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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134157 Escherichia coli strain NCTC11105 genome assembly, chromosome: 1 10 crisprs RT,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,WYL,DinG 0 32 23 0

Results visualization

1. LR134157
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_1 642190-642441 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_2 1000225-1001045 Unclear I-E
13 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_3 1026599-1027603 TypeI-E I-E
16 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_4 1556021-1556138 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_6 3013716-3013799 Orphan I-F
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_7 3148575-3148719 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_8 3398898-3398994 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_9 3531143-3531287 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_10 3564483-3564626 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134157_11 4092126-4092275 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134157_3 3.11|1027237|33|LR134157|PILER-CR 1027237-1027269 33 NZ_CP042584 Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence 74762-74794 0 1.0
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 NZ_CP042584 Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence 74762-74793 0 1.0
LR134157_5 5.1|2846282|40|LR134157|CRISPRCasFinder 2846282-2846321 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
LR134157_3 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT 1027543-1027574 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 1 0.969
LR134157_3 3.6|1026932|33|LR134157|PILER-CR 1026932-1026964 33 NC_004313 Salmonella phage ST64B, complete genome 32736-32768 2 0.939
LR134157_3 3.6|1026932|33|LR134157|PILER-CR 1026932-1026964 33 KU927493 Salmonella phage 118970_sal3, complete genome 70348-70380 2 0.939
LR134157_3 3.6|1026932|33|LR134157|PILER-CR 1026932-1026964 33 AY055382 Salmonella typhimurium phage ST64B complete sequence 32736-32768 2 0.939
LR134157_3 3.20|1026933|32|LR134157|CRISPRCasFinder,CRT 1026933-1026964 32 NC_004313 Salmonella phage ST64B, complete genome 32737-32768 2 0.938
LR134157_3 3.20|1026933|32|LR134157|CRISPRCasFinder,CRT 1026933-1026964 32 KU927493 Salmonella phage 118970_sal3, complete genome 70349-70380 2 0.938
LR134157_3 3.20|1026933|32|LR134157|CRISPRCasFinder,CRT 1026933-1026964 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 32737-32768 2 0.938
LR134157_2 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT 1000802-1000833 32 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3605 3 0.906
LR134157_2 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT 1000802-1000833 32 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3598 3 0.906
LR134157_2 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT 1000802-1000833 32 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21074 3 0.906
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229407-229464 3 0.948
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239901-239958 3 0.948
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230813-230870 3 0.948
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211783-211840 3 0.948
LR134157_2 2.15|1000801|33|LR134157|PILER-CR 1000801-1000833 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
LR134157_2 2.15|1000801|33|LR134157|PILER-CR 1000801-1000833 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
LR134157_2 2.15|1000801|33|LR134157|PILER-CR 1000801-1000833 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 CP031732 Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence 106828-106859 4 0.875
LR134157_3 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT 1027299-1027330 32 MF547662 Clostridioides phage LIBA6276, complete genome 37369-37400 4 0.875
LR134157_3 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT 1027299-1027330 32 MF547663 Clostridioides phage LIBA2945, complete genome 37369-37400 4 0.875
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229205-229262 4 0.931
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239699-239756 4 0.931
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230611-230668 4 0.931
LR134157_10 10.1|3564526|58|LR134157|CRISPRCasFinder 3564526-3564583 58 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211581-211638 4 0.931
LR134157_2 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT 1000802-1000833 32 KY653119 Morganella phage IME1369_02, complete genome 18217-18248 5 0.844
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 JQ288021 Salmonella phage SPN3UB, complete genome 39450-39482 5 0.848
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 MH370364 Salmonella phage S107, complete genome 29960-29992 5 0.848
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 MH370382 Salmonella phage S135, complete genome 29960-29992 5 0.848
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 MH370383 Salmonella phage S137, complete genome 29960-29992 5 0.848
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 CP053410 Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence 46319-46351 5 0.848
LR134157_3 3.12|1027298|33|LR134157|PILER-CR 1027298-1027330 33 MF547662 Clostridioides phage LIBA6276, complete genome 37368-37400 5 0.848
LR134157_3 3.12|1027298|33|LR134157|PILER-CR 1027298-1027330 33 MF547663 Clostridioides phage LIBA2945, complete genome 37368-37400 5 0.848
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 JQ288021 Salmonella phage SPN3UB, complete genome 39451-39482 5 0.844
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 MH370364 Salmonella phage S107, complete genome 29960-29991 5 0.844
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 MH370382 Salmonella phage S135, complete genome 29960-29991 5 0.844
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 MH370383 Salmonella phage S137, complete genome 29960-29991 5 0.844
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 CP053410 Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence 46320-46351 5 0.844
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 NC_014108 Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence 6021-6052 5 0.844
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 NZ_CP030922 Escherichia coli strain KL53 plasmid pKL53-S, complete sequence 5379-5410 5 0.844
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 NZ_CP038659 Citrobacter freundii strain 680 plasmid p680_1, complete sequence 372822-372853 5 0.844
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 MN699848 Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence 37054-37085 5 0.844
LR134157_3 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT 1027299-1027330 32 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 83504-83535 5 0.844
LR134157_2 2.15|1000801|33|LR134157|PILER-CR 1000801-1000833 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 MT074430 Salmonella phage pink, complete genome 39866-39898 6 0.818
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 NC_022752 Salmonella phage SETP13, complete genome 32823-32855 6 0.818
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 KY176369 Salmonella phage STP03, complete genome 33514-33546 6 0.818
LR134157_3 3.11|1027237|33|LR134157|PILER-CR 1027237-1027269 33 NC_014108 Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence 6021-6053 6 0.818
LR134157_3 3.11|1027237|33|LR134157|PILER-CR 1027237-1027269 33 NZ_CP030922 Escherichia coli strain KL53 plasmid pKL53-S, complete sequence 5379-5411 6 0.818
LR134157_3 3.11|1027237|33|LR134157|PILER-CR 1027237-1027269 33 NZ_CP038659 Citrobacter freundii strain 680 plasmid p680_1, complete sequence 372821-372853 6 0.818
LR134157_3 3.11|1027237|33|LR134157|PILER-CR 1027237-1027269 33 MN699848 Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence 37053-37085 6 0.818
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 MT074430 Salmonella phage pink, complete genome 39866-39897 6 0.812
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NC_022752 Salmonella phage SETP13, complete genome 32823-32854 6 0.812
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 KY176369 Salmonella phage STP03, complete genome 33515-33546 6 0.812
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP017294 Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence 287556-287587 6 0.812
LR134157_3 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT 1026811-1026842 32 NC_017957 Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence 469685-469716 6 0.812
LR134157_2 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT 1000681-1000711 31 MK962638 Achromobacter phage vB_AxyP_19-32_Axy21, complete genome 27366-27396 7 0.774
LR134157_2 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT 1000681-1000711 31 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 647702-647732 7 0.774
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 MT774487 Salmonella phage MG40, complete genome 21747-21779 7 0.788
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 JF974294 Aeromonas phage pIS4-A genomic sequence 3121-3153 7 0.788
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 NC_021534 Vibrio phage pYD38-A genomic sequence 22142-22174 7 0.788
LR134157_3 3.4|1026810|33|LR134157|PILER-CR 1026810-1026842 33 NC_017957 Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence 469685-469717 7 0.788
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 MT774487 Salmonella phage MG40, complete genome 21747-21778 7 0.781
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 JF974294 Aeromonas phage pIS4-A genomic sequence 3122-3153 7 0.781
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NC_021534 Vibrio phage pYD38-A genomic sequence 22142-22173 7 0.781
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP032678 Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence 278005-278036 7 0.781
LR134157_3 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT 1026811-1026842 32 NZ_CP041044 Paracoccus sp. AK26 plasmid pAK2, complete sequence 11965-11996 7 0.781
LR134157_3 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT 1027543-1027574 32 MK455769 Aeromonas phage MJG, complete genome 10369-10400 7 0.781
LR134157_2 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000376-1000407 32 NC_041912 Aquamicrobium phage P14, complete genome 25099-25130 8 0.75
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 822257-822288 8 0.75
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 CP037991 Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence 265054-265085 8 0.75
LR134157_2 2.7|1000620|32|LR134157|CRISPRCasFinder,CRT 1000620-1000651 32 NZ_CP039728 Bacillus sp. S3 plasmid unnamed, complete sequence 184222-184253 8 0.75
LR134157_2 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT 1000681-1000711 31 NZ_LR134465 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence 208628-208658 8 0.742
LR134157_2 2.12|1000924|32|LR134157|CRISPRCasFinder,CRT 1000924-1000955 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
LR134157_2 2.13|1000985|32|LR134157|CRISPRCasFinder,CRT 1000985-1001016 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 NZ_KY515226 Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence 63615-63647 8 0.758
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 NZ_CP027613 Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence 89138-89170 8 0.758
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 NC_047875 Salmonella phage UPF_BP1, complete genome 34431-34463 8 0.758
LR134157_3 3.8|1027054|33|LR134157|PILER-CR 1027054-1027086 33 NC_018454 Cronobacter phage phiES15, complete genome 8780-8812 8 0.758
LR134157_3 3.8|1027054|33|LR134157|PILER-CR 1027054-1027086 33 JQ780327 Cronobacter phage phiES15, complete sequence 8780-8812 8 0.758
LR134157_3 3.14|1027420|33|LR134157|PILER-CR 1027420-1027452 33 NZ_CP013415 Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence 218852-218884 8 0.758
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_KY515226 Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence 63616-63647 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP027613 Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence 89139-89170 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 KY749247 Salmonella enterica subsp. enterica serovar Paratyphi B plasmid R1, complete sequence 6605-6636 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NC_047875 Salmonella phage UPF_BP1, complete genome 34431-34462 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP020854 Klebsiella pneumoniae strain KPN528 plasmid pKPN528-1, complete sequence 219120-219151 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP020848 Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence 308963-308994 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP012754 Klebsiella pneumoniae strain KP617 plasmid KP-p1, complete sequence 136398-136429 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP031736 Klebsiella pneumoniae subsp. pneumoniae strain Klebsiella pneumoniae plasmid pKPM502, complete sequence 165927-165958 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP031818 Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence 239058-239089 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP028791 Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence 15259-15290 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP026172 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence 212209-212240 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP039526 Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence 14232-14263 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP008933 Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence 27946-27977 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP004000 Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence 145037-145068 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP026398 Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence 22241-22272 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP020068 Klebsiella pneumoniae strain AR_0068 plasmid unitig_1, complete sequence 121446-121477 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP028929 Klebsiella pneumoniae strain AR_0153 plasmid unnamed1, complete sequence 29623-29654 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP016921 Klebsiella pneumoniae isolate 11 plasmid pIncHI1B_DHQP1300920, complete sequence 196979-197010 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP034681 Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence 14194-14225 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 CP050156 Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence 98867-98898 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP022612 Klebsiella pneumoniae strain CDC 0106 plasmid unnamed1, complete sequence 328710-328741 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NC_016980 Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence 257026-257057 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP020902 Klebsiella pneumoniae strain K66-45 plasmid pK66-45-1, complete sequence 318754-318785 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_AP018748 Klebsiella pneumoniae strain KP33 plasmid pKP3301, complete sequence 254185-254216 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP024507 Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence 28253-28284 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP032208 Klebsiella pneumoniae strain AR_0109 plasmid unnamed2, complete sequence 247615-247646 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP006799 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid p1, complete sequence 147479-147510 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 MK649825 Klebsiella pneumoniae strain BA813 plasmid pBA813_1, complete sequence 14189-14220 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_MK413723 Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence 117411-117442 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_MK413721 Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence 117046-117077 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_MK191024 Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence 14193-14224 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP014776 Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence 43102-43133 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_MG288682 Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence 14232-14263 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP025462 Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence 56836-56867 8 0.75
LR134157_3 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT 1026628-1026659 32 NZ_CP034406 Klebsiella pneumoniae strain NH34 plasmid pNH34.1, complete sequence 106307-106338 8 0.75
LR134157_3 3.22|1027055|32|LR134157|CRISPRCasFinder,CRT 1027055-1027086 32 NC_018454 Cronobacter phage phiES15, complete genome 8781-8812 8 0.75
LR134157_3 3.22|1027055|32|LR134157|CRISPRCasFinder,CRT 1027055-1027086 32 JQ780327 Cronobacter phage phiES15, complete sequence 8781-8812 8 0.75
LR134157_3 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT 1027421-1027452 32 NZ_CP013415 Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence 218852-218883 8 0.75
LR134157_2 2.2|1000315|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000315-1000346 32 KU686197 Synechococcus phage S-CAM3 isolate 0808SB25, complete genome 123678-123709 9 0.719
LR134157_2 2.2|1000315|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000315-1000346 32 KU686199 Synechococcus phage S-CAM3 isolate 1010CC42, complete genome 123684-123715 9 0.719
LR134157_2 2.2|1000315|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000315-1000346 32 KU686198 Synechococcus phage S-CAM3 isolate 0910TB04, complete genome 123668-123699 9 0.719
LR134157_2 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000376-1000407 32 NZ_CP011506 Burkholderia pyrrocinia strain DSM 10685 plasmid p2327, complete sequence 33839-33870 9 0.719
LR134157_2 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000437-1000468 32 KC821604 Cellulophaga phage phiST, complete genome 62088-62119 9 0.719
LR134157_2 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000437-1000468 32 KC821621 Cellulophaga phage phi19:2, complete genome 62096-62127 9 0.719
LR134157_2 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000437-1000468 32 HQ634192 Cellulophaga phage phiST genomic sequence 16808-16839 9 0.719
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NC_021623 Borrelia hermsii strain HS1 plasmid lp174, complete sequence 4388-4419 9 0.719
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NZ_CP014350 Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence 4514-4545 9 0.719
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 MK250029 Prevotella phage Lak-C1, complete genome 109932-109963 9 0.719
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 MK250016 Prevotella phage Lak-A1, complete genome 149385-149416 9 0.719
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 MK250019 Prevotella phage Lak-A2, complete genome 72432-72463 9 0.719
LR134157_2 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT 1000681-1000711 31 MN224564 Streptomyces phage Araceli, complete genome 8349-8379 9 0.71
LR134157_2 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT 1000681-1000711 31 NZ_CP011667 Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence 178017-178047 9 0.71
LR134157_2 2.9|1000741|32|LR134157|CRISPRCasFinder,CRT 1000741-1000772 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 4515488-4515519 9 0.719
LR134157_3 3.1|1026627|33|LR134157|PILER-CR 1026627-1026659 33 KY749247 Salmonella enterica subsp. enterica serovar Paratyphi B plasmid R1, complete sequence 6604-6636 9 0.727
LR134157_3 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT 1026811-1026842 32 NC_041877 Pseudomonas phage SM1, complete genome 55912-55943 9 0.719
LR134157_3 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT 1026811-1026842 32 JQ067090 UNVERIFIED: Pseudomonas phage PaMx31, partial genome 80025-80056 9 0.719
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 57083-57114 9 0.719
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 NZ_CP045296 Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence 238917-238948 9 0.719
LR134157_3 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT 1027299-1027330 32 MN693584 Marine virus AFVG_25M163, complete genome 29591-29622 9 0.719
LR134157_3 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT 1027299-1027330 32 MN103543 Pseudomonas phage vB_PaeM_PS119XW, complete genome 258501-258532 9 0.719
LR134157_3 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT 1027299-1027330 32 MK599315 Pseudomonas phage PA1C, complete genome 257887-257918 9 0.719
LR134157_3 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT 1027421-1027452 32 NZ_CP014797 Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence 208455-208486 9 0.719
LR134157_3 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT 1027543-1027574 32 NC_047954 Pseudomonas phage Njord, complete genome 11435-11466 9 0.719
LR134157_2 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000376-1000407 32 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 398736-398767 10 0.688
LR134157_2 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000376-1000407 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 2728156-2728187 10 0.688
LR134157_2 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000437-1000468 32 KT997872 Uncultured Mediterranean phage uvDeep-CGR2-AD8-C175, complete genome 10204-10235 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NZ_CP041068 Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence 15222-15253 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 CP041516 Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence 38867-38898 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NC_019506 Clostridium phage phiCP13O, complete genome 20539-20570 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NC_019508 Clostridium phage phiCP34O, complete genome 20153-20184 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 JF767208 Clostridium phage phi13O, complete genome 20539-20570 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 GQ443085 Clostridium phage CP26F, complete genome 20369-20400 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 JF767210 Clostridium phage phi9O, complete genome 20774-20805 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 JF767209 Clostridium phage phi34O, complete genome 20153-20184 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NC_011318 Clostridium phage 39-O, complete genome 19873-19904 10 0.688
LR134157_2 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT 1000498-1000529 32 NC_019496 Clostridium phage phiCP26F, complete genome 20369-20400 10 0.688
LR134157_2 2.7|1000620|32|LR134157|CRISPRCasFinder,CRT 1000620-1000651 32 NZ_KM406416 Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence 35146-35177 10 0.688
LR134157_2 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT 1000802-1000833 32 MF158039 Shigella phage Sf12, complete genome 4975-5006 10 0.688
LR134157_2 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT 1000802-1000833 32 MF158042 Shigella phage Sd1, complete genome 938-969 10 0.688
LR134157_3 3.12|1027298|33|LR134157|PILER-CR 1027298-1027330 33 MN693584 Marine virus AFVG_25M163, complete genome 29590-29622 10 0.697
LR134157_3 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT 1026811-1026842 32 NZ_CP021821 Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence 385935-385966 10 0.688
LR134157_3 3.21|1026994|32|LR134157|CRISPRCasFinder,CRT 1026994-1027025 32 NZ_CP027239 Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence 55281-55312 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 19612-19643 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 115804-115835 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 116173-116204 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 182725-182756 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 110105-110136 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 109122-109153 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 221496-221527 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 207469-207500 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 199664-199695 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 13581-13612 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 73431-73462 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 187798-187829 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 106322-106353 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 148086-148117 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 93116-93147 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 185318-185349 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 219648-219679 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 158306-158337 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 93116-93147 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 167798-167829 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_002305 Salmonella typhi plasmid R27, complete sequence 128806-128837 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 91681-91712 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 183046-183077 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 37794-37825 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 36345-36376 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 124973-125004 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 184389-184420 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 94449-94480 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 26677-26708 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 182833-182864 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 183156-183187 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 183101-183132 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 197454-197485 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 205427-205458 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 191663-191694 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 49708-49739 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 126184-126215 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 93117-93148 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 181554-181585 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 182609-182640 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 182936-182967 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 182670-182701 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 183046-183077 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 182572-182603 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 180358-180389 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 176026-176057 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 130052-130083 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 182677-182708 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 182461-182492 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 41577-41608 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 203153-203184 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 109234-109265 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 20553-20584 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 58755-58786 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 179219-179250 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 194749-194780 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 146284-146315 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 176467-176498 10 0.688
LR134157_3 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT 1027116-1027147 32 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 45801-45832 10 0.688
LR134157_3 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT 1027238-1027269 32 LR134122 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2 259269-259300 10 0.688
LR134157_3 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT 1027421-1027452 32 NZ_CP041349 Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence 27173-27204 10 0.688
LR134157_3 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT 1027421-1027452 32 NZ_CP041350 Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence 149091-149122 10 0.688
LR134157_3 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT 1027421-1027452 32 NZ_CP004365 Komagataeibacter xylinus E25 plasmid pGX5, complete sequence 172655-172686 10 0.688
LR134157_3 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT 1027543-1027574 32 NC_047894 Pseudomonas phage uligo, complete genome 11353-11384 10 0.688
LR134157_9 9.1|3531186|59|LR134157|CRISPRCasFinder 3531186-3531244 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
LR134157_2 2.15|1000801|33|LR134157|PILER-CR 1000801-1000833 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
LR134157_2 2.15|1000801|33|LR134157|PILER-CR 1000801-1000833 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667
LR134157_3 3.24|1027177|32|LR134157|CRISPRCasFinder,CRT 1027177-1027208 32 MT344105 Acinetobacter phage fLi-Aba03, complete genome 32699-32730 11 0.656
LR134157_3 3.24|1027177|32|LR134157|CRISPRCasFinder,CRT 1027177-1027208 32 MT344104 Acinetobacter phage fLi-Aba02, complete genome 32861-32892 11 0.656
LR134157_3 3.24|1027177|32|LR134157|CRISPRCasFinder,CRT 1027177-1027208 32 MT344103 Acinetobacter phage fEg-Aba01, complete genome 31614-31645 11 0.656
LR134157_9 9.1|3531186|59|LR134157|CRISPRCasFinder 3531186-3531244 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814

1. spacer 3.11|1027237|33|LR134157|PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
gtcatgaatatggggaaaacgaacaatctgttt	Protospacer
*********************************

2. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

3. spacer 5.1|2846282|40|LR134157|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

4. spacer 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

5. spacer 3.6|1026932|33|LR134157|PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 2, identity: 0.939

ctgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
ccgatcacatcatgtttatccgcggtcgtattg	Protospacer
*.*****************.*************

6. spacer 3.6|1026932|33|LR134157|PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 2, identity: 0.939

ctgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
ccgatcacatcatgtttatccgcggtcgtattg	Protospacer
*.*****************.*************

7. spacer 3.6|1026932|33|LR134157|PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 2, identity: 0.939

ctgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
ccgatcacatcatgtttatccgcggtcgtattg	Protospacer
*.*****************.*************

8. spacer 3.20|1026933|32|LR134157|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 2, identity: 0.938

tgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
cgatcacatcatgtttatccgcggtcgtattg	Protospacer
.*****************.*************

9. spacer 3.20|1026933|32|LR134157|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 2, identity: 0.938

tgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
cgatcacatcatgtttatccgcggtcgtattg	Protospacer
.*****************.*************

10. spacer 3.20|1026933|32|LR134157|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 2, identity: 0.938

tgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
cgatcacatcatgtttatccgcggtcgtattg	Protospacer
.*****************.*************

11. spacer 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

12. spacer 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

13. spacer 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

14. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

15. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

16. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

17. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

18. spacer 2.15|1000801|33|LR134157|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

19. spacer 2.15|1000801|33|LR134157|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

20. spacer 2.15|1000801|33|LR134157|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

21. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.875

--agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
ataccagcc--tgccggtagagcctggtgatggt	Protospacer
  * *****  ********* *************

22. spacer 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** * 

23. spacer 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** * 

24. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

25. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

26. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

27. spacer 10.1|3564526|58|LR134157|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

28. spacer 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

29. spacer 3.1|1026627|33|LR134157|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 5, identity: 0.848

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgatgaaatg	Protospacer
*************************.*** .  

30. spacer 3.1|1026627|33|LR134157|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 5, identity: 0.848

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgatgaaatg	Protospacer
*************************.*** .  

31. spacer 3.1|1026627|33|LR134157|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 5, identity: 0.848

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgatgaaatg	Protospacer
*************************.*** .  

32. spacer 3.1|1026627|33|LR134157|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 5, identity: 0.848

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgatgaaatg	Protospacer
*************************.*** .  

33. spacer 3.1|1026627|33|LR134157|PILER-CR matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.848

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgccggatgagtgg	Protospacer
*********************** *.***  * 

34. spacer 3.12|1027298|33|LR134157|PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 5, identity: 0.848

gtacagtttccataaattcacctcgtttatata-	CRISPR spacer
ctactgtttccataaattcacctc-cttataaaa	Protospacer
 *** ******************* .***** * 

35. spacer 3.12|1027298|33|LR134157|PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 5, identity: 0.848

gtacagtttccataaattcacctcgtttatata-	CRISPR spacer
ctactgtttccataaattcacctc-cttataaaa	Protospacer
 *** ******************* .***** * 

36. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 5, identity: 0.844

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .  

37. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 5, identity: 0.844

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .  

38. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 5, identity: 0.844

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .  

39. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 5, identity: 0.844

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .  

40. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgccggatgagtgg	Protospacer
********************** *.***  * 

41. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

42. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

43. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

44. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

45. spacer 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cctataaaa	Protospacer
*** ******************* ..**** * 

46. spacer 2.15|1000801|33|LR134157|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

47. spacer 3.1|1026627|33|LR134157|PILER-CR matches to MT074430 (Salmonella phage pink, complete genome) position: , mismatch: 6, identity: 0.818

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgaagaaatg	Protospacer
*************************. ** .  

48. spacer 3.1|1026627|33|LR134157|PILER-CR matches to NC_022752 (Salmonella phage SETP13, complete genome) position: , mismatch: 6, identity: 0.818

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgaagaaatg	Protospacer
*************************. ** .  

49. spacer 3.1|1026627|33|LR134157|PILER-CR matches to KY176369 (Salmonella phage STP03, complete genome) position: , mismatch: 6, identity: 0.818

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagtgccggtagtgcctgaagaaatg	Protospacer
*************************. ** .  

50. spacer 3.11|1027237|33|LR134157|PILER-CR matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 6, identity: 0.818

gtcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
atcatgaatatggcgaaaatgaacaatcagcct	Protospacer
.************ *****.******** *..*

51. spacer 3.11|1027237|33|LR134157|PILER-CR matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 6, identity: 0.818

gtcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
atcatgaatatggcgaaaatgaacaatcagcct	Protospacer
.************ *****.******** *..*

52. spacer 3.11|1027237|33|LR134157|PILER-CR matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 6, identity: 0.818

gtcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
atcatgaatatggcgaaaatgaacaatcagcct	Protospacer
.************ *****.******** *..*

53. spacer 3.11|1027237|33|LR134157|PILER-CR matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 6, identity: 0.818

gtcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
atcatgaatatggcgaaaatgaacaatcagcct	Protospacer
.************ *****.******** *..*

54. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to MT074430 (Salmonella phage pink, complete genome) position: , mismatch: 6, identity: 0.812

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgaagaaatg	Protospacer
************************. ** .  

55. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NC_022752 (Salmonella phage SETP13, complete genome) position: , mismatch: 6, identity: 0.812

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgaagaaatg	Protospacer
************************. ** .  

56. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to KY176369 (Salmonella phage STP03, complete genome) position: , mismatch: 6, identity: 0.812

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgaagaaatg	Protospacer
************************. ** .  

57. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP017294 (Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

--agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gtaccggcc--tgccggtagtgcctgatgatcgt	Protospacer
  * *.***  ***************.**** **

58. spacer 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 6, identity: 0.812

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
gggtgatgcgcggtatcgaccagcaggctgat	Protospacer
 ******************.*****  * * *

59. spacer 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT matches to MK962638 (Achromobacter phage vB_AxyP_19-32_Axy21, complete genome) position: , mismatch: 7, identity: 0.774

cgaccacgcagagcggcgacaacctgacgtt--	CRISPR spacer
tgagcacgcagagcggcgacaact--acatcaa	Protospacer
.** *******************.  **.*.  

60. spacer 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.774

-cgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
ttgatc-cgcagagcggcgacaacccggcggc	Protospacer
 .**.* ******************.*.** .

61. spacer 3.1|1026627|33|LR134157|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 7, identity: 0.788

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gcccagccagtgccggtagtgcctgatgaaatg	Protospacer
*  **********************.*** .  

62. spacer 3.1|1026627|33|LR134157|PILER-CR matches to JF974294 (Aeromonas phage pIS4-A genomic sequence) position: , mismatch: 7, identity: 0.788

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gcgcagccagcgccggtagtgccgggtaaatgg	Protospacer
* ********.************ ***.*  * 

63. spacer 3.1|1026627|33|LR134157|PILER-CR matches to NC_021534 (Vibrio phage pYD38-A genomic sequence) position: , mismatch: 7, identity: 0.788

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gcgcagccagcgccggtagtgccgggtaaatgg	Protospacer
* ********.************ ***.*  * 

64. spacer 3.4|1026810|33|LR134157|PILER-CR matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 7, identity: 0.788

gcggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
cgggtgatgcgcggtatcgaccagcaggctgat	Protospacer
  ******************.*****  * * *

65. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 7, identity: 0.781

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cccagccagtgccggtagtgcctgatgaaatg	Protospacer
  **********************.*** .  

66. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to JF974294 (Aeromonas phage pIS4-A genomic sequence) position: , mismatch: 7, identity: 0.781

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgccggtagtgccgggtaaatgg	Protospacer
 ********.************ ***.*  * 

67. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NC_021534 (Vibrio phage pYD38-A genomic sequence) position: , mismatch: 7, identity: 0.781

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgccggtagtgccgggtaaatgg	Protospacer
 ********.************ ***.*  * 

68. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 7, identity: 0.781

--agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
attccggcc--tgccggtagagcctggtgattgt	Protospacer
    *.***  ********* ********** **

69. spacer 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP041044 (Paracoccus sp. AK26 plasmid pAK2, complete sequence) position: , mismatch: 7, identity: 0.781

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
aggcgatgcgcggcatcgatcagccgtcggat	Protospacer
 **.*********.**********  .*** *

70. spacer 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   * 

71. spacer 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_041912 (Aquamicrobium phage P14, complete genome) position: , mismatch: 8, identity: 0.75

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
tcatcatgattcccgaggacgtgctgtccctg	Protospacer
  *********** ** ********* * * .

72. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 8, identity: 0.75

ccatgactataaaagcttatattttgataaat	CRISPR spacer
gcaggacaataaaagcttatatttggggatag	Protospacer
 ** *** **************** *. * * 

73. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccatga-ctataaaagcttatattttgataaat	CRISPR spacer
-aataatctataaaaccttatatttttatatta	Protospacer
  **.* ******** ********** ***   

74. spacer 2.7|1000620|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP039728 (Bacillus sp. S3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtccgtcaaagaggaagccaaagccatgca	CRISPR spacer
gctcatttgaacgaggaagccaaaaccatgca	Protospacer
** . . * ** ************.*******

75. spacer 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 8, identity: 0.742

cgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
ccgtcgcgcagatcggcgacgacctgacgcc	Protospacer
* ..*.****** *******.********..

76. spacer 2.12|1000924|32|LR134157|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **  

77. spacer 2.13|1000985|32|LR134157|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **  

78. spacer 3.1|1026627|33|LR134157|PILER-CR matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 8, identity: 0.758

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagcgccggtagtgcctccagaaaag	Protospacer
**********.*************   ** .. 

79. spacer 3.1|1026627|33|LR134157|PILER-CR matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagccagcgccagtagtgcctgatagttac	Protospacer
**********.***.**********.*..* ..

80. spacer 3.1|1026627|33|LR134157|PILER-CR matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 8, identity: 0.758

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gagcagtcagcgccggtagtgcctgaggaaatc	Protospacer
******.***.**************. ** . .

81. spacer 3.8|1027054|33|LR134157|PILER-CR matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.758

gatccgccgccggttaacgctggaccagttccg	CRISPR spacer
ggcgtggccccggttaacgctggacacgttccg	Protospacer
*.. .* * ****************  ******

82. spacer 3.8|1027054|33|LR134157|PILER-CR matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.758

gatccgccgccggttaacgctggaccagttccg	CRISPR spacer
ggcgtggccccggttaacgctggacacgttccg	Protospacer
*.. .* * ****************  ******

83. spacer 3.14|1027420|33|LR134157|PILER-CR matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.758

gccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gaatctacaggccgtgacggttgtcatggaggc	Protospacer
*     *****************.*** *** *

84. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagcgccggtagtgcctccagaaaag	Protospacer
*********.*************   ** .. 

85. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagcgccagtagtgcctgatagttac	Protospacer
*********.***.**********.*..* ..

86. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to KY749247 (Salmonella enterica subsp. enterica serovar Paratyphi B plasmid R1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagcgtctgcgaacgca	Protospacer
******************.*.***  .*.*  

87. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagtcagcgccggtagtgcctgaggaaatc	Protospacer
*****.***.**************. ** . .

88. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP020854 (Klebsiella pneumoniae strain KPN528 plasmid pKPN528-1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

89. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP020848 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

90. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP012754 (Klebsiella pneumoniae strain KP617 plasmid KP-p1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

91. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP031736 (Klebsiella pneumoniae subsp. pneumoniae strain Klebsiella pneumoniae plasmid pKPM502, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

92. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP031818 (Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

93. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

94. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP026172 (Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

95. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP039526 (Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

96. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP008933 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

97. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP004000 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

98. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP026398 (Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

99. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP020068 (Klebsiella pneumoniae strain AR_0068 plasmid unitig_1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

100. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP028929 (Klebsiella pneumoniae strain AR_0153 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

101. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP016921 (Klebsiella pneumoniae isolate 11 plasmid pIncHI1B_DHQP1300920, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

102. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

103. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to CP050156 (Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

104. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP022612 (Klebsiella pneumoniae strain CDC 0106 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

105. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NC_016980 (Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

106. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP020902 (Klebsiella pneumoniae strain K66-45 plasmid pK66-45-1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

107. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_AP018748 (Klebsiella pneumoniae strain KP33 plasmid pKP3301, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

108. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP024507 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

109. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP032208 (Klebsiella pneumoniae strain AR_0109 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

110. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP006799 (Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

111. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to MK649825 (Klebsiella pneumoniae strain BA813 plasmid pBA813_1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

112. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MK413723 (Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

113. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MK413721 (Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

114. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MK191024 (Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

115. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP014776 (Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

116. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

117. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP025462 (Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

118. spacer 3.15|1026628|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP034406 (Klebsiella pneumoniae strain NH34 plasmid pNH34.1, complete sequence) position: , mismatch: 8, identity: 0.75

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

119. spacer 3.22|1027055|32|LR134157|CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

120. spacer 3.22|1027055|32|LR134157|CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

121. spacer 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

122. spacer 2.2|1000315|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 9, identity: 0.719

tcactgtatacccaactattggagatcatgta	CRISPR spacer
caactgtatacgaaactattggagacccagat	Protospacer
. *********  ************.*  *  

123. spacer 2.2|1000315|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 9, identity: 0.719

tcactgtatacccaactattggagatcatgta	CRISPR spacer
caactgtatacgaaactattggagacccagat	Protospacer
. *********  ************.*  *  

124. spacer 2.2|1000315|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 9, identity: 0.719

tcactgtatacccaactattggagatcatgta	CRISPR spacer
caactgtatacgaaactattggagacccagat	Protospacer
. *********  ************.*  *  

125. spacer 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011506 (Burkholderia pyrrocinia strain DSM 10685 plasmid p2327, complete sequence) position: , mismatch: 9, identity: 0.719

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
ctgtccggattccggacgttgtgctggcgccg	Protospacer
  .**  *********** .********** .

126. spacer 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to KC821604 (Cellulophaga phage phiST, complete genome) position: , mismatch: 9, identity: 0.719

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
catcaacaaaatattgatgatcaaaattcatt	Protospacer
*..*.    ***********.*** *******

127. spacer 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to KC821621 (Cellulophaga phage phi19:2, complete genome) position: , mismatch: 9, identity: 0.719

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
catcaacaaaatattgatgatcaaaattcatt	Protospacer
*..*.    ***********.*** *******

128. spacer 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to HQ634192 (Cellulophaga phage phiST genomic sequence) position: , mismatch: 9, identity: 0.719

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
catcaacaaaatattgatgatcaaaattcatt	Protospacer
*..*.    ***********.*** *******

129. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * **** 

130. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * **** 

131. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*  

132. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*  

133. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*  

134. spacer 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT matches to MN224564 (Streptomyces phage Araceli, complete genome) position: , mismatch: 9, identity: 0.71

cgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
agaccacgcagacgggcgacaaccccaacaa	Protospacer
 ***********  **********. *    

135. spacer 2.8|1000681|31|LR134157|CRISPRCasFinder,CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 9, identity: 0.71

cgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
tcaccccgcagagcggcgacgacctcttcgt	Protospacer
. *** **************.****  .  *

136. spacer 2.9|1000741|32|LR134157|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

ctatagcagcactccaccagctcgagcagcag	CRISPR spacer
cgggtgtgtcactcgaccagctccagcagcag	Protospacer
* .  *.. ***** ******** ********

137. spacer 3.1|1026627|33|LR134157|PILER-CR matches to KY749247 (Salmonella enterica subsp. enterica serovar Paratyphi B plasmid R1, complete sequence) position: , mismatch: 9, identity: 0.727

gagcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cagcagccagtgccggtagcgtctgcgaacgca	Protospacer
 ******************.*.***  .*.*  

138. spacer 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT matches to NC_041877 (Pseudomonas phage SM1, complete genome) position: , mismatch: 9, identity: 0.719

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
ccgcaatgcgcggtatcgcgcagcatccttgc	Protospacer
* *..*************  ********   .

139. spacer 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT matches to JQ067090 (UNVERIFIED: Pseudomonas phage PaMx31, partial genome) position: , mismatch: 9, identity: 0.719

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
ccgcaatgcgcggtatcgcgcagcatccttgc	Protospacer
* *..*************  ********   .

140. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatatcacccagcactccggg	Protospacer
  *  ******************** ** .  

141. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** ********* 

142. spacer 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
ggggatatctataaactcacctcgtttatatt	Protospacer
 . ..* **.*****.*************** 

143. spacer 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

144. spacer 3.26|1027299|32|LR134157|CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

145. spacer 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************    

146. spacer 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.    

147. spacer 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
gcgaggacattccggccgccgtgctggcgcgc	Protospacer
* .  .  ******* ** ************ 

148. spacer 2.3|1000376|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
gggcgatgattccggccgaggtgctggccatc	Protospacer
*... ********** *** ********    

149. spacer 2.4|1000437|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to KT997872 (Uncultured Mediterranean phage uvDeep-CGR2-AD8-C175, complete genome) position: , mismatch: 10, identity: 0.688

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
gttagcattaatattgttgtccaatataccag	Protospacer
  . ************ ** ******* *   

150. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** ********** 

151. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** ********** 

152. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_019506 (Clostridium phage phiCP13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

153. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_019508 (Clostridium phage phiCP34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

154. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to JF767208 (Clostridium phage phi13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

155. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to GQ443085 (Clostridium phage CP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

156. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to JF767210 (Clostridium phage phi9O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

157. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to JF767209 (Clostridium phage phi34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

158. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_011318 (Clostridium phage 39-O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

159. spacer 2.5|1000498|32|LR134157|PILER-CR,CRISPRCasFinder,CRT matches to NC_019496 (Clostridium phage phiCP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

160. spacer 2.7|1000620|32|LR134157|CRISPRCasFinder,CRT matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtccgtcaaagaggaagccaaagccatgca	CRISPR spacer
taaacaatcgaagaggaagccaaaaccatgac	Protospacer
  . * .**.**************.*****  

161. spacer 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   .. 

162. spacer 2.10|1000802|32|LR134157|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   .. 

163. spacer 3.12|1027298|33|LR134157|PILER-CR matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 10, identity: 0.697

gtacagtttccataaattcacctcgtttatata	CRISPR spacer
aggggatatctataaactcacctcgtttatatt	Protospacer
. . ..* **.*****.*************** 

164. spacer 3.18|1026811|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
gcctgatgcgcggtatcgagaagcatgttgac	Protospacer
   ****************  ***** . * .

165. spacer 3.21|1026994|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggaattgttatgctgttcccctgaccg	CRISPR spacer
tcttcggaattgccatgctgttccccttccat	Protospacer
  . ********..*************  *  

166. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

167. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

168. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

169. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

170. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

171. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

172. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

173. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

174. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

175. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

176. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

177. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

178. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

179. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

180. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

181. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

182. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

183. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

184. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

185. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

186. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

187. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

188. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

189. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

190. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

191. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

192. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

193. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

194. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

195. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

196. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

197. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

198. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

199. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

200. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

201. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

202. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

203. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

204. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

205. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

206. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

207. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

208. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

209. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

210. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

211. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

212. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

213. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

214. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

215. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

216. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

217. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

218. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

219. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

220. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

221. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

222. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

223. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

224. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

225. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

226. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

227. spacer 3.23|1027116|32|LR134157|CRISPRCasFinder,CRT matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .  

228. spacer 3.25|1027238|32|LR134157|CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

229. spacer 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*  

230. spacer 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*  

231. spacer 3.28|1027421|32|LR134157|CRISPRCasFinder,CRT matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*  

232. spacer 3.30|1027543|32|LR134157|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .    

233. spacer 9.1|3531186|59|LR134157|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

234. spacer 2.15|1000801|33|LR134157|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   .. 

235. spacer 2.15|1000801|33|LR134157|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   .. 

236. spacer 3.24|1027177|32|LR134157|CRISPRCasFinder,CRT matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

237. spacer 3.24|1027177|32|LR134157|CRISPRCasFinder,CRT matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

238. spacer 3.24|1027177|32|LR134157|CRISPRCasFinder,CRT matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

239. spacer 9.1|3531186|59|LR134157|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 23583 : 77458 53 Escherichia_phage(36.36%) transposase NA
DBSCAN-SWA_2 97565 : 106408 13 Morganella_phage(33.33%) NA NA
DBSCAN-SWA_3 196767 : 266383 59 Escherichia_phage(50.0%) tRNA,protease,transposase NA
DBSCAN-SWA_4 441211 : 449772 10 uncultured_Caudovirales_phage(33.33%) tRNA NA
DBSCAN-SWA_5 837949 : 844988 8 Shigella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_6 1034967 : 1048148 13 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_7 1228505 : 1276924 52 Escherichia_phage(55.56%) protease,tRNA,lysis,tail,holin,integrase attL 1249825:1249841|attR 1275070:1275086
DBSCAN-SWA_8 1444256 : 1466579 30 Enterobacteria_phage(83.33%) tRNA,integrase,tail attL 1450181:1450200|attR 1465446:1465465
DBSCAN-SWA_9 1684629 : 1694073 11 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_10 1705704 : 1754493 47 Stx2-converting_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_11 1825500 : 1851032 29 Escherichia_phage(50.0%) integrase,transposase attL 1843310:1843324|attR 1851450:1851464
DBSCAN-SWA_12 1884332 : 1913740 37 Escherichia_phage(25.0%) integrase,transposase attL 1893915:1893929|attR 1915144:1915158
DBSCAN-SWA_13 1924604 : 1971484 45 Escherichia_phage(25.0%) tRNA,integrase,transposase attL 1915542:1915556|attR 1948278:1948292
DBSCAN-SWA_14 2261198 : 2331135 86 Escherichia_phage(31.43%) protease,portal,lysis,terminase,transposase,tail,integrase attL 2288431:2288447|attR 2344025:2344041
DBSCAN-SWA_15 2432040 : 2482773 59 Escherichia_phage(35.71%) transposase NA
DBSCAN-SWA_16 2492943 : 2500214 9 Diachasmimorpha_longicaudata_entomopoxvirus(33.33%) tRNA NA
DBSCAN-SWA_17 2704193 : 2717615 19 Enterobacteria_phage(38.46%) terminase NA
DBSCAN-SWA_18 2721697 : 2729449 13 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_19 2863774 : 2892276 36 Shigella_phage(25.0%) protease,integrase,transposase,tail attL 2879875:2879934|attR 2891351:2891415
DBSCAN-SWA_20 2979007 : 3019207 46 Enterobacteria_phage(48.65%) tRNA,protease,tail NA
DBSCAN-SWA_21 3118087 : 3147091 33 Enterobacteria_phage(50.0%) lysis,integrase,transposase,tail attL 3132992:3133006|attR 3147165:3147179
DBSCAN-SWA_22 3342242 : 3393485 52 Enterobacteria_phage(42.11%) protease,lysis,transposase,tail,integrase attL 3375941:3375987|attR 3389750:3389796
DBSCAN-SWA_23 3596061 : 3674764 84 Shigella_phage(44.44%) holin,integrase,transposase,tail attL 3658299:3658358|attR 3670849:3670908
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage