CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134169	Actinobacillus lignieresii strain NCTC10568 genome assembly, chromosome: 1	1 crisprs	DinG,DEDDh,csa3,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,PD-DExK,cas3	7	16	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134169_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134169_1

1317304-1318954

TypeI-F

I-F

Consensus_repeat	Method
CTTCACTGCCGTATAGGCAGCTTAGAAA	CRISPRCasFinder
NCTTCACTGCCGTATAGGCAGCTTAGAAA	CRT

27 spacers

cas6f,cas7f,cas5f,cas8f,cas1,cas3-cas2

The CRISPR arrays of LR134169_1

>merge|LR134169|1|1317304-1318954|CRISPRCasFinder,CRT
CTTCACTGCCGTATAGGCAGCTTAGAAAAACATTAAAGAACATTTACAAAATAGGTAATCCTTCACTGCCGTATAGGCAGCTTAGAAAAAATGAACCAAAATTAAAACTTGTTGCTTAATCTTCACTGCCGTATAGGCAGCTTAGAAAATCATCATTGCACTAGTTGAGCCCAACACTCCCTTCACTGCCGTATAGGCAGCTTAGAAATTTGACCGCTGTAACAAGCGGTCTTTTTTTACCTTCACTGCCGTATAGGCAGCTTAGAAAATACAATTTCTTGATGATAAAGGCGATTACGACTTCACTGCCGTATAGGCAGCTTAGAAATTATTGCCAAGTGAAGTAATGACGAAATGGGTCTTCACTGCCGTATAGGCAGCTTAGAAAAATAAGGTTGCCGCATACAAAGTAATTAATTTCTTCACTGCCGTATAGGCAGCTTAGAAAAAGAAGATTGCTTAGTTCGATTAAAACATCATCTTCACTGCCGTATAGGCAGCTTAGAAACTCCATTTGTTCGAATATAATGGTTTGGTAAACTTCACTGCCGTATAGGCAGCTTAGAAAAAAATCGATTTCTATACACTATTCGATAACTGCTTCACTGCCGTATAGGCAGCTTAGAAAAACTCCGGCATATACTAATAGTGACATAGACGCTTCACTGCCGTATAGGCAGCTTAGAAATTACTGAATTTATCAGAATAATAGGCTTTTAACTTCACTGCCGTATAGGCAGCTTAGAAAAGGCACAGAATCTTTTTGTAGCAACCACTTTTCTTCACTGCCGTATAGGCAGCTTAGAAACCAAGCGAACATTGAAGCTATACTCCCCTCTACTTCACTGCCGTATAGGCAGCTTAGAAAGTTATGTCCGGAGGAAACCACATTAATAAAATCTTCACTGCCGTATAGGCAGTTTAGAAATTGCCGAGGTGCTTTTTCTTTTTCCTTTCACTTCTTCACTGCCGTATAGGCAGCTTAGAAAAACCACGCCCAAGCTATACATCGTTCAAAATCACTTCACTGCCGTATAGGCAGCTTAGAAATTTCTTTCCTCTATCATATCCAACCACGCCCACTTCACTGCCGTATAGGCAGCTTAGAAAGCCGGAACCTAAAAGAATCGATAAAGACACACCTTCACTGCCGTATAGGCAGCTTAGAAATATCCTGCTTTAGAAAATTTGAAGAACTAGCCCTTCACTGCCGTATAGGCAGCTTAGAAATGATGAAATCATTAACAGCCCGATTGCCCGTGCTTCACTGCCGTATAGGCAGCTTAGAAAAAGTTTCGCTAGGTGCTGGCGGCGCGAACATCCTTCACTGCCGTATAGGCAGCTTAGAAATCCTCAAAAGGTCAATAAAAAATCTTTGTTAACTTCACTGCCGTATAGGCAGCTTAGAAAACCGAAACGTTTACCCCATTTTTCATCAACCCCTTCACTGCCGTATAGGCAGCTTAGAAAAGCGAATAAAAAAATATCGAAGTTAGATGGATCTTCACTGCCGTATAGGCAGCTTAGAAAAACAATTCGCACAATGCCATCTTCGATAGAATCTTCACTGCCCGTATAGGCAGCTTAGAAAGCCGGAACCTAAAAGAATTGATAAAGACACACCTTCACTGCCGTATAGGCAGCCACAAAT

>LR134169|1|1|1317304-1318954|CRISPRCasFinder
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACATTAAAGAACATTTACAAAATAGGTAATC
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAATGAACCAAAATTAAAACTTGTTGCTTAAT
CTTCACTGCCGTATAGGCAGCTTAGAAA	ATCATCATTGCACTAGTTGAGCCCAACACTCC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTTGACCGCTGTAACAAGCGGTCTTTTTTTAC
CTTCACTGCCGTATAGGCAGCTTAGAAA	ATACAATTTCTTGATGATAAAGGCGATTACGA
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTATTGCCAAGTGAAGTAATGACGAAATGGGT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AATAAGGTTGCCGCATACAAAGTAATTAATTT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAGAAGATTGCTTAGTTCGATTAAAACATCAT
CTTCACTGCCGTATAGGCAGCTTAGAAA	CTCCATTTGTTCGAATATAATGGTTTGGTAAA
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAAATCGATTTCTATACACTATTCGATAACTG
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACTCCGGCATATACTAATAGTGACATAGACG
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTACTGAATTTATCAGAATAATAGGCTTTTAA
CTTCACTGCCGTATAGGCAGCTTAGAAA	AGGCACAGAATCTTTTTGTAGCAACCACTTTT
CTTCACTGCCGTATAGGCAGCTTAGAAA	CCAAGCGAACATTGAAGCTATACTCCCCTCTA
CTTCACTGCCGTATAGGCAGCTTAGAAA	GTTATGTCCGGAGGAAACCACATTAATAAAAT
CTTCACTGCCGTATAGGCAGTTTAGAAA	TTGCCGAGGTGCTTTTTCTTTTTCCTTTCACTT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACCACGCCCAAGCTATACATCGTTCAAAATCA
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTTCTTTCCTCTATCATATCCAACCACGCCCA
CTTCACTGCCGTATAGGCAGCTTAGAAA	GCCGGAACCTAAAAGAATCGATAAAGACACAC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TATCCTGCTTTAGAAAATTTGAAGAACTAGCC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TGATGAAATCATTAACAGCCCGATTGCCCGTG
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAGTTTCGCTAGGTGCTGGCGGCGCGAACATC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TCCTCAAAAGGTCAATAAAAAATCTTTGTTAA
CTTCACTGCCGTATAGGCAGCTTAGAAA	ACCGAAACGTTTACCCCATTTTTCATCAACCC
CTTCACTGCCGTATAGGCAGCTTAGAAA	AGCGAATAAAAAAATATCGAAGTTAGATGGAT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACAATTCGCACAATGCCATCTTCGATAGAATC
TTCACTGCCCGTATAGGCAGCTTAGAAA	GCCGGAACCTAAAAGAATTGATAAAGACACAC
CTTCACTGCCGTATAGGCAGCCACAAAT

>LR134169|1|1|1317304-1318954|CRT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACATTAAAGAACATTTACAAAATAGGTAATC
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAATGAACCAAAATTAAAACTTGTTGCTTAAT
CTTCACTGCCGTATAGGCAGCTTAGAAA	ATCATCATTGCACTAGTTGAGCCCAACACTCC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTTGACCGCTGTAACAAGCGGTCTTTTTTTAC
CTTCACTGCCGTATAGGCAGCTTAGAAA	ATACAATTTCTTGATGATAAAGGCGATTACGA
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTATTGCCAAGTGAAGTAATGACGAAATGGGT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AATAAGGTTGCCGCATACAAAGTAATTAATTT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAGAAGATTGCTTAGTTCGATTAAAACATCAT
CTTCACTGCCGTATAGGCAGCTTAGAAA	CTCCATTTGTTCGAATATAATGGTTTGGTAAA
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAAATCGATTTCTATACACTATTCGATAACTG
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACTCCGGCATATACTAATAGTGACATAGACG
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTACTGAATTTATCAGAATAATAGGCTTTTAA
CTTCACTGCCGTATAGGCAGCTTAGAAA	AGGCACAGAATCTTTTTGTAGCAACCACTTTT
CTTCACTGCCGTATAGGCAGCTTAGAAA	CCAAGCGAACATTGAAGCTATACTCCCCTCTA
CTTCACTGCCGTATAGGCAGCTTAGAAA	GTTATGTCCGGAGGAAACCACATTAATAAAAT
CTTCACTGCCGTATAGGCAGTTTAGAAA	TTGCCGAGGTGCTTTTTCTTTTTCCTTTCACTT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACCACGCCCAAGCTATACATCGTTCAAAATCA
CTTCACTGCCGTATAGGCAGCTTAGAAA	TTTCTTTCCTCTATCATATCCAACCACGCCCA
CTTCACTGCCGTATAGGCAGCTTAGAAA	GCCGGAACCTAAAAGAATCGATAAAGACACAC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TATCCTGCTTTAGAAAATTTGAAGAACTAGCC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TGATGAAATCATTAACAGCCCGATTGCCCGTG
CTTCACTGCCGTATAGGCAGCTTAGAAA	AAGTTTCGCTAGGTGCTGGCGGCGCGAACATC
CTTCACTGCCGTATAGGCAGCTTAGAAA	TCCTCAAAAGGTCAATAAAAAATCTTTGTTAA
CTTCACTGCCGTATAGGCAGCTTAGAAA	ACCGAAACGTTTACCCCATTTTTCATCAACCC
CTTCACTGCCGTATAGGCAGCTTAGAAA	AGCGAATAAAAAAATATCGAAGTTAGATGGAT
CTTCACTGCCGTATAGGCAGCTTAGAAA	AACAATTCGCACAATGCCATCTTCGATAGAAT
CTTCACTGCCCGTATAGGCAGCTTAGAA	AGCCGGAACCTAAAAGAATTGATAAAGACACAC
CTTCACTGCCGTATAGGCAGCCACAAAT

Protein	Signature genes	Signature genes Name	Protein_function
LR134169.1\|VEB26587.1\|1314632_1315592_+\|CRISPR-associated-protein	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
LR134169.1\|VEB26597.1\|1327398_1327995_+\|Uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|225653
LR134169.1\|VEB26595.1\|1325574_1326840_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
LR134169.1\|VEB26586.1\|1313288_1314623_+\|CRISPR-associated-protein	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|378220
LR134169.1\|VEB26581.1\|1308759_1309296_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|222856
LR134169.1\|VEB26590.1\|1318990_1319635_+\|CRISPR-associated-protein	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
LR134169.1\|VEB26591.1\|1319708_1320341_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|371130
LR134169.1\|VEB26582.1\|1309344_1309698_-\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
LR134169.1\|VEB26596.1\|1326995_1327343_+\|Uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|225653
LR134169.1\|VEB26585.1\|1310951_1312883_-\|threonyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234752
LR134169.1\|VEB26599.1\|1328500_1329166_+\|transcriptional-regulatory-protein	unknown	unknown	gnl\|CDD\|182387
LR134169.1\|VEB26594.1\|1324456_1325344_+\|inorganic-polyphosphate/ATP-NAD-kinase	unknown	unknown	gnl\|CDD\|167337
LR134169.1\|VEB26589.1\|1316591_1317161_+\|CRISPR-associated-protein-Cas6/Csy4,-subtype-I-F/YPEST	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|187870
LR134169.1\|VEB26588.1\|1315593_1316589_+\|CRISPR-associated-protein	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
LR134169.1\|VEB26598.1\|1328046_1328412_+\|Uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|225653
LR134169.1\|VEB26584.1\|1310208_1310688_-\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
LR134169.1\|VEB26580.1\|1308428_1308728_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134169.1\|VEB26592.1\|1320725_1321022_+\|CRISPR-associated-protein	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
LR134169.1\|VEB26583.1\|1309765_1309963_-\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
LR134169.1\|VEB26593.1\|1321018_1324366_+\|helicase	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201

Protein	Function_ID	Function_description	E-value
LR134169.1\|VEB26587.1\|1314632_1315592_+\|CRISPR-associated-protein	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	6.44094e-137
LR134169.1\|VEB26597.1\|1327398_1327995_+\|Uncharacterized-conserved-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	4.76228e-26
LR134169.1\|VEB26586.1\|1313288_1314623_+\|CRISPR-associated-protein	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	4.71421e-153
LR134169.1\|VEB26581.1\|1308759_1309296_-\|Uncharacterised-protein	gnl\|CDD\|222856	PHA02530, pseT, polynucleotide kinase; Provisional.	9.10573e-07
LR134169.1\|VEB26590.1\|1318990_1319635_+\|CRISPR-associated-protein	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.11504e-111
LR134169.1\|VEB26591.1\|1319708_1320341_-\|Uncharacterised-protein	gnl\|CDD\|371130	pfam10551, MULE, MULE transposase domain. This domain was identified by Babu and colleagues.	8.23431e-06
LR134169.1\|VEB26582.1\|1309344_1309698_-\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	1.51493e-66
LR134169.1\|VEB26596.1\|1326995_1327343_+\|Uncharacterized-conserved-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	6.0447e-34
LR134169.1\|VEB26585.1\|1310951_1312883_-\|threonyl-tRNA-synthetase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
LR134169.1\|VEB26599.1\|1328500_1329166_+\|transcriptional-regulatory-protein	gnl\|CDD\|182387	PRK10336, PRK10336, two-component system response regulator QseB.	4.50622e-97
LR134169.1\|VEB26594.1\|1324456_1325344_+\|inorganic-polyphosphate/ATP-NAD-kinase	gnl\|CDD\|167337	PRK02231, ppnK, NAD(+) kinase.	0
LR134169.1\|VEB26589.1\|1316591_1317161_+\|CRISPR-associated-protein-Cas6/Csy4,-subtype-I-F/YPEST	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	7.6733e-62
LR134169.1\|VEB26588.1\|1315593_1316589_+\|CRISPR-associated-protein	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
LR134169.1\|VEB26598.1\|1328046_1328412_+\|Uncharacterized-conserved-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	8.88903e-30
LR134169.1\|VEB26584.1\|1310208_1310688_-\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	3.73291e-90
LR134169.1\|VEB26595.1\|1325574_1326840_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
LR134169.1\|VEB26592.1\|1320725_1321022_+\|CRISPR-associated-protein	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.66835e-57
LR134169.1\|VEB26583.1\|1309765_1309963_-\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	3.48394e-21
LR134169.1\|VEB26593.1\|1321018_1324366_+\|helicase	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0

>LR134169.1|VEB26589.1|1316591_1317161_+|CRISPR-associated-protein-Cas6/Csy4,-subtype-I-F/YPEST
MSELTHYIELKAIPQVDILQTNVIAHGLQILHKFLPLYQGEIGLSFPAYGLGRTLGGIIRVFGNEQHCTQIKTQLIGEGLQDYVLITSVTPVPEEIVEYHRYQRVHRKGQSAIRRTEQFLVQQGKWTEEIRQEMLIHQQNQKVFPHVKLKSGSTKQHFVLAIRQLRLADSVSGLFNAYGLSKIATVPHF
>LR134169.1|VEB26588.1|1315593_1316589_+|CRISPR-associated-protein
MTKLTTASVLAFERKLDISDATFTQKNSMSDAPEIAVTIREKSVRGTISNRLKNALANDPAKLDAEIEKANLQCVDVATLNDDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQNYLTAHGMSELAKRYATNLANARWLWRNRISAETIQVSIKVADDVIVFENAKQLPLNSFEQADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEINNKAGMHSQKIGNAIRTIDTWYAENAPFPIAAEPYGAVTNLGTAFRQPKEKIDFYTLFDNWVLKDVAPELEQQHYVISVLIRGGVFGASGKE
>LR134169.1|VEB26587.1|1314632_1315592_+|CRISPR-associated-protein
MNYPNFYLLFDHIEIQAANTISSPITYGFPALTGFTGTIHALSRKLFSQQVELGGVMIACHDYQILGYKNSDFSDLTFNQTRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPELYYALNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFNLSEESEIKLALMPAFVLMDAKQILADITQSLQNGISNNEITIYPATPNANVLDALLEVATLHHIPLSENATSQEWETFNVNQGKGWLVPIPVGYQAISPLFTAGEMQNCRVTEYPSQYVETVYSLGKWVFPFSLPDDLSQCFWHYNTPQDNLYLITQGA
>LR134169.1|VEB26586.1|1313288_1314623_+|CRISPR-associated-protein
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDAWLHIAATEMAKQLKFGTHIAKGIHPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAALPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDHSLSAQYKIAFQMALKGNLNSPETHERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKNKAQNPYISIPHLAATKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFTKGELRLTGTQNTIFNDRLTYVCRAGLYQLYQAVEAPKNIYTIRDSRAEAINLIVQIVLQQAYKLQKRTAGWSRDYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQRFAAWLNALLKKRFPKYQDDFTATEYNEWRKYFRKKLHRQLRHI
>LR134169.1|VEB26585.1|1310951_1312883_-|threonyl-tRNA-synthetase
MPIITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERCDACDIISEDSSLEIITAKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKRMLELAKTNYDVVKKPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTRKGADLGTFTIEEFVEILKNQVKARELKLLGEE
>LR134169.1|VEB26584.1|1310208_1310688_-|translation-initiation-factor-IF-3
MKEVRLTDGNGEQVGIVSIQDALARAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQIKEIKFRPGTDDGDYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLERVKTDTAEVAVVESAPGKLEGRQAVMVIAPKKK
>LR134169.1|VEB26583.1|1309765_1309963_-|50S-ribosomal-protein-L35
MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVVACLPYA
>LR134169.1|VEB26582.1|1309344_1309698_-|50S-ribosomal-protein-L20
MARVKRGVIARARHKKVLKAAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKASVEIDRKILADIAVFDKVAFAALVEKAKSAL
>LR134169.1|VEB26581.1|1308759_1309296_-|Uncharacterised-protein
MRKLIIIRGHSGSGKSTFAKQKIAEFEQHFPSGKVFHIEHDQFLYENGEYIWTKERFQSAKMLAEQKLALAWEFAKSHPQLPVFIVISNVNLSLQAVEKYQNIANSLQMKIEKYRLMNFFKNQHHVDIYTVLSMYLALEQQPLVDEVIVRPIKKMPYFMRIILEKMRKRRDKKDIQAV
>LR134169.1|VEB26580.1|1308428_1308728_-|Uncharacterised-protein
MKKVMLLALPFVVAACSAPEQQSTVPMDMQAVAEYQQRVASGNTVSEKQKQRVAQQIEPDEPLNQSDKRPKVVRQVVREPVIYPSIGIGYGYHRHRHHW
>LR134169.1|VEB26590.1|1318990_1319635_+|CRISPR-associated-protein
MKKTPYIPSSDLKTILHSKRANIYYLEHCRILLNGGRVEYVTDKGNESLYWNIPIANTICLLLGSGTSITQAAMRELSKAGVMVGFCSGGGTPLFNGTEAEIGCDFFSPQSEYRPVEYLQQWCRFWFDDNKRLNSAKTLQLARLQLLLRTWNKFDWEYDQDKLTALVQHYQEEFTNVKDSQSLLAAEGRLTAKLYALANQATLNDESFKRENGG
>LR134169.1|VEB26591.1|1319708_1320341_-|Uncharacterised-protein
MDTTHFKQRFAVLVLVDSLSSKPVYFRFIPAEKNQYYFEAISELMEKGIKIQSITCDGRRGLLNAYPDIPTQMCHFHQVGRGIFYLTKSPKSPAGKALLELYYSLKSYTKETLNQALLQWLNEYKTYFNERSEHNAKRFKHKRLRSAYWSLKRSINYLFTYQDYPELHIAHTTNLVESFFKLMKAKLAPHQGLTDEHKMVFIKDFICQRS
>LR134169.1|VEB26592.1|1320725_1321022_+|CRISPR-associated-protein
MDHGNYLAYGLGATACWVLGLPHGLAILHGKTRRGGLVFDAADIIKDAIILPQAFISAQNGDNEKQFRQACINNLIRFEALDIIINTLKQLASEGANI
>LR134169.1|VEB26593.1|1321018_1324366_+|helicase
MNILLISQCNKNALTETRRILDQFAERCGDRCWQTAITQAGLEALHNMLRQTARKNTAVACYWTHGKNLTELLWIVGDKSQFNAEGRVPTNRTQRNILRADDENGWLSAYSIQILTAIAALLHDIGKANIAFQQKLKPKAKFFPDCYRHEWISARLFEAMIVGCDTDEQWLARLANWQNYIEENPDWLPNLTLIADKSDYPHNFSHFPPIAKVVLWLILSHHKLPFTQKTLDCHSDQERILSEHFMLKTAVEPFYRFLAPVEHWVMNQSEHPQPENFWQFKTLVMESKTWQKTMQRWANKALNHAPLRELSQLNKTINDPFLLILSRLCLIVGDHNYSSAPADRQLGDLNFFEKLLANTDKKTKQPKQALDEHLLGVCKTSARFARLLPKLAKELPHIQQHRPFTKRTNLDRFKWQNRAFELVRSVQSESEQAGFFGVNMASTGCGKTLANAKIMYGLSNQDGARFTIALGLRVLTLQTGLALRQKLMLSSEQLAVLVGGSATKQLFELQNESVQSGSESVQEWFESNEVYGMNFLESGIADEEFGTLLADNKAKKLLYAPIVSCTLDHMIQATETIRGGKHIVPLLRLLTSDLVLDEPDDFSQSDLPALSRLVHLAGMFGSKVLLSSATLTPDLISGLFNAYQAGRKIYNRHQGINPELPICCAWIDEYKQQQQKCAAVKEFERYHAQFTASRAEKLMQSPIRHKAEIIQLPPFSAVENQDINYTMLADSLIEQAITLHQRYAQQDPISKKFVSVGLIRFANIKPMIPLVETLFKTPLNTQFSDYKIHLCCYHSRQLLLLRSKLEEKLDRILNRHEPEALFSQPEIMRALTQDKAVHHIFIVLGSPVTEVGRDHDYDWAIVDPSSMRSIIQLAGRVWRHRPEKIATQANILLLPTNWRGLQTKNNGSEPIFCRPGFEDQSNKLTSHKTVDLIKQEHLASITAIPRIIKPLVIQAETNLADLEHKVIGDLLNNKGINRVNAYWQDNLTNRLNANLPLITPFRKNERKWQTEVVCLPSEESHWEFMFKSSEKAWEDPYFENDYLAEISYQKLNCESPWITPWLTTPLNQALSELCEQLDEADQTQAALRFATVSLQHYGKTLPIWKFNETLGFWQP
>LR134169.1|VEB26594.1|1324456_1325344_+|inorganic-polyphosphate/ATP-NAD-kinase
MKPEERFFECIAIVGKPRHEIALETHLAVYNWLKDRHYRVLVEKSIAQQLNLPEARSLEEIGQQANLVIVIGGDGNMLGMARRLAEYQVPLIGINRGNLGFLTDIAPHSTFEQLHNCIERGEFVIEERFLLEARIERNGKIIATNNALNEVVIHPTQVARIIEFEVYIDGKFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPNMNAIALVPMHPHTLSSRPLVIDGDSQISLRFAQYNQPSLEVSCDGQYDLPFTPEDRIIVEKSPNKLRLLHLKDYNYFTVLGSKLGWSSKLF
>LR134169.1|VEB26595.1|1325574_1326840_+|serine-hydroxymethyltransferase
MFTANMNIQDYDPILWQAIENENRRQEEHIELIASENYASPRVMQAQGSQFTNKYAEGYPGKRYYGGCEYADIVEQLAIDRAKQLFGADYVNVQPHSGSQANAAVYGALIQPNNTILGMDLAHGGHLTHGAKVSFSGKIYNSVLYGITAEGLIDYEDVRQKALECKPKMIVAGFSAYSQIVDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPSPLPYAHVVTTTTHKTLGGPRGGLILSACGDEEIYKKLQSSVFPANQGGPLVHIIAAKAVCFKEALEPEYKIYQQNVVKNAKAMVEVFKQRGYEVISNGTENHLFLVSFVKQGLTGKAADAALGQANITVNKNSVPNDPQKPFITSGIRVGTPAVTRRGFKEADVQALAGWMCDVLDSIGKDNHEQVIAETKAKVLDICARLPVYAK
>LR134169.1|VEB26596.1|1326995_1327343_+|Uncharacterized-conserved-protein
MKKFLTLTTLLAISTSALAGFNGGNNEPAKAVNTIAQAKKAIENTPVTLTGNITRQIDNDEFFFKDATGEIKIDVEDHAWQNQNITPKDKITIYGKVDQDSQGPASIDVDRIQKR
>LR134169.1|VEB26597.1|1327398_1327995_+|Uncharacterized-conserved-protein
MKKFMTMTSTLALSSMALTSFANAEETTAQAQNNAQTEMPATAEKAAPVIGQQAVEFTRKAADQMMQGQGRGQNFHSFHHNGKHPHDMMRMMAYHHPHQFGGYKPQGFIDQNAVAKDAKAALEAKDRSFVQLEGSISKQVNDTEYTFVDSTGQIKIEVPPSLWRGLSVGPQDKVRIEGILDKQWEQPEIKVKNITKAK
>LR134169.1|VEB26598.1|1328046_1328412_+|Uncharacterized-conserved-protein
MKKILVLTALATATLLAACSTKNETAQNQTFGANTANTVTIAQAKSLHDDSRVVLQGKIQRQVDGDEYIFADSTGNIKIEIDDHVWKGLDVTPNDTIRIQGKLDKETFDSSIDVYSVEKVQ
>LR134169.1|VEB26599.1|1328500_1329166_+|transcriptional-regulatory-protein
MRILLIEDDKLIGDGLKLGLTKQNFVVDWFQDGKLGFEALFSTEYDAVVLDLTLPKMDGLVILKNWRKENLDIPVLILTARDTLDERILGFNSGADDYLCKPFALMEVVVRLQALIRRRYKQSSTEITLGDLTIDSSTHKVTLTDKEINLTSKEFQLLLLFASNKDRVLTRSAIEEKLYSWDNDVSSNAMEVYIHNLRKKLGKEWIKTVHGIGYKIGNSDA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
LR134169_1	1.4\|1317512\|32\|LR134169\|CRISPRCasFinder,CRT	1317512-1317543	32	LR134169.1	904317-904348	1.0
LR134169_1	1.5\|1317572\|32\|LR134169\|CRISPRCasFinder,CRT	1317572-1317603	32	LR134169.1	902474-902505	1.0
LR134169_1	1.6\|1317632\|32\|LR134169\|CRISPRCasFinder,CRT	1317632-1317663	32	LR134169.1	907505-907536	1.0
LR134169_1	1.8\|1317752\|32\|LR134169\|CRISPRCasFinder,CRT	1317752-1317783	32	LR134169.1	902845-902876	1.0
LR134169_1	1.9\|1317812\|32\|LR134169\|CRISPRCasFinder,CRT	1317812-1317843	32	LR134169.1	901614-901645	1.0
LR134169_1	1.10\|1317872\|32\|LR134169\|CRISPRCasFinder,CRT	1317872-1317903	32	LR134169.1	1316461-1316492	1.0
LR134169_1	1.11\|1317932\|32\|LR134169\|CRISPRCasFinder,CRT	1317932-1317963	32	LR134169.1	889507-889538	1.0

1. spacer 1.4|1317512|32|LR134169|CRISPRCasFinder,CRT matches to position: 904317-904348, mismatch: 0, identity: 1.0

tttgaccgctgtaacaagcggtctttttttac	CRISPR spacer
tttgaccgctgtaacaagcggtctttttttac	Protospacer
********************************

2. spacer 1.5|1317572|32|LR134169|CRISPRCasFinder,CRT matches to position: 902474-902505, mismatch: 0, identity: 1.0

atacaatttcttgatgataaaggcgattacga	CRISPR spacer
atacaatttcttgatgataaaggcgattacga	Protospacer
********************************

3. spacer 1.6|1317632|32|LR134169|CRISPRCasFinder,CRT matches to position: 907505-907536, mismatch: 0, identity: 1.0

ttattgccaagtgaagtaatgacgaaatgggt	CRISPR spacer
ttattgccaagtgaagtaatgacgaaatgggt	Protospacer
********************************

4. spacer 1.8|1317752|32|LR134169|CRISPRCasFinder,CRT matches to position: 902845-902876, mismatch: 0, identity: 1.0

aagaagattgcttagttcgattaaaacatcat	CRISPR spacer
aagaagattgcttagttcgattaaaacatcat	Protospacer
********************************

5. spacer 1.9|1317812|32|LR134169|CRISPRCasFinder,CRT matches to position: 901614-901645, mismatch: 0, identity: 1.0

ctccatttgttcgaatataatggtttggtaaa	CRISPR spacer
ctccatttgttcgaatataatggtttggtaaa	Protospacer
********************************

6. spacer 1.10|1317872|32|LR134169|CRISPRCasFinder,CRT matches to position: 1316461-1316492, mismatch: 0, identity: 1.0

aaaatcgatttctatacactattcgataactg	CRISPR spacer
aaaatcgatttctatacactattcgataactg	Protospacer
********************************

7. spacer 1.11|1317932|32|LR134169|CRISPRCasFinder,CRT matches to position: 889507-889538, mismatch: 0, identity: 1.0

aactccggcatatactaatagtgacatagacg	CRISPR spacer
aactccggcatatactaatagtgacatagacg	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_KX753679	Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence	13943-13974	0	1.0
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NC_002579	Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence	15034-15065	0	1.0
LR134169_1	1.24\|1318714\|32\|LR134169\|CRISPRCasFinder,CRT	1318714-1318745	32	NC_007206	Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence	18032-18063	2	0.938
LR134169_1	1.24\|1318714\|32\|LR134169\|CRISPRCasFinder,CRT	1318714-1318745	32	NC_004846	Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence	17751-17782	2	0.938
LR134169_1	1.24\|1318714\|32\|LR134169\|CRISPRCasFinder,CRT	1318714-1318745	32	NC_004058	Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence	17697-17728	2	0.938
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NC_005913	Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-1, complete sequence	2141-2172	6	0.812
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NC_005913	Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-1, complete sequence	7034-7065	6	0.812
LR134169_1	1.16\|1318232\|33\|LR134169\|CRISPRCasFinder,CRT	1318232-1318264	33	NZ_KX753679	Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence	1660-1692	6	0.818
LR134169_1	1.16\|1318232\|33\|LR134169\|CRISPRCasFinder,CRT	1318232-1318264	33	NC_021724	Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence	10740-10772	6	0.818
LR134169_1	1.16\|1318232\|33\|LR134169\|CRISPRCasFinder,CRT	1318232-1318264	33	NC_002579	Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence	8597-8629	6	0.818
LR134169_1	1.16\|1318232\|33\|LR134169\|CRISPRCasFinder,CRT	1318232-1318264	33	GQ866235	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence	10210-10242	6	0.818
LR134169_1	1.25\|1318774\|32\|LR134169\|CRISPRCasFinder,CRT	1318774-1318805	32	NZ_CP015884	Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence	95522-95553	6	0.812
LR134169_1	1.25\|1318774\|32\|LR134169\|CRISPRCasFinder,CRT	1318774-1318805	32	NZ_CP016746	Lactococcus lactis subsp. cremoris strain JM1 plasmid pMPJM1, complete sequence	122944-122975	6	0.812
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NC_015904	Borreliella bissettii DN127 plasmid cp32-4, complete sequence	27595-27626	7	0.781
LR134169_1	1.4\|1317512\|32\|LR134169\|CRISPRCasFinder,CRT	1317512-1317543	32	NC_013284	Cronobacter turicensis z3032 plasmid pCTU2, complete sequence	8931-8962	7	0.781
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NC_021724	Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence	16197-16228	7	0.781
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	GQ866235	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence	15047-15078	7	0.781
LR134169_1	1.22\|1318594\|32\|LR134169\|CRISPRCasFinder,CRT	1318594-1318625	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1507271-1507302	7	0.781
LR134169_1	1.2\|1317392\|32\|LR134169\|CRISPRCasFinder,CRT	1317392-1317423	32	NZ_CP029389	Acinetobacter defluvii strain WCHA30 plasmid p1_010030, complete sequence	76286-76317	8	0.75
LR134169_1	1.5\|1317572\|32\|LR134169\|CRISPRCasFinder,CRT	1317572-1317603	32	KU708004	Pseudomonas phage phiAH14a, complete genome	44274-44305	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_KX833212	Salmonella enterica subsp. enterica serovar Typhi strain Salmonella Typhi strain Ty004 plasmid pTy004_02 plasmid pTy004_02, complete sequence	253-284	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	127082-127113	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	42181-42212	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP023438	Salmonella enterica strain FORC_074 plasmid pFORC74_3, complete sequence	12356-12387	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	11048-11079	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	8290-8321	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	44753-44784	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	29456-29487	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	24899-24930	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	93237-93268	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	24129-24160	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP037880	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS009991 plasmid pPNCS009991_S1, complete sequence	6210-6241	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP026570	Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence	71120-71151	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	64951-64982	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032388	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_1, complete sequence	28462-28493	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	25014-25045	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP017233	Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence	9143-9174	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	97742-97773	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	8617-8648	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	265962-265993	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	20461-20492	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP054423	Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 plasmid p14-SA00836-0, complete sequence	7240-7271	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	31296-31327	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	5683-5714	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	26442-26473	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	21282-21313	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP027574	Escherichia coli strain 2013C-4081 plasmid unnamed1, complete sequence	24228-24259	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	9770-9801	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	5426-5457	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP029854	Salmonella enterica subsp. enterica serovar Typhi strain 343077_281186 plasmid pK43, complete sequence	33001-33032	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	CP043751	Escherichia coli strain CVM N62675 plasmid pN62675, complete sequence	37115-37146	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	3247-3278	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	14478-14509	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP009103	Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 13311 plasmid pSTY1, complete sequence	25436-25467	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	65375-65406	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	24277-24308	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	54670-54701	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	29457-29488	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP022281	Escherichia coli strain STEC299 plasmid pSTEC299_2, complete sequence	57741-57772	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	34412-34443	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	29458-29489	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP031234	Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_4, complete sequence	19863-19894	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP041175	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12519v2 plasmid p12519B, complete sequence	18440-18471	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP011431	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_IncX, complete sequence	6987-7018	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP047580	Escherichia coli strain 94EC plasmid p94EC-4, complete sequence	7258-7289	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	29457-29488	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	5425-5456	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	5396-5427	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	1370-1401	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	MN125608	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence	48903-48934	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	MN125609	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence	48903-48934	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	45112-45143	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	29153-29184	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_AP019764	Escherichia coli O111:H- strain 110512 plasmid pO111-110512_3, complete sequence	5425-5456	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	59800-59831	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	79234-79265	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	CP054320	Escherichia coli strain SCU-390 plasmid pSCU-390-2, complete sequence	32882-32913	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP024261	Escherichia coli strain F5656C1 plasmid unnamed1, complete sequence	23355-23386	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	12809-12840	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	73569-73600	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	2945-2976	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	33876-33907	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NC_010257	Escherichia coli plasmid MccC7-H22, complete sequence	27449-27480	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP034075	Salmonella enterica subsp. diarizonae strain 16-SA00356 plasmid pSE16-SA00356, complete sequence	7240-7271	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	89325-89356	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	7635-7666	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	61458-61489	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	43939-43970	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	5850-5881	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	37931-37962	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_MF428416	Salmonella enterica subsp. enterica serovar Typhimurium strain ExPB5-59 plasmid pExPB5-59-1, complete sequence	25943-25974	8	0.75
LR134169_1	1.7\|1317692\|32\|LR134169\|CRISPRCasFinder,CRT	1317692-1317723	32	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	32242-32273	8	0.75
LR134169_1	1.8\|1317752\|32\|LR134169\|CRISPRCasFinder,CRT	1317752-1317783	32	NZ_CP015757	Clostridium estertheticum subsp. estertheticum strain DSM 8809 plasmid pDSM8809, complete sequence	20928-20959	8	0.75
LR134169_1	1.12\|1317992\|32\|LR134169\|CRISPRCasFinder,CRT	1317992-1318023	32	NZ_CP044456	Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence	222801-222832	8	0.75
LR134169_1	1.12\|1317992\|32\|LR134169\|CRISPRCasFinder,CRT	1317992-1318023	32	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	223704-223735	8	0.75
LR134169_1	1.12\|1317992\|32\|LR134169\|CRISPRCasFinder,CRT	1317992-1318023	32	NZ_CP039144	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence	46265-46296	8	0.75
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	629-660	8	0.75
LR134169_1	1.19\|1318414\|32\|LR134169\|CRISPRCasFinder,CRT	1318414-1318445	32	MN038175	Panteoa phage Phynn, complete genome	154337-154368	8	0.75
LR134169_1	1.25\|1318774\|32\|LR134169\|CRISPRCasFinder,CRT	1318774-1318805	32	NZ_CP028887	Borrelia turcica IST7 plasmid lp32-B, complete sequence	32113-32144	8	0.75
LR134169_1	1.27\|1318895\|32\|LR134169\|CRISPRCasFinder	1318895-1318926	32	NZ_AP022558	Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence	44276-44307	8	0.75
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NZ_CP032858	Bacillus subtilis subsp. subtilis strain 2RL2-3 plasmid unnamed1, complete sequence	76828-76859	9	0.719
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NZ_CP032873	Bacillus subtilis subsp. subtilis strain 2KL1 plasmid unnamed1, complete sequence	97864-97895	9	0.719
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NZ_CP026534	Bacillus velezensis strain DKU_NT_04 plasmid p1_DKU_NT_04, complete sequence	54550-54581	9	0.719
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	176079-176110	9	0.719
LR134169_1	1.1\|1317332\|32\|LR134169\|CRISPRCasFinder,CRT	1317332-1317363	32	MN694383	Marine virus AFVG_250M176, complete genome	10556-10587	9	0.719
LR134169_1	1.2\|1317392\|32\|LR134169\|CRISPRCasFinder,CRT	1317392-1317423	32	MN693329	Marine virus AFVG_25M470, complete genome	12816-12847	9	0.719
LR134169_1	1.12\|1317992\|32\|LR134169\|CRISPRCasFinder,CRT	1317992-1318023	32	NZ_CP011159	Moraxella ovis strain 199/55 plasmid pMOV1, complete sequence	34336-34367	9	0.719
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP037433	Lactobacillus plantarum strain EM plasmid pEM4, complete sequence	4425-4456	9	0.719
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP035114	Lactobacillus plantarum strain SRCM103295 plasmid unnamed1	29098-29129	9	0.719
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP035114	Lactobacillus plantarum strain SRCM103295 plasmid unnamed1	47593-47624	9	0.719
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP028239	Lactobacillus plantarum strain SRCM101511 plasmid unnamed4, complete sequence	5282-5313	9	0.719
LR134169_1	1.24\|1318714\|32\|LR134169\|CRISPRCasFinder,CRT	1318714-1318745	32	MN694088	Marine virus AFVG_250M454, complete genome	11602-11633	9	0.719
LR134169_1	1.24\|1318714\|32\|LR134169\|CRISPRCasFinder,CRT	1318714-1318745	32	MN694007	Marine virus AFVG_250M456, complete genome	11633-11664	9	0.719
LR134169_1	1.24\|1318714\|32\|LR134169\|CRISPRCasFinder,CRT	1318714-1318745	32	MN694027	Marine virus AFVG_250M455, complete genome	39992-40023	9	0.719
LR134169_1	1.27\|1318895\|32\|LR134169\|CRISPRCasFinder	1318895-1318926	32	MN812211	Flavobacterium phage vB_FspS_laban6-1, complete genome	15415-15446	9	0.719
LR134169_1	1.8\|1317752\|32\|LR134169\|CRISPRCasFinder,CRT	1317752-1317783	32	NC_019749	Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.02, complete sequence	75881-75912	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	553093-553124	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP031815	Klebsiella pneumoniae strain KSB1_7F-sc-2280268 plasmid unnamed1, complete sequence	90569-90600	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	553093-553124	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	551534-551565	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	555781-555812	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	549900-549931	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	553093-553124	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_LT985234	Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence	65602-65633	10	0.688
LR134169_1	1.13\|1318052\|32\|LR134169\|CRISPRCasFinder,CRT	1318052-1318083	32	NZ_CP035203	Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence	14297-14328	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP028980	Lactobacillus plantarum strain LQ80 plasmid pLQ803, complete sequence	19267-19298	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP032755	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed4, complete sequence	19064-19095	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP035561	Lactobacillus plantarum strain SRCM103297 plasmid unnamed5	35151-35182	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP032745	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence	42109-42140	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP032746	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence	23722-23753	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP046263	Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_01, complete sequence	1302-1333	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP020096	Lactobacillus plantarum strain K25 plasmid unnamed3, complete sequence	20645-20676	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP035569	Lactobacillus plantarum strain SRCM103300 plasmid unnamed3	29811-29842	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NC_018611	Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-3, complete sequence	28776-28807	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NC_021904	Lactobacillus plantarum ZJ316 plasmid pLP-ZJ102, complete sequence	34145-34176	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP017955	Lactobacillus plantarum strain C410L1 plasmid unnamed1, complete sequence	41415-41446	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_AP018408	Lactobacillus plantarum strain SN35N plasmid pSN35N-3, complete sequence	21997-22028	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP016700	Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence	48526-48557	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP044365	Lactobacillus paracasei strain TD 062 plasmid unnamed4, complete sequence	30052-30083	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP032660	Lactobacillus pentosus strain ZFM94 plasmid unnamed1, complete sequence	81030-81061	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NC_021519	Lactobacillus plantarum 16 plasmid Lp16H, complete sequence	5883-5914	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP046662	Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence	11665-11696	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP028263	Lactobacillus plantarum strain SRCM102737 plasmid unnamed2, complete sequence	60182-60213	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP028336	Lactobacillus plantarum strain SRCM101167 plasmid unnamed2, complete sequence	29707-29738	10	0.688
LR134169_1	1.23\|1318654\|32\|LR134169\|CRISPRCasFinder,CRT	1318654-1318685	32	NZ_CP032655	Lactobacillus pentosus strain ZFM222 plasmid unnamed1, complete sequence	30712-30743	10	0.688
LR134169_1	1.27\|1318895\|32\|LR134169\|CRISPRCasFinder	1318895-1318926	32	MK448904	Streptococcus phage Javan316, complete genome	14484-14515	10	0.688
LR134169_1	1.20\|1318474\|32\|LR134169\|CRISPRCasFinder,CRT	1318474-1318505	32	AP014396	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S46-C203, * SEQUENCING IN PROGRESS *	4959-4990	11	0.656
LR134169_1	1.27\|1318895\|32\|LR134169\|CRISPRCasFinder	1318895-1318926	32	AB853331	Staphylococcus phage S25-4 DNA, complete genome	13461-13492	11	0.656

1. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 0, identity: 1.0

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
aggcacagaatctttttgtagcaaccactttt	Protospacer
********************************

2. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 0, identity: 1.0

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
aggcacagaatctttttgtagcaaccactttt	Protospacer
********************************

3. spacer 1.24|1318714|32|LR134169|CRISPRCasFinder,CRT matches to NC_007206 (Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence) position: , mismatch: 2, identity: 0.938

accgaaacgtttaccccatttttcatcaaccc	CRISPR spacer
gccgaaacgtttaccccatttttcatcgaccc	Protospacer
.**************************.****

4. spacer 1.24|1318714|32|LR134169|CRISPRCasFinder,CRT matches to NC_004846 (Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence) position: , mismatch: 2, identity: 0.938

accgaaacgtttaccccatttttcatcaaccc	CRISPR spacer
gccgaaacgtttaccccatttttcatcgaccc	Protospacer
.**************************.****

5. spacer 1.24|1318714|32|LR134169|CRISPRCasFinder,CRT matches to NC_004058 (Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence) position: , mismatch: 2, identity: 0.938

accgaaacgtttaccccatttttcatcaaccc	CRISPR spacer
gccgaaacgtttaccccatttttcatcgaccc	Protospacer
.**************************.****

6. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NC_005913 (Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-1, complete sequence) position: , mismatch: 6, identity: 0.812

-aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
taaca-aagagaacctttacaaaatagttaatt	Protospacer
 ****  *.***** ************ ****.

7. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NC_005913 (Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-1, complete sequence) position: , mismatch: 6, identity: 0.812

-aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
taaca-aagagaacctttacaaaatagttaatt	Protospacer
 ****  *.***** ************ ****.

8. spacer 1.16|1318232|33|LR134169|CRISPRCasFinder,CRT matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 6, identity: 0.818

ttgccgaggtgctttttctttttcctttcactt	CRISPR spacer
ttgcctaggtgctttttctttttcagtttcctc	Protospacer
***** ******************  **. **.

9. spacer 1.16|1318232|33|LR134169|CRISPRCasFinder,CRT matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 6, identity: 0.818

ttgccgaggtgctttttctttttcctttcactt	CRISPR spacer
ttcccgaggtgctttttctttttcagtttcctc	Protospacer
** *********************  **. **.

10. spacer 1.16|1318232|33|LR134169|CRISPRCasFinder,CRT matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 6, identity: 0.818

ttgccgaggtgctttttctttttcctttcactt	CRISPR spacer
ttcccgaggtgctttttctttttcagtttcctc	Protospacer
** *********************  **. **.

11. spacer 1.16|1318232|33|LR134169|CRISPRCasFinder,CRT matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 6, identity: 0.818

ttgccgaggtgctttttctttttcctttcactt	CRISPR spacer
ttcccgaggtgctttttctttttcagtttcctc	Protospacer
** *********************  **. **.

12. spacer 1.25|1318774|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP015884 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence) position: , mismatch: 6, identity: 0.812

agcgaataaaaaaatatcgaagttagatggat	CRISPR spacer
agcgaataaaaaaatatttaagttctaatgat	Protospacer
*****************. *****  *  ***

13. spacer 1.25|1318774|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP016746 (Lactococcus lactis subsp. cremoris strain JM1 plasmid pMPJM1, complete sequence) position: , mismatch: 6, identity: 0.812

agcgaataaaaaaatatcgaagttagatggat-	CRISPR spacer
agcgactaaaaaaatattgaagtca-ttgaatt	Protospacer
***** ***********.*****.*  **.**

14. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NC_015904 (Borreliella bissettii DN127 plasmid cp32-4, complete sequence) position: , mismatch: 7, identity: 0.781

aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
aacattaaagaagatttagaaaaattaaaatc	Protospacer
************ ***** ****   . ****

15. spacer 1.4|1317512|32|LR134169|CRISPRCasFinder,CRT matches to NC_013284 (Cronobacter turicensis z3032 plasmid pCTU2, complete sequence) position: , mismatch: 7, identity: 0.781

-tttgaccgctgtaacaagcggtctttttttac	CRISPR spacer
aagtga-cgctgtaacaaggggtctgttttgcc	Protospacer
   *** ************ ***** ****  *

16. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 7, identity: 0.781

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
aagcgcaaaatctttttgtagcaacagcgttc	Protospacer
*.**.**.***************** .* **.

17. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 7, identity: 0.781

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
aagcgcaaaatctttttgtagcaacagcgttc	Protospacer
*.**.**.***************** .* **.

18. spacer 1.22|1318594|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

aagtttcgctaggtgctggcggcgcgaacatc-	CRISPR spacer
cagttgcgctcggtgctggcggcgctgg-atcg	Protospacer
 **** **** ************** .. ***

19. spacer 1.2|1317392|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP029389 (Acinetobacter defluvii strain WCHA30 plasmid p1_010030, complete sequence) position: , mismatch: 8, identity: 0.75

aaatgaaccaaaattaaaacttgttgcttaat	CRISPR spacer
tgctgaaccaaaattaaaactcgatgcaacat	Protospacer
 . ******************.* ***   **

20. spacer 1.5|1317572|32|LR134169|CRISPRCasFinder,CRT matches to KU708004 (Pseudomonas phage phiAH14a, complete genome) position: , mismatch: 8, identity: 0.75

atacaatttcttgatgataaaggcgattacga	CRISPR spacer
atcgaccggcttgatgagaatggcgattacga	Protospacer
**  * .  ******** ** ***********

21. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_KX833212 (Salmonella enterica subsp. enterica serovar Typhi strain Salmonella Typhi strain Ty004 plasmid pTy004_02 plasmid pTy004_02, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

22. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

23. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

24. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP023438 (Salmonella enterica strain FORC_074 plasmid pFORC74_3, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

25. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

26. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

27. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

28. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

29. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

30. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

31. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

32. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP037880 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS009991 plasmid pPNCS009991_S1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

33. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP026570 (Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

34. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

35. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032388 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

36. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

37. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP017233 (Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

38. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

39. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

40. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

41. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

42. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP054423 (Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 plasmid p14-SA00836-0, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

43. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

44. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

45. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

46. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

47. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP027574 (Escherichia coli strain 2013C-4081 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

48. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

49. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

50. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP029854 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_281186 plasmid pK43, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

51. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to CP043751 (Escherichia coli strain CVM N62675 plasmid pN62675, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

52. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

53. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

54. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP009103 (Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 13311 plasmid pSTY1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

55. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

56. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

57. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

58. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

59. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP022281 (Escherichia coli strain STEC299 plasmid pSTEC299_2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

60. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

61. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

62. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP031234 (Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

63. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP041175 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12519v2 plasmid p12519B, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

64. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP011431 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_IncX, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

65. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP047580 (Escherichia coli strain 94EC plasmid p94EC-4, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

66. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

67. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

68. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

69. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

70. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to MN125608 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

71. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to MN125609 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

72. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

73. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

74. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_AP019764 (Escherichia coli O111:H- strain 110512 plasmid pO111-110512_3, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

75. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

76. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

77. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to CP054320 (Escherichia coli strain SCU-390 plasmid pSCU-390-2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

78. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP024261 (Escherichia coli strain F5656C1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

79. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

80. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

81. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

82. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

83. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NC_010257 (Escherichia coli plasmid MccC7-H22, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

84. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP034075 (Salmonella enterica subsp. diarizonae strain 16-SA00356 plasmid pSE16-SA00356, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

85. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

86. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

87. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

88. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

89. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

90. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

91. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_MF428416 (Salmonella enterica subsp. enterica serovar Typhimurium strain ExPB5-59 plasmid pExPB5-59-1, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

92. spacer 1.7|1317692|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 8, identity: 0.75

aataaggttgccgcatacaaagtaattaattt	CRISPR spacer
cagtaagttgcagcatacaaagtaattaaaaa	Protospacer
 *  *.***** *****************

93. spacer 1.8|1317752|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP015757 (Clostridium estertheticum subsp. estertheticum strain DSM 8809 plasmid pDSM8809, complete sequence) position: , mismatch: 8, identity: 0.75

aagaagattgcttagttcgattaaaacatcat	CRISPR spacer
tgtatgattgcttagttaaattaaaacaaaat	Protospacer
 . * ************ .*********  **

94. spacer 1.12|1317992|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttactgaatttatcagaataataggcttttaa	CRISPR spacer
ttgactaagttatcagaataattggctttttt	Protospacer
**. . ** ************* *******

95. spacer 1.12|1317992|32|LR134169|CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.75

ttactgaatttatcagaataataggcttttaa	CRISPR spacer
ttactgaatttataagaatattagagtcaaag	Protospacer
************* ****** ***. *.  *.

96. spacer 1.12|1317992|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttactgaatttatcagaataataggcttttaa	CRISPR spacer
ttgactaagttatcagaataattggctttttt	Protospacer
**. . ** ************* *******

97. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 8, identity: 0.75

aggcacagaatctttttgtagcaaccactttt-	CRISPR spacer
cagcagagaatctttatgtagcaa-cactgccg	Protospacer
 .*** ********* ******** **** ..

98. spacer 1.19|1318414|32|LR134169|CRISPRCasFinder,CRT matches to MN038175 (Panteoa phage Phynn, complete genome) position: , mismatch: 8, identity: 0.75

gccggaacctaaaagaatcgataaagacacac	CRISPR spacer
gcaagtttataaaagactcgatcaagacacac	Protospacer
** .*  . ******* ***** *********

99. spacer 1.25|1318774|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP028887 (Borrelia turcica IST7 plasmid lp32-B, complete sequence) position: , mismatch: 8, identity: 0.75

agcgaataaaaaaatatcgaagttagatggat	CRISPR spacer
aaataataaaaaaatatggaagtaagaatgag	Protospacer
*.  ************* ***** ***  **

100. spacer 1.27|1318895|32|LR134169|CRISPRCasFinder matches to NZ_AP022558 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-1, complete sequence) position: , mismatch: 8, identity: 0.75

gccggaacctaaaagaattgataaagacacac	CRISPR spacer
ccaagaatccaaaagaattgataaagatccaa	Protospacer
 * .***.*.*****************. **

101. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032858 (Bacillus subtilis subsp. subtilis strain 2RL2-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
gacataaaagaaaatttacaaaatggctggat	Protospacer
.**** ****** ***********.* *.. .

102. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032873 (Bacillus subtilis subsp. subtilis strain 2KL1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
gacataaaagaaaatttacaaaatggctggat	Protospacer
.**** ****** ***********.* *.. .

103. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP026534 (Bacillus velezensis strain DKU_NT_04 plasmid p1_DKU_NT_04, complete sequence) position: , mismatch: 9, identity: 0.719

aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
gacataaaagaaaatttacaaaatggctggat	Protospacer
.**** ****** ***********.* *.. .

104. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 9, identity: 0.719

aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
cttattgaagaatatttacaaaatagttggtt	Protospacer
  .***.*****.************* *..*.

105. spacer 1.1|1317332|32|LR134169|CRISPRCasFinder,CRT matches to MN694383 (Marine virus AFVG_250M176, complete genome) position: , mismatch: 9, identity: 0.719

aacattaaagaacatttacaaaataggtaatc	CRISPR spacer
aaaataaaagaacatttacaaaagtagattta	Protospacer
** ** *****************  .*   *

106. spacer 1.2|1317392|32|LR134169|CRISPRCasFinder,CRT matches to MN693329 (Marine virus AFVG_25M470, complete genome) position: , mismatch: 9, identity: 0.719

aaatgaaccaaaattaaaacttgttgcttaat	CRISPR spacer
aaaagaagcaaaattaaaacttgaacaacaaa	Protospacer
*** *** ***************     .**

107. spacer 1.12|1317992|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP011159 (Moraxella ovis strain 199/55 plasmid pMOV1, complete sequence) position: , mismatch: 9, identity: 0.719

ttactgaatttatcagaataataggcttttaa	CRISPR spacer
gaaaccaatttatctgaataataggttttgag	Protospacer
  * . ******** **********.*** *.

108. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP037433 (Lactobacillus plantarum strain EM plasmid pEM4, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ttatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
*. ********* ***.********* . * .

109. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP035114 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ttatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
*. ********* ***.********* . * .

110. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP035114 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ttatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
*. ********* ***.********* . * .

111. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP028239 (Lactobacillus plantarum strain SRCM101511 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ttatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
*. ********* ***.********* . * .

112. spacer 1.24|1318714|32|LR134169|CRISPRCasFinder,CRT matches to MN694088 (Marine virus AFVG_250M454, complete genome) position: , mismatch: 9, identity: 0.719

accgaaacgtttaccccatttttcatcaaccc	CRISPR spacer
ttaatagcgtttaacccatttttcattaacca	Protospacer
 . . *.****** ************.****

113. spacer 1.24|1318714|32|LR134169|CRISPRCasFinder,CRT matches to MN694007 (Marine virus AFVG_250M456, complete genome) position: , mismatch: 9, identity: 0.719

accgaaacgtttaccccatttttcatcaaccc	CRISPR spacer
ttaatagcgtttaacccatttttcattaacca	Protospacer
 . . *.****** ************.****

114. spacer 1.24|1318714|32|LR134169|CRISPRCasFinder,CRT matches to MN694027 (Marine virus AFVG_250M455, complete genome) position: , mismatch: 9, identity: 0.719

accgaaacgtttaccccatttttcatcaaccc	CRISPR spacer
ttaatagcgtttaacccatttttcattaacca	Protospacer
 . . *.****** ************.****

115. spacer 1.27|1318895|32|LR134169|CRISPRCasFinder matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 9, identity: 0.719

gccggaacctaaaagaattgataaagacacac	CRISPR spacer
atcggaatcaaaaagaattgataaattgataa	Protospacer
..*****.* ***************   *.*

116. spacer 1.8|1317752|32|LR134169|CRISPRCasFinder,CRT matches to NC_019749 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.02, complete sequence) position: , mismatch: 10, identity: 0.688

aagaagattgcttagttcgattaaaacatcat	CRISPR spacer
tgaggcaaggcttatttcgattaaaacattat	Protospacer
 .... *  ***** **************.**

117. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
gagaacagcagctttttgtagcaaccatgacg	Protospacer
..* **** * ****************.  .

118. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP031815 (Klebsiella pneumoniae strain KSB1_7F-sc-2280268 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
cagcagagaatctttatgtagcaacaccgccg	Protospacer
 .*** ********* *********  * ..

119. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
gagaacagcagctttttgtagcaaccatgacg	Protospacer
..* **** * ****************.  .

120. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
gagaacagcagctttttgtagcaaccatgacg	Protospacer
..* **** * ****************.  .

121. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
gagaacagcagctttttgtagcaaccatgacg	Protospacer
..* **** * ****************.  .

122. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
gagaacagcagctttttgtagcaaccatgacg	Protospacer
..* **** * ****************.  .

123. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
gagaacagcagctttttgtagcaaccatgacg	Protospacer
..* **** * ****************.  .

124. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_LT985234 (Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
cagcagagaatctttatgtagcaacaccgccg	Protospacer
 .*** ********* *********  * ..

125. spacer 1.13|1318052|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP035203 (Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggcacagaatctttttgtagcaaccactttt	CRISPR spacer
cagcagagaatctttatgtagcaacaccgccg	Protospacer
 .*** ********* *********  * ..

126. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP028980 (Lactobacillus plantarum strain LQ80 plasmid pLQ803, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

127. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032755 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

128. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP035561 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed5) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

129. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032745 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

130. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032746 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

131. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP046263 (Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_01, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

132. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP020096 (Lactobacillus plantarum strain K25 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

133. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP035569 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed3) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

134. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NC_018611 (Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-3, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

135. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NC_021904 (Lactobacillus plantarum ZJ316 plasmid pLP-ZJ102, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

136. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP017955 (Lactobacillus plantarum strain C410L1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

137. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_AP018408 (Lactobacillus plantarum strain SN35N plasmid pSN35N-3, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

138. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

139. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP044365 (Lactobacillus paracasei strain TD 062 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

140. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032660 (Lactobacillus pentosus strain ZFM94 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

141. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NC_021519 (Lactobacillus plantarum 16 plasmid Lp16H, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

142. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP046662 (Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

143. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP028263 (Lactobacillus plantarum strain SRCM102737 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

144. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP028336 (Lactobacillus plantarum strain SRCM101167 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

145. spacer 1.23|1318654|32|LR134169|CRISPRCasFinder,CRT matches to NZ_CP032655 (Lactobacillus pentosus strain ZFM222 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcaaaaggtcaataaaaaatctttgttaa	CRISPR spacer
ctatcaaaaggtaaatgaaaaatcttgaattg	Protospacer
.. ********* ***.********* . * .

146. spacer 1.27|1318895|32|LR134169|CRISPRCasFinder matches to MK448904 (Streptococcus phage Javan316, complete genome) position: , mismatch: 10, identity: 0.688

gccggaacctaaaagaattgataaagacacac	CRISPR spacer
aagagaacctaaaagaaatgacaaagagcgag	Protospacer
.  .************* ***.*****   *

147. spacer 1.20|1318474|32|LR134169|CRISPRCasFinder,CRT matches to AP014396 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S46-C203, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.656

tatcctgctttagaaaatttgaagaactagcc	CRISPR spacer
agtccagctttagaaaattggaagattgcaaa	Protospacer
 .*** ************* ***** .  .

148. spacer 1.27|1318895|32|LR134169|CRISPRCasFinder matches to AB853331 (Staphylococcus phage S25-4 DNA, complete genome) position: , mismatch: 11, identity: 0.656

gccggaacctaaaagaattgataaagacacac	CRISPR spacer
aaaagaacttaaaaaaattgataaagaatgga	Protospacer
.  .****.*****.************   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

454871 : 510453

Mannheimia_phage(64.29%)

tRNA,transposase,head,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB25716.1\|454871_456176_-\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.6e-95	53.5
VEB25717.1\|456293_456773_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.0e-25	44.8
VEB25718.1\|456906_458316_-	Predicted ATPase	NA	NA	NA	NA
VEB25719.1\|458382_459222_+	adenylate cyclase	NA	NA	NA	NA
VEB25720.1\|459264_459714_-	Uncharacterised protein	NA	NA	NA	NA
VEB25721.1\|459710_459875_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB25722.1\|459876_460620_-\|tRNA	tRNA pseudouridine synthase C	NA	NA	NA	NA
VEB25723.1\|460620_460932_-	Domain of uncharacterised function, DUF446	NA	NA	NA	NA
VEB25724.1\|460934_461693_-	filamentation induced by cAMP protein Fic-like protein	D7RWK9	Brochothrix_phage	7.5e-06	25.2
VEB25725.1\|461777_463187_+	bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	A0A0P0IR83	Acinetobacter_phage	1.2e-30	36.8
VEB25726.1\|463402_465406_+\|tRNA	bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase	NA	NA	NA	NA
VEB25727.1\|465701_467081_-	L-serine dehydratase	NA	NA	NA	NA
VEB25728.1\|467176_468406_-	serine transporter	NA	NA	NA	NA
VEB25729.1\|468762_470358_+	heme-binding protein A	NA	NA	NA	NA
VEB25730.1\|470452_471334_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA
VEB25731.1\|471561_472710_+	methionine synthase II (cobalamin-independent)	A0A218MNE0	uncultured_virus	3.1e-144	64.3
VEB25732.1\|472938_473658_-	putative phage repressor	F6MII3	Haemophilus_phage	9.4e-67	60.7
VEB25733.1\|473834_474113_+	putative transcriptional regulator, Nlp	F6MII4	Haemophilus_phage	2.0e-17	61.2
VEB25734.1\|474157_476128_+\|transposase	phage transposase	A0A0M3LPN5	Mannheimia_phage	3.8e-211	58.0
VEB25735.1\|476140_477022_+	Helix-turn-helix	A0A0M3LP72	Mannheimia_phage	3.9e-107	67.9
VEB25736.1\|477033_477231_+	Uncharacterised protein	NA	NA	NA	NA
VEB25737.1\|477227_477539_+	Uncharacterised protein	NA	NA	NA	NA
VEB25738.1\|477559_477847_+	Uncharacterised protein	NA	NA	NA	NA
VEB25739.1\|477818_478037_+	Uncharacterised protein	NA	NA	NA	NA
VEB25740.1\|478046_478664_+	Protein of uncharacterised function (DUF3164)	A0A0M3LQ92	Mannheimia_phage	5.0e-93	82.3
VEB25741.1\|478734_478935_+	Uncharacterised protein	NA	NA	NA	NA
VEB25742.1\|478955_479192_+	Protein of uncharacterised function (DUF2786)	NA	NA	NA	NA
VEB25743.1\|479430_479649_+	Uncharacterised protein	NA	NA	NA	NA
VEB25744.1\|479638_480190_+	Uncharacterised protein	A0A0M3LP85	Mannheimia_phage	2.9e-28	38.1
VEB25745.1\|480191_480431_+	Uncharacterised protein	NA	NA	NA	NA
VEB25746.1\|480503_481070_+	Uncharacterised protein	A0A0M3LPP6	Mannheimia_phage	1.2e-72	72.9
VEB25747.1\|481053_481482_+	Mu-like prophage protein gp16	F6MIJ6	Haemophilus_phage	4.2e-46	66.7
VEB25748.1\|481690_481873_+	Uncharacterised protein	NA	NA	NA	NA
VEB25749.1\|481957_482335_+	Uncharacterised protein	NA	NA	NA	NA
VEB25750.1\|482453_482879_+	Uncharacterized conserved protein	A0A0M3LRS6	Mannheimia_phage	2.3e-33	48.2
VEB25751.1\|482964_483510_+	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	9.9e-69	69.3
VEB25752.1\|483512_483734_+	Protein of uncharacterised function (DUF2644)	F6MIK0	Haemophilus_phage	4.9e-27	88.6
VEB25753.1\|483733_484123_+	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA
VEB25754.1\|484198_484477_+	Uncharacterised protein	NA	NA	NA	NA
VEB25755.1\|484473_484728_+	Uncharacterised protein	A0A0M3LP87	Mannheimia_phage	3.7e-18	57.1
VEB25756.1\|484740_485241_+	Protein of uncharacterised function (DUF1804)	A0A0M3LQI8	Mannheimia_phage	3.1e-77	92.2
VEB25757.1\|485240_485342_+	Uncharacterised protein	NA	NA	NA	NA
VEB25758.1\|485338_486964_+	phage uncharacterized protein, C-terminal domain	A0A0M3LQB7	Mannheimia_phage	1.7e-302	92.8
VEB25759.1\|487007_488648_+	Mu-like prophage protein gp29	A0A0M3LRU4	Mannheimia_phage	3.6e-279	86.8
VEB25760.1\|488634_489924_+\|head	phage head morphogenesis protein, SPP1 gp7 family	B7SDN5	Haemophilus_phage	3.1e-214	83.2
VEB25761.1\|490071_490488_+	Mu-like prophage protein gpG	A0A0M3LSP9	Mannheimia_phage	2.6e-61	84.7
VEB25762.1\|490756_491821_+	Mu-like prophage I protein	A0A0M3LPA7	Mannheimia_phage	3.7e-176	88.9
VEB25763.1\|491820_492738_+\|head	Mu-like prophage major head subunit gpT	B7SDP1	Haemophilus_phage	5.1e-150	85.5
VEB25764.1\|492783_493158_+	Uncharacterised protein	B7SDP3	Haemophilus_phage	1.9e-23	53.5
VEB25765.1\|493157_493583_+	Mu-like prophage protein gp36	A0A0M3LP98	Mannheimia_phage	3.6e-58	80.9
VEB25766.1\|493579_494221_+	Mu-like prophage protein gp37	A0A0M3LQJ7	Mannheimia_phage	6.1e-102	87.3
VEB25767.1\|494221_494401_+	Uncharacterised protein	A0A0M3LQM9	Mannheimia_phage	3.0e-22	88.1
VEB25768.1\|494400_495813_+\|tail	Mu-like prophage tail sheath protein gpL	A0A0M3LQC3	Mannheimia_phage	5.1e-234	90.6
VEB25769.1\|495822_496197_+	Uncharacterised protein	A0A0M3LRV6	Mannheimia_phage	5.8e-52	78.2
VEB25770.1\|496196_496565_+	Uncharacterised protein	A0A0M3LSI2	Mannheimia_phage	3.9e-45	76.2
VEB25771.1\|496642_496789_+	Uncharacterised protein	A0A0M3LSQ8	Mannheimia_phage	7.8e-13	80.4
VEB25772.1\|496842_499023_+\|tail	Phage-related minor tail protein	A0A0M3LPB6	Mannheimia_phage	4.1e-105	41.3
VEB25773.1\|499022_500315_+	Mu-like prophage DNA circulation protein	A0A0M3LQ21	Mannheimia_phage	5.7e-216	87.7
VEB25774.1\|500318_501482_+\|tail	Mu-like prophage tail protein gpP	A0A0M3LPS4	Mannheimia_phage	5.7e-199	92.5
VEB25775.1\|501478_502141_+	Mu-like prophage protein gp45	A0A0M3LPA3	Mannheimia_phage	4.6e-84	73.5
VEB25776.1\|502239_502590_+	Phage protein GP46	A0A0M3LQK5	Mannheimia_phage	2.1e-56	92.2
VEB25777.1\|502601_503663_+	Uncharacterized homolog of phage Mu protein gp47	A0A0M3LQN4	Mannheimia_phage	2.4e-175	87.0
VEB25778.1\|503662_504229_+	Uncharacterized protein conserved in bacteria (DUF2313)	A0A0M3LQE1	Mannheimia_phage	3.9e-68	67.9
VEB25779.1\|504225_506685_+	Uncharacterised protein	A0A0M3LRW6	Mannheimia_phage	8.3e-30	42.7
VEB25780.1\|506687_507302_+	Uncharacterised protein	NA	NA	NA	NA
VEB25781.1\|507302_507758_+	Uncharacterised protein	F6MIM0	Haemophilus_phage	1.6e-43	55.6
VEB25782.1\|507997_508867_-	FAD flavoprotein oxidase	NA	NA	NA	NA
VEB25783.1\|508842_509595_-	FAD flavoprotein oxidase	NA	NA	NA	NA
VEB25784.1\|509646_510453_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-19	33.7

DBSCAN-SWA_2

586208 : 679810

111

Mannheimia_phage(49.12%)

head,plate,integrase,tRNA,protease,terminase,capsid,holin,portal,tail

attL 665225:665244|attR 686311:686330

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB25848.1\|586208_586301_-\|holin	choline/carnitine/betaine transporter	NA	NA	NA	NA
VEB25849.1\|586633_587608_-	dioxygenase	NA	NA	NA	NA
VEB25850.1\|587713_588601_+	transcriptional regulator	NA	NA	NA	NA
VEB25851.1\|588901_589999_+	ATPase	NA	NA	NA	NA
VEB25852.1\|590263_592177_+	type I modification enzyme	A0A1W6JNK1	Staphylococcus_phage	4.0e-157	46.6
VEB25853.1\|592169_593300_+	Restriction enzyme BgcI subunit beta	A0A1W6JNN3	Staphylococcus_phage	2.0e-31	26.8
VEB25854.1\|593380_593815_+	Restriction enzyme BgcI subunit beta	NA	NA	NA	NA
VEB25855.1\|594108_594927_+	Uncharacterised protein	NA	NA	NA	NA
VEB25856.1\|595096_595621_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	1.1e-43	57.2
VEB25857.1\|595771_598600_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.4
VEB25858.1\|598736_598949_-	Uncharacterised protein	NA	NA	NA	NA
VEB25859.1\|599069_600992_+	ATP-dependent helicase	A0A127AW80	Bacillus_phage	4.1e-93	31.3
VEB25860.1\|601058_601418_+	putative effector of murein hydrolase LrgA	NA	NA	NA	NA
VEB25861.1\|601427_602114_+	putative effector of murein hydrolase	NA	NA	NA	NA
VEB25862.1\|602218_603967_+	lipid transporter ATP-binding/permease	W8CYL7	Bacillus_phage	1.5e-57	29.9
VEB25863.1\|604095_604728_+	outer membrane lipoprotein LolB	NA	NA	NA	NA
VEB25864.1\|604737_605595_+	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
VEB25865.1\|605606_606557_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	8.1e-42	38.4
VEB25866.1\|606630_607638_+	dihydroorotate dehydrogenase 2	NA	NA	NA	NA
VEB25867.1\|607992_610647_+	pyruvate dehydrogenase subunit E1	NA	NA	NA	NA
VEB25868.1\|610706_612605_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
VEB25869.1\|612700_614125_+	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-43	27.7
VEB25870.1\|614717_615926_+\|integrase	Prophage CP4-57 integrase	A0A2H4J5F8	uncultured_Caudovirales_phage	1.3e-47	33.0
VEB25871.1\|616019_616181_-	prophage CP4-57 regulatory protein	NA	NA	NA	NA
VEB25872.1\|616177_616633_-	Uncharacterised protein	NA	NA	NA	NA
VEB25873.1\|616642_617026_-	Uncharacterised protein	NA	NA	NA	NA
VEB25874.1\|617031_617226_-	Uncharacterised protein	NA	NA	NA	NA
VEB25875.1\|617237_617672_-	Uncharacterized protein conserved in bacteria	S5M9Z4	Pseudoalteromonas_phage	6.7e-36	56.0
VEB25876.1\|617765_618224_-	single-strand binding protein	F8TUL2	EBPR_podovirus	5.4e-36	49.7
VEB25877.1\|618240_620532_-	Bacteriophage replication gene A protein (GPA)	Q1I108	Pasteurella_virus	1.6e-168	47.7
VEB25878.1\|620528_620708_-	Uncharacterised protein	NA	NA	NA	NA
VEB25879.1\|620685_620826_-	Uncharacterised protein	NA	NA	NA	NA
VEB25880.1\|620822_621278_-	Uncharacterised protein	NA	NA	NA	NA
VEB25881.1\|621280_621610_-	Uncharacterised protein	Q19UT2	Mannheimia_phage	3.5e-21	59.8
VEB25882.1\|622047_622260_-	Uncharacterized protein conserved in bacteria, prophage-related	Q19UN8	Mannheimia_phage	7.6e-17	68.9
VEB25883.1\|622374_623064_+	putative phage repressor	A0A0M3LPF9	Mannheimia_phage	1.1e-77	64.6
VEB25884.1\|623092_623476_+	Uncharacterised protein	NA	NA	NA	NA
VEB25885.1\|623621_623804_+	YcfA-like protein	D6R431	Bacillus_phage	3.4e-18	73.3
VEB25886.1\|623827_624235_+	Uncharacterised protein family (UPF0150)	Q775F5	Haemophilus_virus	2.0e-45	65.9
VEB25887.1\|624246_624639_+	Uncharacterised protein	NA	NA	NA	NA
VEB25888.1\|624635_624983_-	Phage protein D	Q19UP4	Mannheimia_phage	6.8e-39	68.7
VEB25889.1\|625090_625861_-	Phage protein D	A0A0M3LPR9	Mannheimia_phage	6.9e-92	68.4
VEB25890.1\|625860_626298_-	Phage protein U	A0A0M3LQ18	Mannheimia_phage	2.1e-53	68.3
VEB25891.1\|626304_626472_-	Uncharacterised protein	NA	NA	NA	NA
VEB25892.1\|626686_626983_-\|tail	Phage tail protein E	Q19UP7	Mannheimia_phage	1.8e-24	60.0
VEB25893.1\|627039_627546_-\|tail	phage major tail tube protein	Q19UP8	Mannheimia_phage	1.2e-65	69.6
VEB25894.1\|627551_628745_-\|tail	Phage tail sheath protein	A0A0M3LPE9	Mannheimia_phage	1.3e-185	80.7
VEB25895.1\|628849_629104_-	Uncharacterised protein	A0A0M3LNN9	Mannheimia_phage	6.3e-26	70.0
VEB25896.1\|629093_629732_-	Uncharacterised protein	A0A0M3LRX2	Mannheimia_phage	2.6e-60	68.4
VEB25897.1\|629733_632412_-	Uncharacterised protein	A0A0M3LS19	Mannheimia_phage	5.4e-83	59.4
VEB25898.1\|632408_632957_-\|tail	Bacteriophage P2-related tail formation protein	Q19UQ4	Mannheimia_phage	2.8e-55	60.1
VEB25899.1\|632943_633861_-	Uncharacterized homolog of phage Mu protein gp47	Q19UQ5	Mannheimia_phage	1.0e-105	64.6
VEB25900.1\|633857_634196_-	Gene 25-like lysozyme	Q19UQ6	Mannheimia_phage	4.0e-28	58.2
VEB25901.1\|634192_634795_-\|plate	Phage P2 baseplate assembly protein gpV	A0A0M3LPY9	Mannheimia_phage	3.6e-35	52.9
VEB25902.1\|634924_637471_-\|tail	putative tail protein	A0A2H4JE61	uncultured_Caudovirales_phage	8.4e-94	34.5
VEB25903.1\|637474_637933_-	Mu-like prophage protein gpG	Q19UR2	Mannheimia_phage	3.0e-26	45.2
VEB25904.1\|637916_638423_-\|tail	P2 phage tail completion protein R (GpR)	Q19UR3	Mannheimia_phage	1.9e-42	57.6
VEB25905.1\|638419_638638_-	conjugal transfer protein TraR	A0A0M3LS11	Mannheimia_phage	6.2e-22	71.2
VEB25906.1\|638832_639219_-	Uncharacterised protein	NA	NA	NA	NA
VEB25907.1\|639203_639722_-	endolysin	A0A0M3LPQ1	Mannheimia_phage	3.3e-37	48.3
VEB25908.1\|639708_639912_-	Uncharacterised protein	Q19UR7	Mannheimia_phage	1.2e-06	54.2
VEB25909.1\|639916_640129_-	Phage Tail Protein X	A0A0M3LPY0	Mannheimia_phage	5.4e-15	58.6
VEB25910.1\|640137_640650_-\|head	Phage head completion protein (GPL)	A0A0M3LNL8	Mannheimia_phage	4.2e-61	71.0
VEB25911.1\|640770_641451_-\|terminase	Phage small terminase subunit	A0A0M3LP11	Mannheimia_phage	9.2e-56	52.3
VEB25912.1\|641450_642491_-\|capsid	phage major capsid protein, P2 family	A0A0M3LPD2	Mannheimia_phage	7.3e-121	64.1
VEB25913.1\|642535_643360_-\|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	A0A0M3LSA0	Mannheimia_phage	3.5e-57	46.6
VEB25914.1\|643528_645337_+	Uncharacterized conserved protein	Q19UT5	Mannheimia_phage	3.2e-281	78.8
VEB25915.1\|645412_646345_+\|portal	phage portal protein, PBSX family	Q19UT6	Mannheimia_phage	2.3e-121	65.6
VEB25916.1\|647021_647327_-	Uncharacterised protein	NA	NA	NA	NA
VEB25917.1\|647405_649049_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic	NA	NA	NA	NA
VEB25918.1\|649129_649492_-	diacylglycerol kinase	NA	NA	NA	NA
VEB25919.1\|649740_650955_+	serine/threonine transporter SstT	NA	NA	NA	NA
VEB25920.1\|651054_652908_+	recombination protein 2	NA	NA	NA	NA
VEB25921.1\|653381_654467_-\|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
VEB25922.1\|654514_655444_-	Uncharacterised protein family UPF0052	A1IMD5	Streptococcus_phage	3.2e-27	29.3
VEB25923.1\|655496_656558_-	putative permease	NA	NA	NA	NA
VEB25924.1\|656616_657372_-	SAM-dependent methyltransferase	NA	NA	NA	NA
VEB25925.1\|657539_657782_+	Alternative ribosome-rescue factor A	NA	NA	NA	NA
VEB25926.1\|658259_658658_+\|tail	Minor tail protein U	NA	NA	NA	NA
VEB25927.1\|658667_659855_+\|capsid	phage major capsid protein, HK97 family	A0A2H4JED2	uncultured_Caudovirales_phage	8.3e-137	65.6
VEB25928.1\|659928_660501_+\|head,protease	prohead protease (GP4)	A0A2H4JB68	uncultured_Caudovirales_phage	2.4e-49	55.3
VEB25929.1\|660502_661735_+	Portal protein (GP3)	A0A2H4JFJ9	uncultured_Caudovirales_phage	2.6e-133	58.5
VEB25930.1\|661718_662066_+\|head,tail	phage head-tail adaptor	NA	NA	NA	NA
VEB25931.1\|662055_662364_+	bacteriophage protein	A0A2D1GNK0	Pseudomonas_phage	8.5e-09	34.0
VEB25932.1\|662378_662729_+	phage associated protein	NA	NA	NA	NA
VEB25933.1\|662898_663258_+	bacteriophage protein	A0A2H4JHS3	uncultured_Caudovirales_phage	1.3e-40	68.7
VEB25934.1\|663254_664925_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	1.4e-243	70.4
VEB25935.1\|664924_665176_+	Uncharacterised protein	NA	NA	NA	NA
VEB25936.1\|665172_665640_+	HK97 family phage protein	NA	NA	NA	NA
665225:665244	attL	NA	NA	NA	NA
VEB25937.1\|665704_665905_+	Uncharacterised protein	NA	NA	NA	NA
VEB25938.1\|666000_666969_+	Uncharacterised protein	NA	NA	NA	NA
VEB25939.1\|667103_667301_+	Predicted transcriptional regulator	NA	NA	NA	NA
VEB25940.1\|667312_667675_+	Uncharacterised protein	NA	NA	NA	NA
VEB25941.1\|667820_667985_+	Uncharacterised protein	NA	NA	NA	NA
VEB25942.1\|668460_668625_+	Uncharacterised protein	NA	NA	NA	NA
VEB25943.1\|668617_668842_+	Uncharacterised protein	NA	NA	NA	NA
VEB25944.1\|668851_669193_+	Uncharacterised protein	NA	NA	NA	NA
VEB25945.1\|669185_669374_+	Uncharacterised protein	NA	NA	NA	NA
VEB25946.1\|669366_669792_+	Uncharacterised protein	NA	NA	NA	NA
VEB25947.1\|669778_670309_+	primase	NA	NA	NA	NA
VEB25948.1\|670317_671580_+	primase	Q7M2A8	Enterobacteria_phage	9.3e-78	38.4
VEB25949.1\|671750_672410_-\|integrase	Prophage CP4-57 integrase	A0A1V0E8G8	Vibrio_phage	1.2e-39	40.0
VEB25950.1\|672390_672954_-\|integrase	Prophage CP4-57 integrase	A0A1B5FPC6	Escherichia_phage	1.1e-25	33.9
VEB25951.1\|673296_674109_-	diadenosine tetraphosphatase	S4TT53	Salmonella_phage	1.2e-09	35.6
VEB25952.1\|674133_674820_-	putative effector of murein hydrolase	NA	NA	NA	NA
VEB25953.1\|674816_675188_-	putative effector of murein hydrolase LrgA	NA	NA	NA	NA
VEB25954.1\|675262_677239_-	exoribonuclease II	Q0GXV6	Lactococcus_phage	6.6e-30	27.6
VEB25955.1\|677370_677649_-	Uncharacterized protein conserved in bacteria	K4NZP3	Burkholderia_phage	2.3e-05	40.5
VEB25956.1\|677623_677902_-	Protein of uncharacterised function (DUF497)	NA	NA	NA	NA
VEB25957.1\|678096_678885_-	enoyl-(acyl carrier protein) reductase	NA	NA	NA	NA
VEB25958.1\|679084_679810_-	S-adenosyl-L-methionine-dependent methyltransferase	F5B419	Synechococcus_phage	2.1e-21	29.6
686311:686330	attR	NA	NA	NA	NA

DBSCAN-SWA_3

830455 : 912020

106

Mannheimia_phage(32.65%)

integrase,tRNA,protease,terminase,holin,tail

attL 825107:825125|attR 865671:865689

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
825107:825125	attL	NA	NA	NA	NA
VEB26110.1\|830455_831319_-\|protease	Predicted metalloprotease	A0A1I9SA48	Rhodococcus_phage	1.8e-32	35.8
VEB26111.1\|831503_834374_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	3.3e-78	41.0
VEB26112.1\|834385_834868_-	leucine-responsive transcriptional regulator	NA	NA	NA	NA
VEB26113.1\|834952_836068_-	ribonuclease D	NA	NA	NA	NA
VEB26114.1\|836246_837437_+	transcriptional regulator/sugar kinase	NA	NA	NA	NA
VEB26115.1\|837490_838210_+	dithiobiotin synthetase	NA	NA	NA	NA
VEB26116.1\|838638_839286_+	Transposase and inactivated derivatives	NA	NA	NA	NA
VEB26117.1\|839566_840091_-	lipoprotein	A0A217EQL1	Bacillus_phage	1.6e-15	38.1
VEB26118.1\|840150_840447_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.1e-13	41.1
VEB26119.1\|840464_842852_-\|tRNA	phenylalanyl-tRNA synthetase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.8e-05	25.5
VEB26120.1\|842949_843936_-\|tRNA	phenylalanyl-tRNA synthetase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	4.6e-32	37.1
VEB26121.1\|844217_844880_+	putative NAD(P)H nitroreductase	NA	NA	NA	NA
VEB26122.1\|844981_846307_-	proton glutamate symport protein	NA	NA	NA	NA
VEB26123.1\|846405_847176_-	Zn-ribbon-containing, possibly nucleic-acid-binding protein	NA	NA	NA	NA
VEB26124.1\|847156_848080_-	cation-efflux pump FieF	NA	NA	NA	NA
VEB26125.1\|848105_848651_-	Uncharacterised protein	NA	NA	NA	NA
VEB26126.1\|848650_849433_-	Protein of uncharacterised function (DUF328)	NA	NA	NA	NA
VEB26127.1\|849554_849950_-	30S ribosomal protein S9	NA	NA	NA	NA
VEB26128.1\|849966_850395_-	50S ribosomal protein L13	NA	NA	NA	NA
VEB26129.1\|850699_851098_+	Putative cytochrome d ubiquinol oxidase subunit 3	NA	NA	NA	NA
VEB26130.1\|851130_853683_-	PII uridylyl-transferase	NA	NA	NA	NA
VEB26131.1\|853789_854599_-	tyrosine-specific transport protein 2	NA	NA	NA	NA
VEB26132.1\|854637_855006_-	tyrosine-specific transport protein 2	NA	NA	NA	NA
VEB26133.1\|855181_856315_-	tyrosine-specific transporter	NA	NA	NA	NA
VEB26134.1\|856552_857902_-\|protease	cell division protease FtsH-like protein	M4QMW8	Micromonas_pusilla_virus	1.8e-95	49.0
VEB26135.1\|857901_858483_-\|protease	cell division protease FtsH-like protein	E4WLN5	Ostreococcus_tauri_virus	3.2e-09	36.8
VEB26136.1\|858577_859204_-	23S rRNA methyltransferase J	NA	NA	NA	NA
VEB26137.1\|859457_860921_+	inosine 5'-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.8e-94	40.2
VEB26138.1\|861030_861999_+	Protein of uncharacterised function (DUF2806)	NA	NA	NA	NA
VEB26139.1\|862010_863582_+	GMP synthase	NA	NA	NA	NA
VEB26140.1\|863784_864984_+\|integrase	integrase	G9L697	Escherichia_phage	2.9e-129	57.5
VEB26141.1\|865034_865283_-	Uncharacterised protein	A0A0M3LNN9	Mannheimia_phage	2.7e-21	64.9
VEB26142.1\|865272_865911_-	Uncharacterised protein	A0A0M3LRX2	Mannheimia_phage	2.6e-60	68.4
865671:865689	attR	NA	NA	NA	NA
VEB26143.1\|865912_868420_-	Uncharacterised protein	A0A0M3LS19	Mannheimia_phage	2.7e-28	63.6
VEB26144.1\|868422_869031_-	Protein of uncharacterised function (DUF2612)	NA	NA	NA	NA
VEB26145.1\|869039_870479_-	Uncharacterized homolog of phage Mu protein gp47	M4SNA9	Psychrobacter_phage	6.8e-16	28.4
VEB26146.1\|870478_870841_-	Uncharacterised protein	A0A0A1IWV2	Pseudomonas_phage	1.0e-13	40.2
VEB26147.1\|870837_871461_-	Mu-like prophage protein gp45	A0A2H4YGW5	Raoultella_phage	1.2e-06	27.3
VEB26148.1\|871500_872478_-	Uncharacterised protein	M1F267	Cronobacter_phage	8.7e-15	22.9
VEB26149.1\|872610_872931_-	Uncharacterised protein	NA	NA	NA	NA
VEB26150.1\|872932_873556_-	Uncharacterised protein	NA	NA	NA	NA
VEB26151.1\|873603_874281_-	Uncharacterised protein	NA	NA	NA	NA
VEB26152.1\|874326_876474_-\|tail	putative tail protein	H9EB42	Vibrio_phage	1.3e-31	32.4
VEB26153.1\|876530_876674_-	Uncharacterised protein	NA	NA	NA	NA
VEB26154.1\|876724_877171_-	Uncharacterised protein	NA	NA	NA	NA
VEB26155.1\|877160_877295_-	Uncharacterised protein	NA	NA	NA	NA
VEB26156.1\|877267_877594_-	Protein of uncharacterised function (DUF3277)	A0A142IE16	Pseudomonas_phage	1.5e-08	43.8
VEB26157.1\|877661_879002_-	Protein of uncharacterised function (DUF3383)	A0A0N9SJA3	Pseudomonas_phage	2.2e-77	39.6
VEB26158.1\|878994_879498_-	Uncharacterised protein	NA	NA	NA	NA
VEB26159.1\|879481_879838_-	Uncharacterised protein	NA	NA	NA	NA
VEB26160.1\|879837_880281_-	Uncharacterised protein	A0A2K9V3I1	Faecalibacterium_phage	4.3e-14	33.1
VEB26161.1\|880267_880621_-	Uncharacterised protein	NA	NA	NA	NA
VEB26162.1\|880623_880782_-	Uncharacterised protein	NA	NA	NA	NA
VEB26163.1\|880784_881732_-	Uncharacterized protein conserved in bacteria	A0A0N9SG07	Pseudomonas_phage	4.6e-53	38.3
VEB26164.1\|881811_882255_-	Uncharacterised protein	NA	NA	NA	NA
VEB26165.1\|882265_883321_-	Uncharacterized protein conserved in bacteria	E5AGA6	Erwinia_phage	4.3e-52	36.8
VEB26166.1\|883622_884099_-	Uncharacterised protein	NA	NA	NA	NA
VEB26167.1\|884073_885345_-	phage-associated protein, HI1409 family	A0A291LBE2	Klebsiella_phage	5.8e-27	26.6
VEB26168.1\|885346_886696_-	Uncharacterized conserved protein	A0A220NQL3	Acinetobacter_phage	2.9e-146	59.2
VEB26169.1\|886676_887207_-\|terminase	phage small subunit terminase	A0A1X9SFE5	Acinetobacter_phage	1.5e-21	48.6
VEB26170.1\|887220_887331_-	Uncharacterised protein	A0A0M3LPX2	Mannheimia_phage	4.3e-08	83.3
VEB26171.1\|887509_888163_-	DNA adenine methyltransferase YhdJ	A0A1P8CMS8	Staphylococcus_phage	8.6e-35	34.4
VEB26172.1\|888363_888726_-	Protein of uncharacterised function (DUF2570)	NA	NA	NA	NA
VEB26173.1\|888727_889345_-	chitinase	Q7Y5V0	Haemophilus_phage	2.0e-57	55.7
VEB26174.1\|889346_889517_-\|holin	phage holin	NA	NA	NA	NA
VEB26175.1\|889500_889722_-\|holin	phage holin	NA	NA	NA	NA
VEB26176.1\|890007_890652_+	Uncharacterised protein	NA	NA	NA	NA
VEB26177.1\|890658_892248_+	ATP-dependent DNA helicase RecG	A0A2H4JBR2	uncultured_Caudovirales_phage	4.7e-26	28.6
VEB26178.1\|892244_893165_+	putative methyltransferase	A0A0M3LSW2	Mannheimia_phage	8.7e-25	51.6
VEB26179.1\|893296_893701_+	Uncharacterised protein	NA	NA	NA	NA
VEB26180.1\|893748_894123_-	Phage antitermination protein Q	NA	NA	NA	NA
VEB26181.1\|894138_894456_-	Holliday junction resolvase	K7P6W0	Enterobacteria_phage	1.3e-36	64.7
VEB26182.1\|894490_894787_-	82 prophage-derived uncharacterized protein ybcO	A0A0M3LQ97	Mannheimia_phage	2.7e-28	65.3
VEB26183.1\|894817_894916_-	Uncharacterised protein	NA	NA	NA	NA
VEB26184.1\|894912_895056_-	Uncharacterised protein	NA	NA	NA	NA
VEB26185.1\|895294_895519_-	Uncharacterised protein	NA	NA	NA	NA
VEB26186.1\|895533_895971_-	Protein of uncharacterised function (DUF1367)	A0A0M3LR84	Mannheimia_phage	5.5e-54	65.5
VEB26187.1\|895984_896932_-	type I restriction enzyme EcoR124II M protein	A0A0M3LQ47	Mannheimia_phage	1.2e-106	64.1
VEB26188.1\|897089_898499_-	replicative DNA helicase	Q7Y5V9	Haemophilus_phage	2.8e-147	56.6
VEB26189.1\|898495_899377_-	phage replication protein O, N-terminal domain	A0A0N7KZ97	Stx2-converting_phage	6.6e-30	33.2
VEB26190.1\|899345_899531_-	Uncharacterised protein	A0A0M3LPV5	Mannheimia_phage	4.2e-11	69.4
VEB26191.1\|899691_900063_+	Uncharacterised protein	NA	NA	NA	NA
VEB26192.1\|900087_900333_-	Uncharacterised protein	A0A0M3LTF5	Mannheimia_phage	5.3e-22	80.6
VEB26193.1\|900353_900560_-	HTH-type transcriptional regulator	A0A0M3LSY2	Mannheimia_phage	1.1e-17	63.2
VEB26194.1\|900690_900960_+	Helix-turn-helix domain	A0A0M3LSL8	Mannheimia_phage	2.5e-17	53.4
VEB26195.1\|901082_901346_+	LexA repressor	A0A0M3LSL8	Mannheimia_phage	1.9e-41	92.0
VEB26196.1\|901443_901818_+	Uncharacterised protein	NA	NA	NA	NA
VEB26197.1\|901970_902711_+	Abortive infection bacteriophage resistance protein	NA	NA	NA	NA
VEB26198.1\|902742_902892_-	Uncharacterised protein	NA	NA	NA	NA
VEB26199.1\|903180_903408_+	Uncharacterised protein	A0A0M3LQL0	Mannheimia_phage	3.2e-21	62.7
VEB26200.1\|903824_904055_+	Uncharacterised protein	NA	NA	NA	NA
VEB26201.1\|904396_904627_+	Uncharacterised protein	NA	NA	NA	NA
VEB26202.1\|904630_905122_+	Uncharacterised protein	NA	NA	NA	NA
VEB26203.1\|905125_906082_+	phage recombinase	A0A0M3LNU3	Mannheimia_phage	8.5e-132	78.8
VEB26204.1\|906065_906755_+	YqaJ-like viral recombinase domain	A0A0M3LP90	Mannheimia_phage	5.2e-83	67.9
VEB26205.1\|906758_906959_+	Uncharacterised protein	NA	NA	NA	NA
VEB26206.1\|907006_907576_+	recombination associated protein	S4TWL4	Salmonella_phage	5.9e-32	44.9
VEB26207.1\|907712_907910_+	recombination associated protein	Q71TA1	Escherichia_phage	7.1e-09	49.1
VEB26208.1\|908205_908445_+	Uncharacterised protein	NA	NA	NA	NA
VEB26209.1\|908560_908650_+	Uncharacterised protein	NA	NA	NA	NA
VEB26210.1\|908630_909086_+	Uncharacterized protein conserved in bacteria	S5M9Z4	Pseudoalteromonas_phage	1.1e-31	51.4
VEB26211.1\|909078_909279_+	Uncharacterised protein	NA	NA	NA	NA
VEB26212.1\|909600_909741_+	Uncharacterised protein	NA	NA	NA	NA
VEB26213.1\|909876_910734_+	Uncharacterised protein	NA	NA	NA	NA
VEB26214.1\|910763_910925_+	Predicted transcriptional regulator	NA	NA	NA	NA
VEB26215.1\|911132_912020_-	phosphomannomutase	A0A1X9I671	Streptococcus_phage	4.0e-43	33.9

DBSCAN-SWA_4

1109252 : 1115898

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB26400.1\|1109252_1110545_+	aminopeptidase B	Q6GYZ8	Mycoplasma_phage	1.8e-31	33.2
VEB26401.1\|1110672_1111608_+	phosphosugar isomerase	A0A2P0VNK5	Tetraselmis_virus	7.0e-38	35.0
VEB26402.1\|1111617_1112106_+	transcription elongation factor GreB	NA	NA	NA	NA
VEB26403.1\|1112196_1112658_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	7.9e-43	59.5
VEB26404.1\|1112768_1113974_-	riboflavin biosynthesis protein ribA	A0A2H4PQS2	Staphylococcus_phage	5.0e-97	46.7
VEB26405.1\|1114034_1114682_-	riboflavin synthase subunit alpha	A0A2H4PQS5	Staphylococcus_phage	9.1e-45	43.7
VEB26406.1\|1114803_1115898_-	riboflavin biosynthesis protein	A0A1V0SE20	Indivirus	3.3e-47	33.9

DBSCAN-SWA_5

1386476 : 1395591

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB26651.1\|1386476_1387109_+	LexA repressor	A0A2H4JG58	uncultured_Caudovirales_phage	1.2e-09	48.5
VEB26652.1\|1387168_1387849_+	DNA mismatch repair protein MutH	NA	NA	NA	NA
VEB26653.1\|1387934_1388666_+	integral membrane protein, YkoY family	A0A0R6PEZ3	Moraxella_phage	8.1e-42	48.0
VEB26654.1\|1388780_1389818_+	beta-hexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	6.8e-18	42.9
VEB26655.1\|1389898_1391074_+	23S rRNA methyluridine methyltransferase	A0A2P1ELP3	Moumouvirus	8.0e-15	32.1
VEB26656.1\|1391280_1392591_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	1.2e-131	59.4
VEB26657.1\|1392669_1393299_+	NUDIX hydrolase	NA	NA	NA	NA
VEB26658.1\|1393313_1393724_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB26659.1\|1393782_1395591_-	ATP-dependent DNA helicase	A0A1V0SBK0	Catovirus	1.7e-85	37.5

DBSCAN-SWA_6

1715805 : 1723426

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB26983.1\|1715805_1717665_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	2.2e-35	33.1
VEB26984.1\|1717770_1719513_-	DNA primase	A0A1B0WMR3	Flavobacterium_phage	7.4e-33	29.2
VEB26985.1\|1719689_1719905_-	30S ribosomal protein S21	NA	NA	NA	NA
VEB26986.1\|1720025_1720568_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.9e-54	53.6
VEB26987.1\|1720567_1721443_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.3e-43	39.2
VEB26988.1\|1721442_1722321_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.7e-108	65.6
VEB26989.1\|1722361_1723426_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.3e-100	54.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage