-2080856	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	16908-16939	1	0.969
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	77381-77413	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	45105-45137	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	90360-90392	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	4383-4415	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	77239-77271	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	2043-2075	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	24674-24706	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	15377-15409	2	0.939
LR134141_2	2.3\|957906\|33\|LR134141\|PILER-CR	957906-957938	33	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	92335-92367	2	0.939
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	2043-2074	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	24674-24705	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	15377-15408	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	77382-77413	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	45106-45137	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	92335-92366	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	90361-90392	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	4384-4415	2	0.938
LR134141_2	2.17\|957907\|32\|LR134141\|CRISPRCasFinder,CRT	957907-957938	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	77240-77271	2	0.938
LR134141_4	4.16\|2080764\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080764-2080795	32	NZ_CP030792	Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211B, complete sequence	1591-1622	2	0.938
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NC_011148	Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence	14229-14261	2	0.939
LR134141_4	4.3\|2079971\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079971-2080002	32	NC_019522	Pectobacterium phage ZF40, complete genome	15655-15686	3	0.906
LR134141_3	3.13\|975616\|32\|LR134141\|CRISPRCasFinder	975616-975647	32	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	57736-57767	6	0.812
LR134141_3	3.13\|975616\|32\|LR134141\|CRISPRCasFinder	975616-975647	32	NZ_CP034814	Paracoccus sp. Arc7-R13 plasmid unnamed4, complete sequence	3159-3190	6	0.812
LR134141_3	3.26\|975615\|33\|LR134141\|CRT	975615-975647	33	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	57735-57767	6	0.818
LR134141_3	3.26\|975615\|33\|LR134141\|CRT	975615-975647	33	NZ_CP034814	Paracoccus sp. Arc7-R13 plasmid unnamed4, complete sequence	3158-3190	6	0.818
LR134141_4	4.4\|2080032\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080032-2080063	32	NZ_CP023526	Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence	253771-253802	6	0.812
LR134141_4	4.18\|2080886\|41\|LR134141\|PILER-CR	2080886-2080926	41	NC_017903	Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence	9754-9794	6	0.854
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	AF208055	Bacteriophage phi31.1 Orf238 (orf238), Orf92 (orf92), Orf78 (orf78), Orf57 (orf57), Orf245 (orf245), Orf364 (orf364), Orf269 (orf269), Orf73 (orf73), Orf139a (orf139a), Orf79 (orf79), Orf85 (orf85), Orf68 (orf68), Orf63 (orf63), Orf75 (orf75), Orf139b (orf139b), Orf118 (orf118), Orf64 (orf64), Orf120 (orf120), Orf230 (orf230), Orf80 (orf80), Orf66 (orf66), Orf61a (orf61a), and Orf61b (orf61b) genes, complete cds	3573-3605	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	AF212846	Lactococcus lactis bacteriophage ul36.1 ORF111a (ORF111a), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), ORF235 (ORF235), ORF73 (ORF73), ORF109 (ORF109), ORF79b (ORF79b), ORF174 (ORF174), ORF68c (ORF68c), ORF184 (ORF184), putative dUTPase (ORF139b), ORF118a (ORF118a), and ORF65 (ORF65) genes, complete cds; and ORF120a gene, complete sequence	3374-3406	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	DQ394809	Lactococcus phage ul36.t1k1, complete genome	8903-8935	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	DQ394807	Lactococcus phage ul36.k1t1, complete genome	8905-8937	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	AF242738	Bacteriophage phi LC3, complete genome	6786-6818	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	NC_031040	Lactococcus phage 50101, complete genome	6693-6725	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	NC_005822	Lactococcus phage phiLC3, complete genome	6786-6818	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	DQ394806	Lactococcus phage ul36.k1, complete genome	8905-8937	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	DQ394810	Lactococcus phage phismq86, complete genome	7000-7032	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	AF212847	Lactococcus lactis bacteriophage ul36.2 ORF111b (ORF111b), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), and putative replisome organizer (ORF255) genes, complete cds; and ORF241 (ORF241) gene, partial cds	3449-3481	7	0.788
LR134141_2	2.12\|958455\|33\|LR134141\|PILER-CR	958455-958487	33	KX456212	Lactococcus phage 86501, complete genome	6693-6725	7	0.788
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	AF208055	Bacteriophage phi31.1 Orf238 (orf238), Orf92 (orf92), Orf78 (orf78), Orf57 (orf57), Orf245 (orf245), Orf364 (orf364), Orf269 (orf269), Orf73 (orf73), Orf139a (orf139a), Orf79 (orf79), Orf85 (orf85), Orf68 (orf68), Orf63 (orf63), Orf75 (orf75), Orf139b (orf139b), Orf118 (orf118), Orf64 (orf64), Orf120 (orf120), Orf230 (orf230), Orf80 (orf80), Orf66 (orf66), Orf61a (orf61a), and Orf61b (orf61b) genes, complete cds	3574-3605	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	AF212846	Lactococcus lactis bacteriophage ul36.1 ORF111a (ORF111a), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), ORF235 (ORF235), ORF73 (ORF73), ORF109 (ORF109), ORF79b (ORF79b), ORF174 (ORF174), ORF68c (ORF68c), ORF184 (ORF184), putative dUTPase (ORF139b), ORF118a (ORF118a), and ORF65 (ORF65) genes, complete cds; and ORF120a gene, complete sequence	3375-3406	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	DQ394809	Lactococcus phage ul36.t1k1, complete genome	8904-8935	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	DQ394807	Lactococcus phage ul36.k1t1, complete genome	8906-8937	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	AF242738	Bacteriophage phi LC3, complete genome	6787-6818	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	NC_031040	Lactococcus phage 50101, complete genome	6694-6725	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	NC_005822	Lactococcus phage phiLC3, complete genome	6787-6818	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	DQ394806	Lactococcus phage ul36.k1, complete genome	8906-8937	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	DQ394810	Lactococcus phage phismq86, complete genome	7001-7032	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	AF212847	Lactococcus lactis bacteriophage ul36.2 ORF111b (ORF111b), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), and putative replisome organizer (ORF255) genes, complete cds; and ORF241 (ORF241) gene, partial cds	3450-3481	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	KX456212	Lactococcus phage 86501, complete genome	6694-6725	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	130930-130961	7	0.781
LR134141_2	2.26\|958456\|32\|LR134141\|CRISPRCasFinder,CRT	958456-958487	32	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	141646-141677	7	0.781
LR134141_4	4.4\|2080032\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080032-2080063	32	NC_019898	Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence	112992-113023	7	0.781
LR134141_4	4.7\|2080215\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080215-2080246	32	NC_018583	Gordonia sp. KTR9 plasmid pGKT3, complete sequence	83898-83929	7	0.781
LR134141_4	4.21\|2081078\|32\|LR134141\|PILER-CR	2081078-2081109	32	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	68623-68654	7	0.781
LR134141_4	4.33\|2081070\|32\|LR134141\|CRISPRCasFinder,CRT	2081070-2081101	32	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	68623-68654	7	0.781
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	108777-108808	8	0.75
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	16070-16101	8	0.75
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	97154-97185	8	0.75
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	111467-111498	8	0.75
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	97077-97108	8	0.75
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	6184-6215	8	0.75
LR134141_2	2.15\|957785\|32\|LR134141\|CRISPRCasFinder,CRT	957785-957816	32	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	94063-94094	8	0.75
LR134141_2	2.16\|957846\|32\|LR134141\|CRISPRCasFinder,CRT	957846-957877	32	NC_008573	Shewanella sp. ANA-3 plasmid unnamed1, complete sequence	147812-147843	8	0.75
LR134141_2	2.18\|957968\|32\|LR134141\|CRISPRCasFinder,CRT	957968-957999	32	MN693012	Marine virus AFVG_117M3, complete genome	32006-32037	8	0.75
LR134141_2	2.25\|958395\|32\|LR134141\|CRISPRCasFinder,CRT	958395-958426	32	MK250029	Prevotella phage Lak-C1, complete genome	144923-144954	8	0.75
LR134141_2	2.27\|958517\|32\|LR134141\|CRISPRCasFinder,CRT	958517-958548	32	NZ_CP035418	Leisingera sp. NJS204 plasmid unnamed1, complete sequence	62092-62123	8	0.75
LR134141_2	2.27\|958517\|32\|LR134141\|CRISPRCasFinder,CRT	958517-958548	32	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	134006-134037	8	0.75
LR134141_2	2.27\|958517\|32\|LR134141\|CRISPRCasFinder,CRT	958517-958548	32	MN693844	Marine virus AFVG_250M676, complete genome	28748-28779	8	0.75
LR134141_2	2.29\|958639\|32\|LR134141\|CRISPRCasFinder,CRT	958639-958670	32	NZ_CP022418	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence	154453-154484	8	0.75
LR134141_3	3.2\|974944\|31\|LR134141\|CRISPRCasFinder	974944-974974	31	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	413978-414008	8	0.742
LR134141_3	3.2\|974944\|31\|LR134141\|CRISPRCasFinder	974944-974974	31	NC_010393	Phage Gifsy-2, complete genome	24386-24416	8	0.742
LR134141_3	3.4\|975066\|31\|LR134141\|CRISPRCasFinder	975066-975096	31	NZ_CP053710	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence	284247-284277	8	0.742
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NC_002810	Streptococcus mutans LM7 plasmid pLM7, complete sequence	3592-3622	8	0.742
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NC_002757	Streptococcus mutans UA140 plasmid pUA140, complete sequence	2043-2073	8	0.742
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NC_019238	Streptococcus mutans plasmid pDC09, complete sequence	2042-2072	8	0.742
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NC_019239	Streptococcus mutans plasmid pNC101, complete sequence	2042-2072	8	0.742
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NC_002810	Streptococcus mutans LM7 plasmid pLM7, complete sequence	3592-3623	8	0.75
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NC_002757	Streptococcus mutans UA140 plasmid pUA140, complete sequence	2042-2073	8	0.75
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NC_019238	Streptococcus mutans plasmid pDC09, complete sequence	2041-2072	8	0.75
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NC_019239	Streptococcus mutans plasmid pNC101, complete sequence	2041-2072	8	0.75
LR134141_3	3.38\|975613\|35\|LR134141\|PILER-CR	975613-975647	35	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	57733-57767	8	0.771
LR134141_3	3.38\|975613\|35\|LR134141\|PILER-CR	975613-975647	35	NZ_CP034814	Paracoccus sp. Arc7-R13 plasmid unnamed4, complete sequence	3156-3190	8	0.771
LR134141_4	4.1\|2079849\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079849-2079880	32	MN095771	Serratia phage Muldoon, complete genome	9868-9899	8	0.75
LR134141_4	4.18\|2080886\|41\|LR134141\|PILER-CR	2080886-2080926	41	NC_011148	Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence	14221-14261	8	0.805
LR134141_4	4.22\|2081139\|32\|LR134141\|PILER-CR	2081139-2081170	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1468394-1468425	8	0.75
LR134141_4	4.26\|2081384\|32\|LR134141\|PILER-CR	2081384-2081415	32	NZ_CP026760	Klebsiella aerogenes strain AR_0062 plasmid unnamed4	18384-18415	8	0.75
LR134141_4	4.26\|2081384\|32\|LR134141\|PILER-CR	2081384-2081415	32	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	12656-12687	8	0.75
LR134141_4	4.26\|2081384\|32\|LR134141\|PILER-CR	2081384-2081415	32	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	65049-65080	8	0.75
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP035572	Lactobacillus plantarum strain SRCM103303 plasmid unnamed1	59567-59599	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP035273	Leuconostoc mesenteroides strain SRCM103453 plasmid unnamed2, complete sequence	5539-5571	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP039709	Lactobacillus paracasei strain Lp02 plasmid pLp02-2, complete sequence	10921-10953	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP033889	Lactobacillus plantarum strain LMT1-48 plasmid p_1, complete sequence	11623-11655	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP050806	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence	64367-64399	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP050808	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP458, complete sequence	1341-1373	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP028225	Lactobacillus plantarum strain SRCM101105 plasmid unnamed3, complete sequence	6193-6225	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP032754	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed3, complete sequence	20867-20899	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP021931	Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence	57400-57432	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP023302	Lactobacillus plantarum strain pc-26 plasmid p.pc-2601, complete sequence	45446-45478	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_AP014681	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-1, complete sequence	73062-73094	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP014986	Lactobacillus paracasei strain IIA plasmid unnamed1, complete sequence	39523-39555	8	0.758
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP021926	Pediococcus pentosaceus strain SRCM100194 plasmid pPP194-1, complete sequence	31063-31095	8	0.758
LR134141_4	4.34\|2081131\|32\|LR134141\|CRISPRCasFinder,CRT	2081131-2081162	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1468394-1468425	8	0.75
LR134141_4	4.38\|2081376\|32\|LR134141\|CRISPRCasFinder,CRT	2081376-2081407	32	NZ_CP026760	Klebsiella aerogenes strain AR_0062 plasmid unnamed4	18384-18415	8	0.75
LR134141_4	4.38\|2081376\|32\|LR134141\|CRISPRCasFinder,CRT	2081376-2081407	32	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	12656-12687	8	0.75
LR134141_4	4.38\|2081376\|32\|LR134141\|CRISPRCasFinder,CRT	2081376-2081407	32	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	65049-65080	8	0.75
LR134141_2	2.18\|957968\|32\|LR134141\|CRISPRCasFinder,CRT	957968-957999	32	MN180249	UNVERIFIED: Wolbachia phage WO isolate Seq2WORi_AMD2 genomic sequence	1365-1396	9	0.719
LR134141_2	2.27\|958517\|32\|LR134141\|CRISPRCasFinder,CRT	958517-958548	32	NC_011981	Agrobacterium vitis S4 plasmid pAtS4e, complete sequence	342490-342521	9	0.719
LR134141_3	3.4\|975066\|31\|LR134141\|CRISPRCasFinder	975066-975096	31	CP058906	Micromonospora phage pMLP1, complete sequence	11604-11634	9	0.71
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	268339-268369	9	0.71
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	262584-262614	9	0.71
LR134141_3	3.8\|975310\|31\|LR134141\|CRISPRCasFinder	975310-975340	31	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	541273-541303	9	0.71
LR134141_3	3.15\|974943\|32\|LR134141\|CRT	974943-974974	32	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	413978-414009	9	0.719
LR134141_3	3.15\|974943\|32\|LR134141\|CRT	974943-974974	32	NC_010393	Phage Gifsy-2, complete genome	24385-24416	9	0.719
LR134141_3	3.17\|975065\|32\|LR134141\|CRT	975065-975096	32	NZ_CP053710	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence	284247-284278	9	0.719
LR134141_3	3.17\|975065\|32\|LR134141\|CRT	975065-975096	32	CP058906	Micromonospora phage pMLP1, complete sequence	11604-11635	9	0.719
LR134141_4	4.2\|2079910\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079910-2079941	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1357726-1357757	9	0.719
LR134141_4	4.2\|2079910\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079910-2079941	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1335721-1335752	9	0.719
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	NZ_CP016593	Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence	212254-212285	9	0.719
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	NC_017386	Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence	147455-147486	9	0.719
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	NC_014621	Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence	114289-114320	9	0.719
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	NZ_CP012909	Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence	212263-212294	9	0.719
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	NC_009508	Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence	144805-144836	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	LR746310	Klebsiella phage vB_KpnM_05F genome assembly, chromosome: 1	63815-63846	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	MN101223	Klebsiella phage KOX10, complete genome	102764-102795	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	KT001919	Klebsiella phage Miro, complete genome	51267-51298	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	HQ918180	Klebsiella phage KP27, complete genome	50400-50431	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	KT001918	Klebsiella phage Matisse, complete genome	51319-51350	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	LT607758	Klebsiella phage PMBT1 genome assembly, complete genome: monopartite	51526-51557	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	KX130727	Escherichia phage phT4A, partial genome	44772-44803	9	0.719
LR134141_4	4.25\|2081323\|32\|LR134141\|PILER-CR	2081323-2081354	32	KT321315	Enterobacter phage phiEap-3, complete genome	49669-49700	9	0.719
LR134141_4	4.26\|2081384\|32\|LR134141\|PILER-CR	2081384-2081415	32	MN855955	Bacteriophage sp. isolate 57, complete genome	21804-21835	9	0.719
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	MT375529	Pelagibacter phage Kolga EXVC01, complete genome	44867-44899	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	MT375519	Pelagibacter phage Aegir EXVC01, complete genome	11359-11391	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP029750	Staphylococcus aureus strain Smith plasmid pSS41, complete sequence	722-754	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_KY436021	Staphylococcus aureus strain NRL 99/049 plasmid pETB049, complete sequence	19395-19427	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_KY436022	Staphylococcus aureus strain NRL 03/459 plasmid pETB459, complete sequence	25749-25781	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_KY436024	Staphylococcus aureus strain NRL 13/791 plasmid pETB791, complete sequence	17952-17984	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_KY436025	Staphylococcus aureus strain NRL 08/797 plasmid pETB797, complete sequence	19376-19408	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP029650	Staphylococcus aureus strain AR_0471 plasmid unnamed1, complete sequence	8767-8799	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NC_022598	Staphylococcus aureus TY825 plasmid pETB DNA, complete sequence	5512-5544	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NC_013334	Staphylococcus aureus plasmid SAP057A, complete sequence	19401-19433	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NC_003265	Staphylococcus aureus TY4 plasmid pETB, complete sequence	15924-15956	9	0.727
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	NZ_CP022683	Staphylococcus aureus strain 78 plasmid pPS00085.1A.1, complete sequence	25057-25089	9	0.727
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	LR746310	Klebsiella phage vB_KpnM_05F genome assembly, chromosome: 1	63815-63846	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	MN101223	Klebsiella phage KOX10, complete genome	102764-102795	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	KT001919	Klebsiella phage Miro, complete genome	51267-51298	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	HQ918180	Klebsiella phage KP27, complete genome	50400-50431	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	KT001918	Klebsiella phage Matisse, complete genome	51319-51350	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	LT607758	Klebsiella phage PMBT1 genome assembly, complete genome: monopartite	51526-51557	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	KX130727	Escherichia phage phT4A, partial genome	44772-44803	9	0.719
LR134141_4	4.37\|2081315\|32\|LR134141\|CRISPRCasFinder,CRT	2081315-2081346	32	KT321315	Enterobacter phage phiEap-3, complete genome	49669-49700	9	0.719
LR134141_4	4.38\|2081376\|32\|LR134141\|CRISPRCasFinder,CRT	2081376-2081407	32	MN855955	Bacteriophage sp. isolate 57, complete genome	21804-21835	9	0.719
LR134141_2	2.4\|957967\|33\|LR134141\|PILER-CR	957967-957999	33	MN180249	UNVERIFIED: Wolbachia phage WO isolate Seq2WORi_AMD2 genomic sequence	1364-1396	10	0.697
LR134141_2	2.18\|957968\|32\|LR134141\|CRISPRCasFinder,CRT	957968-957999	32	MG945729	UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome	2520-2551	10	0.688
LR134141_2	2.18\|957968\|32\|LR134141\|CRISPRCasFinder,CRT	957968-957999	32	MN693323	Marine virus AFVG_25M87, complete genome	31472-31503	10	0.688
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	541272-541303	10	0.688
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	268339-268370	10	0.688
LR134141_3	3.21\|975309\|32\|LR134141\|CRT	975309-975340	32	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	262584-262615	10	0.688
LR134141_3	3.33\|975307\|34\|LR134141\|PILER-CR	975307-975340	34	NC_002810	Streptococcus mutans LM7 plasmid pLM7, complete sequence	3592-3625	10	0.706
LR134141_3	3.33\|975307\|34\|LR134141\|PILER-CR	975307-975340	34	NC_002757	Streptococcus mutans UA140 plasmid pUA140, complete sequence	2040-2073	10	0.706
LR134141_3	3.33\|975307\|34\|LR134141\|PILER-CR	975307-975340	34	NC_019238	Streptococcus mutans plasmid pDC09, complete sequence	2039-2072	10	0.706
LR134141_3	3.33\|975307\|34\|LR134141\|PILER-CR	975307-975340	34	NC_019239	Streptococcus mutans plasmid pNC101, complete sequence	2039-2072	10	0.706
LR134141_4	4.1\|2079849\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079849-2079880	32	AP018399	Xanthomonas phage XacN1 DNA, complete genome	137189-137220	10	0.688
LR134141_4	4.2\|2079910\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079910-2079941	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1227951-1227982	10	0.688
LR134141_4	4.2\|2079910\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2079910-2079941	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1395969-1396000	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	AB050094	Bacteriophage KVP40 genes for gp16v, gp17v, complete cds	1554-1585	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	MN794232	Vibrio phage VH1_2019, complete genome	220213-220244	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	NC_005083	Vibrio phage KVP40, complete genome	217050-217081	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	JN849462	Vibriophage phi-pp2, complete genome	218756-218787	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	MT135024	Vibrio phage V05, complete genome	127564-127595	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	AY283928	Bacteriophage KVP40, complete genome	217050-217081	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	MT135026	Vibrio phage V09, complete genome	127491-127522	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	MT135025	Vibrio phage V07, complete genome	25937-25968	10	0.688
LR134141_4	4.28\|2081506\|32\|LR134141\|PILER-CR	2081506-2081537	32	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	315759-315790	10	0.688
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	MW084976	Bacillus phage Kirov, complete genome	25464-25496	10	0.697
LR134141_4	4.30\|2080886\|33\|LR134141\|CRISPRCasFinder,CRT	2080886-2080918	33	MK256395	Bacillus phage phiKir1 clone phiKir1-sq7 putative structural protein and hypothetical protein genes, partial cds	475-507	10	0.697
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	AB050094	Bacteriophage KVP40 genes for gp16v, gp17v, complete cds	1554-1585	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	MN794232	Vibrio phage VH1_2019, complete genome	220213-220244	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	NC_005083	Vibrio phage KVP40, complete genome	217050-217081	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	JN849462	Vibriophage phi-pp2, complete genome	218756-218787	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	MT135024	Vibrio phage V05, complete genome	127564-127595	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	AY283928	Bacteriophage KVP40, complete genome	217050-217081	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	MT135026	Vibrio phage V09, complete genome	127491-127522	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	MT135025	Vibrio phage V07, complete genome	25937-25968	10	0.688
LR134141_4	4.40\|2081498\|32\|LR134141\|CRISPRCasFinder,CRT	2081498-2081529	32	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	315759-315790	10	0.688
LR134141_4	4.42\|2081620\|32\|LR134141\|CRISPRCasFinder,CRT	2081620-2081651	32	MF417881	Uncultured Caudovirales phage clone 7AX_3, partial genome	10140-10171	10	0.688
LR134141_4	4.42\|2081620\|32\|LR134141\|CRISPRCasFinder,CRT	2081620-2081651	32	MF417844	Uncultured Caudovirales phage clone 8AX_10, partial genome	7152-7183	10	0.688
LR134141_4	4.42\|2081620\|32\|LR134141\|CRISPRCasFinder,CRT	2081620-2081651	32	MF417989	Uncultured Caudovirales phage clone 7F_4, partial genome	5514-5545	10	0.688
LR134141_3	3.34\|975368\|34\|LR134141\|PILER-CR	975368-975401	34	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	46957-46990	11	0.676
LR134141_3	3.34\|975368\|34\|LR134141\|PILER-CR	975368-975401	34	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	127133-127166	11	0.676
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	232962-232993	11	0.656
LR134141_4	4.13\|2080581\|32\|LR134141\|PILER-CR,CRISPRCasFinder,CRT	2080581-2080612	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	2035993-2036024	11	0.656
LR134141_4	4.22\|2081139\|32\|LR134141\|PILER-CR	2081139-2081170	32	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	360261-360292	11	0.656
LR134141_4	4.34\|2081131\|32\|LR134141\|CRISPRCasFinder,CRT	2081131-2081162	32	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	360261-360292	11	0.656

1. spacer 2.1|957784|33|LR134141|PILER-CR matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

2. spacer 2.1|957784|33|LR134141|PILER-CR matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

3. spacer 2.1|957784|33|LR134141|PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

4. spacer 2.1|957784|33|LR134141|PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

5. spacer 2.1|957784|33|LR134141|PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

6. spacer 2.1|957784|33|LR134141|PILER-CR matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

7. spacer 2.1|957784|33|LR134141|PILER-CR matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

8. spacer 2.1|957784|33|LR134141|PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

9. spacer 2.1|957784|33|LR134141|PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gggtcggatcagctgcggcggatagtccattca	Protospacer
*********************************

10. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

11. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

12. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

13. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

14. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

15. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

16. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

17. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

18. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
ggtcggatcagctgcggcggatagtccattca	Protospacer
********************************

19. spacer 4.1|2079849|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

gctcaaaaatcagttacagacaatactaacgc	CRISPR spacer
gctcaaaaatcagttacagacaatactaacgc	Protospacer
********************************

20. spacer 4.1|2079849|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gctcaaaaatcagttacagacaatactaacgc	CRISPR spacer
gctcaaaaatcagttacagacaatactaacgc	Protospacer
********************************

21. spacer 4.1|2079849|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gctcaaaaatcagttacagacaatactaacgc	CRISPR spacer
gctcaaaaatcagttacagacaatactaacgc	Protospacer
********************************

22. spacer 4.1|2079849|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gctcaaaaatcagttacagacaatactaacgc	CRISPR spacer
gctcaaaaatcagttacagacaatactaacgc	Protospacer
********************************

23. spacer 4.7|2080215|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccagttcttggcctcgtaaatatcgccctgtt	CRISPR spacer
ccagttcttggcctcgtaaatatcgccctgtt	Protospacer
********************************

24. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP051272 (Salmonella phage SW-70, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

25. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP051288 (Salmonella phage ST-29, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

26. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP051285 (Salmonella phage ST-32, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

27. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

28. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

29. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_014900 (Salmonella phage ST160, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

30. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

31. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

32. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to AJ011579 (Bacteriophage PS3 lysis genes 13, 19, 15, and packaging gene 3) position: , mismatch: 0, identity: 1.0

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcgaaagcgtttat	Protospacer
********************************

33. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NC_017903 (Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence) position: , mismatch: 0, identity: 1.0

gctgttatcattgttattatcactgattttatt	CRISPR spacer
gctgttatcattgttattatcactgattttatt	Protospacer
*********************************

34. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 1, identity: 0.969

ccagataccgcgatctgtgcgaaagcgtttat	CRISPR spacer
ccagataccgcgatctatgcgaaagcgtttat	Protospacer
****************.***************

35. spacer 4.8|2080276|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP051278 (Salmonella phage ST-87, complete genome) position: , mismatch: 1, identity: 0.969

ccagataccgcgatctgtgc-gaaagcgtttat	CRISPR spacer
ccagataccgcgatctgtgcggaaagcgttta-	Protospacer
******************** ***********

36. spacer 4.17|2080825|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

cggctggttagacgttatccgggttcaaatcc	CRISPR spacer
cggttggttagacgttatccgggttcaaatcc	Protospacer
***.****************************

37. spacer 2.3|957906|33|LR134141|PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

38. spacer 2.3|957906|33|LR134141|PILER-CR matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

39. spacer 2.3|957906|33|LR134141|PILER-CR matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

40. spacer 2.3|957906|33|LR134141|PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

41. spacer 2.3|957906|33|LR134141|PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

42. spacer 2.3|957906|33|LR134141|PILER-CR matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

43. spacer 2.3|957906|33|LR134141|PILER-CR matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

44. spacer 2.3|957906|33|LR134141|PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

45. spacer 2.3|957906|33|LR134141|PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 2, identity: 0.939

gagaactgactgtaggtagcattgttattgttc	CRISPR spacer
gagaattgactgtaggtagcgttgttattgttc	Protospacer
*****.**************.************

46. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

47. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

48. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

49. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

50. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

51. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

52. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

53. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

54. spacer 2.17|957907|32|LR134141|CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 2, identity: 0.938

agaactgactgtaggtagcattgttattgttc	CRISPR spacer
agaattgactgtaggtagcgttgttattgttc	Protospacer
****.**************.************

55. spacer 4.16|2080764|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030792 (Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211B, complete sequence) position: , mismatch: 2, identity: 0.938

gaaaaaccggatgtacaggacgggcttgctgc	CRISPR spacer
gaaaaaccggatgtacaagatgggcttgctgc	Protospacer
*****************.**.***********

56. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NC_011148 (Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence) position: , mismatch: 2, identity: 0.939

gctgttatcattgttattatcactgattttatt	CRISPR spacer
gctgttattattgttattatcactgattttgtt	Protospacer
********.*********************.**

57. spacer 4.3|2079971|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_019522 (Pectobacterium phage ZF40, complete genome) position: , mismatch: 3, identity: 0.906

ctgcatactccagcaattgtgcggcggcgttc	CRISPR spacer
ctgcatactccagcaactgagcggcggcgttt	Protospacer
****************.** ***********.

58. spacer 3.13|975616|32|LR134141|CRISPRCasFinder matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 6, identity: 0.812

tgccaagctcgttcgccttgcttgatgaccac	CRISPR spacer
tgcccagctcgttcgccttgctggatgcgcct	Protospacer
**** ***************** ****  * .

59. spacer 3.13|975616|32|LR134141|CRISPRCasFinder matches to NZ_CP034814 (Paracoccus sp. Arc7-R13 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.812

tgccaagctcgttcgccttgcttgatgaccac--	CRISPR spacer
tgccaagctcgttcgccttggtcga--actgcca	Protospacer
******************** *.**  **..*

60. spacer 3.26|975615|33|LR134141|CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 6, identity: 0.818

atgccaagctcgttcgccttgcttgatgaccac	CRISPR spacer
atgcccagctcgttcgccttgctggatgcgcct	Protospacer
***** ***************** ****  * .

61. spacer 3.26|975615|33|LR134141|CRT matches to NZ_CP034814 (Paracoccus sp. Arc7-R13 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.818

atgccaagctcgttcgccttgcttgatgaccac--	CRISPR spacer
atgccaagctcgttcgccttggtcga--actgcca	Protospacer
********************* *.**  **..*

62. spacer 4.4|2080032|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023526 (Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gcccaggtcatttttaatgaggaatggatagt	CRISPR spacer
tcacaggtcatttttaacgaggaatggatcac	Protospacer
 * **************.*********** ..

63. spacer 4.18|2080886|41|LR134141|PILER-CR matches to NC_017903 (Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence) position: , mismatch: 6, identity: 0.854

gataaaccgctgttatcattgttattatcactgattttatt	CRISPR spacer
actttaatgctgttatcattgttattatcactgattttatt	Protospacer
. *  * .*********************************

64. spacer 2.12|958455|33|LR134141|PILER-CR matches to AF208055 (Bacteriophage phi31.1 Orf238 (orf238), Orf92 (orf92), Orf78 (orf78), Orf57 (orf57), Orf245 (orf245), Orf364 (orf364), Orf269 (orf269), Orf73 (orf73), Orf139a (orf139a), Orf79 (orf79), Orf85 (orf85), Orf68 (orf68), Orf63 (orf63), Orf75 (orf75), Orf139b (orf139b), Orf118 (orf118), Orf64 (orf64), Orf120 (orf120), Orf230 (orf230), Orf80 (orf80), Orf66 (orf66), Orf61a (orf61a), and Orf61b (orf61b) genes, complete cds) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

65. spacer 2.12|958455|33|LR134141|PILER-CR matches to AF212846 (Lactococcus lactis bacteriophage ul36.1 ORF111a (ORF111a), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), ORF235 (ORF235), ORF73 (ORF73), ORF109 (ORF109), ORF79b (ORF79b), ORF174 (ORF174), ORF68c (ORF68c), ORF184 (ORF184), putative dUTPase (ORF139b), ORF118a (ORF118a), and ORF65 (ORF65) genes, complete cds; and ORF120a gene, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

66. spacer 2.12|958455|33|LR134141|PILER-CR matches to DQ394809 (Lactococcus phage ul36.t1k1, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

67. spacer 2.12|958455|33|LR134141|PILER-CR matches to DQ394807 (Lactococcus phage ul36.k1t1, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

68. spacer 2.12|958455|33|LR134141|PILER-CR matches to AF242738 (Bacteriophage phi LC3, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

69. spacer 2.12|958455|33|LR134141|PILER-CR matches to NC_031040 (Lactococcus phage 50101, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

70. spacer 2.12|958455|33|LR134141|PILER-CR matches to NC_005822 (Lactococcus phage phiLC3, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

71. spacer 2.12|958455|33|LR134141|PILER-CR matches to DQ394806 (Lactococcus phage ul36.k1, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

72. spacer 2.12|958455|33|LR134141|PILER-CR matches to DQ394810 (Lactococcus phage phismq86, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

73. spacer 2.12|958455|33|LR134141|PILER-CR matches to AF212847 (Lactococcus lactis bacteriophage ul36.2 ORF111b (ORF111b), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), and putative replisome organizer (ORF255) genes, complete cds; and ORF241 (ORF241) gene, partial cds) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

74. spacer 2.12|958455|33|LR134141|PILER-CR matches to KX456212 (Lactococcus phage 86501, complete genome) position: , mismatch: 7, identity: 0.788

gaaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
gaagtgccagtatgggaaaaaattaaaaacatt	Protospacer
***.   ****.********** ******** *

75. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to AF208055 (Bacteriophage phi31.1 Orf238 (orf238), Orf92 (orf92), Orf78 (orf78), Orf57 (orf57), Orf245 (orf245), Orf364 (orf364), Orf269 (orf269), Orf73 (orf73), Orf139a (orf139a), Orf79 (orf79), Orf85 (orf85), Orf68 (orf68), Orf63 (orf63), Orf75 (orf75), Orf139b (orf139b), Orf118 (orf118), Orf64 (orf64), Orf120 (orf120), Orf230 (orf230), Orf80 (orf80), Orf66 (orf66), Orf61a (orf61a), and Orf61b (orf61b) genes, complete cds) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

76. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to AF212846 (Lactococcus lactis bacteriophage ul36.1 ORF111a (ORF111a), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), ORF235 (ORF235), ORF73 (ORF73), ORF109 (ORF109), ORF79b (ORF79b), ORF174 (ORF174), ORF68c (ORF68c), ORF184 (ORF184), putative dUTPase (ORF139b), ORF118a (ORF118a), and ORF65 (ORF65) genes, complete cds; and ORF120a gene, complete sequence) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

77. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to DQ394809 (Lactococcus phage ul36.t1k1, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

78. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to DQ394807 (Lactococcus phage ul36.k1t1, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

79. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to AF242738 (Bacteriophage phi LC3, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

80. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to NC_031040 (Lactococcus phage 50101, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

81. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to NC_005822 (Lactococcus phage phiLC3, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

82. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to DQ394806 (Lactococcus phage ul36.k1, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

83. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to DQ394810 (Lactococcus phage phismq86, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

84. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to AF212847 (Lactococcus lactis bacteriophage ul36.2 ORF111b (ORF111b), ORF78b (ORF78b), ORF61b (ORF61b), ORF245 (ORF245), ORF364 (ORF364), and putative replisome organizer (ORF255) genes, complete cds; and ORF241 (ORF241) gene, partial cds) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

85. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to KX456212 (Lactococcus phage 86501, complete genome) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
aagtgccagtatgggaaaaaattaaaaacatt	Protospacer
**.   ****.********** ******** *

86. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
atgattaaatgtggaaaaaaagtaaaaaaaat	Protospacer
* .**  *.*****.************* ***

87. spacer 2.26|958456|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaatacagtgtgggaaaaaagtaaaaacaat	CRISPR spacer
atgattaaatgtggaaaaaaagtaaaaaaaat	Protospacer
* .**  *.*****.************* ***

88. spacer 4.4|2080032|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 7, identity: 0.781

gcccaggtcatttttaatgaggaatggatagt	CRISPR spacer
gaccaggtcattctaaatgaggaatcgccggt	Protospacer
* **********.* ********** * ..**

89. spacer 4.7|2080215|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 7, identity: 0.781

-ccagttcttggcctcgtaaatatcgccctgtt	CRISPR spacer
aatagtgc-tgacctcgtaaatgtcgccctgtc	Protospacer
  .*** * **.**********.*********.

90. spacer 4.21|2081078|32|LR134141|PILER-CR matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 7, identity: 0.781

gccacgacgcctgaccccatcgggacagactt---	CRISPR spacer
ggaacgaagcctgaccccatcaggac---cttgca	Protospacer
*  **** *************.****   ***

91. spacer 4.33|2081070|32|LR134141|CRISPRCasFinder,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 7, identity: 0.781

gccacgacgcctgaccccatcgggacagactt---	CRISPR spacer
ggaacgaagcctgaccccatcaggac---cttgca	Protospacer
*  **** *************.****   ***

92. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

93. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

94. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

95. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

96. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

97. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

98. spacer 2.15|957785|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 8, identity: 0.75

ggtcggatcagctgcggcggatagtccattca	CRISPR spacer
gtcaggatcagctccgccggatagtccttgaa	Protospacer
* . ********* ** ********** *  *

99. spacer 2.16|957846|32|LR134141|CRISPRCasFinder,CRT matches to NC_008573 (Shewanella sp. ANA-3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

attagcggcgtttaacgtcatcaggttttcaa	CRISPR spacer
aaaggtagcgtttaacgtcttctggttttcca	Protospacer
*  .*..************ ** ******* *

100. spacer 2.18|957968|32|LR134141|CRISPRCasFinder,CRT matches to MN693012 (Marine virus AFVG_117M3, complete genome) position: , mismatch: 8, identity: 0.75

ggacgtctttttatttcatctccttttctcgc	CRISPR spacer
ttatgtctttttaattcatctccttttttata	Protospacer
  *.********* *************.*

101. spacer 2.25|958395|32|LR134141|CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 8, identity: 0.75

taaacccctgtttataatctttgctcaccttt	CRISPR spacer
taaactcctgtttatattctttgtatttctgt	Protospacer
*****.********** ******. . .** *

102. spacer 2.27|958517|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP035418 (Leisingera sp. NJS204 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcgagaccgataggctggcggcgcacccg	CRISPR spacer
aggttctggccgaacggctggcggcgcacccg	Protospacer
*..*.  *.****  *****************

103. spacer 2.27|958517|32|LR134141|CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcgagaccgataggctggcggcgcacccg	CRISPR spacer
acatcgagaccgaggggctggcggcaatggcg	Protospacer
* *********** .**********.    **

104. spacer 2.27|958517|32|LR134141|CRISPRCasFinder,CRT matches to MN693844 (Marine virus AFVG_250M676, complete genome) position: , mismatch: 8, identity: 0.75

aaatcgagaccgataggctggcggcgcacccg	CRISPR spacer
acgacgagaccgataggcgtgcggcgctcgtg	Protospacer
* . **************  ******* * .*

105. spacer 2.29|958639|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022418 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence) position: , mismatch: 8, identity: 0.75

ggggcagggagccgcctcagttgtaccaggaa	CRISPR spacer
gaggcatggagccgcctcagttgaacacctga	Protospacer
*.**** **************** **    .*

106. spacer 3.2|974944|31|LR134141|CRISPRCasFinder matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ctgaaatcgcagcaaaacgcagcgatactgt	CRISPR spacer
cgaaaatcggagcaaaacgcggcgatgacgc	Protospacer
* .****** **********.*****. .*.

107. spacer 3.2|974944|31|LR134141|CRISPRCasFinder matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 8, identity: 0.742

ctgaaatcgcagcaaaacgcagcgatactgt	CRISPR spacer
atcttactgcagcaaaaggcagcgataccgt	Protospacer
 *   *..********* **********.**

108. spacer 3.4|975066|31|LR134141|CRISPRCasFinder matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

gttttgccgctctgccactgacccggtcgcc	CRISPR spacer
ttaacggcgctctgccgctgagccggtcgcg	Protospacer
 *  .* *********.**** ********

109. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NC_002810 (Streptococcus mutans LM7 plasmid pLM7, complete sequence) position: , mismatch: 8, identity: 0.742

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
gtttaaaaaacatttgttaagtttgctagat	Protospacer
**** *************** ***    . *

110. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NC_002757 (Streptococcus mutans UA140 plasmid pUA140, complete sequence) position: , mismatch: 8, identity: 0.742

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
gtttaaaaaacatttgttaagtttgctagat	Protospacer
**** *************** ***    . *

111. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NC_019238 (Streptococcus mutans plasmid pDC09, complete sequence) position: , mismatch: 8, identity: 0.742

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
gtttaaaaaacatttgttaagtttgctagat	Protospacer
**** *************** ***    . *

112. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NC_019239 (Streptococcus mutans plasmid pNC101, complete sequence) position: , mismatch: 8, identity: 0.742

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
gtttaaaaaacatttgttaagtttgctagat	Protospacer
**** *************** ***    . *

113. spacer 3.21|975309|32|LR134141|CRT matches to NC_002810 (Streptococcus mutans LM7 plasmid pLM7, complete sequence) position: , mismatch: 8, identity: 0.75

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
cgtttaaaaaacatttgttaagtttgctagat	Protospacer
***** *************** ***    . *

114. spacer 3.21|975309|32|LR134141|CRT matches to NC_002757 (Streptococcus mutans UA140 plasmid pUA140, complete sequence) position: , mismatch: 8, identity: 0.75

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
cgtttaaaaaacatttgttaagtttgctagat	Protospacer
***** *************** ***    . *

115. spacer 3.21|975309|32|LR134141|CRT matches to NC_019238 (Streptococcus mutans plasmid pDC09, complete sequence) position: , mismatch: 8, identity: 0.75

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
cgtttaaaaaacatttgttaagtttgctagat	Protospacer
***** *************** ***    . *

116. spacer 3.21|975309|32|LR134141|CRT matches to NC_019239 (Streptococcus mutans plasmid pNC101, complete sequence) position: , mismatch: 8, identity: 0.75

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
cgtttaaaaaacatttgttaagtttgctagat	Protospacer
***** *************** ***    . *

117. spacer 3.38|975613|35|LR134141|PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 8, identity: 0.771

cgatgccaagctcgttcgccttgcttgatgaccac	CRISPR spacer
gcatgcccagctcgttcgccttgctggatgcgcct	Protospacer
  ***** ***************** ****  * .

118. spacer 3.38|975613|35|LR134141|PILER-CR matches to NZ_CP034814 (Paracoccus sp. Arc7-R13 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

cgatgccaagctcgttcgccttgcttgatgaccac--	CRISPR spacer
gcatgccaagctcgttcgccttggtcga--actgcca	Protospacer
  ********************* *.**  **..*

119. spacer 4.1|2079849|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to MN095771 (Serratia phage Muldoon, complete genome) position: , mismatch: 8, identity: 0.75

gctcaaaaatcagttacagacaatactaacgc	CRISPR spacer
actcaaaaatcagttccagaaaatcaaagcgt	Protospacer
.************** **** ***   *.**.

120. spacer 4.18|2080886|41|LR134141|PILER-CR matches to NC_011148 (Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence) position: , mismatch: 8, identity: 0.805

gataaaccgctgttatcattgttattatcactgattttatt	CRISPR spacer
actttaatgctgttattattgttattatcactgattttgtt	Protospacer
. *  * .********.*********************.**

121. spacer 4.22|2081139|32|LR134141|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgacctgttccggaaataccgcgcccgccgtg	CRISPR spacer
cgacctgttccggaaatgcctcgaacaggttg	Protospacer
*****************.** **  *.   **

122. spacer 4.26|2081384|32|LR134141|PILER-CR matches to NZ_CP026760 (Klebsiella aerogenes strain AR_0062 plasmid unnamed4) position: , mismatch: 8, identity: 0.75

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
atacgctggccaccacggcgcagcagacgacg	Protospacer
  *.********* **.**********. **.

123. spacer 4.26|2081384|32|LR134141|PILER-CR matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.75

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
atacgctggccaccacggcgcagcagacgacg	Protospacer
  *.********* **.**********. **.

124. spacer 4.26|2081384|32|LR134141|PILER-CR matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.75

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
atacgctggccaccacggcgcagcagacgacg	Protospacer
  *.********* **.**********. **.

125. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP035572 (Lactobacillus plantarum strain SRCM103303 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

126. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP035273 (Leuconostoc mesenteroides strain SRCM103453 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

127. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP039709 (Lactobacillus paracasei strain Lp02 plasmid pLp02-2, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

128. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP033889 (Lactobacillus plantarum strain LMT1-48 plasmid p_1, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

129. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP050806 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

130. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP050808 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP458, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

131. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP028225 (Lactobacillus plantarum strain SRCM101105 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

132. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP032754 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

133. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP021931 (Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

134. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP023302 (Lactobacillus plantarum strain pc-26 plasmid p.pc-2601, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

135. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_AP014681 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-1, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

136. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP014986 (Lactobacillus paracasei strain IIA plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

137. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP021926 (Pediococcus pentosaceus strain SRCM100194 plasmid pPP194-1, complete sequence) position: , mismatch: 8, identity: 0.758

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ccctttatcattgttattatcaatgctttaaag	Protospacer
 *. ****************** ** *** *

138. spacer 4.34|2081131|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgacctgttccggaaataccgcgcccgccgtg	CRISPR spacer
cgacctgttccggaaatgcctcgaacaggttg	Protospacer
*****************.** **  *.   **

139. spacer 4.38|2081376|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP026760 (Klebsiella aerogenes strain AR_0062 plasmid unnamed4) position: , mismatch: 8, identity: 0.75

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
atacgctggccaccacggcgcagcagacgacg	Protospacer
  *.********* **.**********. **.

140. spacer 4.38|2081376|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.75

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
atacgctggccaccacggcgcagcagacgacg	Protospacer
  *.********* **.**********. **.

141. spacer 4.38|2081376|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP014747 (Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed) position: , mismatch: 8, identity: 0.75

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
atacgctggccaccacggcgcagcagacgacg	Protospacer
  *.********* **.**********. **.

142. spacer 2.18|957968|32|LR134141|CRISPRCasFinder,CRT matches to MN180249 (UNVERIFIED: Wolbachia phage WO isolate Seq2WORi_AMD2 genomic sequence) position: , mismatch: 9, identity: 0.719

ggacgtctttttatttcatctccttttctcgc	CRISPR spacer
tgttgtcattttctttcatctccttttcgttg	Protospacer
 * .*** **** *************** .

143. spacer 2.27|958517|32|LR134141|CRISPRCasFinder,CRT matches to NC_011981 (Agrobacterium vitis S4 plasmid pAtS4e, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgagaccgataggctggcggcgcacccg	CRISPR spacer
aggtcgggaccgattggctggcggcggatgaa	Protospacer
*..***.******* *********** *.  .

144. spacer 3.4|975066|31|LR134141|CRISPRCasFinder matches to CP058906 (Micromonospora phage pMLP1, complete sequence) position: , mismatch: 9, identity: 0.71

gttttgccgctctgccactgacccggtcgcc	CRISPR spacer
cgtgactggctcggccactgccccggtcgcc	Protospacer
  *   . **** ******* **********

145. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 9, identity: 0.71

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
caaagaaaaacattggttaagttttaatgct	Protospacer
     ********* ***** *******..*

146. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.71

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
atagagcaaacatttgtttgcttttaatata	Protospacer
.*   . *********** .**********

147. spacer 3.8|975310|31|LR134141|CRISPRCasFinder matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 9, identity: 0.71

gttttaaaaacatttgttaacttttaatatt	CRISPR spacer
caaagaaaaacattggttaagttttaatgct	Protospacer
     ********* ***** *******..*

148. spacer 3.15|974943|32|LR134141|CRT matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cctgaaatcgcagcaaaacgcagcgatactgt	CRISPR spacer
acgaaaatcggagcaaaacgcggcgatgacgc	Protospacer
 * .****** **********.*****. .*.

149. spacer 3.15|974943|32|LR134141|CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 9, identity: 0.719

cctgaaatcgcagcaaaacgcagcgatactgt	CRISPR spacer
tatcttactgcagcaaaaggcagcgataccgt	Protospacer
. *   *..********* **********.**

150. spacer 3.17|975065|32|LR134141|CRT matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgttttgccgctctgccactgacccggtcgcc	CRISPR spacer
gttaacggcgctctgccgctgagccggtcgcg	Protospacer
  *  .* *********.**** ********

151. spacer 3.17|975065|32|LR134141|CRT matches to CP058906 (Micromonospora phage pMLP1, complete sequence) position: , mismatch: 9, identity: 0.719

cgttttgcc-gctctgccactgacccggtcgcc	CRISPR spacer
-acgtgactggctcggccactgccccggtcgcc	Protospacer
 .. * .*. **** ******* **********

152. spacer 4.2|2079910|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctttgacgctggcaatcgccacgttgtagag	CRISPR spacer
atgatgacgccggcgatcgccacgttgacaag	Protospacer
 .  ******.***.************  .**

153. spacer 4.2|2079910|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.719

tctttgacgctggcaatcgccacgttgtagag	CRISPR spacer
atgatgacgccggcgatcgccacgttgacaag	Protospacer
 .  ******.***.************  .**

154. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016593 (Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
acatggcgctgaccccgatgccgatgacgatc	Protospacer
* *...***** *** *************. .

155. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_017386 (Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
acatggcgctgaccccgatgccgatgacgatc	Protospacer
* *...***** *** *************. .

156. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_014621 (Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
acatggcgctgaccccgatgccgatgacgatc	Protospacer
* *...***** *** *************. .

157. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012909 (Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
acatggcgctgaccccgatgccgatgacgatc	Protospacer
* *...***** *** *************. .

158. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NC_009508 (Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
gaaagccgctctcccagatgtcgatgacgatg	Protospacer
.** . **** *********.********.

159. spacer 4.25|2081323|32|LR134141|PILER-CR matches to LR746310 (Klebsiella phage vB_KpnM_05F genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

160. spacer 4.25|2081323|32|LR134141|PILER-CR matches to MN101223 (Klebsiella phage KOX10, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

161. spacer 4.25|2081323|32|LR134141|PILER-CR matches to KT001919 (Klebsiella phage Miro, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

162. spacer 4.25|2081323|32|LR134141|PILER-CR matches to HQ918180 (Klebsiella phage KP27, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

163. spacer 4.25|2081323|32|LR134141|PILER-CR matches to KT001918 (Klebsiella phage Matisse, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

164. spacer 4.25|2081323|32|LR134141|PILER-CR matches to LT607758 (Klebsiella phage PMBT1 genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

165. spacer 4.25|2081323|32|LR134141|PILER-CR matches to KX130727 (Escherichia phage phT4A, partial genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

166. spacer 4.25|2081323|32|LR134141|PILER-CR matches to KT321315 (Enterobacter phage phiEap-3, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

167. spacer 4.26|2081384|32|LR134141|PILER-CR matches to MN855955 (Bacteriophage sp. isolate 57, complete genome) position: , mismatch: 9, identity: 0.719

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
ggaaagttaccgcgacagcgcagcagatttca	Protospacer
 .* . * .**.***************** **

168. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ttgaacttcatttttattatcactcattttatt	Protospacer
 . . . ***** *********** ********

169. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to MT375519 (Pelagibacter phage Aegir EXVC01, complete genome) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
ttgaacttcatttttattatcactcattttatt	Protospacer
 . . . ***** *********** ********

170. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP029750 (Staphylococcus aureus strain Smith plasmid pSS41, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

171. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_KY436021 (Staphylococcus aureus strain NRL 99/049 plasmid pETB049, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

172. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_KY436022 (Staphylococcus aureus strain NRL 03/459 plasmid pETB459, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

173. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_KY436024 (Staphylococcus aureus strain NRL 13/791 plasmid pETB791, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

174. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_KY436025 (Staphylococcus aureus strain NRL 08/797 plasmid pETB797, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

175. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP029650 (Staphylococcus aureus strain AR_0471 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

176. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NC_022598 (Staphylococcus aureus TY825 plasmid pETB DNA, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

177. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NC_013334 (Staphylococcus aureus plasmid SAP057A, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

178. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NC_003265 (Staphylococcus aureus TY4 plasmid pETB, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

179. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to NZ_CP022683 (Staphylococcus aureus strain 78 plasmid pPS00085.1A.1, complete sequence) position: , mismatch: 9, identity: 0.727

gctgttatcattgttattatcactgattttatt	CRISPR spacer
taaatcaaaatggttattatcaccgattttatt	Protospacer
   .*.*  ** ***********.*********

180. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to LR746310 (Klebsiella phage vB_KpnM_05F genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

181. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to MN101223 (Klebsiella phage KOX10, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

182. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to KT001919 (Klebsiella phage Miro, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

183. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to HQ918180 (Klebsiella phage KP27, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

184. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to KT001918 (Klebsiella phage Matisse, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

185. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to LT607758 (Klebsiella phage PMBT1 genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

186. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to KX130727 (Escherichia phage phT4A, partial genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

187. spacer 4.37|2081315|32|LR134141|CRISPRCasFinder,CRT matches to KT321315 (Enterobacter phage phiEap-3, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagcctttccagttgagtttgcattgttc	CRISPR spacer
gggttgcctttccagttgaatttgcttgtcgc	Protospacer
  ** **************.***** *  . *

188. spacer 4.38|2081376|32|LR134141|CRISPRCasFinder,CRT matches to MN855955 (Bacteriophage sp. isolate 57, complete genome) position: , mismatch: 9, identity: 0.719

taatgctggccacgacagcgcagcagattaca	CRISPR spacer
ggaaagttaccgcgacagcgcagcagatttca	Protospacer
 .* . * .**.***************** **

189. spacer 2.4|957967|33|LR134141|PILER-CR matches to MN180249 (UNVERIFIED: Wolbachia phage WO isolate Seq2WORi_AMD2 genomic sequence) position: , mismatch: 10, identity: 0.697

gggacgtctttttatttcatctccttttctcgc	CRISPR spacer
ctgttgtcattttctttcatctccttttcgttg	Protospacer
  * .*** **** *************** .

190. spacer 2.18|957968|32|LR134141|CRISPRCasFinder,CRT matches to MG945729 (UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome) position: , mismatch: 10, identity: 0.688

ggacgtctttttatttcatctccttttctcgc	CRISPR spacer
cattgtcttttaatttaatctccttttttgta	Protospacer
 . .******* **** **********.*

191. spacer 2.18|957968|32|LR134141|CRISPRCasFinder,CRT matches to MN693323 (Marine virus AFVG_25M87, complete genome) position: , mismatch: 10, identity: 0.688

ggacgtctttttatttcatctccttttctcgc	CRISPR spacer
ttgtgtctttttaattcatcaccttttttata	Protospacer
  ..********* ****** ******.*

192. spacer 3.21|975309|32|LR134141|CRT matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
gcaaagaaaaacattggttaagttttaatgct	Protospacer
      ********* ***** *******..*

193. spacer 3.21|975309|32|LR134141|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
gcaaagaaaaacattggttaagttttaatgct	Protospacer
      ********* ***** *******..*

194. spacer 3.21|975309|32|LR134141|CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
tatagagcaaacatttgtttgcttttaatata	Protospacer
..*   . *********** .**********

195. spacer 3.33|975307|34|LR134141|PILER-CR matches to NC_002810 (Streptococcus mutans LM7 plasmid pLM7, complete sequence) position: , mismatch: 10, identity: 0.706

cgcgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
ttcgtttaaaaaacatttgttaagtttgctagat	Protospacer
. ***** *************** ***    . *

196. spacer 3.33|975307|34|LR134141|PILER-CR matches to NC_002757 (Streptococcus mutans UA140 plasmid pUA140, complete sequence) position: , mismatch: 10, identity: 0.706

cgcgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
ttcgtttaaaaaacatttgttaagtttgctagat	Protospacer
. ***** *************** ***    . *

197. spacer 3.33|975307|34|LR134141|PILER-CR matches to NC_019238 (Streptococcus mutans plasmid pDC09, complete sequence) position: , mismatch: 10, identity: 0.706

cgcgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
ttcgtttaaaaaacatttgttaagtttgctagat	Protospacer
. ***** *************** ***    . *

198. spacer 3.33|975307|34|LR134141|PILER-CR matches to NC_019239 (Streptococcus mutans plasmid pNC101, complete sequence) position: , mismatch: 10, identity: 0.706

cgcgttttaaaaacatttgttaacttttaatatt	CRISPR spacer
ttcgtttaaaaaacatttgttaagtttgctagat	Protospacer
. ***** *************** ***    . *

199. spacer 4.1|2079849|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to AP018399 (Xanthomonas phage XacN1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

gctcaaaaatcagttacagacaatactaacgc	CRISPR spacer
gtaggccaatcaggtacagacaatacgaacag	Protospacer
*.  .  ****** ************ ***.

200. spacer 4.2|2079910|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 10, identity: 0.688

tctttgacgctggcaatcgccacgttgtagag	CRISPR spacer
ctgctgacgctggcactcgccacggtgatctg	Protospacer
.. .*********** ******** **    *

201. spacer 4.2|2079910|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 10, identity: 0.688

tctttgacgctggcaatcgccacgttgtagag	CRISPR spacer
ctgctgacgctggcactcgccacggtgatctg	Protospacer
.. .*********** ******** **    *

202. spacer 4.28|2081506|32|LR134141|PILER-CR matches to AB050094 (Bacteriophage KVP40 genes for gp16v, gp17v, complete cds) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

203. spacer 4.28|2081506|32|LR134141|PILER-CR matches to MN794232 (Vibrio phage VH1_2019, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

204. spacer 4.28|2081506|32|LR134141|PILER-CR matches to NC_005083 (Vibrio phage KVP40, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

205. spacer 4.28|2081506|32|LR134141|PILER-CR matches to JN849462 (Vibriophage phi-pp2, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

206. spacer 4.28|2081506|32|LR134141|PILER-CR matches to MT135024 (Vibrio phage V05, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

207. spacer 4.28|2081506|32|LR134141|PILER-CR matches to AY283928 (Bacteriophage KVP40, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

208. spacer 4.28|2081506|32|LR134141|PILER-CR matches to MT135026 (Vibrio phage V09, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

209. spacer 4.28|2081506|32|LR134141|PILER-CR matches to MT135025 (Vibrio phage V07, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

210. spacer 4.28|2081506|32|LR134141|PILER-CR matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
accgcatcaacgcgaaacggtctatgccactg	Protospacer
.************ *******.** ..* ..

211. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 10, identity: 0.697

gctgttatcattgttattatcactgattttatt	CRISPR spacer
cataaagtcattgttattatcactgtctttacg	Protospacer
  *.  .****************** .****.

212. spacer 4.30|2080886|33|LR134141|CRISPRCasFinder,CRT matches to MK256395 (Bacillus phage phiKir1 clone phiKir1-sq7 putative structural protein and hypothetical protein genes, partial cds) position: , mismatch: 10, identity: 0.697

gctgttatcattgttattatcactgattttatt	CRISPR spacer
cataaagtcattgttattatcactgtctttacg	Protospacer
  *.  .****************** .****.

213. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to AB050094 (Bacteriophage KVP40 genes for gp16v, gp17v, complete cds) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

214. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to MN794232 (Vibrio phage VH1_2019, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

215. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to NC_005083 (Vibrio phage KVP40, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

216. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to JN849462 (Vibriophage phi-pp2, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

217. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to MT135024 (Vibrio phage V05, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

218. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to AY283928 (Bacteriophage KVP40, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

219. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to MT135026 (Vibrio phage V09, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

220. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to MT135025 (Vibrio phage V07, complete genome) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
cttacatcaacgccaaacggcttgaatcacta	Protospacer
 ...****************.**.**** ..

221. spacer 4.40|2081498|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 10, identity: 0.688

gccgcatcaacgccaaacggtttaaatcctcc	CRISPR spacer
accgcatcaacgcgaaacggtctatgccactg	Protospacer
.************ *******.** ..* ..

222. spacer 4.42|2081620|32|LR134141|CRISPRCasFinder,CRT matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 10, identity: 0.688

gtcaggaggtgattcacttggtactggctgat	CRISPR spacer
tattgcaggtgaatcacttggtagtggcttca	Protospacer
  . * ****** ********** *****

223. spacer 4.42|2081620|32|LR134141|CRISPRCasFinder,CRT matches to MF417844 (Uncultured Caudovirales phage clone 8AX_10, partial genome) position: , mismatch: 10, identity: 0.688

gtcaggaggtgattcacttggtactggctgat	CRISPR spacer
tattgcaggtgaatcacttggtagtggcttca	Protospacer
  . * ****** ********** *****

224. spacer 4.42|2081620|32|LR134141|CRISPRCasFinder,CRT matches to MF417989 (Uncultured Caudovirales phage clone 7F_4, partial genome) position: , mismatch: 10, identity: 0.688

gtcaggaggtgattcacttggtactggctgat	CRISPR spacer
tattgcaggtgaatcacttggtagtggcttca	Protospacer
  . * ****** ********** *****

225. spacer 3.34|975368|34|LR134141|PILER-CR matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 11, identity: 0.676

cgcggctgccaatatccggcaggcacgcgctatg	CRISPR spacer
cgcggctgtgaatatccggcaggcttttccagcc	Protospacer
********. ************** . . * ..

226. spacer 3.34|975368|34|LR134141|PILER-CR matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 11, identity: 0.676

cgcggctgccaatatccggcaggcacgcgctatg	CRISPR spacer
cgcggctgtgaatatccggcaggcttttccagcc	Protospacer
********. ************** . . * ..

227. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 11, identity: 0.656

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
cggggcggccgtcccagaagccgatgacgggg	Protospacer
 .. .  **.******** ***********.

228. spacer 4.13|2080581|32|LR134141|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 11, identity: 0.656

aaacaacgctgtcccagatgccgatgacggat	CRISPR spacer
tccttgcgctgacccagatgccgataacgctc	Protospacer
   . .***** *************.***  .

229. spacer 4.22|2081139|32|LR134141|PILER-CR matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

cgacctgttccggaaataccgcgcccgccgtg	CRISPR spacer
gtcatcattccggaaaaaccgcgcccgacgat	Protospacer
    ...********* ********** **

230. spacer 4.34|2081131|32|LR134141|CRISPRCasFinder,CRT matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

cgacctgttccggaaataccgcgcccgccgtg	CRISPR spacer
gtcatcattccggaaaaaccgcgcccgacgat	Protospacer
    ...********* ********** **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

301211 : 307068

Dickeya_phage(33.33%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA00372.1\|301211_301502_-	membrane protein	A0A2I7SAW6	Vibrio_phage	1.1e-10	50.8
VEA00373.1\|301736_301880_-	membrane protein	NA	NA	NA	NA
VEA00374.1\|301960_302296_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	A0A140XB86	Dickeya_phage	8.4e-10	83.3
VEA00375.1\|302319_303963_-	methyl-accepting chemotaxis citrate transducer	A0A2H4J162	uncultured_Caudovirales_phage	2.6e-11	29.4
VEA00376.1\|304163_305708_-	heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	2.2e-89	38.2
VEA00377.1\|305668_306361_-	heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	8.3e-12	31.0
VEA00378.1\|306441_307068_-	putative enzyme yhhN	A0A140XAH6	Dickeya_phage	3.8e-32	64.6

DBSCAN-SWA_2

983046 : 990464

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA01096.1\|983046_983808_+	stationary phase survival protein SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-57	48.8
VEA01097.1\|983801_984428_+	L-isoaspartyl protein carboxyl methyltransferase type II	A0A1B1IU40	uncultured_Mediterranean_phage	8.2e-35	49.4
VEA01098.1\|984602_985736_+	lipoprotein NlpD	D7RWE0	Brochothrix_phage	5.0e-06	35.6
VEA01099.1\|985798_986566_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	8.6e-26	41.3
VEA01100.1\|986562_986793_+	RNA polymerase sigma factor rpoS	A0A1W6DY88	Aeromonas_phage	1.1e-05	45.5
VEA01101.1\|986839_987076_-	Hydroxyaromatic non-oxidative decarboxylaseprotein D	NA	NA	NA	NA
VEA01102.1\|987086_988514_-	Hydroxyaromatic non-oxidative decarboxylaseprotein B, Hydroxyaromatic non-oxidatived ecarboxylase protein C	NA	NA	NA	NA
VEA01103.1\|988513_989107_-	decarboxylase	NA	NA	NA	NA
VEA01104.1\|989276_989681_+	Transcriptional regulator hosA	NA	NA	NA	NA
VEA01105.1\|989699_990464_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	1.5e-70	57.5

DBSCAN-SWA_3

1315405 : 1320668

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA01416.1\|1315405_1316044_-	phosphoribosylglycinamidine myltransferase	E3SNR5	Prochlorococcus_phage	7.4e-31	43.6
VEA01417.1\|1316043_1316322_-	phosphoribosylaminoimidazole synthetase (AIR synthetase)	NA	NA	NA	NA
VEA01418.1\|1316276_1316630_-	phosphoribosylaminoimidazole synthetase (AIR synthetase)	M4QRQ6	Synechococcus_phage	3.7e-16	42.3
VEA01419.1\|1316586_1317081_-	phosphoribosylaminoimidazole synthetase	Q58MH8	Prochlorococcus_phage	2.2e-35	51.9
VEA01420.1\|1317484_1317610_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
VEA01421.1\|1317569_1317779_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
VEA01422.1\|1317855_1318110_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
VEA01423.1\|1318197_1318701_+	uracil permease	Q9KX94	Enterobacteria_phage	1.0e-06	29.0
VEA01424.1\|1318682_1319486_+	uracil permease	Q9KX94	Enterobacteria_phage	4.4e-33	36.1
VEA01425.1\|1319556_1320282_+	Chromosomal replication initiator protein DnaA	NA	NA	NA	NA
VEA01426.1\|1320308_1320668_-	arsenate reductase (arsenical pump modifier)	A0A2H4J8T1	uncultured_Caudovirales_phage	8.1e-19	45.6

DBSCAN-SWA_4

1547532 : 1561576

Pseudoalteromonas_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA01665.1\|1547532_1548603_+	glycerophosphoryl diester phosphodiesterase periplasmic	A0A220BYK6	Staphylococcus_phage	6.6e-08	46.0
VEA01666.1\|1548738_1549596_-	transcriptional regulator	NA	NA	NA	NA
VEA01667.1\|1549730_1550951_+	permease	NA	NA	NA	NA
VEA01668.1\|1550952_1551207_-	ferredoxin	G9IAA2	Pseudomonas_phage	3.1e-25	74.6
VEA01669.1\|1551206_1551593_-	ribonucleoside-diphosphate reductase 1 subunit beta	G9IAA3	Pseudomonas_phage	1.1e-53	78.1
VEA01670.1\|1551573_1551915_-	ribonucleoside-diphosphate reductase 1 subunit beta	A0A2H5BJL6	Erwinia_phage	3.0e-39	75.2
VEA01671.1\|1552067_1552340_-	ribonucleoside-diphosphate reductase 1 subunit beta	A0A218MAG5	Escherichia_phage	7.4e-33	87.3
VEA01672.1\|1552452_1552977_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	A0A2D1GNB1	Pseudoalteromonas_phage	2.7e-63	69.4
VEA01673.1\|1552948_1553662_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	M4M9Q6	Vibrio_phage	2.8e-63	53.1
VEA01674.1\|1553799_1554594_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	A0A1W5PTL2	Pseudoalteromonas_phage	7.7e-70	69.1
VEA01675.1\|1554562_1554742_-	Ribonucleotide reductase of class Ia (aerobic)alpha subunit	A0A1W5PTL2	Pseudoalteromonas_phage	8.6e-14	70.6
VEA01676.1\|1555098_1555824_-	3-demethylubiquinone-9 3-methyltransferase	NA	NA	NA	NA
VEA01677.1\|1555974_1556550_+	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	3.8e-34	47.7
VEA01678.1\|1556506_1558612_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.9e-43	25.8
VEA01679.1\|1558729_1561576_+	sensor protein RcsC	A0A1V0SGX0	Hokovirus	3.2e-41	26.4

DBSCAN-SWA_5

1591149 : 1598842

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA01712.1\|1591149_1592157_+	nucleoid-asociated protein	A0A1V0E8C0	Vibrio_phage	2.2e-82	48.0
VEA01713.1\|1592272_1592557_-	50S ribosomal protein L25	NA	NA	NA	NA
VEA01714.1\|1592681_1593566_-	helicase	M4Q3N1	Vibrio_phage	9.9e-34	46.2
VEA01715.1\|1593562_1594072_-	helicase	M4Q3N1	Vibrio_phage	2.2e-25	38.5
VEA01716.1\|1594028_1594445_-	helicase	A0A2P1MXB6	Escherichia_phage	2.6e-21	45.2
VEA01717.1\|1594596_1595064_+	ribosomal small subunit pseudouridine synthase	NA	NA	NA	NA
VEA01718.1\|1595020_1595269_+	ribosomal small subunit pseudouridine synthase	NA	NA	NA	NA
VEA01719.1\|1595321_1596053_+	bicyclomycin resistance protein	S4TR35	Salmonella_phage	2.2e-18	25.9
VEA01720.1\|1596006_1596543_+	bicyclomycin resistance protein	NA	NA	NA	NA
VEA01721.1\|1597027_1597249_+	Uncharacterised protein	NA	NA	NA	NA
VEA01722.1\|1597252_1598842_-	ABC-transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-18	32.0

DBSCAN-SWA_6

1665960 : 1674527

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA01786.1\|1665960_1666908_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-23	30.8
VEA01787.1\|1666891_1667623_+	putative permease transmembrane component	NA	NA	NA	NA
VEA01788.1\|1667603_1667711_-	membrane protein	NA	NA	NA	NA
VEA01789.1\|1667770_1668502_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
VEA01790.1\|1668724_1670410_+	putative sensor kinase	Q9EYF3	Enterobacteria_phage	2.9e-276	90.6
VEA01791.1\|1670406_1671126_+	two-component system response regulator	NA	NA	NA	NA
VEA01792.1\|1671172_1671643_+	Protein of uncharacterised function (DUF1456)	Q9EYF4	Enterobacteria_phage	2.7e-75	91.0
VEA01793.1\|1671794_1672253_-	lipoprotein	Q9EYF5	Enterobacteria_phage	2.0e-54	74.5
VEA01794.1\|1672493_1674527_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	2.8e-55	27.6

DBSCAN-SWA_7

1736797 : 1745965

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA01905.1\|1736797_1738201_+	Colanic acid biosynthesis protein wcaM	A0A291LBB9	Klebsiella_phage	6.8e-21	26.1
VEA01907.1\|1738377_1739217_+	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	5.5e-42	43.0
VEA01909.1\|1739649_1740735_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.1e-102	53.6
VEA01911.1\|1740734_1741634_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	6.7e-30	36.0
VEA01913.1\|1741681_1742560_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.6e-108	65.5
VEA01915.1\|1742563_1743112_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.6
VEA01917.1\|1743117_1744092_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
VEA01919.1\|1744107_1744881_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
VEA01921.1\|1744885_1745965_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.0e-17	25.0

DBSCAN-SWA_8

2182669 : 2193067

Escherichia_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA02883.1\|2182669_2183827_+	chemo-receptor protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-09	27.2
VEA02885.1\|2183969_2184953_+	membrane transport protein	NA	NA	NA	NA
VEA02887.1\|2185440_2186217_+	ATP-dependent RNA helicase	A0A1V0SBR7	Catovirus	4.5e-22	27.5
VEA02889.1\|2186245_2186815_+	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-15	37.5
VEA02891.1\|2186858_2187293_-\|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	A0A0U2S5Z2	Escherichia_phage	1.0e-47	97.8
VEA02893.1\|2187258_2187795_-\|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	A0A0U2S5Z2	Escherichia_phage	2.7e-87	97.0
VEA02895.1\|2188481_2191904_+	secretion protein EspN	A0A0N7KZG3	Stx2-converting_phage	0.0e+00	51.1
VEA02897.1\|2192241_2192580_+	Multidrug transporter emrE Efflux-multidrug resistance protein emrE; Methyl viologen resistance protein C; Ethidium resistance protein	NA	NA	NA	NA
VEA02899.1\|2192632_2193067_-	Universal stress protein F	A0A1W6JNV4	Morganella_phage	9.4e-30	52.1

DBSCAN-SWA_9

2620149 : 2681472

Salmonella_phage(38.46%)

holin,terminase,lysis,protease,tail,portal,head,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA03865.1\|2620149_2624310_-\|protease	hemoglobin protease	Q9LA54	Enterobacteria_phage	5.3e-303	42.0
VEA03867.1\|2624795_2625173_+	phage-like protein	NA	NA	NA	NA
VEA03869.1\|2625787_2626390_+	phage-like protein	NA	NA	NA	NA
VEA03871.1\|2626373_2626877_+	phage-like protein	NA	NA	NA	NA
VEA03873.1\|2627350_2628424_+	invasion plasmid antigen / internalinputative	NA	NA	NA	NA
VEA03875.1\|2628578_2629721_+	invasion plasmid antigen / internalinputative	NA	NA	NA	NA
VEA03877.1\|2629798_2630011_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	90.7
VEA03879.1\|2630264_2630936_+	Gifsy-2 prophage protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.3e-81	61.3
VEA03881.1\|2632905_2633313_-	Fels-2 prophage Tfa	A0A1B0V844	Salmonella_phage	1.8e-67	92.6
VEA03883.1\|2633319_2634534_-\|tail	phage tail fiber protein	A0A1B0V7G4	Salmonella_phage	3.0e-65	39.5
VEA03885.1\|2635635_2635878_-	Uncharacterised protein	NA	NA	NA	NA
VEA03887.1\|2635916_2639279_-\|tail	Phage tail fiber protein	K7PKJ2	Enterobacteria_phage	0.0e+00	80.5
VEA03889.1\|2639341_2639848_-\|tail	tail protein	A5LH42	Enterobacteria_phage	1.4e-69	79.8
VEA03891.1\|2639886_2640624_-	Tail fiber component K	K7PLW1	Enterobacteria_phage	1.3e-127	84.2
VEA03893.1\|2640630_2641329_-\|tail	Minor tail protein L	A0A1B5FP81	Escherichia_phage	3.2e-104	76.3
VEA03895.1\|2641338_2641668_-\|tail	tail protein	A5LH39	Enterobacteria_phage	7.3e-43	71.3
VEA03897.1\|2641670_2644766_-\|tail	tail protein	A0A291AWX1	Escherichia_phage	5.1e-271	60.6
VEA03899.1\|2644737_2645052_-\|tail	minor tail-like protein	A5LH37	Enterobacteria_phage	1.1e-30	63.8
VEA03901.1\|2645072_2645468_-\|tail	minor tail protein	A5LH36	Enterobacteria_phage	2.3e-30	56.5
VEA03903.1\|2645519_2645855_-\|tail	putative tail component of prophage	A0A291AWU6	Escherichia_phage	8.9e-28	69.4
VEA03905.1\|2645877_2646264_-\|tail	putative tail component of prophage	A5LH35	Enterobacteria_phage	5.9e-60	83.6
VEA03907.1\|2646392_2646677_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	9.8e-44	98.9
VEA03909.1\|2646673_2646958_-	Gifsy-1 prophagei VmtZ	A5LH33	Enterobacteria_phage	6.8e-37	78.7
VEA03911.1\|2647218_2647617_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	2.4e-27	53.0
VEA03913.1\|2647627_2647987_-	DNA packaging protein	NA	NA	NA	NA
VEA03915.1\|2648120_2649074_-\|head	head protein	C6ZCY2	Enterobacteria_phage	1.3e-103	59.7
VEA03917.1\|2649128_2649476_-	Head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
VEA03919.1\|2649488_2650985_-	scaffold protein	A0A0K2FI53	Enterobacteria_phage	4.3e-98	52.7
VEA03921.1\|2650974_2652462_-\|portal	phage portal protein, lambda family	K7P6U7	Enterobacteria_phage	5.8e-180	63.3
VEA03923.1\|2652454_2652757_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	4.9e-17	73.8
VEA03926.1\|2652740_2654672_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	2.8e-259	65.9
VEA03928.1\|2654643_2655189_-\|terminase	terminase	A0A0U2S671	Escherichia_phage	2.5e-56	79.9
VEA03930.1\|2655233_2655425_-	Uncharacterised protein	NA	NA	NA	NA
VEA03932.1\|2655447_2655897_-	Uncharacterised protein	NA	NA	NA	NA
VEA03934.1\|2656130_2656598_-\|lysis	bacteriophage lysis protein	A0A0M4RD57	Salmonella_phage	3.7e-56	81.0
VEA03936.1\|2656698_2657238_-	Phage endolysin R	K7PLY1	Enterobacteria_phage	2.2e-76	70.6
VEA03938.1\|2657215_2657524_-\|holin	phage-holin analog protein	NA	NA	NA	NA
VEA03940.1\|2657709_2658255_+	Uncharacterised protein	NA	NA	NA	NA
VEA03942.1\|2658245_2658452_-	Uncharacterised protein	NA	NA	NA	NA
VEA03944.1\|2659315_2659873_-	antirepressor	A0A0P0ZC44	Stx2-converting_phage	5.8e-56	92.2
VEA03946.1\|2660145_2660823_-	antitermination protein	I6PDF8	Cronobacter_phage	1.3e-62	54.0
VEA03948.1\|2660819_2660960_-	DNA breaking-rejoining protein	A0A0M5M7B2	Salmonella_phage	8.0e-07	76.3
VEA03950.1\|2660956_2661568_-	bacteriophage Lambda NinG protein	A0A0M4RU10	Salmonella_phage	3.6e-91	98.0
VEA03952.1\|2661570_2661777_-	Phage protein	S4TNP0	Salmonella_phage	4.6e-35	98.5
VEA03954.1\|2661776_2662379_-	bacteriophage protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
VEA03956.1\|2662794_2663028_-	DNA damage-inducible protein I	A0A0M4REN2	Salmonella_phage	6.0e-31	85.7
VEA03958.1\|2663619_2664216_+	Uncharacterised protein	NA	NA	NA	NA
VEA03960.1\|2664227_2665205_+	Uncharacterised protein	NA	NA	NA	NA
VEA03962.1\|2665259_2665520_-	putative DNA methyl transferase	NA	NA	NA	NA
VEA03964.1\|2665516_2666161_-	Phage EaA protein	H6WRY2	Salmonella_phage	5.3e-29	40.5
VEA03966.1\|2666164_2666473_-	Uncharacterised protein	A0A1P8DTP0	Salmonella_phage	1.6e-31	71.6
VEA03968.1\|2666476_2666935_-	prophage protein	S4TNP2	Salmonella_phage	7.1e-44	77.4
VEA03970.1\|2666931_2667279_-	DNA-binding protein	H6WRX9	Salmonella_phage	4.4e-54	92.2
VEA03972.1\|2667289_2668039_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	4.3e-139	100.0
VEA03974.1\|2668041_2669019_-	regulatory protein	H6WRX7	Salmonella_phage	4.7e-162	99.0
VEA03976.1\|2669109_2669430_-	repressor	A0A0M4RU01	Salmonella_phage	1.3e-52	100.0
VEA03978.1\|2669449_2669689_-	phage regulatory protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
VEA03980.1\|2669808_2670219_+	regulatory protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
VEA03982.1\|2670268_2670529_+	prophage protein	NA	NA	NA	NA
VEA03984.1\|2670521_2670680_+	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
VEA03986.1\|2670764_2671052_+	Gifsy-1 prophage protein	H6WRX2	Salmonella_phage	3.0e-48	100.0
VEA03988.1\|2671178_2673890_+	exonuclease VIII	H6WRX1	Salmonella_phage	1.7e-156	44.7
VEA03990.1\|2673882_2674713_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
VEA03992.1\|2674748_2675069_+	Uncharacterised protein	A0A222YY67	Escherichia_phage	3.6e-34	60.2
VEA03994.1\|2675061_2675394_+	bacteriophage protein	S4TNP2	Salmonella_phage	4.9e-10	63.6
VEA03996.1\|2675390_2675894_+	Eaa protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
VEA03998.1\|2675943_2676180_+	excisionase	NA	NA	NA	NA
VEA04000.1\|2676169_2677312_+	Integrase	O21929	Phage_21	8.2e-174	80.3
VEA04002.1\|2677425_2678676_-	isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
VEA04004.1\|2678775_2679513_+	putative ribosomal large subunit pseudouridine synthase	NA	NA	NA	NA
VEA04006.1\|2679509_2679839_+	putative secreted protein	NA	NA	NA	NA
VEA04008.1\|2679850_2680312_+	mutT family protein	NA	NA	NA	NA
VEA04010.1\|2680365_2681472_+\|tRNA	tRNA-specific 2-thiouridylase MnmA	NA	NA	NA	NA

DBSCAN-SWA_10

2903487 : 2913378

Escherichia_phage(57.14%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA04469.1\|2903487_2904105_-	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.6e-75	59.1
VEA04471.1\|2904115_2905174_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.7e-93	49.7
VEA04473.1\|2905151_2905763_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	8.8e-58	53.7
VEA04475.1\|2905791_2906562_-	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.8e-52	50.2
VEA04477.1\|2906799_2908092_-\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.7
VEA04479.1\|2908350_2909697_-	Holliday junction DNA helicase	G3MBE0	Bacillus_virus	2.1e-80	40.9
VEA04481.1\|2909702_2910314_-	outer-membrane lipoprotein carrier protein	NA	NA	NA	NA
VEA04482.1\|2910456_2913378_-	cell division protein FtsK	S5VNE3	Mycobacterium_phage	2.1e-88	49.5

DBSCAN-SWA_11

2925058 : 2931434

Vibrio_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA04507.1\|2925058_2925241_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2I7SAX5	Vibrio_phage	2.0e-05	53.7
VEA04509.1\|2925248_2926832_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	5.0e-145	48.4
VEA04511.1\|2926994_2927246_-\|protease	ATP-dependent Clp protease ATP-binding subunit	NA	NA	NA	NA
VEA04513.1\|2927367_2927610_-\|protease	ATP-dependent clp protease adaptor protein	A0A1B1IT64	uncultured_Mediterranean_phage	6.4e-12	44.9
VEA04515.1\|2928012_2928234_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
VEA04517.1\|2928372_2930319_-	ABC transporter	G9BWD6	Planktothrix_phage	1.2e-39	41.9
VEA04519.1\|2930315_2931434_-	Macrolide-specific efflux protein MacA	A0A140XAI1	Dickeya_phage	1.1e-08	38.9

DBSCAN-SWA_12

3343969 : 3401847

Bacillus_phage(23.08%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA05425.1\|3343969_3344887_+\|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	NA	NA	NA	NA
VEA05427.1\|3344883_3345336_+\|protease	Putative activity regulator of membraneprotease YbbK	NA	NA	NA	NA
VEA05429.1\|3345336_3345753_-	copper efflux regulator	NA	NA	NA	NA
VEA05431.1\|3345862_3347137_+	Lead cadmium zinc and mercury transporting ATPase	NA	NA	NA	NA
VEA05433.1\|3347111_3348365_+	Lead cadmium zinc and mercury transporting ATPase	A0A218MNH6	uncultured_virus	4.8e-66	41.6
VEA05435.1\|3349500_3349980_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
VEA05437.1\|3350103_3351756_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
VEA05439.1\|3352044_3352797_+	fosmidomycin resistance protein	NA	NA	NA	NA
VEA05441.1\|3352786_3353056_+	fosmidomycin resistance protein	NA	NA	NA	NA
VEA05443.1\|3353367_3354507_+	transport protein	NA	NA	NA	NA
VEA05445.1\|3354472_3354790_+	transport protein	NA	NA	NA	NA
VEA05447.1\|3355166_3356471_-	inosine/guanosine kinase	NA	NA	NA	NA
VEA05449.1\|3356623_3357595_+	acetyl esterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	6.6e-15	27.4
VEA05451.1\|3357591_3357993_-	ferrochelatase	NA	NA	NA	NA
VEA05453.1\|3358105_3358555_-	ferrochelatase	NA	NA	NA	NA
VEA05455.1\|3358756_3359242_-	adenylate kinase	NA	NA	NA	NA
VEA05457.1\|3359216_3359402_-	adenylate kinase	NA	NA	NA	NA
VEA05459.1\|3359643_3361518_-	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	3.4e-116	37.1
VEA05461.1\|3361628_3362234_-	recombination protein RecR	NA	NA	NA	NA
VEA05463.1\|3362233_3362563_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA
VEA05465.1\|3364650_3365202_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.0e-28	45.2
VEA05467.1\|3365354_3365732_-	Inner membrane protein YbaN	NA	NA	NA	NA
VEA05469.1\|3365812_3366328_+	Primosomal replication protein N prime prime	NA	NA	NA	NA
VEA05471.1\|3366341_3366509_+	Putative inner membrane protein	NA	NA	NA	NA
VEA05473.1\|3366578_3367514_+\|transposase	ISNCY transposase	Q2A0A7	Sodalis_phage	2.5e-64	52.5
VEA05475.1\|3367555_3370918_-	integral membrane protein AefA	NA	NA	NA	NA
VEA05477.1\|3371036_3371690_-	potential acrAB operon repressor	NA	NA	NA	NA
VEA05479.1\|3371831_3373025_+	acriflavin resistance protein A	NA	NA	NA	NA
VEA05481.1\|3373047_3374748_+	acriflavin resistance protein B	NA	NA	NA	NA
VEA05483.1\|3374770_3375280_+	acriflavin resistance protein B	NA	NA	NA	NA
VEA05484.1\|3375369_3376152_+	acriflavin resistance protein B	NA	NA	NA	NA
VEA05486.1\|3376698_3377073_+	Hha toxicity attenuator	NA	NA	NA	NA
VEA05488.1\|3377100_3377319_+	hemolysin expression modulating protein	NA	NA	NA	NA
VEA05490.1\|3377497_3378049_+	maltose O-acetyltransferase	NA	NA	NA	NA
VEA05491.1\|3378165_3378636_+	Putative inner membrane protein	NA	NA	NA	NA
VEA05493.1\|3378836_3379097_-	50S ribosomal protein L31	NA	NA	NA	NA
VEA05495.1\|3379321_3380872_+	Uncharacterized protein ylaB	NA	NA	NA	NA
VEA05497.1\|3381180_3381492_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
VEA05499.1\|3381524_3382094_-	lipoprotein	NA	NA	NA	NA
VEA05501.1\|3382308_3383169_+	acyl-CoA thioesterase II	NA	NA	NA	NA
VEA05503.1\|3383268_3384555_-	ammonium transporter	NA	NA	NA	NA
VEA05505.1\|3384586_3384925_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
VEA05507.1\|3385138_3385453_-	Multidrug resistance-like ATP-binding protein mdlB	NA	NA	NA	NA
VEA05509.1\|3385442_3385958_-	Multidrug resistance-like ATP-binding protein mdlB	F2Y2R6	Organic_Lake_phycodnavirus	1.3e-09	31.8
VEA05511.1\|3385962_3386922_-	Multidrug resistance-like ATP-binding protein mdlB	W8CYL7	Bacillus_phage	3.3e-11	24.0
VEA05513.1\|3386914_3388687_-	ABC transporter ATP-binding membrane protein	W8CYL7	Bacillus_phage	1.8e-50	29.6
VEA05515.1\|3388727_3389186_-	transcriptional regulator	NA	NA	NA	NA
VEA05517.1\|3389298_3390354_+	lyase	NA	NA	NA	NA
VEA05519.1\|3390403_3390625_-	HMP-PP phosphatase	NA	NA	NA	NA
VEA05521.1\|3390765_3391224_-	HMP-PP phosphatase	NA	NA	NA	NA
VEA05523.1\|3391324_3393025_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
VEA05525.1\|3393089_3393785_+	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.7e-87	68.0
VEA05527.1\|3393890_3394289_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA
VEA05529.1\|3394392_3394767_-	competence protein ComEA	NA	NA	NA	NA
VEA05531.1\|3394916_3396788_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA
VEA05533.1\|3397078_3397351_-	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.9e-20	58.4
VEA05535.1\|3397559_3399914_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	7.2e-225	52.5
VEA05537.1\|3400099_3401371_-\|protease	ATP-dependent clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.5e-131	56.5
VEA05539.1\|3401622_3401847_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	7.5e-15	54.7

DBSCAN-SWA_13

3698105 : 3746430

Bacillus_virus(16.67%)

bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA06150.1\|3698105_3699047_+\|tRNA	glutamyl-Q tRNA(Asp) synthetase	NA	NA	NA	NA
VEA06152.1\|3699188_3701258_+	poly(A) polymerase	G3MAR3	Bacillus_virus	4.0e-25	35.9
VEA06154.1\|3701712_3702966_+	putative fimbrial protein	NA	NA	NA	NA
VEA06156.1\|3703078_3703873_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
VEA06158.1\|3703998_3704850_+	pantoate:beta-alanine ligase	NA	NA	NA	NA
VEA06160.1\|3705517_3705898_+	aspartate 1-decarboxylase	NA	NA	NA	NA
VEA06162.1\|3706222_3706825_+	fimbrial protein StkA	NA	NA	NA	NA
VEA06164.1\|3706905_3707649_+	fimbrial assembly chaperone protein StcB	NA	NA	NA	NA
VEA06166.1\|3707714_3708377_+	fimbrial outer membrane usher protein	NA	NA	NA	NA
VEA06168.1\|3708447_3710313_+	fimbrial outer membrane usher protein	NA	NA	NA	NA
VEA06170.1\|3710329_3710941_+	fimbrial protein	NA	NA	NA	NA
VEA06172.1\|3710967_3711510_+	fimbrial protein	NA	NA	NA	NA
VEA06174.1\|3711566_3712157_+	fimbrial protein	NA	NA	NA	NA
VEA06176.1\|3712182_3712734_+	fimbrial protein	NA	NA	NA	NA
VEA06177.1\|3712752_3713343_+	fimbrial protein	NA	NA	NA	NA
VEA06179.1\|3713354_3714425_+	fimbrial protein	NA	NA	NA	NA
VEA06181.1\|3714425_3715655_-	polysaccharide deacetylase domain protein	NA	NA	NA	NA
VEA06183.1\|3715715_3716156_-	PTS system IIA component	NA	NA	NA	NA
VEA06185.1\|3716261_3717032_-	ABC transporter	NA	NA	NA	NA
VEA06187.1\|3717028_3717955_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.6e-21	33.2
VEA06189.1\|3718063_3718726_+	carbonic anhydrase	NA	NA	NA	NA
VEA06191.1\|3718783_3719320_-	Hypoxanthine-guanine phosphoribosyl transferase	A0A218MMB5	uncultured_virus	7.8e-18	33.1
VEA06193.1\|3719525_3721916_+	glucose dehydrogenase	NA	NA	NA	NA
VEA06195.1\|3721993_3723604_-	Blue copper oxidase CueO	A0A0C6DWA2	Mamastrovirus	3.0e-20	59.8
VEA06197.1\|3723766_3724153_+	lipoprotein, PulS/OutS family	NA	NA	NA	NA
VEA06199.1\|3724259_3724718_+	spermidine synthase	NA	NA	NA	NA
VEA06201.1\|3724668_3725121_+	spermidine synthase	NA	NA	NA	NA
VEA06203.1\|3725141_3725936_+	S-adenosylmethionine decarboxylase proenzyme	NA	NA	NA	NA
VEA06205.1\|3725965_3726733_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	2.8e-29	35.7
VEA06207.1\|3726742_3727726_-	4-hydroxythreonine-4-phosphate dehydrogenase	NA	NA	NA	NA
VEA06209.1\|3727715_3728801_-	membrane protein	NA	NA	NA	NA
VEA06211.1\|3728775_3728988_-	Dihydrodipicolinate synthase	NA	NA	NA	NA
VEA06213.1\|3728984_3729284_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA
VEA06215.1\|3729256_3729679_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA
VEA06217.1\|3729810_3729942_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA
VEA06219.1\|3730177_3730540_-	protein YacL	NA	NA	NA	NA
VEA06221.1\|3730512_3731934_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
VEA06223.1\|3731899_3732106_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
VEA06225.1\|3732056_3733328_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
VEA06227.1\|3733752_3735303_+	membrane protein	NA	NA	NA	NA
VEA06229.1\|3735315_3736107_+	probable secreted protein	NA	NA	NA	NA
VEA06231.1\|3736144_3736429_-	putative secreted protein	NA	NA	NA	NA
VEA06233.1\|3736764_3738189_-	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-41	27.1
VEA06235.1\|3738390_3740280_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
VEA06237.1\|3740294_3742958_-	pyruvate dehydrogenase E1 component	NA	NA	NA	NA
VEA06239.1\|3743117_3743882_-	pyruvate dehydrogenase complex repressor	NA	NA	NA	NA
VEA06241.1\|3744333_3744624_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEA06243.1\|3744693_3744984_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEA06245.1\|3745053_3745344_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEA06247.1\|3745413_3745710_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEA06249.1\|3745779_3746070_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEA06251.1\|3746139_3746430_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_14

4322280 : 4366310

Burkholderia_phage(31.58%)

plate,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA07440.1\|4322280_4323279_-\|tRNA	tRNA dihydrouridine synthase A	NA	NA	NA	NA
VEA07442.1\|4323367_4324678_-	conjugative transfer protein	NA	NA	NA	NA
VEA07444.1\|4324924_4325440_+	zinc uptake regulation protein	NA	NA	NA	NA
VEA07446.1\|4325538_4325751_-	stress-response protein	NA	NA	NA	NA
VEA07448.1\|4325769_4327206_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA
VEA07450.1\|4327384_4327993_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
VEA07452.1\|4328101_4328470_-	diacylglycerol kinase	NA	NA	NA	NA
VEA07454.1\|4328767_4331062_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
VEA07456.1\|4331172_4332045_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
VEA07458.1\|4332058_4332556_-	chorismate lyase	NA	NA	NA	NA
VEA07460.1\|4332738_4333656_-	maltose operon periplasmic protein	NA	NA	NA	NA
VEA07462.1\|4333819_4335178_-	maltoporin	NA	NA	NA	NA
VEA07465.1\|4335265_4335766_-	maltose/maltodextrin transport ATP-binding protein	NA	NA	NA	NA
VEA07467.1\|4335725_4336376_-	maltose/maltodextrin transport ATP-binding protein	Q6GZ03	Mycoplasma_phage	4.3e-10	51.6
VEA07469.1\|4336501_4336825_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VEA07471.1\|4336883_4337672_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VEA07473.1\|4337692_4337929_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA
VEA07475.1\|4338060_4339605_+	maltose transport inner membrane protein	NA	NA	NA	NA
VEA07477.1\|4339619_4340510_+	maltose transport inner membrane protein	NA	NA	NA	NA
VEA07479.1\|4340539_4340752_+	Uncharacterised protein	NA	NA	NA	NA
VEA07481.1\|4340851_4342327_+	D-xylose transporter XylE	NA	NA	NA	NA
VEA07483.1\|4342372_4342783_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
VEA07485.1\|4342924_4345021_-	lipoprotein	NA	NA	NA	NA
VEA07487.1\|4345020_4345758_-	putative lipoprotein	NA	NA	NA	NA
VEA07489.1\|4345754_4346393_-	outer membrane lipoprotein	NA	NA	NA	NA
VEA07491.1\|4346456_4346702_-	YjbE secreted protein	NA	NA	NA	NA
VEA07493.1\|4347260_4348793_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA
VEA07495.1\|4349181_4350531_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA
VEA07497.1\|4350665_4351013_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
VEA07499.1\|4351589_4351877_+	membrane protein	Q6QIC8	Burkholderia_phage	1.8e-16	49.1
VEA07501.1\|4351879_4352485_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	6.7e-58	58.3
VEA07503.1\|4352497_4352812_+	membrane protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
VEA07505.1\|4352971_4353427_+	putative cytoplasmic protein	NA	NA	NA	NA
VEA07507.1\|4353423_4353621_+	gp12	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
VEA07509.1\|4353610_4355026_+\|tail	tail protein	A4JWK5	Burkholderia_virus	3.1e-178	67.2
VEA07511.1\|4355025_4355550_+\|tail	tail protein	Q6QIA9	Burkholderia_phage	3.1e-67	69.0
VEA07513.1\|4355601_4355919_+	Uncharacterised protein	NA	NA	NA	NA
VEA07515.1\|4356100_4358386_+\|tail	tail protein	A4JWL0	Burkholderia_virus	4.6e-67	28.8
VEA07517.1\|4358385_4359006_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	3.2e-39	53.8
VEA07519.1\|4358971_4359340_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
VEA07521.1\|4359339_4359549_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
VEA07523.1\|4359536_4360577_+	gp21	A4JWL3	Burkholderia_virus	8.8e-74	45.6
VEA07525.1\|4360586_4361099_+\|plate	baseplate protein	A0A067ZIM2	Vibrio_phage	1.2e-12	43.0
VEA07527.1\|4361064_4361226_+\|plate	baseplate protein	NA	NA	NA	NA
VEA07529.1\|4361323_4361683_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.4e-34	64.2
VEA07531.1\|4363416_4363545_+\|tail	tail protein	NA	NA	NA	NA
VEA07533.1\|4363510_4363957_+\|tail	tail protein	A0A0A7RTP0	Clostridium_phage	8.5e-34	49.6
VEA07535.1\|4364015_4364564_+	gp19	A0A0A7NV63	Enterobacteria_phage	1.4e-06	70.5
VEA07537.1\|4364576_4365092_+\|tail	tail assembly chaperone gp38	A0A0U2QV64	Escherichia_phage	8.0e-28	35.6
VEA07539.1\|4365581_4366310_+	cytoplasmic protein	A0A077SLK3	Escherichia_phage	1.6e-34	36.0

DBSCAN-SWA_15

4644869 : 4650984

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEA08038.1\|4644869_4645199_-	thioredoxin	A0A1V0SD63	Indivirus	4.2e-14	38.5
VEA08040.1\|4645342_4645807_+	ATP-dependent RNA helicase	A0A2H4UVC7	Bodo_saltans_virus	1.2e-06	32.8
VEA08042.1\|4645850_4646609_+	ATP-dependent RNA helicase	E3T5E1	Cafeteria_roenbergensis_virus	2.6e-19	33.5
VEA08043.1\|4646617_4648102_+	guanosine pentaphosphate phosphohydrolase	NA	NA	NA	NA
VEA08044.1\|4648131_4649634_-	ATP-dependent DNA helicase Rep	A7KV33	Bacillus_phage	3.8e-78	36.6
VEA08045.1\|4649630_4650155_-	ATP-dependent DNA helicase Rep	A7KV33	Bacillus_phage	8.4e-25	43.6
VEA08046.1\|4650254_4650587_-	intergral membrane NMN transport protein PnuC	A0A2I7SAC7	Vibrio_phage	5.6e-06	30.5
VEA08047.1\|4650525_4650984_-	intergral membrane NMN transport protein PnuC	A0A126HGA3	Vibrio_phage	3.2e-12	35.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134141

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection