Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| LR134167 | Avibacterium volantium strain NCTC3438 genome assembly, chromosome: 1 | 1 crisprs | DEDDh,DinG,cas3,csa3 | 0 | 2 | 2 | 0 |
1. LR134167
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LR134167_2 | 1540473-1540612 | Orphan |
NA
Consensus repeat of LR134167_2
|
1 spacers
spacers of LR134167_2
>2.1|1540522|42|LR134167|CRISPRCasFinder TCTCCTTATCTCTTGCGGGAATAGCTCAGTTGGTAGAGCACA |
DEDDh |
CRISPR arrays and Neighbor proteins around LR134167_2
The CRISPR arrays of LR134167_2 >merge|LR134167|2|1540473-1540612|CRISPRCasFinder ACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCAATCTCCTTATCTCTTGCGGGAATAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCAA >LR134167|2|1|1540473-1540612|CRISPRCasFinder ACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCAA TCTCCTTATCTCTTGCGGGAATAGCTCAGTTGGTAGAGCACA ACCTTGCCAAGGTTGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCAA
>LR134167.1|VEB24433.1|1539763_1540312_+|Oligoribonuclease MQLDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAIHQPDSLLAKMNAWCQKTHSENGLIERVKQSKLTERAAELQTLDFLKKWVPKGASPICGNSVAQDKRFLFKYMPELADYFHYRHLDVSTLKELGSRWNPEMLKGFSKKNTHLALDDIRESIAELAYYREHFIKMP >LR134167.1|VEB24431.1|1538627_1539683_-|Putative-ribosome-biogenesis-GTPase-RsgA MSKQKLTYNQQRRIRSNNAKTLQRHKSRNDDIQWQDEMLGPTQEGTVVTRYSLHADVENEQGEIFRCNLRRTLANLVVGDRVLWRKGSEQLQGVSGVIEAIHPRKNEITRPDYYDGLKVIAANIDRIIIVSAVVPELSWNIVDRYLVVCENAKIPAVIVINKADLLSETQRAAVEKQLKVYEKIGYQTLMISAKTGENMQNLTALLSQGTSIFVGQSGVGKSSLINSILPDVNAQVGAVSEGTGLGRHTTTSSRLYHLPQGGDLIDSPGIREFGLWHLDADQITKGYREFQYVLGTCKFRDCKHLNDPGCALREAVEQGKIDPVRFKNYHNLIESLSETKGHRHFFTQDNG >LR134167.1|VEB24429.1|1538149_1538407_-|Phosphocarrier-protein-HPr MYSKDVEIIAPNGLHTRPAAQFVKEAKAFASDITVTSGGKSASAKSLFKLQTLGLTQGTVITISAEGEDEQKAVDHLVALIPTLE >LR134167.1|VEB24427.1|1536323_1538051_-|Phosphoenolpyruvate-protein-phosphotransferase MISGIPASPGIVFGKALVLKEEKIVLDTQKIQDDQVEAEVARFYQGRNAAVEQLTAIKDRAYASLGEDKAAIFEGHLMILEDEELEEEIIDYLRSNKVNAGVAASTIIDQQVAMLSEIDDEYLKERAGDIRDIGNRLIKNILGMHIVDLGEINEEAILVAYDLTPSETAQLNLDKVLGFITDIGGRTSHTSIMARSLELPAIVGTNTVTQQVNTGDFLILDAVNNRVYVNPSQEEIDRLKALEAQLAEEKAELAKLKDLPALTLDGHRVDVVANIGTIRDVEGADRNGAEGVGLYRTEFLFMDRDQLPTEEEQFIAYKEVVEAMNGRLVVLRTMDIGGDKELPYLNLPKEMNPFLGWRAIRIALDRKEILHAQLRAVLRASAFGKLAVMFPMIISVEEIRTLKAEIEVLKAQLRNEGKAFDENIQIGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNELISHLYNPMTPSVLSLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNYQDAKLLADKALEQPTAADIEKLVADFLAENALN >LR134167.1|VEB24425.1|1535760_1536261_-|Glucose-specific-phosphotransferase-enzyme-IIA-component MGFFDKLFGSKSNKTVEVEIYAPLSGDIVNIEDVPDVVFSEKIVGDGIAIRPTGNKLVAPVDGVVGKIFETNHAFSMESTDGVELFVHFGIDTVELKGEGFRRVAEEGQTVKRGDTIIELDLELLEAKAKSVLTPVVISNMDEISHIEKKTGEVVAGESVVLVVKK >LR134167.1|VEB24423.1|1532823_1535487_-|Pyruvate-dehydrogenase-E1-component MSEMLRNDVDPVETNDWLLAIDSVIREEGVERAQFIIEQLMQHARANSVSLPTGVTTDYINTIPVEEEPNYPGNLDLERRIRSAIRWNAIMMVLRASKKDLELGGHMSSFQSSATIYEVCFNHFFKARTEKNGGDLVFFQGHISPGIYARAFVEGRLTEEQLDNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPLNAIYQARFLKYLHNRGLKDTADQTVYAFLGDGEMDEVESRGGLAFAAREKLDNLVFVINCNLQRLDGPVTGNGKIIQELEAQFNGCGWEVIKVVWGRRWDRLLQRDTSGKLLQLMMEVVDGDYQTFKAKDGAYVRKHFFGRYPETEALVAEMTDDEIWALNRGGHDPLKVFAAFNKAKQVKDKPVVLLVKTIKGYGMGDAAEGKNIAHQVKKMDMSGVKHVRDRFNIAVSDEDIEKLPYIKFEEGSEEYKYLHERRQALNGYLPTRAPRFTHELEVPALEEFAQLFEAQSRPISTTMAFVRSLNVLLKNKSVGKHIVPIIADEARTFGMEGLFRQIGIYNPHGQNYTPQDREQVSYYREAIDGQVLQEGINEQGATASWIAAATSYSTNNVPMIPFFVYYSMFGFQRVGDLMWLAGDQRARGFMIGGTSGRTTLNGEGLQHEDGQSHIQSAVIPNCISYDPAFAFEVPVIIQDGVRRMYGPEQEDVYYYITTLNETYDQPAMPKGAEEGIRKGIYKFETVTGQGKGKVQLLGSGAILRHVREAAKLLADDFGVTSDVYSVTSFTEVARDGADVERWNLLHPEAEPRTAYIAQVMNDAPAVAATDYIKLYAEQVRAFVPAQSYRVLGTDGFGRSDSRENLREHFEVNAHYVVIAALTELVKQGIFDKKVVADAIAKYGIDADKINPLYA >LR134167.1|VEB24421.1|1530888_1532772_-|Dihydrolipoyllysine-residue-acetyltransferase-component-of-pyruvate-dehydrogenase-complex MAKEIQIPDIGGDEVTVTEVMVKAGDTVEVDQSVINVEGDKASMEVPSPEAGVIKEVLVKVGDKVSTGTPMFILEGAAAAPAPAAEEKAAAPAAPQSAGGSVIEIHVPDIGGDEVNVTEILVNVGDSVAEEQSILNVEGDKASMEVPAPVAGVVKEILIKVGDKVSTGSLVMKFETTAAAPAAEAPAAPAAVSGGVQDVHVPDIGGDEVNVTEIMVAVGDSVSEEQSLITVEGDKASMEVPAPFAGVVKEILVKSGDKVSTGSLIMRFEVAGSAPAAAPAAQPAATAPAQTQAAAPAAPVQSAQPANQAEVTASASFAHATPVVRRLAREFGVNLDKVKGTGRKGRILKEDVQAYVKAAVKAVESGSVSAASTGAANGAGLGLLPWPKVDFSKFGEVEQVELGRIQKISGANLHRNWVMIPHVTQWDKADITDLEQFRKEQNVLAEKQKLDVKITPLVFIMKAVAKALEAYPRFNSSLSEDAQSLILKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELAEISKKARAGKLTASDMQGGCFTISSLGGIGGTQFTPIVNAPEVAILGVSKSEMTPVWNGKEFTPRLMLPLSLSYDHRVIDGADGARFITFINGVLSDLRRLVM >LR134167.1|VEB24419.1|1529377_1530802_-|Dihydrolipoyl-dehydrogenase MNKEIKTQVVVLGAGPAGYSAAFRCADLGLDTVIVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKSLAEHGIVFGEPQTDIDKIRGWKEKVINQLTGGLAGMAKMRKVQVVNGYGKFSGPNTIIVAGDEGETTIHFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALKLKEVPKNLLIMGGGIIGLEMGTVYHALGSNIDVVEMFDQVIPAADKDIVQIYTKRIEKKFNLLLETKVTAVEAKEDGIYVSMEGKAANETRRYDAVLVAIGRTPNGKLIDANVAGVEVDDRGFIHTDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGQKHYFNPKVIPSIAYTEPEVAWVGKTEKECKAEGINYEVAKFPWAASGRAIASDCADGLTKLIFDKDTHRIIGGAIVGTNGGELLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKKK >LR134167.1|VEB24417.1|1527500_1529186_-|Uncharacterized-symporter-yidK MFLTVFSFIIVTGFVAWISWRKTRNDDLSTAKGYFLAGRGLSAVVIGCSMVLTSLSTEQLIGVNANSYKGNFSIIAWTVQSVIPLCFLALYLLPKYIRNGYTTIPEFFESRFDRQTRLIMSGLFLVFYLFIVIPTALYTGAIAFNKIFNLETVFGISYGESIVYTVMAIGFIGAIYAIFGGLKAVAVSDTANAIILIIGAILVPIFALIYLGNGSFMEGLHIIGTTHVEKFNAIGSATDAVPWPAMFTGILIVNFFYWTTNQAIVQRALGAKDLKAGQKGILIAALFLLLLPIILNLPGLLSFHILGEGLNPIDLSYPELVNRVLPTVLQGFFIAALFGAILSTFNSFLNSAATIYCKDLLPSLTKRTFSETELIVYAKKVSAVMAVITIIIGPLLMFGTDGIFLLTKRFAGFVNIPIVALFAVGLFNKTVSGLAARIALLVHVILYFLIVWVFNVKVNFVYVMAALFVFDVVLMLVLGSFLRRKTPYVDNVSNQSNVDLSNWEYVNITVASLALGLVSLYALLSPIGLASENGKPLWVLAAYAILQVILFVVIGRNKKKV >LR134167.1|VEB24415.1|1526048_1527497_-|Arylsulfatase MKNVIYILLDQVRKDMLGTYGHKIVKTPNLDRLAREGVRFDNAFTPASVCGPARTSLFTGQMPSTHGIIRNGEKGGTGEIPVEQPHIGKLDGYNCYVAGKWHVGTRSVPRDYGIKGHNFDGYGYPGSHVYKNLVFDQAPTQPNRYPEWLAEKGFPTPEVSLAYFGDNPHLRVQELCGLLSGTKEQTIPYFIIDEAKSFILESLAEHKPFFTWINFWGPHTPCIVPEPYYSMYDPKDVVLDESFFKPLEGKPGHYRTISKMWGMWEASEERWKEVITKFWGYITLIDDAIGELFDFLEKHNLYQDCFIVATADHGDAMGAHRMIEKGEFMFDTTYNIPLIIKDPESSRINEVDDNLVYLHDLTSTVFDVAGQAVPETFQGESLLPILRENKSNDRKGVLAQLAGHFVYFEQRMWRRKDYKLVFNASDVGELYDVLNDPEELQNLFYDPDYRLIKKEMLEEMRAEMQRLKDPLENWVYRIINEI >LR134167.1|VEB24435.1|1540876_1543483_-|DNA-topoisomerase-1 MSKSLVIVESPAKAKTINKYLGKDYIVKSSVGHICDLPTAGMSTGEKAKAISTKGLSPEEKQAIKQEKERNALVKRMGIDPYHDWKANYQILPGKEKVVAELKSLAKKADHIYLATDLDREGEAIAWHLREVIGGDDDRFSRVVFNEITKNAITQAFEHPEHLNMDRVNAQQTRRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEVAVQTETAQKIGLRLDVTSFKGKKFEPKNAQQAQSAVDFLQKSDYIVSDLETKPTSSKPKAPFITSTLQQTASTRLNFGVKKTMMLAQRLYEAGYITYMRTDSTNLSKDALNMVRDYIGSNYGDAYLPAKPNFYSSKDNAQEAHEAIRPSDVRVLAADVQGMDKDAVRLYDLIWRQFVACQMPAAQYDSSTLTVTAGDYGLKAKGRILRFDGWTKVLPPMSKSAEDQVLPAVAVNDQLNLKEVIPQQHFTKPPARFTEAALVKELEKRGIGRPSTYAAIISTIQDRGYVRVENRRFYAEKMGEIVTDRLNQSFTDLMNYDFTANMEDVLDQIANGEKNWKAELNQFFKDFSAQLSQAELDELEGGMKPNSLVLTDIKCPTCGRPMAIRTASTGVFLGCSGYALPPKERCKTTINLIPEAELLNVLDEASETKALMDRKRCPKCGTAMDSYIIDPQRKLYVCGNNPNCDGYVVEQGEFKIKGYDGPVVECDKCGADMHLKLGRFGKYMACIQCDNTRKILKNGEVAPPKEEPVHFPELKCENSDAYFVLRDGASGVFMSAHNFPKSRETRAAKVAELALYRDRLPEKLQYLADAPQKDPEGNEAIVRFSRKEKRQYITSEKNGKATKWRADYIDGKWVENGK >LR134167.1|VEB24437.1|1543584_1544490_+|D-malate-degradation-protein-R MDKLNAISVFCKVVETQSFTQTAIQQNISVAMASKLVSQLEEQLKTRLLQRTTRKIVPTEAGLLYYQRCQPILAELQDAEASISNLASALQGKLHISVPRDFGLRFIAPNLGLFLHANPDLEVDIEFNDRLVDLITEGFDLALRIGNLQDSSLVAKKIASSTMHIVGSPDYFAKKGIPQTPEELYQHKIMLYKSNNNQVFWEFINGTRIERLRVQADVMCNSGLALAELAKSGLGIVNLPRFLIENELASGELVEVLADYPQHQIDMNIVYPHRRHLAAKVKAFVDFLSQLGLCQETASNK >LR134167.1|VEB24439.1|1544580_1546446_-|Protease-4 MKSLMKLGSMLWRGLNFVRNVVMNLVFLVFVLFLFAVVSLLTNANKEAQAPLSADEGALLLNLDGYLADNREEIHSLQDLLKEVDSQYVPRQISTFDLVYSIRSAVNDPRIKGLVLDLNRFEGADLPAIKYVGKAINQFKQSGKPVIAYADSYTQKQYVLASYADEIYLNPIGAVEIQGLALENLYYKDLLDKLKITPHIFRVGTYKSAVEPFLRNDMSAEARANMQRWLSTMWTDYKTLIANNREIPADNVLPEAEQYFANLKALNGDLTAYAQQQKFVTQLADRFTLEQKLTALFGKNAEGKAKLLPFDRYLADLPDRIEGEGKTRIAVVNVEGAIIDGETDDNGVGGDTIATLLRQAYEDEKIKAVILRVNSPGGSAFASEIIRQEIVHLQQAGKPVVVSMGAMAASGGYWISSTADYILADADTITGSIGIFAMFPTFEKAVAEIGVNADGVATSPLSKQSAFSGISKVKSDLYQLEIEQGYDKFLSLVSKGRQLAKTDVDKIAQGQVWLGSEALQNKLVDELGDFDRAVEKAKELAKAKQSEQSSEEFSVEWLIERNDSMLDALVKSFGKGAQQQLFSALGLAKPFNEVKQQLNQLSQFNDPKGQYLYCINCGTLR >LR134167.1|VEB24441.1|1546641_1546875_+|Uncharacterised-protein MLNLFKRPIEVETLEAWAKMVEDIAKVAILAVPVIIFGQNGILFKIASSFTLMFVAYATLLVGKQLRKLKPKLSKGD >LR134167.1|VEB24443.1|1546875_1546983_+|Uncharacterised-protein MELTIGLLVLLAVVLAFGAGINHAAKEADKESKKN >LR134167.1|VEB24445.1|1547096_1547651_+|Putative-NAD(P)H-nitroreductase-ydjA MDALTLLTSRRSNKKLFAPAPNQAQLEQIFQAALHVPDHGRLQPYRFVVIEKDGLNKLGGLLKSAVQELNLGEERLKKAENLPNRAPMIIAVIAKIQKDIAKVPAWEQMLTAGCATYAMQLAANAQGFDNVWVTGPWVDGSELRQALQCDQNDKVVAFIMLGTGEEKANREPKQIDLANFVSYL >LR134167.1|VEB24447.1|1547715_1549164_-|tRNA-sulfurtransferase MKFIIKLFPEIMIKSESVRKRFIKILTGNIRNILNKYDDTVAVVKHWDYIEVRSKNAENRALLIELLGRIPGIHHFLEVEEKPFNSVQDIFQQTLQDVAHLLENKTFCVRVKRKGKHDFSSLDVERYVGGGLNQHIASAKVKLSKPDVTVRIDIEDDKMMLVKARHTGLGGYPIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGAAHEIGVKQMAYHIWNRFSGSHKVRFVAINFEPVVAEILEKIDNGQMGVVLKRMMVRAASKVAERFGIQAIVTGEALGQVSSQTLTNLRLIDEAADALVLRPLITHDKEQIIAMAKEIGTDDIAKSMPEFCGVISKNPTVKAVREKILSEENHFDFSVLESAVQNAQYLDIRQIAEQTEKEVVEVDTISVLGENDIVIDIRSPEETDENPLELAGQAVRLIPFYKLSSLFPDLDQSKNYVLYCERGVMSKLQALYLKENGFGNVRVFRK >LR134167.1|VEB24449.1|1549397_1549646_+|Exodeoxyribonuclease-7-small-subunit MARKPTTDENSLDFETTLTQLESIVARLESGELPLEQALKDFESGIKLAQLGQARLQQAEQRIQILLSKSDKAELSDYQNNE >LR134167.1|VEB24451.1|1549671_1550562_+|Farnesyl-diphosphate-synthase MYQFAQDLQQLQQRINQFLEQQFEQIDTQPSPLAEAMKYALLLGGKRVRPFLVYATGRMLGAELVHLDYAAAGIEAIHAYSLVHDDLPAMDNDALRRGHPTCHIAFDEATAILAGDALQAFAFELLSQTPNLSAEQRLALVAELAKASGVQGMCLGQSLDLQAEHQQVSLTELERIHRNKTGALLRCALKMGFLCSPHFADKQLCQQLERYADAIGLAFQVQDDILDIEGESDVIGKTVGADLAADKSTYPKLLGLQGAKEKAQELHQQALDALAKLPFDSSPLKALSEFIVTRKN >LR134167.1|VEB24453.1|1550637_1552497_+|1-deoxy-D-xylulose-5-phosphate-synthase MEKYPLLSLINSPDDLRLLNKDQLPQLCNELRGYLLESVSQSSGHLASGLGTVELTVALHYVFNTPFDQLIWDVGHQAYPHKILTGRRDKMSTIRQKDGLHPFPWRDESEFDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENVGALNNYLARLFSGSFYSTLREGGKKILSGVPPIKEFVKKTEEHVKGFVSPIGTMFEELGFNYIGPIDGHNVDELISTLKNMSSLKGPQFLHIKTKKGKGYAPAEQDPIGFHGVPKFDPTSGKLPKSTTPTYSQIFGNWLCEMAEQDPKLIGITPAMREGSGMVEFSNRFPQQYFDVAIAEQHAVTFAAGLAIAGFKPVVAIYSTFLQRAYDQVIHDVAIQNLPVLFAIDRAGVVGADGQTHQGAFDISFMRCIPNLVIMTPSDENECRQMLYTGYQCGKPAAVRYPRGNAIGVKLEPLAILPLGKGKIVRQGKNIAILNFGTLLANAKTVAENLNATLVDMRFVKPIDEALILQLAENHSLLVTLEENAIQGGAGSAVAEVLNSQPKTTALLQLGLPDFFIPQGTQQEILADLKLDAQGIEEQITTFLQKSKKI |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|---|
| LR134167_1 | 1.1|142526|31|LR134167|CRT | 142526-142556 | 31 | NZ_CP045391 | Roseivivax sp. THAF30 plasmid pTHAF30_b, complete sequence | 34905-34935 | 5 | 0.839 |
| LR134167_1 | 1.1|142526|31|LR134167|CRT | 142526-142556 | 31 | NZ_CP045363 | Roseivivax sp. THAF40 plasmid pTHAF40_c, complete sequence | 2333-2363 | 5 | 0.839 |
| LR134167_1 | 1.1|142526|31|LR134167|CRT | 142526-142556 | 31 | AP018486 | Mycobacterium phage PP DNA, complete genome | 7374-7404 | 7 | 0.774 |
| LR134167_1 | 1.1|142526|31|LR134167|CRT | 142526-142556 | 31 | MF403008 | Agrobacterium phage Atu_ph07, complete genome | 342115-342145 | 8 | 0.742 |
| LR134167_1 | 1.1|142526|31|LR134167|CRT | 142526-142556 | 31 | NZ_CP022107 | Halobacillus halophilus strain HL2HP6 plasmid pHL2HP62 sequence | 13533-13563 | 9 | 0.71 |
| LR134167_1 | 1.1|142526|31|LR134167|CRT | 142526-142556 | 31 | NC_017669 | Halobacillus halophilus DSM 2266 plasmid PL16, complete sequence | 12249-12279 | 9 | 0.71 |
| LR134167_1 | 1.50|146297|31|LR134167|CRT | 146297-146327 | 31 | NZ_CP010886 | Vibrio parahaemolyticus strain CHN25 plasmid P2, complete sequence | 33049-33079 | 10 | 0.677 |
1. spacer 1.1|142526|31|LR134167|CRT matches to NZ_CP045391 (Roseivivax sp. THAF30 plasmid pTHAF30_b, complete sequence) position: , mismatch: 5, identity: 0.839
gtctccgg-tttcgcctttgtctccggtttcg CRISPR spacer -tttcgggctttcgccttcgtctccgctttcg Protospacer *.** ** *********.******* *****
2. spacer 1.1|142526|31|LR134167|CRT matches to NZ_CP045363 (Roseivivax sp. THAF40 plasmid pTHAF40_c, complete sequence) position: , mismatch: 5, identity: 0.839
gtctccgg-tttcgcctttgtctccggtttcg CRISPR spacer -tttcgggctttcgccttcgtctccgctttcg Protospacer *.** ** *********.******* *****
3. spacer 1.1|142526|31|LR134167|CRT matches to AP018486 (Mycobacterium phage PP DNA, complete genome) position: , mismatch: 7, identity: 0.774
gtctccggtttcgcctttgtctccggtttcg CRISPR spacer atctccggtgtcgcctttgtcccccttgtca Protospacer .******** ***********.** * **.
4. spacer 1.1|142526|31|LR134167|CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 8, identity: 0.742
gtctccggtttcgcctttgtctccggtttcg CRISPR spacer atctccggtatcgcctttggctccttttgga Protospacer .******** ********* **** ** .
5. spacer 1.1|142526|31|LR134167|CRT matches to NZ_CP022107 (Halobacillus halophilus strain HL2HP6 plasmid pHL2HP62 sequence) position: , mismatch: 9, identity: 0.71
gtctccggtttcgcctttgtctccggtttcg CRISPR spacer ccgaacagtttcgccatcgtctccggtttca Protospacer . *.******** *.************.
6. spacer 1.1|142526|31|LR134167|CRT matches to NC_017669 (Halobacillus halophilus DSM 2266 plasmid PL16, complete sequence) position: , mismatch: 9, identity: 0.71
gtctccggtttcgcctttgtctccggtttcg CRISPR spacer ccgaacagtttcgccatcgtctccggtttca Protospacer . *.******** *.************.
7. spacer 1.50|146297|31|LR134167|CRT matches to NZ_CP010886 (Vibrio parahaemolyticus strain CHN25 plasmid P2, complete sequence) position: , mismatch: 10, identity: 0.677
atcgccagtcaagcctttatcaccagcctca CRISPR spacer tatatgcttcaagacttcatcaccagcctca Protospacer ... ***** ***.*************
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
2000008 : 2005669
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >LR134167|2000008:2005669|DBSCAN-SWA ATTACAACCGCACTTTCTCTCCGCCGAAATCGTCCAATAAATTGGACGTTAATTTAGTAAGAATCCCTGTCATCAACACAAAATCGGCATCAAAGCGTTGCGCCACATCTTCTTTCAAAATATCGTCATTTTTTTCCCGCACTTCATCGGCAAACTTCAAGCGTTTTAAGGTGCCGTCTTCATTTAATACAAAGGTGAGATGCGCTTCCCATTCCAAAGCCAATTTGGTGATGGTTTTGCCAGATTGCAATAATGACAGAATTTCTTCCGCATCTAAGGCTTGCTGTTTGCAACGGATCACGGCGTTATCTTCACTGCCACGTAATTCGGCATCTTCCAATACAATCAACCAATCTGGTGTGGCATCATTGCTCACCCAATGACTCATTACTAAACTTGGATCATTGGCAAAAGCCAGCGGCACAACAGGCAGAGAGCCTAAGGATTTACGCAATAGTGCAAGGGCGTCCTCAGCACGCTTGCTTGAAGCCGCATCGACATAAACGAGCTGATTTTCACTATCCACCCAAATTGCCGTTTGCTGATATTTACTAAAGGCACGCGGTAGCAACATTGCCACCACATCGTCTTTCAGCGCTTGCTTTTCCACTTTCTTCAATTTGCGATTTTCTTTTTGCTCTAAATCAGCAATCCGCTGATCTAATTCGCGTTTTACAACGTGAGCAGGCAGGATCTTTTCTTCTTTGCGAGCCATTAATAAAATCTGTTTGCCCACCGAAAAATGTAACAACTCACTGGTTTTCAACGGTGAAACCCAACCAAATTTCTGCATATCCCCTTGACCACAAGGGTGAAACTCACATTGTGCAAGCTGTGCTTGCAACTGCTCGGCTGACCAATCTAATTCTTTAGTTAAACGATAGGTCATAACGTTCTTAAACCACATAGGCATTCCTTCTTTATTCGGGTAAAATGTGCCAACGAAAAACCTATTGTAACTGATCTTAAACAAAACTATGCAACAGAAATTAATTACTTTCATCGGCGGCGGAAATATGGCGCAAGCCATTGTGTTTGGTTTATTGAAACAGGGGTATCCTGCGCAAAAAATTACCGTTAGCGATCCGAATACGGATAAATTGGCGTTGTTTGCTGAGCGTCAAGTGAATATTTCGCAAGATAATGTGCAAGCGGTACAAAATGCCGAAGTGGTGGTGTTAGCGGTGAAGCCACAAGCGCTTGTGGAAGTGTGTCAGCCTTTAAGTGCGGTGGATTTTTCTGAAAAATTAGTGATCTCCATTGCGGCGGCAATTTCTGTGCAAAAACTTACCGCACTTTTGCCTAGCGCGCGCCATATTATCCGCGTAATGCCGAATACGCCAGCCTTGGTATCGGAAGGAATGGCAGGTTTATTTGCGGAACACAATGTGCCAGCCGATCTCAAAGCCTTCGCACAAGATTTAATGAGTGCCGTAGGGCAATCTTGTTGGGTTGATCAAGAAGATGAAATGCACTTGATTACCGCCGGTTCTGGCAGCAGCCCCGCATATTTTTTCTTATTTATGGAAGCAATGGAAAACGCCTTGAAAGCGCTTAATTTAGATGCACACACCGCACGAATGTTAGTGCAACAATCGGCGCTTGGGGCAGCCAAAATGGTGCAACAACAGCCTGATGTGGCCATTTCGACCTTGCGTGAAAATGTAACATCAAAAGGCGGCACAACAGCGGCAGCGCTTAATGTTTTCCAGCAACAACAATTATCCCAAACTGTACAGCAAGCCATTGAAGCCTGCGTGCAACGTTCACAAGAAATGGAAAAATTATTTTGATGAAAATCAGCCCTTTTAATTGGTTAGCCTTGAGCTTTTTCGGCTATTACTGCGCCTATGGTGTGTTTGTGCCATTTTTCCCCGCGTGGTTGAAATCGCAATCTTACAACGAAGAAATCATCGGCTTTATTATTGCCAGTTCTTATGTTTTCCGCTTTTTAGGTGGGATCGTTTTCTCCGCAATGATTAAAAAAGCAGGGCATTTGCTCAATGCCTTACGGTATCTCGCTTGGGCAAGCTGTGGCGTAATGCTTTATATGAGCTTTGTGGCGGAAAGCTTCCCCTTGCTTTGCCTTGGTATAGCCTTATTTGCGATGATTAATGCGGCAGGAATGCCGTTAAGTGATACTCTTGCAACAACTTGGCAACAGCAAATTAATTTGGATTATGGCAAAGCGCGATTGATTGGCTCAGCCGCGTTTGTGGTAGGCGTTACGCTGTTTGGCAACATTATTGGTTTTATTGGTGAGAATTATACGGTATGGATTTTAACCGTATTGTTAGCCCTTTATGCCATAATGCAAATGACCACACCGAAGATTTTGCCACAAGATACGCAGACAAGTGCGGTGGAAAATTCTGTTGGATTTTTGCAGTTATTAAAAAATAAATGCACGTTACGTTTAATTATTGCCATTTCTCTTATTCAAGGTTCGCACGCCGCTTATTATGCTTATAGCGTGCTATATTGGCAAAGCATTGGCATTTCTGTGCAGACAACCAGCTTACTGTGGGGATTAAGCGTGGTGGCGGAAATCTTGCTCTTTTTCTTTTCCACCAAATTATTCCGTTTCTGGAAAGTCAGCACCTTGTTTTACTGTGCCGCCATCGCTTGTGTGGTACGTTGGGGCGTGTTAGGCAGTGCGACAAGCCTTTGGCTAATTGCCTTAGTGCAATTATTGCACAGCTTAACTTATGCCCTTGGTCATTACGCAATGGTGCGTTACATCACCACGCAACCACAAAATACAATGGCGAAATTGCAAGGCTTGTATAACGGCATTTCAGGCTCAGCAGTGATCGCCTTGCTTACCGCATTGGCTGGCGTGTTATACCCAATTTCCCCACAAATGGCATTTACGTCAATGATGATTTTTGCTTTGCTCGCATTGCCGATTATTCCGCGTAAAGTGGAAGCCTTTTTAGTGCGCCGAGTAGAATAGGACGTTGAATAGGGAACAGAATAGGATTAACAATGAAAGACAGTGCCTTAATCGATCTTTTTCTGAATGAACAATGGCTAGAAAAAGGGCTTTCGGAGAATACCATTCAATCCTACCGCTTGGATCTCAGTGCGGTGGCAAATTGGCTCGAAACGCAGAATCTCACCTTTGAAACCTTAGATGCCATTGATCTGCAAAGCTTTCTTGGTGAGCGATTGAACTTGGGCTACAAAGCCACAAGTACAGCAAGATTATTGAGCGCGTTGCGTAAATTTTTTCAATATTTATATCGGGAGAAATATCGCACAGACGACCCAAGTGCGGTGCTAACTTCGCCAAAATTACCGAGCCGATTGCCCAAATATCTCACCGAACAGCAGGTTACGGATTTGCTCAACACCCCCTGCGTGGAAGTGCCGTTAGAATTACGCGATAAAGCAATGCTGGAATTGCTTTACGCCACAGGTTTACGGGTTACCGAGCTGGTTTCACTCACCCTTGACAACATCAGCGTGCAACAAGGTGTGGTGCGTGTCATCGGCAAAGGCAACAAAGAACGCATTGTACCAATGGGCGAAGAAGCCGCCTATTGGATCAAACAATTTATGCTTTATGGCAGAGCCGCATTGCTAGACGGACAGCCTTCAGACGTGCTATTTCCCAGTCGGCGCGGCACTCAAATGACTCGCCAAACCTTTTGGCACCGCATTAAACATTACGCCATTTTAGCGGATATTGACAGCGAAGCACTCTCCCCCCACGTCCTACGCCACGCCTTCGCCACTCACTTAGTCAACCACGGCGCAGATCTACGCGTGGTACAAATGCTCTTAGGACACAGCGATCTCTCCACCACCCAAATCTACACCCACGTCGCCAAAGAACGCTTAAAACACTTGCACGAAAGGTATCACCCAAGGGGGTAAAATTTGTGAAAAAACGACCGCACTTTAAAAAGTGCGGTGTTTTTTTTATCAAATTTTATTCAATCCCAATCAGCTTGTGCGTTTGAATGCTCAACTGCCATTTCGGTTTATTTGGGCGTTGGTTTAGTAAGCCTAACTGTGTGATGGTGTGGAGCAAATTCATTTCGCCGTTGTTTTCACAAGGGGAAAGGTAGTAATGCTGCGCTTGAATCTGGCTTTCGATTAACGCACAAAATTCTTGCACATCGGCATCTGCCACAATGCGAACTTCGTTAGCTTGCGTAATGCAGCGTTGGCGATATTTCTGCGCATATTCTCGTTTTGGACTGGTGGCAATATAATCAATTTGTGCAGGGACAGGCTTTAATCCATTGGTTTCAATGGCAAGAAAATAGCCCTCTGCCTTAAGTTGATCAAGCAATAAGCCCAGCTGTGGCTGAATGGTGGGTTCGCCACCCGTGATGATAATATTTTTTGCCGAAAACGACCGCACTTTAGCTAGGATTTGCTGTAACGACCACGGTTCAAAATCATTGTAGGGCGTATCACACCAAGGGCAAGCCAAGTTGCATTTGCCGAAGCGGATAAAAATGCTCGGCATTCCTGTATTTGCCCCTTCTCCTTGCAGGCTTTGGAAAATTTCTACAATGGGATAGCTTGGATTAGAAATTAATTCAGCCATTAATCTTCCCGATATTCACAAAATGAAGTAGGCGTTTCCCACAAGCGAATGGCGCTAATCGGCAAGTGTTCACTTAAGCGTTGAAAAATAAAGCGTGCCATTTCTTCTGCGGTGGTGCGAGTAGGCATTGCAAAGGTTTTGGAATTGAGATCTTGCAATAGCCGTGCAATTTGACTTTCTCGCTCGCTGGTTTCATCATAAATAAAGGCGTGATCCATTGGGGTGAGAATCTGTTCTTTTACGATCTGTTTGAGATCCGAAAAATCTATCACCATTCCTTTTTTTGCTCCGCTGGCGTGTAGTTCCCCTTGCACTTCCACTTGTAATTTATAAGTGTGGCCGTGCAGGTTTTGGCATTTGCCATCGTGTCCGTCCAACAAATGCGCCATATCAAAACTGAATTCTTTAGAAACTTTAAACATTTTGCACCGCACTTTTTTGTTGTAAATATTCGTCTAAACCTTTATTGCGCAATACGCAGCTTGGACATTCGCCACAACCACCGTCCACGCCCTGATAACAAGTGTGCGTATGATTGCGAACATAATCTAGCGCACCTAGGCTATCTGCTAACGCCCAAGTTTGCGCTTTGGTGAGATACATCAACGGCGTGCGAAGATTAAAATTGTAATCCATCGCTAAATTCAGGGTAACGTTCATTGATTTGATGAACACATCACGGCAATCAGGGTAGCCACTGAAATCCGTTTCGCACACGCCAGTGATAATGTCAGAAATACCTTGCCCTTTGGCATAAATGGCGGTGTAAAGCAAAAATAAGGCGTTACGCCCGTCCACAAAGGTGTTTGGCAGCTCATCTTTTTCTTGCTTGATTTCTGCATTTTCGTTCATTAGAGCATTTGAGGTGATCGCTTTGATCACAGAAGTATCAATGAAAGTTTGTTTTACCCCAAGATCTTGCGCGATCCATTTGGCTTTTTCTAATTCAATGGCGTGGCGCTGACCATAATGAAAGGTTACGGTTTCCACATTTTCTACGCCATAATCGGCAATGGCTTGAATTAAACAGGTGGTGGAATCTTGTCCACCAGAAAAGATAACAACCGCTTTGCGATTGTGATTTTTGAATGTTGTCAT
Protein sequences of DBSCAN-SWA_1 >LR134167|2000008:2005669|2000008_2000914_-|VEB25065.1|DBSCAN-SWA MWFKNVMTYRLTKELDWSAEQLQAQLAQCEFHPCGQGDMQKFGWVSPLKTSELLHFSVGKQILLMARKEEKILPAHVVKRELDQRIADLEQKENRKLKKVEKQALKDDVVAMLLPRAFSKYQQTAIWVDSENQLVYVDAASSKRAEDALALLRKSLGSLPVVPLAFANDPSLVMSHWVSNDATPDWLIVLEDAELRGSEDNAVIRCKQQALDAEEILSLLQSGKTITKLALEWEAHLTFVLNEDGTLKRLKFADEVREKNDDILKEDVAQRFDADFVLMTGILTKLTSNLLDDFGGEKVRL >LR134167|2000008:2005669|2001799_2002963_+|VEB25067.1|DBSCAN-SWA MKISPFNWLALSFFGYYCAYGVFVPFFPAWLKSQSYNEEIIGFIIASSYVFRFLGGIVFSAMIKKAGHLLNALRYLAWASCGVMLYMSFVAESFPLLCLGIALFAMINAAGMPLSDTLATTWQQQINLDYGKARLIGSAAFVVGVTLFGNIIGFIGENYTVWILTVLLALYAIMQMTTPKILPQDTQTSAVENSVGFLQLLKNKCTLRLIIAISLIQGSHAAYYAYSVLYWQSIGISVQTTSLLWGLSVVAEILLFFFSTKLFRFWKVSTLFYCAAIACVVRWGVLGSATSLWLIALVQLLHSLTYALGHYAMVRYITTQPQNTMAKLQGLYNGISGSAVIALLTALAGVLYPISPQMAFTSMMIFALLALPIIPRKVEAFLVRRVE >LR134167|2000008:2005669|2004985_2005669_-|VEB25071.1|DBSCAN-SWA MTTFKNHNRKAVVIFSGGQDSTTCLIQAIADYGVENVETVTFHYGQRHAIELEKAKWIAQDLGVKQTFIDTSVIKAITSNALMNENAEIKQEKDELPNTFVDGRNALFLLYTAIYAKGQGISDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYNFNLRTPLMYLTKAQTWALADSLGALDYVRNHTHTCYQGVDGGCGECPSCVLRNKGLDEYLQQKSAVQNV >LR134167|2000008:2005669|2003944_2004571_-|VEB25069.1|DBSCAN-SWA MAELISNPSYPIVEIFQSLQGEGANTGMPSIFIRFGKCNLACPWCDTPYNDFEPWSLQQILAKVRSFSAKNIIITGGEPTIQPQLGLLLDQLKAEGYFLAIETNGLKPVPAQIDYIATSPKREYAQKYRQRCITQANEVRIVADADVQEFCALIESQIQAQHYYLSPCENNGEMNLLHTITQLGLLNQRPNKPKWQLSIQTHKLIGIE >LR134167|2000008:2005669|2004570_2004993_-|VEB25070.1|DBSCAN-SWA MFKVSKEFSFDMAHLLDGHDGKCQNLHGHTYKLQVEVQGELHASGAKKGMVIDFSDLKQIVKEQILTPMDHAFIYDETSERESQIARLLQDLNSKTFAMPTRTTAEEMARFIFQRLSEHLPISAIRLWETPTSFCEYRED >LR134167|2000008:2005669|2000984_2001800_+|VEB25066.1|DBSCAN-SWA MQQKLITFIGGGNMAQAIVFGLLKQGYPAQKITVSDPNTDKLALFAERQVNISQDNVQAVQNAEVVVLAVKPQALVEVCQPLSAVDFSEKLVISIAAAISVQKLTALLPSARHIIRVMPNTPALVSEGMAGLFAEHNVPADLKAFAQDLMSAVGQSCWVDQEDEMHLITAGSGSSPAYFFLFMEAMENALKALNLDAHTARMLVQQSALGAAKMVQQQPDVAISTLRENVTSKGGTTAAALNVFQQQQLSQTVQQAIEACVQRSQEMEKLF >LR134167|2000008:2005669|2002995_2003889_+|VEB25068.1|DBSCAN-SWA MKDSALIDLFLNEQWLEKGLSENTIQSYRLDLSAVANWLETQNLTFETLDAIDLQSFLGERLNLGYKATSTARLLSALRKFFQYLYREKYRTDDPSAVLTSPKLPSRLPKYLTEQQVTDLLNTPCVEVPLELRDKAMLELLYATGLRVTELVSLTLDNISVQQGVVRVIGKGNKERIVPMGEEAAYWIKQFMLYGRAALLDGQPSDVLFPSRRGTQMTRQTFWHRIKHYAILADIDSEALSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKHLHERYHPRG |
7 | Salmonella_phage(16.67%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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| DBSCAN-SWA_2 |
2035600 : 2040803
Sequences of DBSCAN-SWA_2
Nucleotide sequences of DBSCAN-SWA_2 >LR134167|2035600:2040803|DBSCAN-SWA CTTAATCCATTGCATAGCCTGCATTTGGCAGGCATTTGCCATCTAAATAGGCGCTGCCATTTTGAAGCGTTAAACGATCGGTAACAAACCATTTAATCACTAAAGGATAAATTTGCTGCTCTTGATATTTCACGCGCTGCTCAATATCACTGACTTCATCATCTGGAAAAATTGGCACTTTGGCTTGCAGCACGATCGCACCACCGTCCACTTCTTCATTGACAAAATGCACCGTTGTACCGTGCTCTTGCTCACCTGCGGCTAAAGCTCGTTGGTAAGTATCTAAGCCGGGATATTTCGGCAATAATGAAGGATGAATATTCAAAATTTTGCCCGCAAAACGTTGCGTAAATTCAGCAGTTAAAATTTTCATATAACCAGCTAGCACAATTAAATCCGCACCAAGCTCAGCAATATAATCACCGATAGCCCGATCCATCGCTAGATTATCGGCGTAATCTTTGCGTTCAAAAAGTGCGGTGGGAATTTCAGCCATTTTTGCGCGTTGCAATCCATAAGCTGTTGCTTTATTGGCGATAACAACACAAATTTGCGCAGGAATATCCCCCACCTTGCAAGCATCAATAATGCTTTGCAAGGTTTGCCCTTCACCAGAAATCAGTACAACGATCTTTTTCATTAACGAATAACAACCTGCTCTTCGCCTTCGCTCGCACTTTCAATGCGACCAATCTGCCACGCTTTTTCTCCTGCTTGTTGCAATAACGCCAACGCGGTTTCCACTTGATCTTGTGGCAAGGCGATGATCATACCCACCCCGCAGTTGAAGGTGCGATACATTTCATAGCGATCGATATTGCCCTGCTCTTGTAGCCAGTTAAAAATAGCAGGCCACTGCCAGCTTGATTCATCGATCACCGCTTTCACATTATGCGGTAACACGCGTGGGATATTTTCCCAGAAACCACCACCCGTTAAGTGAGAAATGGCGTGAACAGGCACTTGTTTGATTAATTGTAAAATGGATTTAACATAAATTTTGGTTGGTGCTAACACTTGATCGGCGAAAGGCTTGCCGTCTAATTCTGCGCTAGCAGGATCGATACCTGAACGCTCGATCACTTTGCGAATTAAGGAATAACCATTGGAATGCGCGCCACTTGAGCCTAATGCGATCAAGGCATCGCCCACTTTCACTTGGCTGCCGTCAATAATTTCTGACTTCTCGACCACGCCCACGCAGAAACCTGCTAAATCATAATCACCTTGATGATACATTCCCGGCATTTCTGCGGTTTCCCCGCCCACTAAGGCGCAACCTGATTGTTCACAACCGTTGGCAATGCCTTTAATCACGCTGGCTGCCACATCTACGTCTAATTTGCCTGTGGCATAATAATCTAGGAAAAATAGCGGTTCTGCCCCTTGCACCACTAAATCATTAACACACATCGCCACCAAGTCAATGCCGATGGTATCGTGTTTATTCAAATCAATGGCAAGGCGTAATTTTGTGCCAACACCGTCTGTGCCAGATACCAAAATTGGCTCTTTATACTTACTTGGCAACGCACAAAGTGCGCCAAATCCGCCCAACCCGCCAATCACTTCGGGACGTGTGGTGCGTTTTACATCGGCTTTAATTTTTTCTACTAAGGCATTACCGGCATTAATATCCACACCCGCATCTTTGTAGCTTAATGATTGTTTGCTCACGATTTTTTCCTATATGGCTTAGTTACTGAAAATTGCGCGTATTGTAGCACGCCTACGCAATCGTTTGCGATAAATTTTATCGCGTCGCTTTATTTTCACTCTTTATGTAAACCTGATTTTGTGGAACAGCTCACAAAATCGTCTTTTTTTGTTAGAAATCCCCATTCAAATATGCCAGAATGATTCTAACCTAATCAACGAGCGTTCTTCCTCAGAATGTAAGGAGGTCAAAATGAAAAAATTAGGTTTATTGCTTAGCGTAATGCTACTTGCCGCTTGTTCTACTACGCCTACTTCACCCCCCCCCAGAAGTGAAACTCGTTCTGCCAACCTTAACCAAAGCAGGCTATTTCAAATTAGCGCCGAATGCAGAATATTATGTGGATACCCAATCGGTTTGGGTGGATAACGAAGACAAGCACTTAATTCATTTTGATGTGGTGATTAATTCGGATAAAGGCTTATTCGTGTATAAAGAGCGCCCAGAACTTTACGCGCGCTCCGTGCGTCAATACAAAATTCTCAACTGTAATACTTATCGTCTTACCCAAGTTAGAACGGATTACTACAGTGAATTTTGGGGCGATGGTATCCGCGCCGCCTTACGCAAACAACAACGACACACGGTAAAATTGCAAAAAAATTCCACCCTTTATGTGTTAGGGCAAGTGATGTGCGCCAATATGTATCGAAAATGGTAAGGCAATAAAAGTAAAATAAAAAAATTAGGGCTGGGAAAAGTCAAAAGAAGAAAAACAAAGTGCGGTGCAAATTTTCAGAATTTTTGCACCGCACTTCTTTATTTTAGCATTATGGGCGTTTAATCAAACGCTTACGCATTTTGATGTTGATCATTTCGACTACCACGGAGAAGCCCATAGCAAAGTAAATGTAGCCTTTTGGAATGTGGAAATCTAAGCCTTCACCAATTAACGCCACCCCCACTAAAATCAAGAACGAAAGAGCAAGCACTTTCAGTGTTGGGTGCGATTCCACAAAATCACCAATCGGTTTAGCTGCTAGCATCATTACGCCAACGGCAATCACGATTGCCAAAATCATCACGCCAATTTCGCTTGCCATTCCCACAGCAGTGATCACAGAATCCAGCGAGAATACAATATCTAAAATGGCAATTTGAATAAGTACGCTGAAAAAATTCACTTTTTTTGCCGCACTTTGGTCTTCGCCCTCTTCTTCTGGCGTCATTGCGTGGTGAATTTCATGGGTACTTTTTGCCACCAAAAATAATCCCCCCACGATTAAAATAAGATCACGCCCTGAAATTTGTTGCGAGAAAACTTCAAATAACGGCTCAGTGAGTTTCATTAACCAAGAAAGAGAAAGCAATAATAAAATACGCGTAGCCATTGCCAAACCTAAGCCTATTAAACGTCCTGATTGGCGTTGTTGGGCAGGCAAACGCCCTACTAAAATACTGATAAAAATGATGTTATCAATACCTAAAACAATTTCTAATGCGGTTAGGGTAAATAAAGCCACCCACGCTTCGGGGCTGGCGATCCAGTCAAACATAATAAGTTCCTTATAGATTAAATCTAAAGCGAACAATGATATAGATTTCTGGCTTTAATGGAAAGGAAAATCAGCCATTTTGCTGAAACTGTTGCAGGATTTCGTGGGTGAAATTTTTGCGTAAATAAAAGCCGAGCGGTAAGGTGTCAATCATCTCGCCATTTCGCCCAATGCCTTTGGTGAGCGCTTTACTATTTGCACCTTTGGGGCGAAGTTGCAGCACTTCACCAAGGCGCGCGGTGATTTCATCAAGCCGACCAAACACGATATATTCCATTAATTCTTCCCAATCTTGCTGCAAACGTTGTTCTTGCTCAGGTGAGGGCTGCCATAAAATAGGCTGCCCAATATGACGTTCAGCAAGGGGAATGGTGCGTTCGCCTTCAATGGGAATCCACAACACTTTGGATAATTTATGGCGAACGTGAGAAGACTGCCAAGTGATTCCACTATTTTGAATTAGCGGCGCAAGGCTGACGAAGGTGGTTTCAAGGGGCTTACCTTGACGATTAATGGGTATCGTTTTAAGTTCAATGCCAAGATGGGCAAAATCTTGTTCCGCTTTGCTGCCCGCGGTTGCGCCTAAGGCAGTTTCCAGCAGCATTCCCACCCAGCCTTTATCCCGTTTCAAATTGGGTGGCACAGACATATTCAGCTCCTTGGCAACTTCACCAAAGGTGAGTCCTGCCAGCGATTGCGCAAGGGTGAGTAGAGCTTGTTCGGTGTTTGGGCTATTCATAAAGTGCGGTGCTTTTTTATTAAATTTTTGTTAGCTTTGATACTTTTTCAATAATTTCTGTTTGACGTATTCCACGCCTTTATCTACATAAGCAATATTTTCTAACTGTAATAAATGGCGTTTGGCAGGCAACCCGCCGCCAAATCCCGTTAGCTGACGTGTTTTTCCTAACACACGATGGCAAGGAATAATAATGCTAATTGGATTACTTCCCACCGCACCACCTACAGCGCGCACCGCTTTAGGCTTGTTAATGCGATTGGCTAACTCACCATAACTTATGGTTTCACCATAAGCAATTTTGCAAAGCTGCTGCCAAATGCTTTGCTGAAAAGGCGTGCCTTGTGGATTAAGCGGAATCCCTGCAAAATCTTCTTTTTCACCATTAAAATAACGGGTTAATGCTGCCGAAACTTGTGCAAAGAGCGGGTGATTTTCCTGTAAAATCCATTTCGGATTTGGCGCAATTTGTTCAGCTTCTAAATCCAAATTGGTTAATTTGTTATCTTGGCTAATCATCAATAACCGCCCAATGGGGGAATGATAATAACAATAATAGATTTCGGACATTGGGAATTCTCTAAAAAATCACATAAAAAAGACCGCACTTACCTTTTTATACAGAAAAGCTCGCGCGATAGTTAGCTATTTTCACCTTGTCTAAACTTTGTTGAAAACGTGCATTATGGTTCAGTTCCCACAAATCAAGGTTATTTTGTAAATTAATCCAAAATTCGGGGCTAGTACCAAATGCTTTTGCCAATTTTACCGCCATTTCTAAAGTTACTTTAGAATGACTGTTTACTAAGCTACTTGCAGTATTGCGATGAACATCAAGGATTTCAGCAAGATCGCTTACTTTAAGATTAAGTGGTTGCAAAAATTCTTCTTGTAAGATTTCTCCGACTGATGTGGGCTTGCGCTGTGTTGAGAACATCATTTCTCCTTATAAATCATAACGATGTGGATCAAGATAAAGCTGAGAAAGTTCGCCATTATCGAAATGAAAAATCAGACGATATTGTTTATTCACCCTAATGGAATAACGTTTATTCTCTTTAGGCTCGAGCAGCTCAAGGTGATTGGCAGGCGGAACCCGTAAATCATTTAGATTTTCTGCCGCATTTATCATATCTAATTTTCTTGCTAATACTTTCGTTAAATTTGCAGGAATTTTGCTATGCAATTCCCCATACTGGAAAAAACGATAAAGATAGTCATCTTTAAAATGCTTAGCCGTTAAATTAAACAT
Protein sequences of DBSCAN-SWA_2 >LR134167|2035600:2040803|2037587_2037977_+|VEB25105.1|DBSCAN-SWA MKLVLPTLTKAGYFKLAPNAEYYVDTQSVWVDNEDKHLIHFDVVINSDKGLFVYKERPELYARSVRQYKILNCNTYRLTQVRTDYYSEFWGDGIRAALRKQQRHTVKLQKNSTLYVLGQVMCANMYRKW >LR134167|2035600:2040803|2038086_2038812_-|VEB25106.1|DBSCAN-SWA MFDWIASPEAWVALFTLTALEIVLGIDNIIFISILVGRLPAQQRQSGRLIGLGLAMATRILLLLSLSWLMKLTEPLFEVFSQQISGRDLILIVGGLFLVAKSTHEIHHAMTPEEEGEDQSAAKKVNFFSVLIQIAILDIVFSLDSVITAVGMASEIGVMILAIVIAVGVMMLAAKPIGDFVESHPTLKVLALSFLILVGVALIGEGLDFHIPKGYIYFAMGFSVVVEMINIKMRKRLIKRP >LR134167|2035600:2040803|2040497_2040803_-|VEB25110.1|DBSCAN-SWA MFNLTAKHFKDDYLYRFFQYGELHSKIPANLTKVLARKLDMINAAENLNDLRVPPANHLELLEPKENKRYSIRVNKQYRLIFHFDNGELSQLYLDPHRYDL >LR134167|2035600:2040803|2038882_2039551_-|VEB25107.1|DBSCAN-SWA MNSPNTEQALLTLAQSLAGLTFGEVAKELNMSVPPNLKRDKGWVGMLLETALGATAGSKAEQDFAHLGIELKTIPINRQGKPLETTFVSLAPLIQNSGITWQSSHVRHKLSKVLWIPIEGERTIPLAERHIGQPILWQPSPEQEQRLQQDWEELMEYIVFGRLDEITARLGEVLQLRPKGANSKALTKGIGRNGEMIDTLPLGFYLRKNFTHEILQQFQQNG >LR134167|2035600:2040803|2035600_2036239_-|VEB25103.1|DBSCAN-SWA MKKIVVLISGEGQTLQSIIDACKVGDIPAQICVVIANKATAYGLQRAKMAEIPTALFERKDYADNLAMDRAIGDYIAELGADLIVLAGYMKILTAEFTQRFAGKILNIHPSLLPKYPGLDTYQRALAAGEQEHGTTVHFVNEEVDGGAIVLQAKVPIFPDDEVSDIEQRVKYQEQQIYPLVIKWFVTDRLTLQNGSAYLDGKCLPNAGYAMD >LR134167|2035600:2040803|2040167_2040488_-|VEB25109.1|DBSCAN-SWA MFSTQRKPTSVGEILQEEFLQPLNLKVSDLAEILDVHRNTASSLVNSHSKVTLEMAVKLAKAFGTSPEFWINLQNNLDLWELNHNARFQQSLDKVKIANYRASFSV >LR134167|2035600:2040803|2039581_2040121_-|VEB25108.1|DBSCAN-SWA MSEIYYCYYHSPIGRLLMISQDNKLTNLDLEAEQIAPNPKWILQENHPLFAQVSAALTRYFNGEKEDFAGIPLNPQGTPFQQSIWQQLCKIAYGETISYGELANRINKPKAVRAVGGAVGSNPISIIIPCHRVLGKTRQLTGFGGGLPAKRHLLQLENIAYVDKGVEYVKQKLLKKYQS >LR134167|2035600:2040803|2036238_2037276_-|VEB25104.1|DBSCAN-SWA MSKQSLSYKDAGVDINAGNALVEKIKADVKRTTRPEVIGGLGGFGALCALPSKYKEPILVSGTDGVGTKLRLAIDLNKHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDVAASVIKGIANGCEQSGCALVGGETAEMPGMYHQGDYDLAGFCVGVVEKSEIIDGSQVKVGDALIALGSSGAHSNGYSLIRKVIERSGIDPASAELDGKPFADQVLAPTKIYVKSILQLIKQVPVHAISHLTGGGFWENIPRVLPHNVKAVIDESSWQWPAIFNWLQEQGNIDRYEMYRTFNCGVGMIIALPQDQVETALALLQQAGEKAWQIGRIESASEGEEQVVIR |
8 | Prochlorococcus_phage(33.33%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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