CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134171	Haemophilus influenzae strain NCTC12699 genome assembly, chromosome: 1	3 crisprs	DinG,DEDDh,csx1,csx16,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas3,WYL,RT	0	5	5	0

1. LR134171

CRISPR-Cas detection and classification

Crispr_ID: LR134171_1

• CRISPR_ID: LR134171_1
• CRISPR_location: 711052-711232
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: csx1,csx16,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

Consensus repeat of LR134171_1

Consensus_repeat	Method
GTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGAC	CRISPRCasFinder
GTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGAC	PILER-CR

spacers of LR134171_1

>1.1|711089|34|LR134171|CRISPRCasFinder
TTAAATAATTTTGTGGAAATGGAAGTAGAAAACG
>1.2|711160|36|LR134171|CRISPRCasFinder
GCTGACTCTATTGAGTCAGTAGCGGGTTCTGCGTTT
>1.3|711094|34|LR134171|PILER-CR
TTAAATAATTTTGTGGAAATGGAAGTAGAAAACG
>1.4|711165|36|LR134171|PILER-CR
GCTGACTCTATTGAGTCAGTAGCGGGTTCTGCGTTT

CRISPR arrays and Neighbor proteins around LR134171_1

CRISPR arrays

The CRISPR arrays of LR134171_1

>merge|LR134171|1|711052-711232|CRISPRCasFinder,PILER-CR
ATTTTAATCCCTTTGGAACAGGGCAATGTCTTTCGACTTAAATAATTTTGTGGAAATGGAAGTAGAAAACGGTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGACGCTGACTCTATTGAGTCAGTAGCGGGTTCTGCGTTTGTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGAC

>LR134171|1|1|711052-711232|CRISPRCasFinder
ATTTTAATCCCTTTGGAACAGGGCAATGTCTTTCGAC	TTAAATAATTTTGTGGAAATGGAAGTAGAAAACG
GTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGAC	GCTGACTCTATTGAGTCAGTAGCGGGTTCTGCGTTT
GTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGAC

>LR134171|1|1|711057-711232|PILER-CR
AATCCCTTTGGAACAGGGCAATGTCTTTCGACTTAAA	TAATTTTGTGGAAATGGAAGTAGAAAACGGTCTC
AATCCCTTTGGAACAGGGCAATGTCTTTCGACGCTGA	CTCTATTGAGTCAGTAGCGGGTTCTGCGTTTGTCTC
AATCCCTTTGGAACAGGGCAATGTCTTTCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl|CDD|187793
LR134171.1|VEB28311.1|707939_708449_-|peptidyl-prolyl-cis-trans-isomerase-B	unknown	unknown	gnl|CDD|182734
LR134171.1|VEB28312.1|708551_709931_+|cysteinyl-tRNA-synthetase	unknown	unknown	gnl|CDD|234705
LR134171.1|VEB28306.1|705003_705999_+|fermentative-D-lactate-dehydrogenase,-NAD-dependent	unknown	unknown	gnl|CDD|240659
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	csx1	pfam09002_csx1_CAS-III	gnl|CDD|312526
LR134171.1|VEB28308.1|706491_706767_-|Uncharacterised-protein	unknown	unknown	gnl|CDD|239427
LR134171.1|VEB28304.1|701753_703031_+|threonine-synthase	unknown	unknown	gnl|CDD|236418
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	csx1	pfam09623_csx1_CAS-III	gnl|CDD|187872
LR134171.1|VEB28305.1|703881_704991_+|cystathionine-gamma-synthase	unknown	unknown	gnl|CDD|181320
LR134171.1|VEB28307.1|706118_706442_+|thioredoxin-1	unknown	unknown	gnl|CDD|200072
LR134171.1|VEB28324.1|723498_723726_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28313.1|710091_710952_-|acyl-CoA-thioesterase-II	unknown	unknown	gnl|CDD|224857
LR134171.1|VEB28309.1|706825_707035_-|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl|CDD|187794
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl|CDD|367635
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl|CDD|370601
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
LR134171.1|VEB28310.1|707096_707885_-|DNase	unknown	unknown	gnl|CDD|223162

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	9.7e-26	85.3	5.4
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	9.7e-16	53.2	3.3
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	9e-115	378.0	0.1
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	csx1	pfam09002_csx1_CAS-III	8.6e-84	276.0	4.5
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	8.1e-72	236.2	0.1
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	csx16	pfam09652_csx16_CAS-I:CAS-III	1.4e-30	100.2	0.1
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	cas10	cd09680_cas10_CAS-III	5e-110	363.6	1.1
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	csx1	pfam09623_csx1_CAS-III	4.1e-80	263.4	0.0
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	cas6	mkCas0066_cas6_CAS-I:CAS-III	5.6e-101	332.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.27977e-76
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.05628e-08
LR134171.1|VEB28311.1|707939_708449_-|peptidyl-prolyl-cis-trans-isomerase-B	gnl|CDD|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	4.43952e-94
LR134171.1|VEB28312.1|708551_709931_+|cysteinyl-tRNA-synthetase	gnl|CDD|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
LR134171.1|VEB28306.1|705003_705999_+|fermentative-D-lactate-dehydrogenase,-NAD-dependent	gnl|CDD|240659	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains. D-Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate, and is a member of the 2-hydroxyacid dehydrogenase family. LDH is homologous to D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH) and shares the 2-domain structure of formate dehydrogenase. D-2-hydroxyisocaproate dehydrogenase-like (HicDH) proteins are NAD-dependent members of the hydroxycarboxylate dehydrogenase family, and share the Rossmann fold typical of many NAD binding proteins. HicDH from Lactobacillus casei forms a monomer and catalyzes the reaction R-CO-COO(-) + NADH + H+ to R-COH-COO(-) + NAD+. D-HicDH, like the structurally distinct L-HicDH, exhibits low side-chain R specificity, accepting a wide range of 2-oxocarboxylic acid side chains. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain.	0
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	gnl|CDD|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.42903e-76
LR134171.1|VEB28304.1|701753_703031_+|threonine-synthase	gnl|CDD|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	gnl|CDD|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.06659e-88
LR134171.1|VEB28305.1|703881_704991_+|cystathionine-gamma-synthase	gnl|CDD|181320	PRK08247, PRK08247, methionine biosynthesis PLP-dependent protein.	0
LR134171.1|VEB28307.1|706118_706442_+|thioredoxin-1	gnl|CDD|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	4.89092e-56
LR134171.1|VEB28313.1|710091_710952_-|acyl-CoA-thioesterase-II	gnl|CDD|224857	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism].	4.30751e-154
LR134171.1|VEB28308.1|706491_706767_-|Uncharacterised-protein	gnl|CDD|239427	cd03311, CIMS_C_terminal_like, CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from both barrels contribute to the binding of the folate substrate.	1.16467e-15
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.60878e-07
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.78048e-13
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	3.26098e-06
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	gnl|CDD|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	2.36153e-41
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	2.53233e-105
LR134171.1|VEB28310.1|707096_707885_-|DNase	gnl|CDD|223162	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair].	1.1111e-98

Protein sequences

>LR134171.1|VEB28313.1|710091_710952_-|acyl-CoA-thioesterase-II
MSDILNNLIHLLKLEKIDDLIFRGESQDLGFRQVFGGQVVAQALSAAMQVALEDRILHSCHAYFLAPGDSHYPIIYDVETLREGRNFSALRVKAIQHKNTICHVTASFQVLEKGFEHQNSMPNVGAPEDFTDENVMLQKVAQTLPEPLNEKFAAERPFEVRTKYLNNPFNGTKLPAEQYSWFKTNGETPLDIKIQQCLLAYFSDFHCILTALHPHEKGFLQKGMKVATIDHSIWFHRPFDLNHWHLHAIESNNAFGGRGLARGQIFSQDGQLIATTQQEGLIRFNE
>LR134171.1|VEB28312.1|708551_709931_+|cysteinyl-tRNA-synthetase
MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDLTYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVATFREAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAGSDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLEDGANGTTWRKQ
>LR134171.1|VEB28311.1|707939_708449_-|peptidyl-prolyl-cis-trans-isomerase-B
MVTLHTNFGDIKIKLDFDKAPVTAENFLNYCKDGFYNNTIFHRVIDGFMIQGGGMESGMREKATKAPIQNEANNRLSNKRGTIAMARTSDPHSATAQFFINVADNDFLNYRSKEMFGREVVQEWGYAVFGEVVEGMDVVDKIKKVKTGNKGFHQDVPTEDVVITLVSVE
>LR134171.1|VEB28310.1|707096_707885_-|DNase
MPFFDTHTHLDYLQQFTGEPLSQLIDNAKQADVQKILVVAVKEADFKTIQNMTALFPDNLCYGLGLHPLYIQEHAENDLILLEQALKNRDANCTAVAEIGLERAIPDLLTDELWAKQCHFFESQLYLAKQFNLPVNIHSRKTHDQIFTFLKRIPLSKLGVVHGFSGSYDQAKRFVDLGYKIGVGGTITYERANKTRQAIAKLPLDALVLETDSPDMPVFGFQGQPNRPERIVESFKALCALRNEPAELIKKVTWENACQIFS
>LR134171.1|VEB28309.1|706825_707035_-|Uncharacterised-protein
MVTSGNYASYYLALLPSENGETIDNWVLPLGTQGLTFEADSWNSLDMRSNVSCFMRMTDMPLDRSWRVA
>LR134171.1|VEB28308.1|706491_706767_-|Uncharacterised-protein
MRGPYTSLVDLFESALPDILMLEFSTPRAGELSSLLESEILRQKCILGLGVINPRSDEVETVTQIVQRAEKALNYLPPEQISKFQTKKLPH
>LR134171.1|VEB28307.1|706118_706442_+|thioredoxin-1
MSEVLHINDADFESVVVNSDIPVLLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI
>LR134171.1|VEB28306.1|705003_705999_+|fermentative-D-lactate-dehydrogenase,-NAD-dependent
MKIAIYSTKSYDRKYIELINAKYNFDLEFFDFMLNESTVRLAEHCEVVCIFVNDNGSRKVLEKLAALGVKIVALRCAGFNNVDLKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLIGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFKNPVVEELGGQYVELDELYAKSHVITLHCPATPENYHLLNREAFAKMKDGVMIVNTSRGSLIDTQAAIDALKQRKIGALGMDVYENERDLFFEDKSNEVIQDDIFRRLSSCHNVLLTGHQAFLTEEALTNIADVTLSNVYKLKSGKVCENIVLPS
>LR134171.1|VEB28305.1|703881_704991_+|cystathionine-gamma-synthase
MTQQYAIDTLLAQAGNRSDEGTGAVSAPIFLSTAYGHCGIGESTGFDYTRTKNPTRTVLEETIAKLENGDRGFAFSSGMAAIQVLMTLFTAPDEWIVSSDVYGGTYRLLDFSYKNNNSVKPVYVNTASASEIEAAINPNTKAIFIETPSNPLMEECDVVEIAKLAKKHNLMLIVDNTFLTPVLSRPLDLGADVVIHSGTKYIAGHNDALVGLIVAKGQALCDRIAYIQNGAGAVLSPFDSWLTIRGMKTLSLRMKRHQENAQAIAEFLKDQPQVESVLYPNKGGMLSFRLQDEAWVNTFLKSIKLITFAESLGGTESFITYPATQTHMDIPETERVARGITNTLLRFSVGIEDVEDIKADLLQAFANLK
>LR134171.1|VEB28304.1|701753_703031_+|threonine-synthase
MNLYNIKHPEEQVTFSQAVRQGLGRDQGLFFPEVIPQLNNIDELLEVPLVERSQKILGALIGEELPKATLDEMVRNAFTFTAPLEKVEDNIYALELFHSPTLAFKDFGGRFMAQALAAVRGDGKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKISPLQEKLFCTLGGNIRTVAINADFDACQALVKQAFDDVELRQAIGLNSANSINISRLLAQVCYYFEAVAQLPKEKRDNVVVSVPSGNFGNLTAGLIAKTLGLPIKRFVASTNANDTVPRYLKSGNWDPKTTVATLSNAMDVSRPNNWPRVEELFKRNGWDLTDLGSGMLSDSETEDTLKAMQSKGYLCEPHGAIAYQVLKDQLKADEVGIFLCTAHPAKFKESVERILGIQLPLPETLDKHNQLPLLSDEMDNDFAQLRAYLLKS
>LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family
MSQKRKILLSVTGMSPAVVTETLYALVTEKGFIPTEIQVITTEQGKNKLLEALLGIEGGRKERKGALQEFIEDYGEKYGFSSIHFDESCIHIIKDKCGQNLPDIRTPEENEQAANSIIQLVGKLCQDEESQLHVSIAGGRKTMGFFMGYALSLYGREQDSLSHVLVDAQYENLPSFYYPKPYSYLINDRDGKEIDAKAGKVMLAEIPWVRLGLGVPEDLKQQSISYSESVKNAQALLDKPSLTFLSPLEDCLVKFGTKVIKLAPRGYTLLLSLALAKKYNWHIGIREEQKTIDTYLKIYRAIKADPKDRMGNRLSGEENDLKKVLSESQTDIRNKMTEYFSLGKGAKSDYIPSSSHKTGNYELNVELDSIDIAELQLDLKHLNLF
>LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)
MQPKYDVHFCLISDQAAPSLLPILDPDFKPKEAVFLVSDKMKSNAEALANVFKEKNVKVTLVRIENIYDFHEMENCFIEQIDQFDGQNIALNVTGGTKLMAIVAQNTFAMGGKPIFYVDSDNNQILFISRDEKGQSIPNKILNCQIDLKTYLSAYGMVYKSVKQPLASERLIANLEPFIKQYDKYKDDIPLLNSYAKESQKSGFKVDFKHHKLKSLVTLLEELHHKDLLDFDHNHIDFRDTVHKDLLNGIWLEEITYKAIENIKSIQDKALSLEVGNSSYDQSKHQYALKNQGNQNELDIAFIAKNRLHIIECKTQLMNKEGGIKSEEILYKLEALKNYGGLMTKKCLVSYFEVPESVKNRAKELHIEIIQGKDLQRLREKIANWIGKA
>LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family
MAVWFVSRHPGAIEWIKTQSIHIDHWATHLDTNQIQPNDVVIGTLPVHLASQVCEKGATFYFLSVNVKPEQRGTELTAQQLVEQGCSLQAFHIQKR
>LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)
MSLNSLPIARYQFTFQVTEPIQLPEYSGSTLRGAFGRALRKIACMTKQTECKGCPLYRTCPYTNIFETPAPTLHELQKFSQVPNGYMIEPPEWGEKVYFSGEKLQFSLVLFGRLIEQLPLIAFAFKRAFEYNVGRGKAHLLDISVFNENAGNFESVLVNGNIIEHHKAVKFPESFSNNAVIEISTPLRLQENGKPLNEKEISVERFFISLAKRISLLSEFHFEPLHFDFELLKNQITQIQDEKNLKWQDWTRYSSRQDQKMKLGGVVGKWQFKNLSPELSQLLYIGQWLHCGKNATFGLGKYRITNL
>LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5
MKKFMHTHKVYLTPLSPIHIGCGEDFEPTNYVIDGTTLFNFEPSQLALNERERTDLLNAVNRLDLLAIQRFFLNQKDKAIASAYYFADVAEGLAQDYKNRVGKVAQRENDGNKVINNLSIERTAYLPIQHLPYIPGSGFKGAVATALLDQAHQNKNNPKVGVKDHGKLLKEYIGEFEKSKLRYVKFSDFTPLHHAETKIYYALNFKKRVSKTGGSKQEIVLRRECITAGQYRTFKSDLTLMEDSFYSISDLQKSLNAFYLPVFRKEMELLQSRNLASTQYLKSIEKLCSLPNVVLIRLGKNGADSKTYQGENIAQIKIMGVTGFKDSSTTIWLAGANQAQQSDLLPLGWALLEFNPTSDNEMLKTWCEAQPKSKFDRSEILVKREAQKIEQARLQAEVEAKRLAEQKAAEEKQALLNSLSDNQRLVIDFVEKVQNTRERQADNTGSILLKEAQALIESAVENWDISERQFIKSQITVELLKSKVDFKKKDTEKNVKKWFNKLVTE
>LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4
MKLYRFTLTPQSAMGTPLVGDTLFGQLCWAVRNRFGEARLTALLEGYTEQRPFMVVSDAFPQGFLPLPTLPSKFWQTKTETDRKSLKKAQWVNIEDAENSEVKFWQECALQANFKFEKESQDQFHNTIDRQTNTTGEGQFAPYSTELTWFGTAQKFDLYIVLDEVRFSLEELQQVLNDVGSFGFGRDASIGLGKFQCTHPQAVNFLQQNANCYLTLANCAPQNLGLNKEYCYYQITTRFGRHGDIQALSSNPFKKPIILAKPAAIFTPEKYEPRLFLGNGLSGISHAQLNAVHQGYAPVFNLFVDFKGKDHK
>LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3
MTKLNNILEIKAKLELQTGLHIGAGDSEMHIGGIDNSVIKHPITQSPYIPGSSLKGIIRTLLEWRSGEVKKAPLSLDDLKEAKNKEEVKNILRLFGIGGDAKNTDDIVKEIGVSRLAFWDCALDAGWEKAIRDDNQLLTEAKSENTIDRITSTAGNPRQTERVPAGAKFNFKLMLRQFEGDKPELLDLVLKGLKLLELDSLGGSGSRGYGKVKFTKLTVDGNARNLDDIKPFE
>LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2
MFNYKDIDLSDDKNLIIFSKIAEDAAKHIYYENDKPTKSNKSTQIRKFYDELCMWENKVNSVNLNSINKEEKDQKRKDSFQQYAPFIYMMKAKVAYSQARKSGGATLVNENFSQVFNQCIEQIKDHKTLRRAKLFMEAVMGFYKLEESKKGKQND
>LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE
MSERTISLAFSVWHHYLKQLTEKHQISLPIFPEQLKKVDISYFLPKAEKIVLGKLPEIHQDNEKLFSLFEHINQEIDKSQFFYDFKPLSPNSIFPTKDVKGTDFSILWQQFVKAVENDIPISHRNNLSLWLDHFDTAMQCFTCNLPSPYSNEISFYDFTKAVAAFAVALADEKADKENPFLLIQGDFFGIQDFIFSGGSESNKGAAKILRGRSFQVSLFTELVALKILNACGLPTTSQMMNAAGKFLIVAPNTEEVKNAIKQVQTELNQWFINETYGLIGLGIAVQPAKSSEFEQANYEKLVKKLFENLEEQKLKRLDLTDTTQSVQKVEYPNGVCKMNSFFPAQSGKEHSIISEDQIKIGEMLAKKQRIIIADINAEINHQYETQILKLPILGFKVIFTNSREDTKEFDYPVKLLQIYRFWDFSLPKDTNAQIWNGYARRYINAYVPFDEKGEIVTFEDIQTKDEGQKALMTLKGDVDNLGTIFQKGIKPANIAKMAALSRQMNQFFSLWLPAYCAENSPNMYTVFAGGDDFFLIGPWHSTQKVAYEMKQAFARYVAENPEIHFSVGMVMSKSNIPVPRLGDLAEEALEKSKGIDKGEKVSTAAGKNAVTIFNRSVKWADWKQLCDLEEEIHRLADTYKISTSYLYSLIRLCEQAEDENNIESTMWRSRFYYRTARYVTDKLPKENRNKALSEMSISLGDKGIGSYKLNFAIPLTNYFYQKR
>LR134171.1|VEB28324.1|723498_723726_+|Uncharacterised-protein
MRKIEQKMLDCIQFGHNFKLGNTKVLWHNGELRVYLHDYCIIHKVKNKITLKKGQILGNGEPFIFKTLFKFDHKV

Crispr_ID: LR134171_2

• CRISPR_ID: LR134171_2
• CRISPR_location: 723203-723454
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1

Consensus repeat of LR134171_2

Consensus_repeat	Method
TAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CRT
TGGTCTCAATCCCTTTGGAACAGGGCAATGTCTTTCGACTA	PILER-CR
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CRISPRCasFinder

spacers of LR134171_2

>2.1|723242|32|LR134171|CRT
CAAATAATCATCATATCTAGCCGACCAATCTA
>2.2|723313|32|LR134171|CRT
ATAAAATCTCCTATGTAAGATAAGCACATTGC
>2.3|723384|30|LR134171|CRT
CATTACGCCCTGTCATACGTTGCATAGTCA
>2.4|723245|30|LR134171|PILER-CR
AATAATCATCATATCTAGCCGACCAATCTA
>2.5|723316|30|LR134171|PILER-CR
AAAATCTCCTATGTAAGATAAGCACATTGC
>2.6|723387|28|LR134171|PILER-CR
TTACGCCCTGTCATACGTTGCATAGTCA
>2.7|723242|34|LR134171|CRISPRCasFinder
CAAATAATCATCATATCTAGCCGACCAATCTATA
>2.8|723313|34|LR134171|CRISPRCasFinder
ATAAAATCTCCTATGTAAGATAAGCACATTGCTA
>2.9|723384|32|LR134171|CRISPRCasFinder
CATTACGCCCTGTCATACGTTGCATAGTCATC

CRISPR arrays and Neighbor proteins around LR134171_2

CRISPR arrays

The CRISPR arrays of LR134171_2

>merge|LR134171|2|723203-723454|CRT,PILER-CR,CRISPRCasFinder
CAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACCAAATAATCATCATATCTAGCCGACCAATCTATAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACATAAAATCTCCTATGTAAGATAAGCACATTGCTAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACCATTACGCCCTGTCATACGTTGCATAGTCATCGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACGA

>LR134171|2|1|723203-723452|CRT
CAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CAAATAATCATCATATCTAGCCGACCAATCTA
TAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	ATAAAATCTCCTATGTAAGATAAGCACATTGC
TAGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CATTACGCCCTGTCATACGTTGCATAGTCA
TCGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC

>LR134171|2|2|723204-723454|PILER-CR
AGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACCAA	ATAATCATCATATCTAGCCGACCAATCTAT
AGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACATA	AAATCTCCTATGTAAGATAAGCACATTGCT
AGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACCAT	TACGCCCTGTCATACGTTGCATAGTCAT
CGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACGA

>LR134171|2|2|723205-723453|CRISPRCasFinder
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CAAATAATCATCATATCTAGCCGACCAATCTATA
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	ATAAAATCTCCTATGTAAGATAAGCACATTGCTA
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CATTACGCCCTGTCATACGTTGCATAGTCATC
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
LR134171.1|VEB28314.1|711076_711181_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28333.1|732279_733170_+|inorganic-polyphosphate/ATP-NAD-kinase	unknown	unknown	gnl|CDD|167337
LR134171.1|VEB28329.1|728388_730512_-|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl|CDD|236436
LR134171.1|VEB28326.1|725216_726701_+|exonuclease-V-subunit-alpha	unknown	unknown	gnl|CDD|350691
LR134171.1|VEB28328.1|727237_728098_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28325.1|724737_725202_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|136097
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	csx1	pfam09002_csx1_CAS-III	gnl|CDD|312526
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	csx1	pfam09623_csx1_CAS-III	gnl|CDD|187872
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
LR134171.1|VEB28327.1|726801_727164_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28330.1|730793_731225_+|Putative-nucleotidyltransferase-protein-component	unknown	unknown	gnl|CDD|131042
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl|CDD|187793
LR134171.1|VEB28324.1|723498_723726_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28331.1|731226_731571_+|nucleotidyltransferase	unknown	unknown	gnl|CDD|143393
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl|CDD|187794
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl|CDD|367635
LR134171.1|VEB28332.1|731583_732180_-|heat-shock-protein	unknown	unknown	gnl|CDD|184539
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl|CDD|370601
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	9.7e-26	85.3	5.4
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	csx1	pfam09002_csx1_CAS-III	8.6e-84	276.0	4.5
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	9e-115	378.0	0.1
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	9.7e-16	53.2	3.3
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	cas6	mkCas0066_cas6_CAS-I:CAS-III	5.6e-101	332.7	0.0
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	csx16	pfam09652_csx16_CAS-I:CAS-III	1.4e-30	100.2	0.1
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	cas10	cd09680_cas10_CAS-III	5e-110	363.6	1.1
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	csx1	pfam09623_csx1_CAS-III	4.1e-80	263.4	0.0
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	8.1e-72	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
LR134171.1|VEB28333.1|732279_733170_+|inorganic-polyphosphate/ATP-NAD-kinase	gnl|CDD|167337	PRK02231, ppnK, NAD(+) kinase.	0
LR134171.1|VEB28329.1|728388_730512_-|anaerobic-ribonucleoside-triphosphate-reductase	gnl|CDD|236436	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
LR134171.1|VEB28326.1|725216_726701_+|exonuclease-V-subunit-alpha	gnl|CDD|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.5694e-21
LR134171.1|VEB28325.1|724737_725202_+|single-stranded-DNA-binding-protein	gnl|CDD|136097	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional.	1.62659e-65
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	gnl|CDD|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.42903e-76
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	gnl|CDD|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.06659e-88
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.27977e-76
LR134171.1|VEB28330.1|730793_731225_+|Putative-nucleotidyltransferase-protein-component	gnl|CDD|131042	TIGR01987, Uncharacterized_protein_HI_0074, nucleotidyltransferase substrate binding protein, HI0074 family. The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins. It forms a complex with HI0073, encoded by the adjacent gene and containing a nucleotidyltransferase nucleotide binding domain (pfam01909).	4.46059e-51
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.05628e-08
LR134171.1|VEB28331.1|731226_731571_+|nucleotidyltransferase	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	6.98951e-13
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.60878e-07
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.78048e-13
LR134171.1|VEB28332.1|731583_732180_-|heat-shock-protein	gnl|CDD|184539	PRK14150, PRK14150, heat shock protein GrpE; Provisional.	1.02642e-97
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	gnl|CDD|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	2.36153e-41
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	2.53233e-105
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	3.26098e-06

Protein sequences

>LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE
MSERTISLAFSVWHHYLKQLTEKHQISLPIFPEQLKKVDISYFLPKAEKIVLGKLPEIHQDNEKLFSLFEHINQEIDKSQFFYDFKPLSPNSIFPTKDVKGTDFSILWQQFVKAVENDIPISHRNNLSLWLDHFDTAMQCFTCNLPSPYSNEISFYDFTKAVAAFAVALADEKADKENPFLLIQGDFFGIQDFIFSGGSESNKGAAKILRGRSFQVSLFTELVALKILNACGLPTTSQMMNAAGKFLIVAPNTEEVKNAIKQVQTELNQWFINETYGLIGLGIAVQPAKSSEFEQANYEKLVKKLFENLEEQKLKRLDLTDTTQSVQKVEYPNGVCKMNSFFPAQSGKEHSIISEDQIKIGEMLAKKQRIIIADINAEINHQYETQILKLPILGFKVIFTNSREDTKEFDYPVKLLQIYRFWDFSLPKDTNAQIWNGYARRYINAYVPFDEKGEIVTFEDIQTKDEGQKALMTLKGDVDNLGTIFQKGIKPANIAKMAALSRQMNQFFSLWLPAYCAENSPNMYTVFAGGDDFFLIGPWHSTQKVAYEMKQAFARYVAENPEIHFSVGMVMSKSNIPVPRLGDLAEEALEKSKGIDKGEKVSTAAGKNAVTIFNRSVKWADWKQLCDLEEEIHRLADTYKISTSYLYSLIRLCEQAEDENNIESTMWRSRFYYRTARYVTDKLPKENRNKALSEMSISLGDKGIGSYKLNFAIPLTNYFYQKR
>LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2
MFNYKDIDLSDDKNLIIFSKIAEDAAKHIYYENDKPTKSNKSTQIRKFYDELCMWENKVNSVNLNSINKEEKDQKRKDSFQQYAPFIYMMKAKVAYSQARKSGGATLVNENFSQVFNQCIEQIKDHKTLRRAKLFMEAVMGFYKLEESKKGKQND
>LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3
MTKLNNILEIKAKLELQTGLHIGAGDSEMHIGGIDNSVIKHPITQSPYIPGSSLKGIIRTLLEWRSGEVKKAPLSLDDLKEAKNKEEVKNILRLFGIGGDAKNTDDIVKEIGVSRLAFWDCALDAGWEKAIRDDNQLLTEAKSENTIDRITSTAGNPRQTERVPAGAKFNFKLMLRQFEGDKPELLDLVLKGLKLLELDSLGGSGSRGYGKVKFTKLTVDGNARNLDDIKPFE
>LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4
MKLYRFTLTPQSAMGTPLVGDTLFGQLCWAVRNRFGEARLTALLEGYTEQRPFMVVSDAFPQGFLPLPTLPSKFWQTKTETDRKSLKKAQWVNIEDAENSEVKFWQECALQANFKFEKESQDQFHNTIDRQTNTTGEGQFAPYSTELTWFGTAQKFDLYIVLDEVRFSLEELQQVLNDVGSFGFGRDASIGLGKFQCTHPQAVNFLQQNANCYLTLANCAPQNLGLNKEYCYYQITTRFGRHGDIQALSSNPFKKPIILAKPAAIFTPEKYEPRLFLGNGLSGISHAQLNAVHQGYAPVFNLFVDFKGKDHK
>LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5
MKKFMHTHKVYLTPLSPIHIGCGEDFEPTNYVIDGTTLFNFEPSQLALNERERTDLLNAVNRLDLLAIQRFFLNQKDKAIASAYYFADVAEGLAQDYKNRVGKVAQRENDGNKVINNLSIERTAYLPIQHLPYIPGSGFKGAVATALLDQAHQNKNNPKVGVKDHGKLLKEYIGEFEKSKLRYVKFSDFTPLHHAETKIYYALNFKKRVSKTGGSKQEIVLRRECITAGQYRTFKSDLTLMEDSFYSISDLQKSLNAFYLPVFRKEMELLQSRNLASTQYLKSIEKLCSLPNVVLIRLGKNGADSKTYQGENIAQIKIMGVTGFKDSSTTIWLAGANQAQQSDLLPLGWALLEFNPTSDNEMLKTWCEAQPKSKFDRSEILVKREAQKIEQARLQAEVEAKRLAEQKAAEEKQALLNSLSDNQRLVIDFVEKVQNTRERQADNTGSILLKEAQALIESAVENWDISERQFIKSQITVELLKSKVDFKKKDTEKNVKKWFNKLVTE
>LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)
MSLNSLPIARYQFTFQVTEPIQLPEYSGSTLRGAFGRALRKIACMTKQTECKGCPLYRTCPYTNIFETPAPTLHELQKFSQVPNGYMIEPPEWGEKVYFSGEKLQFSLVLFGRLIEQLPLIAFAFKRAFEYNVGRGKAHLLDISVFNENAGNFESVLVNGNIIEHHKAVKFPESFSNNAVIEISTPLRLQENGKPLNEKEISVERFFISLAKRISLLSEFHFEPLHFDFELLKNQITQIQDEKNLKWQDWTRYSSRQDQKMKLGGVVGKWQFKNLSPELSQLLYIGQWLHCGKNATFGLGKYRITNL
>LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family
MAVWFVSRHPGAIEWIKTQSIHIDHWATHLDTNQIQPNDVVIGTLPVHLASQVCEKGATFYFLSVNVKPEQRGTELTAQQLVEQGCSLQAFHIQKR
>LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)
MQPKYDVHFCLISDQAAPSLLPILDPDFKPKEAVFLVSDKMKSNAEALANVFKEKNVKVTLVRIENIYDFHEMENCFIEQIDQFDGQNIALNVTGGTKLMAIVAQNTFAMGGKPIFYVDSDNNQILFISRDEKGQSIPNKILNCQIDLKTYLSAYGMVYKSVKQPLASERLIANLEPFIKQYDKYKDDIPLLNSYAKESQKSGFKVDFKHHKLKSLVTLLEELHHKDLLDFDHNHIDFRDTVHKDLLNGIWLEEITYKAIENIKSIQDKALSLEVGNSSYDQSKHQYALKNQGNQNELDIAFIAKNRLHIIECKTQLMNKEGGIKSEEILYKLEALKNYGGLMTKKCLVSYFEVPESVKNRAKELHIEIIQGKDLQRLREKIANWIGKA
>LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family
MSQKRKILLSVTGMSPAVVTETLYALVTEKGFIPTEIQVITTEQGKNKLLEALLGIEGGRKERKGALQEFIEDYGEKYGFSSIHFDESCIHIIKDKCGQNLPDIRTPEENEQAANSIIQLVGKLCQDEESQLHVSIAGGRKTMGFFMGYALSLYGREQDSLSHVLVDAQYENLPSFYYPKPYSYLINDRDGKEIDAKAGKVMLAEIPWVRLGLGVPEDLKQQSISYSESVKNAQALLDKPSLTFLSPLEDCLVKFGTKVIKLAPRGYTLLLSLALAKKYNWHIGIREEQKTIDTYLKIYRAIKADPKDRMGNRLSGEENDLKKVLSESQTDIRNKMTEYFSLGKGAKSDYIPSSSHKTGNYELNVELDSIDIAELQLDLKHLNLF
>LR134171.1|VEB28314.1|711076_711181_+|Uncharacterised-protein
MSFDLNNFVEMEVENGLNPFGTGQCLSTLTLLSQ
>LR134171.1|VEB28324.1|723498_723726_+|Uncharacterised-protein
MRKIEQKMLDCIQFGHNFKLGNTKVLWHNGELRVYLHDYCIIHKVKNKITLKKGQILGNGEPFIFKTLFKFDHKV
>LR134171.1|VEB28325.1|724737_725202_+|single-stranded-DNA-binding-protein
MAGINKVIIIGNLGNAPEIRAMQNGDTVANFSVATSESWVDKNTQEKRENTEWHRIVLYRRLADIAGQYLRKGSKVYVEGKLKTRQWQDEKGQTHYVTEIIGSYLEMLGSKTENNQIDPSIPSVNQEKPTSNYLNKHHSDDPFLDGSDEKDWPF
>LR134171.1|VEB28326.1|725216_726701_+|exonuclease-V-subunit-alpha
MQYPEKKLTIEQRLKEKLKSQQYNNLLNKIQSCSQSQEEALWQMLYILEETPKHVCLQGAAGSGKSYLAGILKDILVALYPNSVYAAASTHQAKRVLSKSLGGFGCMTLHSLLDLKPEEEEDKLHFTPRSKSIAVFELNDDVTTLESNYEEREALFLIIDEVSMVDSQVFTHMKEVIPEHVKIIGIGDPYQLPPVYQEDHKIVEKSRFFTDSAFCQVHLSGVMRQSIGSPIIKQSEEIRLMQRDTLTPEMSSEGVGIIQYHSVKAFADAYLERVHSAKDALDCRILAFTNNKVNEINRYIRQQINKTNEPLIVGEYLILQEPVRDPDDIKKVMISNSEILEVVTIQEKNKNFCFNFSKQNLSVNYAEIEVRILYDDEQKDRLVKLNIIPDEKQYEEFKKALSFEALQLKIAKRQGLLKGQEAGFMWHYWWKDRVFFISTKSIFASTVHKTQGTTLDSSFVYTSDFAAAKNIDLELYYQLLYVAITRAKNQVHFI
>LR134171.1|VEB28327.1|726801_727164_+|Uncharacterised-protein
MLNIQQNTNHYLEDGYSHPYTSSELLAISLGYKEVFHPHSYNQRYFILNGKKWIHNLDALRHKLNREYGRYITDEELEAYEPEGFGYDVTAYFEHCVVPVKAVSKTNDFKELMRRVSLSH
>LR134171.1|VEB28328.1|727237_728098_+|Uncharacterised-protein
MYYLTNHNFCKLLSALYLDLPMNYADAYVNYYSGYRLASFDLDLHFFTKGEARALVIADKLIKDIQFIATAVQIARCNAEQKKWVEKIVLPAFHLHKKCNLLSSDFENFLIPESCPESRREEYRTYFLTHKDRYGYAENKVAPIVFCRLLQAKFNLSEELVDLEMHHFSRTNYDNSEVVEFNHTLDFEKEAINIQEMIDRFSTRVSKCKPSEVRSAYYRQNLEFLSEEERAMITTIQQERKQIYVRILNFYFQKLFKEGADIPLHILELAGFQPCKGCCKHLLAEW
>LR134171.1|VEB28329.1|728388_730512_-|anaerobic-ribonucleoside-triphosphate-reductase
MSNFGVIKRDGSRAEFKIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFIHHQGEIDINQIQKIVEDKLMASRYPEIARAYIEYRHDRDLAREKRSQLTKEIEGLIEQSNVELLNENANKDAKVIPTQRDLLAGIVAKHYAKHHILPRDVVEAHEKGEIHYHDLDYAPFFPMFNCMLVDLEGMLSRGFKMGNAEIEPPKSIGTATAVTAQIIAQVASHIYGGTTINRIDEVLSPYVQISYEKHLKHAQEWNVPDVEGYAKALIEKECFDAFQSLEYEVNTLHTSNGQTPFVTFGFGLGTSWQSRLIQQAILKNRIRGLGKNHKTPVFPKLVFTIKKGLNQTKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKAPMGCRSFLGAYEEKGHEIHDGRNNLGVVSLNLPHIALESKNEEDFYRTLDERLAIAKKALMTRIARLENTKARVAPILYMEGACGVRLKADENVAQIFKNGRASISLGYIGIHETINALYKKGHIFDDEQLREKGIAIVRHLSEAVKRWQKETGYAFSLYSTPSENLCDRFCRLDTKKFGVIEGVTDKGYYTNSYHLDVEKKVNPYDKLDFEMAYPPLASGGFICYGEYPNIQHNLKALEDVWDYSYDRVPYYGTNTPIDECYECGFTGEFECTSKGFVCPKCGNHDSTKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL
>LR134171.1|VEB28330.1|730793_731225_+|Putative-nucleotidyltransferase-protein-component
MMTDKLNLNVFDAAFYSLEQTVVQISDRNWFDMQPSIVQDTLIAGAIQKFEFVYELSLKMMKRQLQQDAINTDDIGAYGFKDILREALRFGLIEDMSKWVAYRDMRNITSHTYDQEKAMAVYAQIDDFLIESRFLLEQLRQRN
>LR134171.1|VEB28331.1|731226_731571_+|nucleotidyltransferase
MTSFAQLDIKSEELAIVKTILQQLVPDYTVWAFGSRVKGKAKKYSDLDLAIISEEPLDFLERDRLKEAFSESDLPWRVDLLDWATTSEDFREVIRKVYVVIQEKEKTVEKPTAL
>LR134171.1|VEB28332.1|731583_732180_-|heat-shock-protein
MSEQEQKVKNPEVENQEEVVVEETQQAEHSQEFDPLEEAIARVQELEEQLKTQIEEAANKEQDILLRSRAEIENLRRRTEQDVEKAHKFALEKFSKDILNTIDNLERALATPANKEDESVKALFDGVELTLKELVSTVGRFGVEAVGVVGEAFNPDLHQAISMQPAEGFETNQISVVLQKGYTLNGRVIRPAMVMVAT
>LR134171.1|VEB28333.1|732279_733170_+|inorganic-polyphosphate/ATP-NAD-kinase
MNHLYRSFKTIALVGKPRNDINLQMHKNLFHWLMERGYQVLVEKEVAITLELPFEHLATLEEIGRRAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRGNLGFLTDIDPKNAYSQLEACLERGEFFVEERFLLEAKIERASEIVSTSNAVNEAVIHPAKIAHMIDFHVYINDKFAFSQRSDGLIVSTPTGSTAYSLSAGGPILTPNLNAIALVPMFPHTLTSRPLVVDGDSKISIRFAEHNTSQLEVGCDSQITLPFTPDDVVHIQKSEHKLRLLHLKNYNYYNVLSSKLGWLKSF

Crispr_ID: LR134171_3

• CRISPR_ID: LR134171_3
• CRISPR_location: 724304-724412
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1

Consensus repeat of LR134171_3

Consensus_repeat	Method
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	CRISPRCasFinder

spacers of LR134171_3

>3.1|724341|35|LR134171|CRISPRCasFinder
AAAACTAGGTTGACAATAATTAATATTGTTACTAT

CRISPR arrays and Neighbor proteins around LR134171_3

CRISPR arrays

The CRISPR arrays of LR134171_3

>merge|LR134171|3|724304-724412|CRISPRCasFinder
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGACAAAACTAGGTTGACAATAATTAATATTGTTACTATGTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC

>LR134171|3|3|724304-724412|CRISPRCasFinder
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	AAAACTAGGTTGACAATAATTAATATTGTTACTAT
GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
LR134171.1|VEB28333.1|732279_733170_+|inorganic-polyphosphate/ATP-NAD-kinase	unknown	unknown	gnl|CDD|167337
LR134171.1|VEB28329.1|728388_730512_-|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl|CDD|236436
LR134171.1|VEB28334.1|733281_734958_+|recombination-and-repair-protein	unknown	unknown	gnl|CDD|273187
LR134171.1|VEB28326.1|725216_726701_+|exonuclease-V-subunit-alpha	unknown	unknown	gnl|CDD|350691
LR134171.1|VEB28328.1|727237_728098_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28325.1|724737_725202_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|136097
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	csx1	pfam09002_csx1_CAS-III	gnl|CDD|312526
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	csx1	pfam09623_csx1_CAS-III	gnl|CDD|187872
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
LR134171.1|VEB28327.1|726801_727164_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28330.1|730793_731225_+|Putative-nucleotidyltransferase-protein-component	unknown	unknown	gnl|CDD|131042
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	gnl|CDD|187793
LR134171.1|VEB28324.1|723498_723726_+|Uncharacterised-protein	unknown	unknown	unknown
LR134171.1|VEB28331.1|731226_731571_+|nucleotidyltransferase	unknown	unknown	gnl|CDD|143393
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl|CDD|187794
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl|CDD|367635
LR134171.1|VEB28332.1|731583_732180_-|heat-shock-protein	unknown	unknown	gnl|CDD|184539
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl|CDD|370601
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	9.7e-26	85.3	5.4
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	csx1	pfam09002_csx1_CAS-III	8.6e-84	276.0	4.5
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	9e-115	378.0	0.1
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	9.7e-16	53.2	3.3
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	cas6	mkCas0066_cas6_CAS-I:CAS-III	5.6e-101	332.7	0.0
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	csx16	pfam09652_csx16_CAS-I:CAS-III	1.4e-30	100.2	0.1
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	cas10	cd09680_cas10_CAS-III	5e-110	363.6	1.1
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	csx1	pfam09623_csx1_CAS-III	4.1e-80	263.4	0.0
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	8.1e-72	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
LR134171.1|VEB28333.1|732279_733170_+|inorganic-polyphosphate/ATP-NAD-kinase	gnl|CDD|167337	PRK02231, ppnK, NAD(+) kinase.	0
LR134171.1|VEB28329.1|728388_730512_-|anaerobic-ribonucleoside-triphosphate-reductase	gnl|CDD|236436	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
LR134171.1|VEB28334.1|733281_734958_+|recombination-and-repair-protein	gnl|CDD|273187	TIGR00634, DNA_repair_protein_RecN, DNA repair protein RecN. All proteins in this family for which functions are known are ATP binding proteins involved in the initiation of recombination and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134171.1|VEB28326.1|725216_726701_+|exonuclease-V-subunit-alpha	gnl|CDD|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.5694e-21
LR134171.1|VEB28325.1|724737_725202_+|single-stranded-DNA-binding-protein	gnl|CDD|136097	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional.	1.62659e-65
LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)	gnl|CDD|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.42903e-76
LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family	gnl|CDD|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.06659e-88
LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.27977e-76
LR134171.1|VEB28330.1|730793_731225_+|Putative-nucleotidyltransferase-protein-component	gnl|CDD|131042	TIGR01987, Uncharacterized_protein_HI_0074, nucleotidyltransferase substrate binding protein, HI0074 family. The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins. It forms a complex with HI0073, encoded by the adjacent gene and containing a nucleotidyltransferase nucleotide binding domain (pfam01909).	4.46059e-51
LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.05628e-08
LR134171.1|VEB28331.1|731226_731571_+|nucleotidyltransferase	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	6.98951e-13
LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	7.60878e-07
LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.78048e-13
LR134171.1|VEB28332.1|731583_732180_-|heat-shock-protein	gnl|CDD|184539	PRK14150, PRK14150, heat shock protein GrpE; Provisional.	1.02642e-97
LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family	gnl|CDD|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	2.36153e-41
LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	2.53233e-105
LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	3.26098e-06

Protein sequences

>LR134171.1|VEB28324.1|723498_723726_+|Uncharacterised-protein
MRKIEQKMLDCIQFGHNFKLGNTKVLWHNGELRVYLHDYCIIHKVKNKITLKKGQILGNGEPFIFKTLFKFDHKV
>LR134171.1|VEB28323.1|719604_721776_-|CRISPR-associated-protein-Cas10/Csm1,-subtype-III-A/MTUBE
MSERTISLAFSVWHHYLKQLTEKHQISLPIFPEQLKKVDISYFLPKAEKIVLGKLPEIHQDNEKLFSLFEHINQEIDKSQFFYDFKPLSPNSIFPTKDVKGTDFSILWQQFVKAVENDIPISHRNNLSLWLDHFDTAMQCFTCNLPSPYSNEISFYDFTKAVAAFAVALADEKADKENPFLLIQGDFFGIQDFIFSGGSESNKGAAKILRGRSFQVSLFTELVALKILNACGLPTTSQMMNAAGKFLIVAPNTEEVKNAIKQVQTELNQWFINETYGLIGLGIAVQPAKSSEFEQANYEKLVKKLFENLEEQKLKRLDLTDTTQSVQKVEYPNGVCKMNSFFPAQSGKEHSIISEDQIKIGEMLAKKQRIIIADINAEINHQYETQILKLPILGFKVIFTNSREDTKEFDYPVKLLQIYRFWDFSLPKDTNAQIWNGYARRYINAYVPFDEKGEIVTFEDIQTKDEGQKALMTLKGDVDNLGTIFQKGIKPANIAKMAALSRQMNQFFSLWLPAYCAENSPNMYTVFAGGDDFFLIGPWHSTQKVAYEMKQAFARYVAENPEIHFSVGMVMSKSNIPVPRLGDLAEEALEKSKGIDKGEKVSTAAGKNAVTIFNRSVKWADWKQLCDLEEEIHRLADTYKISTSYLYSLIRLCEQAEDENNIESTMWRSRFYYRTARYVTDKLPKENRNKALSEMSISLGDKGIGSYKLNFAIPLTNYFYQKR
>LR134171.1|VEB28322.1|719127_719595_-|CRISPR-type-III-A/MTUBE-associated-protein-Csm2
MFNYKDIDLSDDKNLIIFSKIAEDAAKHIYYENDKPTKSNKSTQIRKFYDELCMWENKVNSVNLNSINKEEKDQKRKDSFQQYAPFIYMMKAKVAYSQARKSGGATLVNENFSQVFNQCIEQIKDHKTLRRAKLFMEAVMGFYKLEESKKGKQND
>LR134171.1|VEB28321.1|718433_719135_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm3
MTKLNNILEIKAKLELQTGLHIGAGDSEMHIGGIDNSVIKHPITQSPYIPGSSLKGIIRTLLEWRSGEVKKAPLSLDDLKEAKNKEEVKNILRLFGIGGDAKNTDDIVKEIGVSRLAFWDCALDAGWEKAIRDDNQLLTEAKSENTIDRITSTAGNPRQTERVPAGAKFNFKLMLRQFEGDKPELLDLVLKGLKLLELDSLGGSGSRGYGKVKFTKLTVDGNARNLDDIKPFE
>LR134171.1|VEB28320.1|717485_718424_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm4
MKLYRFTLTPQSAMGTPLVGDTLFGQLCWAVRNRFGEARLTALLEGYTEQRPFMVVSDAFPQGFLPLPTLPSKFWQTKTETDRKSLKKAQWVNIEDAENSEVKFWQECALQANFKFEKESQDQFHNTIDRQTNTTGEGQFAPYSTELTWFGTAQKFDLYIVLDEVRFSLEELQQVLNDVGSFGFGRDASIGLGKFQCTHPQAVNFLQQNANCYLTLANCAPQNLGLNKEYCYYQITTRFGRHGDIQALSSNPFKKPIILAKPAAIFTPEKYEPRLFLGNGLSGISHAQLNAVHQGYAPVFNLFVDFKGKDHK
>LR134171.1|VEB28319.1|715971_717489_-|CRISPR-type-III-A/MTUBE-associated-RAMP-protein-Csm5
MKKFMHTHKVYLTPLSPIHIGCGEDFEPTNYVIDGTTLFNFEPSQLALNERERTDLLNAVNRLDLLAIQRFFLNQKDKAIASAYYFADVAEGLAQDYKNRVGKVAQRENDGNKVINNLSIERTAYLPIQHLPYIPGSGFKGAVATALLDQAHQNKNNPKVGVKDHGKLLKEYIGEFEKSKLRYVKFSDFTPLHHAETKIYYALNFKKRVSKTGGSKQEIVLRRECITAGQYRTFKSDLTLMEDSFYSISDLQKSLNAFYLPVFRKEMELLQSRNLASTQYLKSIEKLCSLPNVVLIRLGKNGADSKTYQGENIAQIKIMGVTGFKDSSTTIWLAGANQAQQSDLLPLGWALLEFNPTSDNEMLKTWCEAQPKSKFDRSEILVKREAQKIEQARLQAEVEAKRLAEQKAAEEKQALLNSLSDNQRLVIDFVEKVQNTRERQADNTGSILLKEAQALIESAVENWDISERQFIKSQITVELLKSKVDFKKKDTEKNVKKWFNKLVTE
>LR134171.1|VEB28318.1|715051_715975_-|Uncharacterized-conserved-protein-(DUF2276)
MSLNSLPIARYQFTFQVTEPIQLPEYSGSTLRGAFGRALRKIACMTKQTECKGCPLYRTCPYTNIFETPAPTLHELQKFSQVPNGYMIEPPEWGEKVYFSGEKLQFSLVLFGRLIEQLPLIAFAFKRAFEYNVGRGKAHLLDISVFNENAGNFESVLVNGNIIEHHKAVKFPESFSNNAVIEISTPLRLQENGKPLNEKEISVERFFISLAKRISLLSEFHFEPLHFDFELLKNQITQIQDEKNLKWQDWTRYSSRQDQKMKLGGVVGKWQFKNLSPELSQLLYIGQWLHCGKNATFGLGKYRITNL
>LR134171.1|VEB28317.1|714697_714988_-|putative-CRISPR-associated-protein,-VVA1548-family
MAVWFVSRHPGAIEWIKTQSIHIDHWATHLDTNQIQPNDVVIGTLPVHLASQVCEKGATFYFLSVNVKPEQRGTELTAQQLVEQGCSLQAFHIQKR
>LR134171.1|VEB28316.1|713518_714688_-|Domain-of-uncharacterised-function-(DUF1887)
MQPKYDVHFCLISDQAAPSLLPILDPDFKPKEAVFLVSDKMKSNAEALANVFKEKNVKVTLVRIENIYDFHEMENCFIEQIDQFDGQNIALNVTGGTKLMAIVAQNTFAMGGKPIFYVDSDNNQILFISRDEKGQSIPNKILNCQIDLKTYLSAYGMVYKSVKQPLASERLIANLEPFIKQYDKYKDDIPLLNSYAKESQKSGFKVDFKHHKLKSLVTLLEELHHKDLLDFDHNHIDFRDTVHKDLLNGIWLEEITYKAIENIKSIQDKALSLEVGNSSYDQSKHQYALKNQGNQNELDIAFIAKNRLHIIECKTQLMNKEGGIKSEEILYKLEALKNYGGLMTKKCLVSYFEVPESVKNRAKELHIEIIQGKDLQRLREKIANWIGKA
>LR134171.1|VEB28315.1|712361_713519_-|CRISPR-associated-protein,-NE0113-family
MSQKRKILLSVTGMSPAVVTETLYALVTEKGFIPTEIQVITTEQGKNKLLEALLGIEGGRKERKGALQEFIEDYGEKYGFSSIHFDESCIHIIKDKCGQNLPDIRTPEENEQAANSIIQLVGKLCQDEESQLHVSIAGGRKTMGFFMGYALSLYGREQDSLSHVLVDAQYENLPSFYYPKPYSYLINDRDGKEIDAKAGKVMLAEIPWVRLGLGVPEDLKQQSISYSESVKNAQALLDKPSLTFLSPLEDCLVKFGTKVIKLAPRGYTLLLSLALAKKYNWHIGIREEQKTIDTYLKIYRAIKADPKDRMGNRLSGEENDLKKVLSESQTDIRNKMTEYFSLGKGAKSDYIPSSSHKTGNYELNVELDSIDIAELQLDLKHLNLF
>LR134171.1|VEB28325.1|724737_725202_+|single-stranded-DNA-binding-protein
MAGINKVIIIGNLGNAPEIRAMQNGDTVANFSVATSESWVDKNTQEKRENTEWHRIVLYRRLADIAGQYLRKGSKVYVEGKLKTRQWQDEKGQTHYVTEIIGSYLEMLGSKTENNQIDPSIPSVNQEKPTSNYLNKHHSDDPFLDGSDEKDWPF
>LR134171.1|VEB28326.1|725216_726701_+|exonuclease-V-subunit-alpha
MQYPEKKLTIEQRLKEKLKSQQYNNLLNKIQSCSQSQEEALWQMLYILEETPKHVCLQGAAGSGKSYLAGILKDILVALYPNSVYAAASTHQAKRVLSKSLGGFGCMTLHSLLDLKPEEEEDKLHFTPRSKSIAVFELNDDVTTLESNYEEREALFLIIDEVSMVDSQVFTHMKEVIPEHVKIIGIGDPYQLPPVYQEDHKIVEKSRFFTDSAFCQVHLSGVMRQSIGSPIIKQSEEIRLMQRDTLTPEMSSEGVGIIQYHSVKAFADAYLERVHSAKDALDCRILAFTNNKVNEINRYIRQQINKTNEPLIVGEYLILQEPVRDPDDIKKVMISNSEILEVVTIQEKNKNFCFNFSKQNLSVNYAEIEVRILYDDEQKDRLVKLNIIPDEKQYEEFKKALSFEALQLKIAKRQGLLKGQEAGFMWHYWWKDRVFFISTKSIFASTVHKTQGTTLDSSFVYTSDFAAAKNIDLELYYQLLYVAITRAKNQVHFI
>LR134171.1|VEB28327.1|726801_727164_+|Uncharacterised-protein
MLNIQQNTNHYLEDGYSHPYTSSELLAISLGYKEVFHPHSYNQRYFILNGKKWIHNLDALRHKLNREYGRYITDEELEAYEPEGFGYDVTAYFEHCVVPVKAVSKTNDFKELMRRVSLSH
>LR134171.1|VEB28328.1|727237_728098_+|Uncharacterised-protein
MYYLTNHNFCKLLSALYLDLPMNYADAYVNYYSGYRLASFDLDLHFFTKGEARALVIADKLIKDIQFIATAVQIARCNAEQKKWVEKIVLPAFHLHKKCNLLSSDFENFLIPESCPESRREEYRTYFLTHKDRYGYAENKVAPIVFCRLLQAKFNLSEELVDLEMHHFSRTNYDNSEVVEFNHTLDFEKEAINIQEMIDRFSTRVSKCKPSEVRSAYYRQNLEFLSEEERAMITTIQQERKQIYVRILNFYFQKLFKEGADIPLHILELAGFQPCKGCCKHLLAEW
>LR134171.1|VEB28329.1|728388_730512_-|anaerobic-ribonucleoside-triphosphate-reductase
MSNFGVIKRDGSRAEFKIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFIHHQGEIDINQIQKIVEDKLMASRYPEIARAYIEYRHDRDLAREKRSQLTKEIEGLIEQSNVELLNENANKDAKVIPTQRDLLAGIVAKHYAKHHILPRDVVEAHEKGEIHYHDLDYAPFFPMFNCMLVDLEGMLSRGFKMGNAEIEPPKSIGTATAVTAQIIAQVASHIYGGTTINRIDEVLSPYVQISYEKHLKHAQEWNVPDVEGYAKALIEKECFDAFQSLEYEVNTLHTSNGQTPFVTFGFGLGTSWQSRLIQQAILKNRIRGLGKNHKTPVFPKLVFTIKKGLNQTKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKAPMGCRSFLGAYEEKGHEIHDGRNNLGVVSLNLPHIALESKNEEDFYRTLDERLAIAKKALMTRIARLENTKARVAPILYMEGACGVRLKADENVAQIFKNGRASISLGYIGIHETINALYKKGHIFDDEQLREKGIAIVRHLSEAVKRWQKETGYAFSLYSTPSENLCDRFCRLDTKKFGVIEGVTDKGYYTNSYHLDVEKKVNPYDKLDFEMAYPPLASGGFICYGEYPNIQHNLKALEDVWDYSYDRVPYYGTNTPIDECYECGFTGEFECTSKGFVCPKCGNHDSTKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL
>LR134171.1|VEB28330.1|730793_731225_+|Putative-nucleotidyltransferase-protein-component
MMTDKLNLNVFDAAFYSLEQTVVQISDRNWFDMQPSIVQDTLIAGAIQKFEFVYELSLKMMKRQLQQDAINTDDIGAYGFKDILREALRFGLIEDMSKWVAYRDMRNITSHTYDQEKAMAVYAQIDDFLIESRFLLEQLRQRN
>LR134171.1|VEB28331.1|731226_731571_+|nucleotidyltransferase
MTSFAQLDIKSEELAIVKTILQQLVPDYTVWAFGSRVKGKAKKYSDLDLAIISEEPLDFLERDRLKEAFSESDLPWRVDLLDWATTSEDFREVIRKVYVVIQEKEKTVEKPTAL
>LR134171.1|VEB28332.1|731583_732180_-|heat-shock-protein
MSEQEQKVKNPEVENQEEVVVEETQQAEHSQEFDPLEEAIARVQELEEQLKTQIEEAANKEQDILLRSRAEIENLRRRTEQDVEKAHKFALEKFSKDILNTIDNLERALATPANKEDESVKALFDGVELTLKELVSTVGRFGVEAVGVVGEAFNPDLHQAISMQPAEGFETNQISVVLQKGYTLNGRVIRPAMVMVAT
>LR134171.1|VEB28333.1|732279_733170_+|inorganic-polyphosphate/ATP-NAD-kinase
MNHLYRSFKTIALVGKPRNDINLQMHKNLFHWLMERGYQVLVEKEVAITLELPFEHLATLEEIGRRAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRGNLGFLTDIDPKNAYSQLEACLERGEFFVEERFLLEAKIERASEIVSTSNAVNEAVIHPAKIAHMIDFHVYINDKFAFSQRSDGLIVSTPTGSTAYSLSAGGPILTPNLNAIALVPMFPHTLTSRPLVVDGDSKISIRFAEHNTSQLEVGCDSQITLPFTPDDVVHIQKSEHKLRLLHLKNYNYYNVLSSKLGWLKSF
>LR134171.1|VEB28334.1|733281_734958_+|recombination-and-repair-protein
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICATFQLESQNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSENDTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQALQLARKHQVKPEDLVEHHKKLKAELTALLDFSESEEMLIEQEKLAFEQMQAMASALTASRQQSATRLAQNVTQSIKQLAMENAEFYVELNTDLDKVSANGADNVIFTLRSNLGQQPQPLAKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLLRQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGSEITELALANAQEMLDLVH

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134171_1	1.1|711089|34|LR134171|CRISPRCasFinder	711089-711122	34	NC_003315	Haemophilus phage HP2, complete genome	27814-27847	1	0.971
LR134171_1	1.1|711089|34|LR134171|CRISPRCasFinder	711089-711122	34	AY027935	Haemophilus influenzae phage HP2, complete genome	27814-27847	1	0.971
LR134171_1	1.1|711089|34|LR134171|CRISPRCasFinder	711089-711122	34	U24159	Bacteriophage HP1 strain HP1c1, complete genome	28667-28700	1	0.971
LR134171_1	1.1|711089|34|LR134171|CRISPRCasFinder	711089-711122	34	NC_001697	Haemophilus phage HP1, complete genome	28667-28700	1	0.971
LR134171_1	1.3|711094|34|LR134171|PILER-CR	711094-711127	34	NC_003315	Haemophilus phage HP2, complete genome	27814-27847	1	0.971
LR134171_1	1.3|711094|34|LR134171|PILER-CR	711094-711127	34	AY027935	Haemophilus influenzae phage HP2, complete genome	27814-27847	1	0.971
LR134171_1	1.3|711094|34|LR134171|PILER-CR	711094-711127	34	U24159	Bacteriophage HP1 strain HP1c1, complete genome	28667-28700	1	0.971
LR134171_1	1.3|711094|34|LR134171|PILER-CR	711094-711127	34	NC_001697	Haemophilus phage HP1, complete genome	28667-28700	1	0.971
LR134171_1	1.1|711089|34|LR134171|CRISPRCasFinder	711089-711122	34	NC_003042	Clostridium perfringens str. 13 plasmid pCP13, complete sequence	3677-3710	6	0.824
LR134171_1	1.3|711094|34|LR134171|PILER-CR	711094-711127	34	NC_003042	Clostridium perfringens str. 13 plasmid pCP13, complete sequence	3677-3710	6	0.824
LR134171_2	2.2|723313|32|LR134171|CRT	723313-723344	32	HQ317391	Cyanophage S-SSM6a genomic sequence	109801-109832	7	0.781
LR134171_2	2.2|723313|32|LR134171|CRT	723313-723344	32	GU071098	Synechococcus phage S-SSM7, complete genome	221651-221682	7	0.781
LR134171_2	2.5|723316|30|LR134171|PILER-CR	723316-723345	30	HQ317391	Cyanophage S-SSM6a genomic sequence	109803-109832	7	0.767
LR134171_2	2.5|723316|30|LR134171|PILER-CR	723316-723345	30	GU071098	Synechococcus phage S-SSM7, complete genome	221653-221682	7	0.767
LR134171_2	2.8|723313|34|LR134171|CRISPRCasFinder	723313-723346	34	HQ317391	Cyanophage S-SSM6a genomic sequence	109801-109834	7	0.794
LR134171_2	2.8|723313|34|LR134171|CRISPRCasFinder	723313-723346	34	GU071098	Synechococcus phage S-SSM7, complete genome	221651-221684	7	0.794

1. spacer 1.1|711089|34|LR134171|CRISPRCasFinder matches to NC_003315 (Haemophilus phage HP2, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

2. spacer 1.1|711089|34|LR134171|CRISPRCasFinder matches to AY027935 (Haemophilus influenzae phage HP2, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

3. spacer 1.1|711089|34|LR134171|CRISPRCasFinder matches to U24159 (Bacteriophage HP1 strain HP1c1, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

4. spacer 1.1|711089|34|LR134171|CRISPRCasFinder matches to NC_001697 (Haemophilus phage HP1, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

5. spacer 1.3|711094|34|LR134171|PILER-CR matches to NC_003315 (Haemophilus phage HP2, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

6. spacer 1.3|711094|34|LR134171|PILER-CR matches to AY027935 (Haemophilus influenzae phage HP2, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

7. spacer 1.3|711094|34|LR134171|PILER-CR matches to U24159 (Bacteriophage HP1 strain HP1c1, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

8. spacer 1.3|711094|34|LR134171|PILER-CR matches to NC_001697 (Haemophilus phage HP1, complete genome) position: , mismatch: 1, identity: 0.971

ttaaataattttgtggaaatggaagtagaaaacg	CRISPR spacer
ttaaatgattttgtggaaatggaagtagaaaacg	Protospacer
******.***************************

9. spacer 1.1|711089|34|LR134171|CRISPRCasFinder matches to NC_003042 (Clostridium perfringens str. 13 plasmid pCP13, complete sequence) position: , mismatch: 6, identity: 0.824

ttaaataattttgtggaaatggaagtagaaaacg-	CRISPR spacer
ttaaataattttgtgtaaattgaa-taaacaactt	Protospacer
*************** **** *** **.* ***  

10. spacer 1.3|711094|34|LR134171|PILER-CR matches to NC_003042 (Clostridium perfringens str. 13 plasmid pCP13, complete sequence) position: , mismatch: 6, identity: 0.824

ttaaataattttgtggaaatggaagtagaaaacg-	CRISPR spacer
ttaaataattttgtgtaaattgaa-taaacaactt	Protospacer
*************** **** *** **.* ***  

11. spacer 2.2|723313|32|LR134171|CRT matches to HQ317391 (Cyanophage S-SSM6a genomic sequence) position: , mismatch: 7, identity: 0.781

----ataaaatctcctatgtaagataagcacattgc	CRISPR spacer
tctgatga----tcctatgaaagataaggacattgc	Protospacer
    **.*    ******* ******** *******

12. spacer 2.2|723313|32|LR134171|CRT matches to GU071098 (Synechococcus phage S-SSM7, complete genome) position: , mismatch: 7, identity: 0.781

----ataaaatctcctatgtaagataagcacattgc	CRISPR spacer
tctgatga----tcctatgaaagataaggacattgc	Protospacer
    **.*    ******* ******** *******

13. spacer 2.5|723316|30|LR134171|PILER-CR matches to HQ317391 (Cyanophage S-SSM6a genomic sequence) position: , mismatch: 7, identity: 0.767

aaaatctcctatgtaagataagcacattgc	CRISPR spacer
tgatgatcctatgaaagataaggacattgc	Protospacer
 .*   ******* ******** *******

14. spacer 2.5|723316|30|LR134171|PILER-CR matches to GU071098 (Synechococcus phage S-SSM7, complete genome) position: , mismatch: 7, identity: 0.767

aaaatctcctatgtaagataagcacattgc	CRISPR spacer
tgatgatcctatgaaagataaggacattgc	Protospacer
 .*   ******* ******** *******

15. spacer 2.8|723313|34|LR134171|CRISPRCasFinder matches to HQ317391 (Cyanophage S-SSM6a genomic sequence) position: , mismatch: 7, identity: 0.794

----ataaaatctcctatgtaagataagcacattgcta	CRISPR spacer
tctgatga----tcctatgaaagataaggacattgcta	Protospacer
    **.*    ******* ******** *********

16. spacer 2.8|723313|34|LR134171|CRISPRCasFinder matches to GU071098 (Synechococcus phage S-SSM7, complete genome) position: , mismatch: 7, identity: 0.794

----ataaaatctcctatgtaagataagcacattgcta	CRISPR spacer
tctgatga----tcctatgaaagataaggacattgcta	Protospacer
    **.*    ******* ******** *********

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	400594 : 404089	6	uncultured_virus(100.0%)	NA	NA
DBSCAN-SWA_2	1101241 : 1111066	20	Haemophilus_phage(25.0%)	terminase,holin,tail	NA
DBSCAN-SWA_3	1174888 : 1181520	10	Escherichia_phage(16.67%)	NA	NA
DBSCAN-SWA_4	1344603 : 1353115	8	uncultured_Caudovirales_phage(16.67%)	NA	NA
DBSCAN-SWA_5	1484852 : 1497149	12	Escherichia_phage(71.43%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>LR134171|400594:404089|DBSCAN-SWA
AATGAAAACTATCACATTAACCATAAAAGGCATACATTGCGGCTGTTGCGTAAAAAGTCTTACTCAAGTTTTAACTGAATTAGATGGTGTACAATCTGCTGATGTGCAATTAGAGGGTAAAGCAAATATTACTTTTGATGAAAATCGAATCAATGTTGCACAGCTGATTGAGGTCATTGAAGATGCTGGATTTGACGCCACAGAGTAAAAAAATTTCAATTCAGATTGGTGGGATGGCCTGCCAATCGCATTCATCAATAAAACAACTAACAAGGAGTAAAAATGAAAACTATCACATTAAACATAAAAGGCATACATTGCGGCTGTTGCGTAAAAAGTCTTACTCAAGTTTTAACTGAATTAGATGGTGTACAATCTGCTGATGTGCAATTAGAGGGTAAAGTAAATATTACTTTTGATGAAAATCGAGTCAATGTTGCACAGCTGATTGAGGTCATTGAAGATGCTGGATTTGACGCCACAGAGTAAAAAATTTCAATTCAGATTGGTGGGATGGCCTGCCAATCGCATTCATCAATAAAACAACTAACAAGGAGTAAAAATGAAAACTATCACATTAAACATAAAAGGCATACATTGCGGCTGTTGCGTAAAAAGTCTTACTCAAGTTTTAACTGAATTAGATGGTGTACAATCTGCTGATGTGCAATTAGAGGGTAAATCAAATATTACTTTTGATGAAAATCGAGTCAATATTGCACAGTTGATTGAGGTCATTGAAGATGCTGGATTTGACGCCACAGAGTAAAAAAATTTCGATTCAGATTGGTGGGATGACCTGCCAATCTTGTGCCAATCACATTCACCAATAAAACAACTAACAAGGAGTAAAAATGAAAACTATCACATTAAACATAAAAGGCATACATTGCGGCTGTTGCGTAAAAAGTCTTACTCAAGTTTTAACTGAATTAGATGGTGTACAATCTGCTGATGTGCAATTAGAGGGTAAAGTAAATATTACTTTTGATGAAAATCGAGTCAATGTTGCACAGCTGATTGAGGTCATTGAAGATGCTGGATTTGACGCCACAGAGTAAAAAAATTTCAATTCAGATTGGTGGGATGACCTGCCAATCTTGTGCCAATCGCATTCATCAATAAAACAACTAACAAGGAGTAAAAATGAAAACTATCACATTAAACATAAAAGGCATACATTGCGGCTGTTGCGTAAAAAGTCTTACTCAAGTTTTAACTGAATTAGATGGTGTACAATCTGCTGATGTGCAATTAGAGGGTAAAGCAAATATTACTTTTGATGAAAATCGAGTCAATGTTGCACAGTTGATTGAGGTCATTGAAGATGCTGGATTTGACGCCACAGAGTAAAAAAATTTCAATTCAGATTGGTGGGATGACCTGCCAATCTTGTGCCAATCGCATTGAAAAAGTTTTAAATAAAAAACCATTTGTGCAACAAGCGGGAGTGAATTTTGCCGTCGAAGAAGCACAAGTTGTATTTGACGCTACGCAAGCAAGCGAAACTCAAATTATAGAGATTATCCATAAAACAGGTTTTTCTGCTCATATCAAACAAGCCAATGAATTACCAATAGAAGAAAATACATCAATCCCTTGGCGATTAATCATACTTTGGATAATCAATATTCCATTTCTGATTGGAATGCTTGGTATGATAGGTGGCTCCCATCACTTAATGTTACCGCCGATTTGGCAATTTGCATTAGCAAGCATTGTGCAACTTTGGTTAGCCATTCCATTTTATCGCGGAGCAATCGGTAGTATTCGTGGTGGACTTGCCAATATGGATGTACTGGTCAGCACAGGAACGCTCACTATTTATCTTTATTCTGCTTTTATGCTGTTTTACCACGCCGATCATGCAATGGGGCATGTGTATTTTGAAGCTTCTGTAATGGTAATTGGTTTTGTCAGTCTTGGAAAATTTCTTGAAGATCGCACTAAAAAGCACAGCCTAAATAGTTTGAGTATGCTCTTGCAGCTGACACCGAAAAAAGTCACTGTTTTACGTAATGAAAAATGGACTGAAATTGCTCTTGACCAAGTCAATATCGGCGAAATCATTCGTGCGAATCAAGGCGAACGTATTGCGGCAGACGGCATAATTGAAAGTGGAAATGGATGGTGTGATGAAAGCCATTTAACGGGCGAGTCTCGTCCAGAAGAAAAACAGAAAGGTGGAAAAGTATTAGCGGGGGCGATGGTAACAGAAGGTTCTATTATCTATCGAGCAAATCAGCTTGGTAGCCAAACCTTACTTGGCGATATGATGAATGCATTATCAGATGCGCAAGGCTCAAAAGCACCTATTGCACGATTTTCTGACAAAGTTGCGTCAGTGTTTGTACCAGCAGTATTAGTCATTTCACTTGTTACTTTCACTCTCACTTACATTCTGACGAATGATAGTGTGTCTTCACTCATTCACGCGGTATCCGTGCTTGTGATTGCTTGCCCTTGTGCCTTGGGATTAGCCACACCAGCTGCCATAATGGTTGGTTTAGGTAAAGCGGTTAATGCTGGCGTATGGTTTAAAGATGCAGCAGCAATGGAGGAAACCGCCCACGTAGATACCGTTGTACTTGATAAAACTGGCACACTAACAAAGGGAGAGCTTGAAATTTCAGCACTATGGCAGCCACAAAGTGCGGTGTATTCTGAAGAGGATTTGTATCGTTTTGCCGCAGCAGTTGAACGACAAGCTAACCACCCAATTGCAAAAGCCATTGTGCAAGCAGCGGAACAAAAAATGTTAGACATTCCCACCGCACTTTTTTCAAAGATGGAAGTGGGTCAAGGTATTCAAGCTGAATTAGAACAAGTGGGAACAATAAAAGTCGGTAAACCCGATTATTGCGGTTTAATCTTGCCTAAAAATTTAGAGGATATCTGGCAAATTGCGAGCATTGTCGCAGTATCTATAAATGATAAACCCATTGGTGCATTTGCGCTGACGGATACCTTAAAAAACGATAGCTTGCACGCTATTCAACGCTTACAACGGCAAAATATTGATGTAGTGATTATGAGTGGCGATCAACAATCTGTGGTAGATTACATAGCGAAACAGCTCGGCATTAACAAAGCCTTTGGTGGACTCAGCCCTAGAGATAAGGCGGAACAAATCCAAAAGCTGAAAGCTCAAGGTCATATTGTCGCAATGGTAGGCGATGGAATAAATGATGCACCTGCTTTAGCCGCGGCAAACGTCAGTTTTGCGATGAAATCAGGTTCAGATATTGCAGAACAAACTGCCTCTGCAACGCTTATGCAACATTCGGTGAATCAACTTGTGGATGCGCTTTTTATTGCAATAGCAACCTTGAAAAATATCAAACAAAATCTATTTTTTGCTTTGATTTACAATATTCTCGGCATACCCCTTGCAGCTTTCGGTTTTCTTAGCCCTATAATCGCTGGTGCTGCTATGGCGTTGAGCTCAATTTCCGTATTGATGAACGCCTTAAGATTGAAAAAAGTGCGGTTCTAA

Protein sequences of DBSCAN-SWA_1

>LR134171|400594:404089|400594_400801_+|VEB28033.1|DBSCAN-SWA
MKTITLTIKGIHCGCCVKSLTQVLTELDGVQSADVQLEGKANITFDENRINVAQLIEVIEDAGFDATE
>LR134171|400594:404089|401920_404089_+|VEB28038.1|DBSCAN-SWA
MLDLTPQSKKISIQIGGMTCQSCANRIEKVLNKKPFVQQAGVNFAVEEAQVVFDATQASETQIIEIIHKTGFSAHIKQANELPIEENTSIPWRLIILWIINIPFLIGMLGMIGGSHHLMLPPIWQFALASIVQLWLAIPFYRGAIGSIRGGLANMDVLVSTGTLTIYLYSAFMLFYHADHAMGHVYFEASVMVIGFVSLGKFLEDRTKKHSLNSLSMLLQLTPKKVTVLRNEKWTEIALDQVNIGEIIRANQGERIAADGIIESGNGWCDESHLTGESRPEEKQKGGKVLAGAMVTEGSIIYRANQLGSQTLLGDMMNALSDAQGSKAPIARFSDKVASVFVPAVLVISLVTFTLTYILTNDSVSSLIHAVSVLVIACPCALGLATPAAIMVGLGKAVNAGVWFKDAAAMEETAHVDTVVLDKTGTLTKGELEISALWQPQSAVYSEEDLYRFAAAVERQANHPIAKAIVQAAEQKMLDIPTALFSKMEVGQGIQAELEQVGTIKVGKPDYCGLILPKNLEDIWQIASIVAVSINDKPIGAFALTDTLKNDSLHAIQRLQRQNIDVVIMSGDQQSVVDYIAKQLGINKAFGGLSPRDKAEQIQKLKAQGHIVAMVGDGINDAPALAAANVSFAMKSGSDIAEQTASATLMQHSVNQLVDALFIAIATLKNIKQNLFFALIYNILGIPLAAFGFLSPIIAGAAMALSSISVLMNALRLKKVRF
>LR134171|400594:404089|401447_401654_+|VEB28036.1|DBSCAN-SWA
MKTITLNIKGIHCGCCVKSLTQVLTELDGVQSADVQLEGKVNITFDENRVNVAQLIEVIEDAGFDATE
>LR134171|400594:404089|401155_401362_+|VEB28035.1|DBSCAN-SWA
MKTITLNIKGIHCGCCVKSLTQVLTELDGVQSADVQLEGKSNITFDENRVNIAQLIEVIEDAGFDATE
>LR134171|400594:404089|400875_401082_+|VEB28034.1|DBSCAN-SWA
MKTITLNIKGIHCGCCVKSLTQVLTELDGVQSADVQLEGKVNITFDENRVNVAQLIEVIEDAGFDATE
>LR134171|400594:404089|401739_401946_+|VEB28037.1|DBSCAN-SWA
MKTITLNIKGIHCGCCVKSLTQVLTELDGVQSADVQLEGKANITFDENRVNVAQLIEVIEDAGFDATE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB28033.1|400594_400801_+	mercuric ion scavenger protein	A0A218MNH0	uncultured_virus	3.3e-09	50.7
VEB28034.1|400875_401082_+	mercuric ion scavenger protein	A0A218MNH0	uncultured_virus	1.1e-09	50.7
VEB28035.1|401155_401362_+	mercuric ion scavenger protein	A0A218MNH0	uncultured_virus	8.7e-10	50.7
VEB28036.1|401447_401654_+	mercuric ion scavenger protein	A0A218MNH0	uncultured_virus	1.1e-09	50.7
VEB28037.1|401739_401946_+	mercuric ion scavenger protein	A0A218MNH0	uncultured_virus	3.0e-10	52.2
VEB28038.1|401920_404089_+	copper transporter	A0A218MNH6	uncultured_virus	1.0e-193	51.4

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>LR134171|1101241:1111066|DBSCAN-SWA
GCTAACGCTTCTTTCTCTTGGCGGTAAAAACTTTCAATTTCCATTTGTGGATAGCCTGCCAGCAATCCATTTTTAGGTAGATTTTTTGGCGTTTGTAGGTTAAATCGCCGTTAGCGTGCATACGAAGTGTGCCAATCTCTTGGTTGCTTAATTTATATTCGAACCAACAATCGCCATTGTTTGCCCCGATATTTAAATAGTCTCCGCGTGAAGCATAATGCGGGCTGTCTGAAATACGGATATTTCTTTTTGCCACAATACGATTTTCAAAGGTTTTCTCGCCATTAATGCTTTCGTTACCATTTAAACCAACCTTTCCATCCGCGGTAGTTTTGGCTTCTACTGCTTTGTCATAGGCGGTTTTCACGGCTTTTGATGTTGCAGCTTCGGTTTCGCTGTCGCTGTTAGTGGCTGAGCTTAGTTGCACGATCCCATATTGTTGTAACGTTGCCCGTGCAATTTCATTTAAGGCAAATTCCCCATCCACGCAATAAGTCAGGGAAATTATCAACTTCGCCTCGTTTTGCAGATGATGCAAAAATGCTTTCATCTGGCGTATTTACTAATGCCATATTAAACCGCCAAATAGATTCAAAGAGCGGTTTGAATTTTGTCGGAAATTGAATATTAAGCTGGCTCATCGCTAAATGTCACATTAATCACAGTAGGTAATGGCTTGCCATCGGTTGTTACATCAACTTTATTGGTAAACATCCCTAAATGCTTCCCAAGCAATTCAAGGGCTTTATTTGCACCTGTCGGTTCAAAAACGAAACATTCGGTATTAACGCTTTGTGCCGTTCCTTCTTGAGCATTTTTTACCACAGTGGTAATAGTAAGTGGCTTTCTTCCCATACAAATATCACGATACTCTTGCAAGTCCGCAATGATATTATCTAGGGTAAGATTATGGCGTTGTCGATGCTCTTGTTGAAGCACATCAATCCTTGATCTAATCTTGATCTTATCTAATTCTTTTTTAGCCAATCGGTTTATACTTTCGGACTTCATATCTTGGCAATCATAACTCTGCCGATATGCTTCACTGGCATTCCCCAGCTCAATATAAAGCTGGCAAAATTTTTCTTGTTTAGGTGTTAATCCACGACCAGACGTGGATTTTCCTTTCACGTCTGACATAGGAAATCCTTAAAATACTTGAATAAAACTTATAAGCCCTATTTGCCGCCTTTTGCTTGATTAATCCACTTATTGAGATTATCTACTTGGCTTGCGCATTTATCTCGCTCTGCGGTTACCTTAACAAGCTGTATGACGACATCGCCGTATGTTTCCCCAGTAAATGCTGTTTTGACACAAGGTGCAGTATAGGCTTGAGGTGGGTAAATATATTCTGCGTTAGTCGTGATTTTATTCGTGCAAGCGGTCAAGAACAGACCGAGGCAAACGAGTGTGAGCGCAAGGTTGAGTCTTAATGATTGTTTTAACTGATTCAGCATTTTCTGTTGCTATCCTTTCTATCTCATTATTACGCTCTTGTTGCTCAAATAACGCTCTTGTTGTAACGCAAGACTTAATGATTTGTTAGCATTTTCTTGTTGTTGGATGGCTTGGGCTTGTTGCTTTGTCGTTATTTCCAACTCATCTATAACGCCAGACTGGTAACGCAATGCACCAATCAAAACCACTACAACAGCCCCTAACGCTATGTAAATGTACTTAGTCATTATCCGTTACCATTAATGCTCGATAGAGCTTACAACGCTCATCAATGCCATTTAGTCCACCATTAATTCTTCGCGTGACTTTTTCGACAGAATTAAGCTCAGCCTACTCATAGCACTTCCAATACCACACAGCAGTTTTAACAGATAAATCTAAATTCCCTGCTACATCTTCTGGCTCAATATCTCTACCTAACCATTTTCTAAACGCGCCATAATTATCCTTACCTGTAATCTGAATCAGTCCACGACCACGATACTTCCAACCATCTCCACTTTTCTCATCGCCATTACCCAAACGATTAGCATAAACACGATTGGCAATAAGTTCAGGTTTGTGCTCATATTTCTTCGCTGTAAGAGGGTCTGGGAAATATTTACGGAAAGTTTTAGAAAGCCCAAGCCAAGAATAATTTAAATTTTCTTTAAATCTTGTAAATCCGCCACTTTCATGTCCACATTGAGCTAAAAACATCGCTTGCTGCATCTTATTCACACAACCTGCTTTTTCTATCTGCGCCGAAATAGCTTGATAAACACCTTTAACTGCGTGTGGAAAAATTTTATTAAATGTCACTTCGGAAATCATCATTGTCATCTTTTTCAATTCTCCGATTAATGAATTTAAATAAAAACTCGCGAATTTTTTCAGTACCAACAAAACCAATCATCGTACCGAGAAATGAAGAATATTCTGTATGCTCAAATAAATGTGTACAAATTGGCACCGCAACACCTGCAATAGAGGCACACATAGCCGCATCAATTAAAACATAACGAATAGCTGGCTTTTTACGCATAAACCCAAATCTTAAAAGAGAAATAAATAACGCCCAAAAAGCACTCTGTGCTGAGCTAGAACTAAGATTTGTTTGCAACCAAGACCATATTAACGCCCATACATCAGGCTCTTTAATTGGCATATATTTTCTCCCGCCTGTTCTTTAGGCAATAAAAAAGCCCCGACCGTTTCCGATCAGGGCTGTAAAATTCTTTTGTGCGTTTGCTATGCACTAAAACCGCAATATAGTACATATAATACACTTTTAGTGTGCACTGTCAAGCGGTTTATGAAGTGCGGTAATTAGTGATGACGTGTCGCAAATATACCCATCGCAATCTTGGTTTAAATTGAGTTCGTATGCTGCCCATAACAACGCCACCGCAAAGAGAATTCTGAACATAATGTATCCTTTTTCGTGAATTTGAGGTGTAAAAATCCGCCACACGGTAAAGTGCGGTCGGATTTTGTGGTGTTTTATTGGGCGATGAGGTTTTTCGCTCTTTCCCAATTCATTTGATTAGACGCTTTAAATGGCGTAATCAATTTTTGAATAGTTGGGAGCGTGTTTTTGTATTGTCGGCGATATTCTTGATGATGGCTGATTACCATTCCTGTGAAATAAGAGCCGATAGTTTCTAGCGGTTTGATCATATCGCCAAGTAAGGTGTTCATTTGCTTGTGTCCACACCAAAGCCAGACGAGTTGTTCGAGTTCGTACTCAGTAAATTCAAAAGTAAATTTCTCTGGTTCTGGCAGTGCAAGCTGTTGTGGTTGAAGTTGATATTTCCCTGTCTTTCTAATAGCTGGTAATACTTCTGACGTAACCCATTTTCTAAAACGGTGTGGAATAGATCCTTTTTTCACTGCATCACGGCAACGTAAGATCAAAGTGTACATTCCGCTTTCGCTGATGATATTCACTTCTTGTTGTCCGCTAGGGGTGTAAATTAAACTTACACCCTTTTCATCTTCATCTAACGCAATTAAAGACATACGAGAGTTTGTTAGACCGATTGCGTCACAAACGTCCTTTGCAACGAACCAAGGTTCATTGTTTATAGCTAAAGTGCGGATAGAATTTGATTCAAAATTGAATGTAGAGAGTTGGGCTTGAATTGTCATAACTGATACCTTTTCGAATTTTATGGCGGATAGGTGGTTCGAAAACCGCTCAGTTAAACGGCGTATGGTATTGAATATTCCCATACCCACCTATCCATTGGTAAAAATTAGACATAAAAAAATCACATTAACGCAGTGAAGTGCGAACTGATAATACAAGGAATTGGGTTTCGACTCCCTAGACCTTAGGTTTGAGTTTAATAAAAACCCTATCCGCTGTCAATACAAATTAGGGCGCCGGGTGGTTCGAAAGCCGACCAAAAGAAACGGCTGGGATTATTCCCCTTTCGGGTGTTGTATTCTCCGCCCGCCCGACATAGATGAAATTGGATTTATGCGTGTTAAGTCTTAATGGCAATAAAACTAAACGAGATCACAAATTTTGCGCATAAAAAAAACCGCTATGCTATCGGGTGCGGACTTCCGCTTTTGGTTTAAGGTTTCGACACCTTGAATAAAATACTAGAGGAAAATTTGGAGAATGTAAAGCATGAAAATTACATTTTATTGTGAACCATACTTGACACCTTGAGGAAATTATCTAAAATAATGTCAAAGCAATCGATAAGGATTAACAATGACAATCCAAATCAAAACCACTCTGACATTTGATTCTTGGTTAAGCAAACTAAAAAACTTGCGTGCCAAAGCGAAAATAAACGCACGAATTAAACGCTTACAGTTCGGCAACTTTGGTGATATCAAAAGTGTGAATGATGGGATTTTTGAATTACGGATTGATGAAGGTCAAGGTTATCGAATTTATCTTAAAAACCAGAATGGCGTATTAGTGATTTTACTTTGTGGCGGAGATAAATCCACACAAGAGAAAGATATTAAACAAGCAAAACTTCTCGCACAGGAGCTAGGATTATGACTGAACAATTAAAAGACTTTGATGTGGCAGAACACCTCACTTCTGAAGAAGAAATTCAACTTTACCTTAATGAAATTCTACAAGAAGATAATATTGAACTTATTTTATCCGCCCTTGGCGACATAGCCCGTGCGCGTAACATGAGCCAAATCGCACGTGATGCAGGGATAAGCCGAGAAGGTCTTTATAAAGCCTTATCTGGCACGGGCAATCCTACTTTTGCTACTGTAATGAAAGTAATGAAAGCCTTAAATTTACAATTCCAAGTGCAACAATCTCGATTCGCCTAAAAGAAATGCGGTCAAAATAGACCGCACTTTTCAGGCAATAAATAAACATTGCTTGCCTTCTGTTGATAATAGCAATAAAAGTGATGTTTTTACCATTTTCAATCGATTGAAATATTCACGCCGTGAAATATGTAAATATCGCCAAATTTCTTGTTTTTCCCATCTCTTGATATAAGTCAGAACGAATACATCATAAAGTTCTGGTGTGACTTTTCTAATTACACCAAGGTAGCCATCAATTTCCATGCCTAATTCATCGCTTATAGGACGCATACGATATTTTTCAGCATAACGTGCATCACATTTCATTTCTGCAAACCCTGCAGCTACACGTGGAAATTCAGTCTCATAACGAGGTGTAGCCCAATAACCAAATTCAACTGAAATCACATCAATATTCACGTAAGCTCCTTAATTTTTGCCTTGTAATGCTTAATCATCGCCTCGCAATCTTCAATGGTGTATTTCTTCGGTTCGTGGTCTTGCCGTTCTAACCAAGCTACCTTATCCGCACCGATTTTATTGACGAGATTGATTCTGTACTCAATAATATTTCCGCTCTTGTGGTCATTACAGGGGGCGCATTGTTTGTGTACGTTTAGCTCACAAAATCTTAATTCAGGGCAAGCCCCCACACTCCGATAATGCCCTGCATGGTATTGCCCTTGATGATACCGACCGCAACTGATACAAGGTTCATTTTTATCTCGCAGGCGGATAAATTTATTAAAGACTGATTGCGCCTCTTTCAGCCATTCTGAACGACTTTTTAATTTAGCCTTACGTTCCCTTTGTTTTTTCTTTTCTGCTCGTTCTTGCGTTTTTTGCGCATTATCTCGAGCTAATTTAATCGCACATTCAGGCGAACAAACCTTTTGTGTTGAGCTAAAGGTTTTTACAAACGCTTTGCCGCAGACTTTGCATTGATACTCTTTCGCCATTAGCCAAACACCATATTAAACATTACCCAAACTGCCGCAATCAAAAGTACAATTTTTAACTCCAAAATTTCGTCATCGTTTAAGCGTTTCATTTAAATCCCCATCTATCGTTAAATCTCACGCCATTTTGCACGCCCCAACTGGTCACATACTCGATAAGGCTCGCCATTCTGCTCACGCTCATTTGAGCCGAACTTTCACGGATATTCACAAATCCCCCCTCAAGACCTGGCACAACATCTGCTTTTTGATTAGTGGCGATTGCGTGACCCGAAATAAACAGTACCTTCCATTGCTCCATTGTAAGCTTACGCCCCATAAATTCAGCCTGATTTGCAACATCTTGGCACATAGCGTGAAACTTGGCGTTTTGCTCAAGGTTTCGTGTTATCGCTTGGATTTTGACTACCAACGGTTTTTTATCGTCCGTTGGCAGCTCTTTGATTAAATCCAAGCAATTATTTTTAATGCGTTGATCGCGTAAAAAGAAAGGTTTGTATTGGCTCATCACATCATTCCCAACGCTTAAATAACATCGCAATACTCATTCTTTGTACTCCACGCCTAAATCTTCCAACCCAAAATAACCGCAAGATTTTGTTCGATTTACTGCGCTGTATTTGCTTACCTGCGGAAACGGTATCGGCTCAATTAAGTGACCGTTACAGCGAAAACGATCGTCATCCCATTCGCTGCTCGATATAAAATAATCTGGCGTATAAAAATCCTCTAATTCCGCACCGCACTTTGGGCATTTATAGCTTGTCATTGCAATGCCCCTTTCATCATTGCCATCAAGCTATCTCGCGCCTTATCAGCCTTCGCTTTATCGTAAAAACTTGGCTTTTCAGGAATCATTTTCGGAATATCCTCAAAAGGAAAATTCGACCGCACTTTTTCTGCCGCTTTTGTGAGTAATTTCGGTATAGCTTTCAACGTGTCCTCTTCCGATTTTTTCTTGCACTTTTCGTACAGATTTTTAAGCAACCAAAATTCCACTTTTGAACGATATTGAAATTCATCCCGATTGAATCGGGCATAACCTAAGAAAGTGTTATAACGTTGGTATAATTCCGCTTCGTTCGGTAAACCCAGTGCGTGATAGTCATAGGCTTTGCACCAAAACACAAACAACCCTACGCTAGGTAAAAATTTATCAAGAGAGTTTTCTGCTTCATAAAGCCCGTTCTCCAACTGAGGTCTCGTAATTTTTTCTCGTACCAATACACGCAACCAAGTTTTTTTAGCAGAAAGATAATCCGCTTCGGTTTCAAAGGCTGCACGCCAACCAGGAAAAATCGATTTAAGCTCTTGAAAGAGCCAGTTAATCGTCTCTTCCGCACGCTGTGCACGTTCTGGCGGGAGCGTGTTAATTTGGTCTTGTGTTATGGAATTTTCCATTGCGTACCGTCCACTGTGAAATTCATTCCTGCAGACCAGCCTGTCTGCGTATCGTCAAATTTGGGTTTATTGGGGTGTGATTGCCCTAAGTGCGGTGAATTTGGTCGCAGTTTCTCATCACGCCAATCCCACGATGCGTTAAATCCCTGCCAGTTGCGTTCGATGCAAATCTCCACCACTTCACAAATCGAAATTCCTGCTTTGTCCGCTTGTTTTTGCAAACGGCTAAGTTGCGTTTCGCTAATTGCCCCTCGCTTAGTTTTACGATGCGCAATAAAATCTTTAGCAAGCTGTCCTGTTATGCCAAACCGCTCAAGCAAAATTTCGGATTCGCTTTTTTGCGTAGTTTTTTTAGGTTCATTGACTGGTTCTAAAGAGTGACTGGTTATGGGTGAAATATTTTCACTACCCCCTAGTGCAAAATTTTCACTACCTTGTTCAAGGTGTAAAAAGTATAAATTTGAGATGGAACCATCTTTATTTTTACGTTCTTTTTTGCTTACTAATCCCATTTTGATTAAACATTCAATGTGACTGATTGCACTACGTCGGGTCATCTCGCATTTATCGGCAATGTATTGATAACTAGGAAAACAAATTCCATCATCATTGGCATTGTCGGCAAGTTTTAAAAGCACAAGTTTTCTAGCAGGATTGCCAACCTTACAATTCATTGCTTGAACCATTAATCGCATACTCATAGCATCAACTCCGAAGCATAACGTGACGCGATAAATTCAATGCCTTTGCTTGTTACACGTGTCTGAGTGTAATTGTGACCGTGTTCGGCAGTACCTGTTTTAACCGTAAAAAGATCTTTGGTGTGTGCCGATTGATATGGCAAAAGCACGCCTGATTGACGATACAAATATTTATCTTCCACCAAGCGATTGACTAATGCGCGTTCAGGCATTTTTAAAATCTTCGCCGTCTCACGAAATGATTTACTCGTCCCTACTTCCACATAGTGATCAACAAAAGCGACTTTAGGCGCATTACGCTCTTTTTCTGCTTGTAACTGAGCGGCTAACATCAACGCCTTAGAAAAAGATTGCGGAATAAGTGCGGTTGGTTTTTGTTGGTTTTCCAACGCTTGCCAGCGATCAACAACAGCGGCGGTAAACTCAGGCGATAAGCGAGCGACAACAACAAACGTATCTCGCTTGTTTAACTCGTAGTAATCAAACCATTGATTTCTATACTCAAATTTTAGTGGCTCAATTTGAGCGACTAAATTTTGTTCAATCAAATCACGAATAACACGTAATACATTTTTGTGTTCTTTATGTGTAATCTCCGCAATTTCCCGACTACTCATTGTCAAAATACTTGCGTTTTCTTTCGTAATCGTTAATAATTGATTCGTCTGTATATTCCTTAATGAATTAGCCACGAAATTTCCTCGTGGCTTTTTTATTTACCCAAATACTTCTCACGTAACCGCTGATCAAAGCCTTGTGACGCAAGGAGTAACATTTCAAATTCACTTTTCTCAATCGCAATGTGCGTATCCGTATCAAAAACACCGAATTGACACGCGGCGATAAAGTTAAATGTCTGAGTAAACTCTTCATTACTAATAAAGCGACTCAGTGTGCTAGACGCGGTTTCCATACCTTCTGCCACCTCGTACTGCTTTTGCTTGTAATATTTTTCGATAACCTGATTCGAAAGCACTCTTGCGGATCGCGTTAATTCATTGCGTGCCATTGCGTATTCCTGTTGGTAAATTAGCTTTGAGACGGGAACACATCCTCAATACAAACTTTTGCCCCAAATGAGTTCAGAGTTTGAACAATCTTCTGAGCAACACTTAACGATGGAGAACGCAATCCAGTCTCATAATTAGCAATTCGTGGTTGACTCCATCCGATATGGTTGGCTAGTTGTCGCTGAATAATCCCAAGCTGTCCTCGAATCTGTGAAAGGTTATTCATTAATAAATTTCCTTTTGTGATTTTTTTCAATCCATTTAATCACACAATGGAATTTATATTAATCGCAATTTGTGAAATTATCTAAATATAACGTAACGTGTTATTATTTGAACTAAAAGAAGGAGAAATAAAATGGCTACACTTGGCGAAAGAATAAAAGCGTATCGAGAACAGTTAAAAATCAGTCAAAAGGAATTGGCTGAGAGATGTAATAATATTGATACCAAAAGTGAGAATGCGCGTTGGGGACAACCGAGAATTGCTAATTATGAAAAAGGCAATAGAACGCCTGACCTCGAAGATATATCTATCATAAGTAAAGCACTTAATATCCTGCCTGAGATTTTAGCCTTCGATTCAAACATAAGCGAGATCAAAGAGTCAAGTTGTCGTTATCCATTATTAAGCCCAATCCAAGCAGGACTATGGACTGATATTAGATCGCTCGAAGGATTTGACGGTTACGAGATGATCCCAAGCACTGCCATCGCCTCTGAAAATTCCTTTTATCTACGAATTGAAGGGAAATCTATGCTCCCCCGATTCAACGAGGGCGATCTGGTTTTAATCGATCCTGATATTGTGCCAACGCCAGGAAAATTCGTGGCAGCAATTAATGGCGACAACGAGGCGACATTTAAACAATACAAAGAGCTTGGCACGAAAACACCAGAAGGCATACCGCACTTTGAGCTTGTTCCGCTTAATCCTATGTTCCCAACATTAAGCTCGCTCAACCAAGAGATCCGCATTATTGGTGTGGCAAGAGAGCGTGTAGAAACGTTATAG

Protein sequences of DBSCAN-SWA_2

>LR134171|1101241:1111066|1110070_1110277_-|VEB28657.1|DBSCAN-SWA
MNNLSQIRGQLGIIQRQLANHIGWSQPRIANYETGLRSPSLSVAQKIVQTLNSFGAKVCIEDVFPSQS
>LR134171|1101241:1111066|1104183_1104831_-|VEB28645.1|DBSCAN-SWA
MTIQAQLSTFNFESNSIRTLAINNEPWFVAKDVCDAIGLTNSRMSLIALDEDEKGVSLIYTPSGQQEVNIISESGMYTLILRCRDAVKKGSIPHRFRKWVTSEVLPAIRKTGKYQLQPQQLALPEPEKFTFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFTGMVISHHQEYRRQYKNTLPTIQKLITPFKASNQMNWERAKNLIAQ
>LR134171|1101241:1111066|1110409_1111066_+|VEB28658.1|DBSCAN-SWA
MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEILAFDSNISEIKESSCRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTAIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGDNEATFKQYKELGTKTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL
>LR134171|1101241:1111066|1105408_1105708_+|VEB28646.1|DBSCAN-SWA
MTIQIKTTLTFDSWLSKLKNLRAKAKINARIKRLQFGNFGDIKSVNDGIFELRIDEGQGYRIYLKNQNGVLVILLCGGDKSTQEKDIKQAKLLAQELGL
>LR134171|1101241:1111066|1109753_1110050_-|VEB28656.1|DBSCAN-SWA
MARNELTRSARVLSNQVIEKYYKQKQYEVAEGMETASSTLSRFISNEEFTQTFNFIAACQFGVFDTDTHIAIEKSEFEMLLLASQGFDQRLREKYLGK
>LR134171|1101241:1111066|1107027_1107447_-|VEB28651.1|DBSCAN-SWA
MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQAITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGGFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK
>LR134171|1101241:1111066|1106396_1106939_-|VEB28649.1|DBSCAN-SWA
MAKEYQCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAQKTQERAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCEAMIKHYKAKIKELT
>LR134171|1101241:1111066|1108324_1109041_-|VEB28654.1|DBSCAN-SWA
MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIECLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGSENISPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFIAHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWKIP
>LR134171|1101241:1111066|1109037_1109733_-|VEB28655.1|DBSCAN-SWA
MANSLRNIQTNQLLTITKENASILTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQALENQQKPTALIPQSFSKALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML
>LR134171|1101241:1111066|1105704_1105998_+|VEB28647.1|DBSCAN-SWA
MTEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMSQIARDAGISREGLYKALSGTGNPTFATVMKVMKALNLQFQVQQSRFA
>LR134171|1101241:1111066|1107483_1107708_-|VEB28652.1|DBSCAN-SWA
MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE
>LR134171|1101241:1111066|1106938_1107031_-|VEB28650.1|DBSCAN-SWA
MKRLNDDEILELKIVLLIAAVWVMFNMVFG
>LR134171|1101241:1111066|1103971_1104109_-|VEB28644.1|DBSCAN-SWA
MFRILFAVALLWAAYELNLNQDCDGYICDTSSLITALHKPLDSAH
>LR134171|1101241:1111066|1101241_1101790_-|VEB28639.1|tail|DBSCAN-SWA
MKAFLHHLQNEAKLIISLTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTADGKVGLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLNIGANNGDCWFEYKLSNQEIGTLRMHANGDLTYKRQKIYLKMDCWQAIHKWKLKVFTAKRKKR
>LR134171|1101241:1111066|1102418_1102700_-|VEB28641.1|DBSCAN-SWA
MLNQLKQSLRLNLALTLVCLGLFLTACTNKITTNAEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDNLNKWINQAKGGK
>LR134171|1101241:1111066|1107704_1108340_-|VEB28653.1|DBSCAN-SWA
MENSITQDQINTLPPERAQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGLYEAENSLDKFLPSVGLFVFWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKPSFYDKAKADKARDSLMAMMKGALQ
>LR134171|1101241:1111066|1101867_1102380_-|VEB28640.1|terminase|DBSCAN-SWA
MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCQDMKSESINRLAKKELDKIKIRSRIDVLQQEHRQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA
>LR134171|1101241:1111066|1103491_1103848_-|VEB28643.1|holin|DBSCAN-SWA
MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFEHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI
>LR134171|1101241:1111066|1106028_1106400_-|VEB28648.1|DBSCAN-SWA
MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKMVKTSLLLLLSTEGKQCLFIA
>LR134171|1101241:1111066|1103031_1103523_-|VEB28642.1|DBSCAN-SWA
MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKKYEHKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYGAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB28639.1|1101241_1101790_-|tail	tail fiber protein/phosphomannomutase	Q94MY0	Haemophilus_virus	8.6e-20	49.2
VEB28640.1|1101867_1102380_-|terminase	Probable bacteriophage terminase, small subunit	A0A1X9SFE5	Acinetobacter_phage	8.0e-20	39.2
VEB28641.1|1102418_1102700_-	putative lytic protein Rz1, bacteriophage protein	Q776X1	Haemophilus_phage	1.2e-30	72.2
VEB28642.1|1103031_1103523_-	Putative phage lysozyme	Q7Y5V0	Haemophilus_phage	4.6e-49	58.0
VEB28643.1|1103491_1103848_-|holin	Putative bacteriophage holin protein	NA	NA	NA	NA
VEB28644.1|1103971_1104109_-	Uncharacterised protein	NA	NA	NA	NA
VEB28645.1|1104183_1104831_-	Putative prophage antirepressor protein	D0UIK6	Aggregatibacter_phage	1.8e-61	48.6
VEB28646.1|1105408_1105708_+	addiction module killer protein	A0A141GEX6	Brucella_phage	1.0e-19	44.2
VEB28647.1|1105704_1105998_+	putative transcriptional regulator/addiction module antitoxin	A4JWV1	Burkholderia_virus	8.3e-14	46.6
VEB28648.1|1106028_1106400_-	Uncharacterised protein	NA	NA	NA	NA
VEB28649.1|1106396_1106939_-	ning recombination protein	D0UIK8	Aggregatibacter_phage	7.6e-61	70.1
VEB28650.1|1106938_1107031_-	Uncharacterised protein	NA	NA	NA	NA
VEB28651.1|1107027_1107447_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	3.7e-55	74.6
VEB28652.1|1107483_1107708_-	Uncharacterised protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
VEB28653.1|1107704_1108340_-	phage replication protein	A0A1P8DTF3	Proteus_phage	3.5e-17	33.3
VEB28654.1|1108324_1109041_-	Uncharacterised protein	D0UIL5	Aggregatibacter_phage	1.0e-60	60.5
VEB28655.1|1109037_1109733_-	Probable phage repressor protein	D0UIL6	Aggregatibacter_phage	4.2e-56	53.4
VEB28656.1|1109753_1110050_-	phage aaphi23	Q7Y5W3	Haemophilus_phage	2.4e-29	67.3
VEB28657.1|1110070_1110277_-	cro repressor	A0A0M3LSY2	Mannheimia_phage	9.6e-17	66.2
VEB28658.1|1110409_1111066_+	prophage repressor CI	A0A0M3LSL8	Mannheimia_phage	7.2e-66	58.9

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>LR134171|1174888:1181520|DBSCAN-SWA
ATCAATCGCTTTTAGAGCCTCTAACGCCTTCATTTCTAGACTTAAAAAGCACGCCTGCATCTTGTAGGTTAATACGGATAAATCCGCCCTTTTTTGCTTTTGCCGTACGTTCAGAAAATCGACGCACAGTTGGAATGGCTTTCCCTGCACCCAGTTCAATGACGACGAGATTTTGCACTTCTTTTAACCACGATTCTAACCGCACTTTTTTAAAATCCTGATATTGACTTGCATAACTCCAATCATTAAACATTAGTACATTTTGACGAGCAAAGCCCCCACAATAAGGACAATGTGGTTTTTCACTGGTTAAACATACGTTTTTATTATCCACGACAGGTTGAAAACTTGATGCCGACCAACTTAATCCTCGACAATTATTGACACACTGAAGACGCTCCAAAGTACCGTGTACTTCATAAACATGGCTATCATCAAAACCAGCCTTTTGAAAATGCCCATCCACATTACTGGTAAAAACGAAATATCCGTGAGATTTAGCTCCCGCCCAACGTTTTAAAATCTGATACCCTTCGTGAGGAATAGTATTTCGGTATTGAACTAATCGATGCCCATAAAACCAATAGGCAAGTTCCTGATTATGCTTATAAGCTAGTGGCGTCGCGATGTCTTCAAAAGATATATTATGTTCTTTAAACATAGGATAAGCATTCCAAAATCCACCAACGCTGCGGAAATCGGGTAGCCCAGAATCCACGCTCATACCCGCACCAGCTGTAATTAAAATGCCATCCGCTTTGCGAATAAGTTCTACTGCATAATTTAAATCATTTTTCATAATACTTTTCTCTGTCCATTTTTCATTGGTGAAATAATACCCGCTTGTTCCAACTGTTCTAAAATTTGTCCAGCTCGATTAAAACCCAACATAAATCTGCGCTGAATCATTGAACAAGATGCAACTTTTTGTTGTTGCACAAATTTTTTTACATCCTCAAAAAGTGGATCTCTTGCCATAATTACTTTCATTGCCATTATTTGCTCCTTTTTCTTAATTAAAGGCTTTTATAAATATGTAAGAAGTAAAGAATTTCTCTTTATGGAAAAATTATATGAAAGGATGCGACAACTTGTGTCGTTTGCGAATGTTGAAAGCGGTTATTTTTAAAAGATCTTTTACAAATAAGATTATCCTTATTGCAATATGTATATTTATCTGGTTATATATACATGTAACTTTGTTAAGGAAAAGAATATGAATCATCAAAATCCGATTGAAATTTACCAAGCTCAAGATGGCACAACGCAAGTAGAAGTGAGATTTGAAAATGACACCGTTTGGCTAAGTTTACAGCAAATGGCTGATTTATTTGGGCGAGATAAGTCAGTTATTTCACGTCACTTACGAAATATCTATACTGATGGTGAGTTAAATAGAGAAGCAACTGTTGCAAAAAATGCAACAGTTCAAATTGAAGGCAAAAGACAAATTAATCGAACAATCGAATACTATAATCTTGATGTAATTATATCTGTCGGTTATAGAGTTAATTCTATTTTAGGTACTAAATTTAGAATTTGGGCAACTGCACGTTTAAAAGAATATCTGACTCAAGGCTATGCCATTAACCAAAAACGTTTACAGCAAAATGCTCACGAATTAGAACAAGCACTTGCACTTATTCAAAAAACGGCAAATTCAGCGGAATTAACGCTAGAAAGTGGTCGTGGATTAGTGGATATTGTCAGCCGTTATACGCATACGTTTTTATGGCTACAACAATATGATGAAGGTTTACTTGCCGAACCACAAACACAGCAAGGCGGTACATTACCGACTTATGCTGAGGCTTGTTCTGCACTAGCAGAGTTAAAATCACAGCTGATGGCAAAAGGTGAAGCAAGTGATCTCTTTGGACGTGAACGAGATAACGGCTTATCTGCGGTTTTAGGCAATTTAGATCAAAGTGTATTTGGTGAACCCGCTTATCCAAGCATTGAAGCAAAAGCGGCACATTTACTTTATTTTGTCGTCAAGAACCATCCTTTTTCAGATGGTAATAAACGTAGCGGTGCATTTTTATTTGTAGATTTCTTACATAGAAATGGGCGTTTGTTTGATCATAATGGGCATCCAGTTATCAATGATACTGGGCTTGCAGCGCTCACTTTATTAGTTGCAGAATCTGATCCGAAACAAAAAGAAACACTCATTAGGCTTATTATGCATATGCTTAAACATAAGCAAGATCAGCAATGATAAATAGCGACCGAAGTCGCTATTTATCTATCAACGTTAAACTTAATAAAAAAATTATTTACATAATTCTTTTACTGACTCTACTAATGCTTCCATTTTGTCGTAAGAATTAATGCCACTTGGTCCACCAAAAAATGGGCAAACACAAATTAAAGTATCATTATACTTGCGATAGAAGATATTAAACTCTTTCAACGCTTTAGTTTCATATACGGCTTCTCCAGTAAAAAACTTAAAGAAGTTATCTTTTTCAGTGACTCCCGTACAAATAATAACTTTAGGATTACATTCATCTATAAGTTGACGATAAAAAGCACCGCGATTTTGAACGCACCACTCTCTATATTCATCGAATGTTTCAAATCCAGTCATCTTAATAAATTGTTCATTCCATTTAATCGATGATCTATTTTTAAAATTGATTGGTAGCATATTTAATTTGAAACCAATACCTTGTGGGGAAAGCACATCGTATTTTTTAACAAAATGCTCCGCACTTTCTCCATTTTTCCAATCCAAATTGTAGTAGTACCACAAAAACCAACATAATTTTTGATTATATTGTGTAGTCCAACTACCATCAAAATCGTCCTCTAACCAAGAGTGCGCTATTAATTTAGGGCTTAAACTAAATTTCTTATAAAAATCATCAGGAGAAGCTTCATCACCAATCCCCCATTCTAACCCACAAAACCACACTTCTGATTTAGGGTTTCCGCCATCTCCACCAGCAAAAGATACCGCTACTTTTTTAAACTCTTCTGTTACCATTATTTTATCCTCATTATTTAAGTAGATTTGTCCAAATCCCTATGGTTTCTTCTTGAATTACGCCTTTTTCTTGACCTAATTTTATTGCCAGTTGCTGTAAACTTTTAGCCAACTCAGTATGACCGCAATAATTTAAACTACGAATGATGCGGGAAATCTTCTTACTTTCATGCCCGATATTACGTAGCCAAACTTTACGTTCACTCAATTCTGTTTTTGGGAATATTTTATTATCTTCACGATATAAACAGAAGTAATCCAGAATAATATCAATAGAATGTAAATATTTATTTTGAATTGCTTCATCTCCAATAAAAATAGCCAGGTCTTCTTCGTTAAAAACCGGTACTGAACGATTCCATTTGGAACTTTCAGTAACAGGTAAAAGCCAAGGAATATAAAAATAAGCATCGCCAATCATTCTTTTTGGCATTGCCCACATATCTTGCAAAGATAAATTATGTTGGCTTTTTCTTTGTTCTAAATAAAATTCAATTACTGGATGCATACGTTTCTCGTTAATTCATCAGTCATACAGTATAGTGATATAAAACTCGCTATTTATGTGAAAAGTGCGGTCATTTTTCTATGAGTTTTTGGTGTTCTCTAATAACTCTGCCACCACTTTCGGCACACCCTCGCCTGCTTTTTCTTTTATTGCAATAACTTGCTTACGAACAAAGCCTGTATTTGGGTTAGGATCAATCAAATAAATTGGCGCTTTTCTTGGGGCTTCATTGACTAAGCCATTGGCTGGATACACTTGTAAAGAAGTGCCAATCACTAACACAACATCTGCTTGTTCCACAATATCAACCGCTCGTTCTAACATCGGCACCATTTCACCAAAAAAGACGATGTAAGGGCGCATTGGGTGTCCATTTGGATCTTTATCTTCTAATTTCTGATCACCAAAACAATCCACAATATAACTTTCATCAAAGCTACTGCGAGCTTTATTTAATTCACCGTGTAAATGCAACACCTTCGAGCTGCCGGCACGTTCATGTAAATCATCCACATTTTGCGTGATGATTCTCACATCATAGGCTTTTTCTAGTTCAACTAAGGCGAGATGCGCAGCGTTTGGCTTAGCTGCTGCCGCATTTTTACGGCGTTGGTTATAGAAATCAAGCACTTTCGCACGGTTCTTTTGCAAGGCTTCGGGCGTGCAAACTTCTTCTACTTTATGCCCTGCCCACAATCCATCTTCAGCTCTAAAAGTAGGAATACCACTTTCGGCACTAATTCCAGCTCCCGTTAATACCACGCAAATTGGTTTATTTTTCTCTGTCATTTTTCAGGCTCCTTTTATTAGCAAACTGTTCTGTACCAAAATGAACATGTTCGCCTTGAAATTTACCAGCTCCATTTTTAGTGCGATCATCAATTAAATAATCACCTTGGTTGAGATTTTTATGATGGGATAAAATCAATCGTTTGTATAAGACTGAACCTTTTTCTTCACCGAAATAATGTTGAATCCATTTTACTTTATCACTCCAAGCGGATGGATTATGCCAAGGCGCAGTAGAAAGCACATAAATATGATATTTTTTCATCAATTTATGCACCGCAGAAATCGCGTTTGGCATTGGTTCCATTAAGCTAAAAATGCCCTCTACTTCATCATATCGACCTTCGTACTCTTGCTTGGTTTTCTCATCTAATTTTGCAATACCAGACGGAAAATCAACCATCACATTATCCATATCAATATAAACAATTTTCTTCATTTTAATGCCCTCTCTGTTGATGGCTTAATGATAAAAGATGAAGCGACAATTTATGTCGTTAGGCATTTTCGTCTAAATAAGTGCGGTCAATTTCTTGGTAATCTTCACCAAAATGGGCAATCCACCATTCCAGCATAGCGCTCTTAATCACGGTAGCGGAAATTTCATATTCAGTGCCACAATCTTTTACTGTTTGATCCATTGATAATGGTGTTTCTGTTAAAAATCCACCAATATCTTTATTAATGCGGAAAGTTAATCGAATTTTTCGACCATAGGTAAAACCAAACTTTTGGCTTTCTACATAAGATTTCAAATTAAAATCAGGGCGTTCAAATATCATTGTACTCACTGTTACCTTAAGCAAGCGATGCAAAGCAAGGTGTAAAATATCGCCATTCTCATATTGTGCGACTAAATAGCTACTTGGTCCTTGTTGAACCAAAGCCAATGGCTTGACCTGTGCCTTATGTTCTTTACCGTGAATACTCCGATAATGCACCTGTAAAAATCGATTTTGATAAAGTGCGGTACTAATTTGAGAAAAAATTTCTGGATTGATTTTGGCAGGTAATAACGGCTGACTAGTTGGGGCAATAGCAACTTTATTAAGCCATTCTGCCCCTGATTTTTTATGGCTGTCATAAACCAAATTATATTCGGCCTGTTGAAAGAACGCCTCCATTGAGTTCATAATGCTAGAAGGCAAAATGCCATTGAGATATTGTTTAGCAAGCATAAGCACAAGTGATTGCTGTTCATTTAAAATCGGTAAATCCAAGCCTTTAGCATTTGATTTCCATCGATATCCATAAGGTTTATCACGCATATCTCGCTCAATTTCAAACTGTTGAGACAAACTTTCTAGCTGGCGTTGGACTGAACGAATATCACGTTGAACGCCAATATCAGCAAGTTTTTGTAAGATTTCTTCTGCGGTAATAAAACGAGTTTTTGGAATAAGGCGTAAAATTTCAAGTTGAATTTGAAGTGCGGTTAAGTTTGAGGACATTTTATCTCCCAAATTTGAAAAAAATCATTATAAAAAATGCTGGAAAATTCCAGCATTATATTTTCTAAATCCGTCTGACTTGCCAGAAGGCTTTCGACCAATAAGGGTTATTCATTGAAGAATAGACGACTCCCCCTCTGGTGGAAGCATGAAGGAATTTATCTTCTTTTACATAAATTCCCACATGATAACCATTAGGGCCTCGGCCAGTTTTAAAGAAAATTAAATCGCCAGTTTGAATATCTTCTTTGCGTACATGTTTACCATAATTAGCTTGTTCAACAGTGCTTCTAGGCAAACGAAGATTAAAACGATCGAAGAAAGTTTTCTGCACAAAACCAGAACAATCTACCCCACGACGAGAAACGCCGCCGAGCACATAAGGTGTACCTGCCCATTCATGTTGTTGTTCGCTCAACATGGCTATGGCCATAATAGGATCGCCGATTTGACCTTTATAGTTCATCGCATAATCATCGTTTTGAAAACTGGAACAAGCGAATAAAAACAGCGAGGCAGTAGCGATTAAAAATGATTTATATACTTTCATACCTTTTCATATGAAAAGTGCGGTAGAAATTCACCGCACTTTTTGTTGCTTACTATTTAGTTTTTTCTACACGGGCACGTAACTTTTGCCCAGGTTTAAATGTCACTACTCGGCGAGCAGAAACTGGCACAACATCACCTGTTTTTGGGTTACGCCCTGGGCGAGATGACTTATCGCGTAATTCAAAATTACCAAATCCTGATAATTTCACATCTTGACCAGATTCTAGCGATGAACGAATCTCTTCTAAAAAGTTCTCCACTACATTTTTCGTATCTTGTTTAGATAAGTGATATTTATCGCTTAAATATTCAATAATATCAAGTTTAGTTATCGTAGCCAT

Protein sequences of DBSCAN-SWA_3

>LR134171|1174888:1181520|1174888_1175686_-|VEB28733.1|DBSCAN-SWA
MKNDLNYAVELIRKADGILITAGAGMSVDSGLPDFRSVGGFWNAYPMFKEHNISFEDIATPLAYKHNQELAYWFYGHRLVQYRNTIPHEGYQILKRWAGAKSHGYFVFTSNVDGHFQKAGFDDSHVYEVHGTLERLQCVNNCRGLSWSASSFQPVVDNKNVCLTSEKPHCPYCGGFARQNVLMFNDWSYASQYQDFKKVRLESWLKEVQNLVVIELGAGKAIPTVRRFSERTAKAKKGGFIRINLQDAGVLFKSRNEGVRGSKSD
>LR134171|1174888:1181520|1179673_1180627_-|VEB28740.1|DBSCAN-SWA
MSSNLTALQIQLEILRLIPKTRFITAEEILQKLADIGVQRDIRSVQRQLESLSQQFEIERDMRDKPYGYRWKSNAKGLDLPILNEQQSLVLMLAKQYLNGILPSSIMNSMEAFFQQAEYNLVYDSHKKSGAEWLNKVAIAPTSQPLLPAKINPEIFSQISTALYQNRFLQVHYRSIHGKEHKAQVKPLALVQQGPSSYLVAQYENGDILHLALHRLLKVTVSTMIFERPDFNLKSYVESQKFGFTYGRKIRLTFRINKDIGGFLTETPLSMDQTVKDCGTEYEISATVIKSAMLEWWIAHFGEDYQEIDRTYLDENA
>LR134171|1174888:1181520|1177892_1178387_-|VEB28737.1|DBSCAN-SWA
MHPVIEFYLEQRKSQHNLSLQDMWAMPKRMIGDAYFYIPWLLPVTESSKWNRSVPVFNEEDLAIFIGDEAIQNKYLHSIDIILDYFCLYREDNKIFPKTELSERKVWLRNIGHESKKISRIIRSLNYCGHTELAKSLQQLAIKLGQEKGVIQEETIGIWTNLLK
>LR134171|1174888:1181520|1179159_1179615_-|VEB28739.1|DBSCAN-SWA
MKKIVYIDMDNVMVDFPSGIAKLDEKTKQEYEGRYDEVEGIFSLMEPMPNAISAVHKLMKKYHIYVLSTAPWHNPSAWSDKVKWIQHYFGEEKGSVLYKRLILSHHKNLNQGDYLIDDRTKNGAGKFQGEHVHFGTEQFANKRSLKNDREK
>LR134171|1174888:1181520|1181229_1181520_-|VEB28742.1|DBSCAN-SWA
MATITKLDIIEYLSDKYHLSKQDTKNVVENFLEEIRSSLESGQDVKLSGFGNFELRDKSSRPGRNPKTGDVVPVSARRVVTFKPGQKLRARVEKTK
>LR134171|1174888:1181520|1175682_1175883_-|VEB28734.1|DBSCAN-SWA
MAMKVIMARDPLFEDVKKFVQQQKVASCSMIQRRFMLGFNRAGQILEQLEQAGIISPMKNGQRKVL
>LR134171|1174888:1181520|1180691_1181177_-|VEB28741.1|DBSCAN-SWA
MKVYKSFLIATASLFLFACSSFQNDDYAMNYKGQIGDPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDRFNLRLPRSTVEQANYGKHVRKEDIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRRI
>LR134171|1174888:1181520|1177162_1177879_-|VEB28736.1|DBSCAN-SWA
MVTEEFKKVAVSFAGGDGGNPKSEVWFCGLEWGIGDEASPDDFYKKFSLSPKLIAHSWLEDDFDGSWTTQYNQKLCWFLWYYYNLDWKNGESAEHFVKKYDVLSPQGIGFKLNMLPINFKNRSSIKWNEQFIKMTGFETFDEYREWCVQNRGAFYRQLIDECNPKVIICTGVTEKDNFFKFFTGEAVYETKALKEFNIFYRKYNDTLICVCPFFGGPSGINSYDKMEALVESVKELCK
>LR134171|1174888:1181520|1178465_1179176_-|VEB28738.1|DBSCAN-SWA
MTEKNKPICVVLTGAGISAESGIPTFRAEDGLWAGHKVEEVCTPEALQKNRAKVLDFYNQRRKNAAAAKPNAAHLALVELEKAYDVRIITQNVDDLHERAGSSKVLHLHGELNKARSSFDESYIVDCFGDQKLEDKDPNGHPMRPYIVFFGEMVPMLERAVDIVEQADVVLVIGTSLQVYPANGLVNEAPRKAPIYLIDPNPNTGFVRKQVIAIKEKAGEGVPKVVAELLENTKNS
>LR134171|1174888:1181520|1176103_1177108_+|VEB28735.1|DBSCAN-SWA
MNHQNPIEIYQAQDGTTQVEVRFENDTVWLSLQQMADLFGRDKSVISRHLRNIYTDGELNREATVAKNATVQIEGKRQINRTIEYYNLDVIISVGYRVNSILGTKFRIWATARLKEYLTQGYAINQKRLQQNAHELEQALALIQKTANSAELTLESGRGLVDIVSRYTHTFLWLQQYDEGLLAEPQTQQGGTLPTYAEACSALAELKSQLMAKGEASDLFGRERDNGLSAVLGNLDQSVFGEPAYPSIEAKAAHLLYFVVKNHPFSDGNKRSGAFLFVDFLHRNGRLFDHNGHPVINDTGLAALTLLVAESDPKQKETLIRLIMHMLKHKQDQQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB28733.1|1174888_1175686_-	NAD-dependent deacetylase sirtuin 5	A0A1C3S788	Escherichia_phage	3.9e-05	24.1
VEB28734.1|1175682_1175883_-	DNA translocase FtsK	NA	NA	NA	NA
VEB28735.1|1176103_1177108_+	death-on-curing protein	Q9JMN3	Wolbachia_phage	1.2e-19	37.8
VEB28736.1|1177162_1177879_-	Uncharacterised protein	NA	NA	NA	NA
VEB28737.1|1177892_1178387_-	Opioid growth factor receptor (OGFr) conserved region	NA	NA	NA	NA
VEB28738.1|1178465_1179176_-	deacetylase	R9TG77	Vibrio_phage	3.2e-27	40.1
VEB28739.1|1179159_1179615_-	putative 5'(3')-deoxyribonucleotidase	I6X231	Vibriophage	2.1e-43	63.0
VEB28740.1|1179673_1180627_-	transcriptional regulator	NA	NA	NA	NA
VEB28741.1|1180691_1181177_-	lipoprotein	A0A2H5BM69	Streptomyces_phage	2.3e-16	39.3
VEB28742.1|1181229_1181520_-	integration host factor (IHF), DNA-binding protein subunit alpha	Q2A099	Sodalis_phage	1.5e-10	38.2

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>LR134171|1344603:1353115|DBSCAN-SWA
TATGAATATTTTCAATCCAAACCACGATCGTAAAGCGATTGTCATCTTTTCAGGTGGACAAGACTCCACGACTTGTTTATTCCAAGCTATTGCTGAATACGGCAAAGAAAACGTAGAAGCCATTACCTTTCAATATGGGCAGCGTCATACTATTGAGTTAGAAAAGGCGTGCACCATTGCGCAAGATCTCGGCATTAAACAAACCTTGATTGATACATCTGTTATGAAAGCTATCACGCATAATGCATTAATGGATGAACAAGCGCATATTGAGCAAAAAGAGAATGAATTGCCAAACACTTTTGTTGATGGTCGCAATGCCCTATTTTTACTTTATGCAGCGATTTATGCGAAAGGCCAAGGCATTCAAGATATTATCACTGGCGTATGTGAAACAGATTTCAGCGGTTATCCAGATTGCCGAGATGTGTTTATCAAGTCAATGAATGTCACATTAAATTTAGCTATGGATTATCAATTCAATATCAAAACACCATTAATGTATCTCACTAAAGCCCAAACTTGGCAACTTGCTGATGAATTAGGCGTATTAGATTATGTACAAAAACATACTCACACTTGCTATGAAGGCATCGAAGGTGGATGCGGAAAATGCCCAAGCTGTATTTTACGCAATAAAGGTCTAAAGAAATATTTGACTCAAAAAGGTAGAAAAAATGTTTAAAATTTCCAAAGAATTTAGCTTTGACATGGCACATTTATTAGATGGACATGATGGGAAATGTCAAAATTTACATGGACACACATATAAATTACAAGTTGAAATTTCGGGCGACTTATATAAATCAGGTGCAAAAAAAGCAATGGTCATTGATTTTTCAGATCTAAAGTCTATTGTGAAAAAAGTTATTTTAGATCCGATGGATCACGCCTTTATTTATGATCAAACCAATGAGCGAGAAAGCCAAATTGCCACTCTATTGCAAAAGTTAAACTCAAAAACTTTTGGTGTTCCCTTTAGAACTACGGCAGAAGAAATAGCTCGTTTTATTTTTAATCGTTTAAAACATGATGAACAACTGTCCATATCATCCATTCGTTTATGGGAAACCCCAACTTCATTTTGCGAGTATCAGGAGTAAATGTTGATGGAAAAATATCATGATTTTGAACCGAACTTTAACATAGTCGAAATTTTTGAAAGTCTGCAAGGGGAGGGCTTCAATACGGGAATGCCAAGTGTTTTTGTACGATTTGGTAAATGCAATCTAGACTGTCCTTGGTGTGATACACCTTATAATAATTTTAAACGCTGGTCTGTATCACAAATTCTAGAAAAAGTGCGGTCATTTTCGTCAAAGAATATTATCATCACAGGTGGTGAGCCAACAATTGTACCAAAAATTGAATACTTACTTGAACAATTTAAATCAGATGGCTATTTTCTTGCAATTGAAACCAATGGTCTAAAAGCAATTCCTGCACAAATAGATTATATTGCGACGAGTCCTAAGAGCCTTTATGCTCATAAGTATGAAAAGCGTTGCATTCCATTTGCAAATGAAGTACGTATTGTAATGGACAGTAATATGCCATCATTTTGTGAATTGATCGAGCAAAAAATAAAAGCAAAGAATTACTATCTTTCACCTTGTGAAATTGATGGGAAAATGAATTTACTTGAGACTATCACTTTACTTGGTCAATTGAATCAACGTTCAAATAAACCTAAATGGCAGCTAAGTTTACAAACACATAAATTGATTGGTATTGAGTAATAGAAGGAAATATTATTTTTTGATCAGTATATAATTTAGTATATGACGTTCTCTACTTTAGAGTGATCATAATGAAACTTGGATAGCACACTTCTCCCATTCCTTTGTGCTAACCATTTTTTGGAATTTTGTACCATATCTCACTCTTTCTTATTTGTATTAATTATGAATAACATTGAATTTGAGTAACTTTTTAACCTAAAACTTAATTCGGACAAAATCACCGACTATGCGTAAAATGGCGTGCAAGTAGAAGGAAAAGCAAATGTTTATAAAATCATTACAGGAATCCTAGCAAATCAAGTATTGATTAAGTCATTAAACAACATTCCTATGCTATTATTGTTCATCATGGGTATTTTTGGAAAAATGAGAAACCTTGCATTTTAGGAATGAGAGGTAAACGAATTAAAAGTTTGTTTATAAATAGTATAAAAATAGCTTTCAAAGCATATGGTTTTGATGTTGAGTTTAAGGATATAGGAGAATCCCGCTTAATATTATTCTTAAAATGTTCTACCCTACTTTTGATATACTCACAAATCTTATTGTTTCACAAGATAGATGGGACTATAATAACTGTAAATTTAAACAGATTAAAGATAGTTTATGATGGATATTGCGGAATTACTTGACGGACTCAACGATAAACAACGCGAAGCCGTAGCTGCTCCTCTTGGTAATCACTTAGTGCTAGCTGGTGCAGGCTCGGGCAAAACGCGTGTATTGACGCACCGTATTGCTTGGTTAATTGCGGTCGAAAATATTTCTGAAGGCAGCATTATGGCGGTGACGTTTACCAATAAAGCCGCAGCAGAAATGCGTCATCGTATTCAATCTACCCTTGCCAAACACGCACAACATCAATTAGTTGGTATGTGGATTGGCACCTTCCATAGCATTGCTCATCGTTTGTTGCGAGCTCATCATTTAGATGTGGGATTGCCACAAGATTTCCAAATTTTAGATTCAGAAGATCAACTTCGTTTAATTAAACGATTATTAAAATTACATAATTTTGATGAAAAAGCTTTTCCGCCTAAACAGGCTTGTTGGTACATCAATAACAAAAAAGATGAAGGCTTGCGACCAAATGATATTGAAGATTTTAATGATCGCCAAGAACGTGAATGGATTAAAATTTATCAGATCTATCAAGACACTTGCGATCGCGCAGGGTTGGTCGATTTTGCTGAATTATTAATTCGGGTCTATGAATTATTTGAGAAAAAACCATTAATTTTGCAACGTTATCAACAACGTTTTCAGCATATTTTGGTGGATGAATTTCAAGACACCAATAAAATTCAATATAAGTGGATTAAAATTCTTGCTGGAAAAACAGGCAAAGTCATGATCGTAGGCGATGATGATCAATCTATTTATGGTTGGCGTGGCGCACAAATTGAAAATATCCAAAAATTCTTGAAAGATTTCAAAGCCGAAACAATTCGCCTTGAACAAAACTATCGTTCTACCGCCAATATCCTAAACAGTGCAAATAAATTAATTGCAAACAATAGTGATCGTCTTGGTAAAAATTTATGGACAGAGGGTGAGAAAGGCGATCCTGTGGGCATCTATTCTGCCTTTAATGAATTAGATGAAGCAAAATTTGTCGCTTCACAAATTCAGGATTGGGTGGAACATGGCGGAAAACTTGATGATTGCGCCGTACTTTATCGCAGTAATAGCCAATCACGGGTTATTGAAGAAGCCTTAATTCGCTGTCAAATTCCATACCGTATTTATGGCGGTATGCGTTTCTTCGAACGTCAAGAAATTAAAGATGCGTTAGCCTATCTTCGTTTGATTAATAATCGTCAAGATGATGCGGCTTTTGAGCGTGTAATTAATACGCCAACCCGTGGCATTGGCGACCGCACTTTAGATATATTGCGTAACTTAACACGCGAACGCCAAATTACCTTATGGCAAGCAGTACAAGTCGCAACACAAGAAAATATGTTGGCAGGGCGAGCCTCAACAGCCTTATTACGTTTCCAAGAATTAATTAATTCACTACAACTTGATACCGCAGAAATGCCGCTTTTCGCACAAACTGATTTTGTGATTAAACATTCGGGCTTATATGAAATGTATCAACAAGAAAAAGGCGAAAAAGGCGAAGTGCGTATTGAAAATTTGGAAGAATTAGTTACCGCAACCCGTGAATTTATCAAACCTGATAATGCGGAAGAAATGACCGAACTCACTGCCTTTTTAACGCACGCTTCCTTAGAAGCTGGCGAAGAACAAGCCTCGCCGCATCAATCTTGTGTAGAAATGATGACGTTGCACTCTGCGAAAGGCTTAGAATTTCCTCGTGTATTTATGGTGGGCGTAGAAGAAGGATTATTCCCAAGTTTTCGTTCTTTTGAAGAACCCGGACGTTTAGAAGAAGAGCGTCGTTTAGCTTATGTCGGTATTACTCGCGCACAGAAAAAACTGACCATCTCTTATGCGGAAAGCCGTCGGTTATATGCAAAAGAAGAACGCCATTTACCATCACGTTTTATCGCAGAATTACCGAGAGAATGTATCCAAGAAATTCGTTTACGAGGGACTGTCACGCGTGCAATGAATCTAACAAAAGTCGGTTCATTGTCGAATACCAGTGCGGTCGAAAATGAATGGAAAATGGGTCAAAAAGTTAAACACGAAAAATTTGGTTTCGGCACAGTGATTAATGTGGAAGGATCTGAAAATAACACACGTTTACAAATAGCATTCCAAGCGCAAGGCATTAAATGGTTGATTGCGCATTTGGCAAAATTGGAAAAAGTGCGGTAGAATTCAAGAGTATTATATTTTTTACCGATTAATTTCTTTGAAAAGTGCGGTGAATTTTTACCGCACTTTTATTATCTACGAGTGATGGAATGTTTAAATTTGTATTCAAACGAATCTTAATGGTGATCCCTACTTTTATTGCCATTACTCTTATTACCTTTGCCCTTGTGCATTTTATTCCCGGTGATCCTGTGGAAATTATGATGGGGGAACGTGGCTTAACGGCAGAAGTACATCAACAAATGATGCACCAATTGGGTTTAGATTTACCTCTTTATCAGCAATATTTCCGCTATATTGGCAATGTAATTCAAGGGGATTTCGGTGCATCGTTCCGCACTCAACAACCTGTCCTTACTGAATTTTTTACGCTTTTTCCTGCTACCGCTGAATTAGCTTTTTTTGCGTTATTTTGGTCATTATTAGGTGGAATAATTTTAGGCACGATTGCCGCAGTAAAAAAAGACAGTTGGATTTCTCACACCGTTACAGCTGCATCGCTCACAGGTTATTCTATGCCGATTTTCTGGTGGGGTTTAATTTTAATTTTATATGTTTCGCCACAACTCGGTTTGCCACAAGGTGGGCGTTTAGATAATGAATTTTGGATCGATACGCCGACTGGATTTATGCTCATTGACAGCTGGCTTTCAGGTGTTTCTGGTGCCTTCGAAAATGCGGTGAAATCATTAATTCTTCCTGCCATCGTCTTAGGCACAGTTCCTCTCGCCATTATTACGCGTATGACACGATCTGCGATGTTGGAAGTATTAGGCGAAGATTACATTCGCACGGCTAAAGCAAAAGGTTTAAGCTATACTCGTATTGTTATTGTTCACGCATTGCGTAATGCGTTAATTCCTGTTGTCACTGTGGTGGGATTAATTGTAGGTCAATTGCTTTCTGGTGCAGTTCTCACAGAAACTATTTTCTCTTGGCCGGGGATTGGAAAATGGATTATTGATGCTATTCAAGCCCGTGATTATCCTGTGTTGCAAGGTTCTGTACTGATTATTGCGACGATTATTATTGTGGTGAATTTAACCGTCGATTTACTTTACGGTGTGGTCAATCCGCGTATCCGTCATTAATTGTAGGAGAAATTATGTCTGACACGCCTTTAACTTTCGCGCCAAAAACACCCTTACAAGAATTTTGGTTTTACTTTAAACAAAATCGTGGTGCGCTAATTGGTTTAATTTTTATTTTGATTGTTGCCTTAATCAGCATTCTCGCACCTTATATTGCACCTTTTGATCCAACAGAACAAAATCGTACCGCACTTTTACTTCCCCCTGCTTGGTATGAGGGCGGTAATCCTGCCTATTTACTCGGCACAGACGATATTGGGCGAGATATTCTTTCGCGTATTATTTATGGAACGCGAATTTCCGTCTTTGCGGGATTTATCATCGTATTACTATCTTGCGCCTTTGGTACCAGCCTTGGCTTGATTTCTGGTTATTATGGTGGCGTGCTAGATACAATTATCATTCGCCTAATTGATATTATGCTCGCAATTCCAAACTTACTTTTGACGATTGTAGTCGTCTCTATTTTAGAGCCATCACTCGCCAATGCCACTTTAGCGATCGCCGTGGTATCGATTCCTAGCTATGTGCGTTTAACTCGAGCAGCGATGATGAATGAAAAAAATCGTGATTATGTGACTTCATCTAAAGTGGCAGGGGCAGGTATTTTACGCCTCATGTTTATTGTGATTTTACCAAACTGTTTAGCCCCTTTAATTGTGCAAATGACAATGGGCATTTCCAATGCCATCTTAGAACTCGCAACACTTGGTTTCTTAGGCATTGGTGCAAAACCACCAACACCTGAACTTGGCACAATGCTTTCAGAAGCACGCGGTTTTATGCAAGCGGCAAACTGGTTGGTTACAATTCCTGGCTTAGTGATTTTATCTTTGGTGCTTGCTTTCAACTTAATGGGCGATGGCTTGCGTGATGCCCTTGATCCAAAACTCAAACAATAGGAAAACAGAATGGCATTATTAGACGTAAAAGAACTTTCTGTTCACTTTGGCGATAAAAAAACGCCATTTAAAGCAGTGGATCGTATCAGCTACCAAGTCGCACAAGGCGAAGTGCTTGGCATTGTGGGAGAATCAGGTTCGGGTAAATCTGTGAGTTCTCTCGCAATTATGGGATTAATTGATCATCCTGGACGTGTATCTGCTGAATCCTTGCAATTTGAAAATACTGATTTACTCACTTTAGAGAGTAAAGCTAAACGCCAGCTTATTGGTGCTGATGTTGCGATGATTTTCCAAGATCCGATGACAAGTTTGAATCCTGCTTATACTGTGGGATTCCAAATTATGGAAGCGTTAAAAACTCACGAGGGCGGCACAAAAAAGGCGAGAAAAGACCGCACTTTAGAGCTTTTAAAATTGGTCGGTATTCCTGATCCTGAATCTCGGATTGATGTTTATCCCCATCAGCTGTCTGGTGGAATGAGCCAGCGCGTGATGATTGCGATGGCAATTGCTTGCAGACCTAAATTATTGATTGCTGACGAACCAACCACGGCATTGGACGTGACTATCCAAGCTCAAATTATGGAACTCTTACTTGAATTGCAAAAGAAAGAATGTATGTCCCTAATTTTGATTACTCACGATCTAGCACTTGTGGCTGAAGCGGCAGAGCGAATTATCGTGATGTATGCTGGACAAATCGTTGAAGAAGGCACCGCAAAAGATATTTTCCGCGAGCCAAAACACCCTTACACACAAGCCTTGTTACGTTCATTACCTGAATTTGCAGAGGGAAAATCTCGCTTAGAATCATTACAAGGGGTCGTCCCTGGAAAATACGATCGCCCAACAGGCTGTTTATTAAATCCTCGCTGCCCTTATGCCACCGAATATTGTCGCCAAGTTGAACCTCAATTGCATCATATCGGTTCGCATAAAGTAAAATGCCATACTCCGCTGAACGAGCAAGGCAATCCAGTTGAATATCAAGGAGCTTAATAATGACGAATGAAGTAAAAGAAAATACGCCATTATTAAATGCCATTGGCTTAAAAAAATATTACCCTGTAAAAAAAGGCTTGTTTGCAAAACCACAGCAAGTAAAAGCGTTGGATGGTGTCTCTTTTCAGCTTGAACGAGGTAAAACTTTAGCAGTCGTGGGGGAATCTGGTTGTGGAAAATCAACGCTAGGTCGTTTATTGACAATGATTGAAGAACCAACCAAAGGCGAACTTTATTACAAAGGGCATAATTTTTTAGAAAATGATTCTGAAACAAAAGCACTACGTCGTAAAAAAATTCAAATAGTTTTTCAAAATCCTTACGCATCGTTAAATCCACGCAAAAAGATTGGTTCAATTTTGGAAGAACCATTAATCATCAATACAAAACTTTCCGCCAAAGAACGGCGAGAAAAAGTTTTATCGATGATGGAAAAAGTGGGCTTGCGCGCTGAATTTTATGATCGTTATCCCCACATGTTCTCAGGCGGACAACGCCAACGTATTGCCATCGCTCGTGGTTTAATGTTAGATCCAGATGTTGTCGTTGCCGATGAGCCTGTTTCTGCATTGGATGTTTCCGTGCGTGCGCAAGTACTGAATTTAATGATGGATTTACAAGATGAACTAGGATTGTCTTACGTGTTCATTTCACACGATCTTTCTGTGGTAGAACATATCGCTGATGAAGTGATGGTAATGTATCTAGGTCGTTGTATTGAAAAAGGGACGACAGAACAAATTTTCTCTAATCCTCAGCATCCTTATACCAAAGCGTTACTTTCAGCGACACCACGTTTGTCGCCAAACTTGCGCCGTGAGCGTATTAAGCTGACAGGCGAATTACCAAGCCCGATTAATCCGCCAAAAGGCTGTGCATTTAATCCTCGTTGTTGGAAAGCGACAGAAAAATGTCGTGAAAATCAACCGCACTTGGAACAATATACTGATGGAAAATTAATCGCTTGTTTCCATATTGATTAA

Protein sequences of DBSCAN-SWA_4

>LR134171|1344603:1353115|1346950_1349134_+|VEB28900.1|DBSCAN-SWA
MMDIAELLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMAVTFTNKAAAEMRHRIQSTLAKHAQHQLVGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILDSEDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQIYQDTCDRAGLVDFAELLIRVYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKILAGKTGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANKLIANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRSNSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTRGIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMPLFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLTHASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEERRLAYVGITRAQKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNLTKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSENNTRLQIAFQAQGIKWLIAHLAKLEKVR
>LR134171|1344603:1353115|1345279_1345705_+|VEB28898.1|DBSCAN-SWA
MFKISKEFSFDMAHLLDGHDGKCQNLHGHTYKLQVEISGDLYKSGAKKAMVIDFSDLKSIVKKVILDPMDHAFIYDQTNERESQIATLLQKLNSKTFGVPFRTTAEEIARFIFNRLKHDEQLSISSIRLWETPTSFCEYQE
>LR134171|1344603:1353115|1351136_1352129_+|VEB28903.1|DBSCAN-SWA
MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTDLLTLESKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHEGGTKKARKDRTLELLKLVGIPDPESRIDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAAERIIVMYAGQIVEEGTAKDIFREPKHPYTQALLRSLPEFAEGKSRLESLQGVVPGKYDRPTGCLLNPRCPYATEYCRQVEPQLHHIGSHKVKCHTPLNEQGNPVEYQGA
>LR134171|1344603:1353115|1352131_1353115_+|VEB28904.1|DBSCAN-SWA
MTNEVKENTPLLNAIGLKKYYPVKKGLFAKPQQVKALDGVSFQLERGKTLAVVGESGCGKSTLGRLLTMIEEPTKGELYYKGHNFLENDSETKALRRKKIQIVFQNPYASLNPRKKIGSILEEPLIINTKLSAKERREKVLSMMEKVGLRAEFYDRYPHMFSGGQRQRIAIARGLMLDPDVVVADEPVSALDVSVRAQVLNLMMDLQDELGLSYVFISHDLSVVEHIADEVMVMYLGRCIEKGTTEQIFSNPQHPYTKALLSATPRLSPNLRRERIKLTGELPSPINPPKGCAFNPRCWKATEKCRENQPHLEQYTDGKLIACFHID
>LR134171|1344603:1353115|1345711_1346341_+|VEB28899.1|DBSCAN-SWA
MEKYHDFEPNFNIVEIFESLQGEGFNTGMPSVFVRFGKCNLDCPWCDTPYNNFKRWSVSQILEKVRSFSSKNIIITGGEPTIVPKIEYLLEQFKSDGYFLAIETNGLKAIPAQIDYIATSPKSLYAHKYEKRCIPFANEVRIVMDSNMPSFCELIEQKIKAKNYYLSPCEIDGKMNLLETITLLGQLNQRSNKPKWQLSLQTHKLIGIE
>LR134171|1344603:1353115|1349223_1350225_+|VEB28901.1|DBSCAN-SWA
MFKFVFKRILMVIPTFIAITLITFALVHFIPGDPVEIMMGERGLTAEVHQQMMHQLGLDLPLYQQYFRYIGNVIQGDFGASFRTQQPVLTEFFTLFPATAELAFFALFWSLLGGIILGTIAAVKKDSWISHTVTAASLTGYSMPIFWWGLILILYVSPQLGLPQGGRLDNEFWIDTPTGFMLIDSWLSGVSGAFENAVKSLILPAIVLGTVPLAIITRMTRSAMLEVLGEDYIRTAKAKGLSYTRIVIVHALRNALIPVVTVVGLIVGQLLSGAVLTETIFSWPGIGKWIIDAIQARDYPVLQGSVLIIATIIIVVNLTVDLLYGVVNPRIRH
>LR134171|1344603:1353115|1344603_1345287_+|VEB28897.1|DBSCAN-SWA
MNIFNPNHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHTIELEKACTIAQDLGIKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADELGVLDYVQKHTHTCYEGIEGGCGKCPSCILRNKGLKKYLTQKGRKNV
>LR134171|1344603:1353115|1350239_1351127_+|VEB28902.1|DBSCAN-SWA
MSDTPLTFAPKTPLQEFWFYFKQNRGALIGLIFILIVALISILAPYIAPFDPTEQNRTALLLPPAWYEGGNPAYLLGTDDIGRDILSRIIYGTRISVFAGFIIVLLSCAFGTSLGLISGYYGGVLDTIIIRLIDIMLAIPNLLLTIVVVSILEPSLANATLAIAVVSIPSYVRLTRAAMMNEKNRDYVTSSKVAGAGILRLMFIVILPNCLAPLIVQMTMGISNAILELATLGFLGIGAKPPTPELGTMLSEARGFMQAANWLVTIPGLVILSLVLAFNLMGDGLRDALDPKLKQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB28897.1|1344603_1345287_+	7-cyano-7-deazaguanine synthase	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.5e-53	50.2
VEB28898.1|1345279_1345705_+	6-pyruvoyl-tetrahydropterin synthase	A0A1U9WRB3	Streptococcus_virus	1.3e-20	42.7
VEB28899.1|1345711_1346341_+	organic radical activating protein	S4TZT1	uncultured_phage	8.6e-16	30.3
VEB28900.1|1346950_1349134_+	DNA-dependent ATPase I and helicase II	A7KV33	Bacillus_phage	2.3e-116	37.6
VEB28901.1|1349223_1350225_+	dipeptide transporter	NA	NA	NA	NA
VEB28902.1|1350239_1351127_+	dipeptide transporter	NA	NA	NA	NA
VEB28903.1|1351136_1352129_+	dipeptide transporter	G3M9Y6	Bacillus_virus	2.0e-14	30.8
VEB28904.1|1352131_1353115_+	dipeptide transporter	G9BWD6	Planktothrix_phage	1.8e-20	32.8

Sequences of DBSCAN-SWA_5

Nucleotide sequences of DBSCAN-SWA_5

>LR134171|1484852:1497149|DBSCAN-SWA
TATGTTTAACAAAATTTTTTCGTGGTTTGAAAATCGTTTAAATCCCTATCCAGAAAGCAATCCAACAACACCTAAAAAAGGTTTGTTCCGTTTTATTTGGTCTAGTATTACAGGAATGAAAGGCTGGATTTTTTTGCTCGCAATTTTAACCGTAGGTACAGGTGTAATGGAAGCTGTATTATTCCAATTTATGGGAACGCTTGTAGATTGGTTAGGCACATTTACACCTGAAAGATTATGGCAAGAAAAAAGTCATTTATTAATTGGAATGGCTGCTCTATTACTTATTAGTATTGTGTGGGGATTTTTAGCTTCGGCCGTGCATTTACAAACCTTACAAGGCGTATTTCCAATGCGATTACGTTGGAATTTCCATCGTTTAATGCTTGGACAAAGTTTAAGTTTTTATCAAGACGAATTTGCAGGTAGAGTATCCGCAAAAGTAATGCAAACCGCCCTTGCAGTACGTGACACAGTACTTACACTTGCAGATATGTTCGTTTATGTATTGGTATATTTTATTACCTCTGGCGTAGTGCTAGTGGCATTAGATTCTTGGTTCTTATTACCATTTATTACTTGGATTATACTCTTCGGTTTGATCCTACGAACCCTAATTCCTAAACTATCAAAAACCGCACAACGACAAGCTGATGCTCGTTCTTTAATGACAGGACGCATTACAGATGCTTATTCTAATATTGCTACAGTAAAATTATTTTCTCACGGCTCACGCGAAGCTACTTATGCCAAGCGTTCTATGCAAGATTTTATGGTAACAGTACACGCCCAAATGCGCTTAGCAACATCACTAGATACACTCACTTACGCTACAAATATTCTACTTACGTTAAGTACTGCAATACTTGGTATTATTTTATGGAAAAATGGTCAAGTTGGCGTGGGTGCAATAGCAACGGCAACGGCAATGGCATTACGCGCAAATGGGCTTTCTCGCTGGATTATGTGGGAATCTGCCCGTTTGTTTGAGAATATCGGAACCGTAAACGACGGAATGAATACTTTAACCAAACCTCACACCATTGTGGATAAACCACAAGCGTCACCGTTACAAGTGAAACAAGGGGAAATTAAGTTTAACGATATTACCTTTGCTTACGATCCGACAAAACCATTACTCAATCATTTCAATCTCACTATCAAACCAGGGGAAAAGGTTGGGTTAATCGGTCGTTCTGGTGCAGGAAAATCTACGATTGTGAACTTATTGCTTCGCTTTTATGAAGCACAACAAGGCGAAATTACCATTGATGGACAAAATGTACTCAATGTGCAACAAGAAAGCTTACGTCGCCAAATCGGTTTAGTCACTCAAGACACTTCGTTGCTACATCGTTCTGTACGTGACAATATTATTTATGGTCGCCCAAATGCTACTGATGAAGAAATGGTTTTAGCTGCTGAACGAGCGGAAGCCGCTGATTTCATCCCATTTCTCAGTGATTCTCAAGGTAGAAAAGGCTATGATGCCCATGTGGGAGAACGCGGGGTAAAACTTTCTGGTGGTCAGCGTCAGAGAATTGCCATTGCTCGTGTAATGTTAAAAGACGCACCAATTCTATTGTTAGATGAAGCCACAAGTGCATTGGATTCAGAAGTGGAAGTGGCAATACAAGAAAGTCTCGATAAGATGATGGAAAATAAAACTGTGATTGCCATTGCCCATCGTTTATCCACCATCGCAGCGATGGATCGCCTGATTGTGCTTGATAAAGGACAAATTGTCGAACAAGGTACGCACGCCGAATTACTAGAGCTCAATGGTCTGTACGCTAAACTTTGGAATCATCAAAGTGGCGGATTTTTAAGCGAAAGTGCTGAATAATATTGCGTTTATCATATTTAATTAATTGTACTGTAATCAAACTAATTAAAAAATTAGTCTAATTTAATAGCTAAAGAAAAGTGCGGTGAATTTTTACCGCACTTTTTTGCTAGATATTTAGCGTTTAATTCACGACTTCAGCAGTATATTTCAGCTTGTGAATTGCATCGAATAATTGTTGGTTTGTGACTTTTGGATCTTCCACAACCGTCACTAAACCATCTTTAATAGATGCTTTTGTTGAAATAACGCCATTGATATTACGCAGTTCTTTATTGACTAAGTAAGCACAAAGCTGGCAATTCATTTCCTTTACTTTTAGCACAATTTGTTTGGTTTCATTCGCATGAGCGAAAGAAATTGCAAACAGCGAAAGCAAAAGTGCGGTACATAATTTCTTCATTTTTATTCCTAATTAGCTAATTCTAAAATCCAAGGTAAAATTGTTGGATAGGTTAAGAAAAAAATCATCACGATAAATACAATCCAATATAAAACGATAAGTTTTTTACGGGAAATATATTTGCTACAAATGATTTTTTTGGAAAACATCAACAGCCAAAATCCATAGGCAAAGGCACATAATGAAATGATAAGCATAGGAATGCGCAAATAATCATATTCGCCTAAGCCAATCAACCAAGTGGACGACACACCAAATACTAAATAAATTAATGGTGCGATGCAGCACAAGGTTGATGCCACCGCAGCACTTAGTGCGGTGGCTATGGCAGCCCAAAAGGATTTATTAGAGTTTTTTAGAGACGTAGTCATATTTAAATTCTTTTGGGTCAAAGGAATTTAACGGATCTCCACCTACTTCTGCATATGGATAGCCGAAGTTATTGATTGGAGCCAGTTCTGGTTGTGGATATAAATCGAAGTCACGGGCATGATTAAATCCCACCCAGTTTGCTTCCCAGTTACCAAACAAATATTTTGCTACGGCTTGTGTATCTTTATCTTCAACAGATTTTTTCTCTGCTAAACGCATTTTGGCAACGTCTGCGGAATCAACTGGTACCCATCCAAATCCTGCAAGGTAGAATTCAGCGCGGCAGTGCTGACCGCCACTTACGTTTGCGATGCCTTGTTCATTTGCACTACCGAAGGCACCTTTTGAATATTTGCCCATTTTCTCTGCCGCACCTAAGCGAATACCAAAAATTTCACGAGCAGGGATGCCTGCAGCACGAGCAAGTGCCACAAATACAGAGTTAATATCGGTACATTTACCTTTTAACACGCCAGTGGTAAGAATTTTTTCTACATCGCCGTCGCCACAACCTAATACAGAATTATCACGTTCCATATTTTTTACGATCCAACGGTGAATAAGTTCTGCTTTTTTCAATGGATTAGTTTCTTTACCTACGATTTTGTCAGCAAATTCTTTCACAATGCCATCAGTTTTAATATGTGGAGTAGCTTTTAAGTATTCTTGTACATCCACGGAATACTGAATATCTTTTGGCGGAGTATAATTCTCTAAAGCACCTTTCACCATCGGTTCACGGTCTTTTGTTTCAATGACCATCGTGACTTTTAAATCACGTTTTTGTGCATCTTTATCCCAAGTGGCAAATAAGGTTTTCGCTCCGTATTTATTGTTTTCTGTTACATAGGCATTCATGTAATTACCTTCAAAGTGAATCGATTTCACTTGTTGGTATTCCCCATTAAATGGTAATGGAACCCATAAATTGGTTTGTCCTTGCGAGCCTTTTGGCACAACTAAATCATAGGTTTGCGTGAATTCGTAAAGATGGGCGTCTGTATTGTAGTTTGGAATATTAGTGTTTGCATGAGCTAACGAGCCACATGCAGAAAGCACCGCAACTGCGATAAGTTTCTTCATGAAGAGATCCTCTAGTTAATAATAGTTAAACTTAACATATTAGATAAACTAATACGCCACTATGCTAACGGGTTTTTAAATCCATAGTCAATTTGTTATTCCAAAATTTATTAAAACATCAATCTACTAAAATACCCTATAAATAATATACCTATTAATGATTAATTGATTTGGCTCAAGTAAAACTTCTATACAAAGATTATAATTAACTCGTTTTAGTTATTTTTCAATCTGACTGTGGGGGAACGATATAATGAGTAACTTTAATCAAATAAGTCGCCGAGATTTTGTCAAGGCGTCATCTGCGGGAGCTGCACTGGCAGTTTCAAATCTTACTTTACCTTTCAATGTAATGGCTAAAGAGACACAACGCCTCAATGAAAATAATCAAGAACGTATTGTTTGGAGTGCTTGTACAGTAAACTGTGGTAGCCGTTGTCCATTACGAATGCACGTAAAAGATAACCGAATCACTTATGTGGAAACCGATAATACGGGGACAGAAACATATAATCTTGATCATCAGGTTCGTGCTTGTCTACGTGGACGTTCTATGCGTCGTCGAGTATATAACCCAGACCGTTTAAAATATCCAATGAAACGTATAGGTAAACGCGGAGAAGGCAAATTCAAACGAATCAGTTGGGATGAGGCTTTAACTGAAATTGCAGACGCATTGAAACGCAATATCAAAAAATATGGCAATGAATCAATTTATTTAAACTATGGTACGGGAACACTCGGTGGCACAATGGCTAAATCTTGGCCACCTGCATCCACTATGATCGCTCGTTTTATGAATTGTATTGGTGGATATTTAAACCATTATGGTGATTACAGCACCGCACAAATTGCTGTCGGTTTAGATTATACCTATGGTGGTGGTTGGGCATTGGGAAATGGAATGGCTGACATTGAAAACACCAAATTAATAGTGTTATTCGGTAATAATCCTGCAGAAACTCGTATGAGTGGAGGTGGTTTAACTTATTGTATTGAACAAGCCAAAGCTCGTTCCAATGCCAAAATGATTATTATCGATCCTCGTTATAATGATACTGGTGCAGGGCGTGAAGATGAGTGGATCCCAATTCGTCCAGGCACTGATGCAGCCCTCGTTTCTGCCCTTGCTTATGTAATGATTCAAGAAAATCTCGTGGATCAACCTTTCTTAGATAAATATTGTGTTGGTTATGATGAAAAAACATTACCTGCGGATGCCCCTAAAAATGGTCATTATAAAGCCTATATTTTAGGTTATGGTAATGATGGTATCGCTAAAACCCCAGAATGGGCGGCTAAAATCACAGGTATTCCAGCGGAGAGAATTATTAAACTCGCACGTGAAATTGGCAGCACAAAACCTGCCTTTATTTCCCAAGGTTGGGGGCCTCAACGTCGTAGTAATGGAGAATTAATCTCTCGTGCCATTGCGATGTTGCCAATCTTAACAGGTAATGTTGGAATTCACGGCGGTAACACTGGTGCACGTGAAAGTGCGTATAGCATTCCATTTGTGCGGATGCCAACGCTGAAAAATCCTGTGAAAGCAAGCATTCCAATGTTTTTATGGACAGATGCAATTATTCGTGGCACAGAAATGACCGCACTTACAGATGGTATTCGCGGTGTTGATAAATTATCGTCCCCAATTAAAGTAATTTGGAATTACGCAAGTAACTGTTTGATTAATCAACACGCACAAATCAATCGTACTCACGATATTTTACAAGATGATACGCAATGTGAAATGATCATTACTATTGATAATCATATGACATCTACTGCCAAATACAGTGATATTTTATTACCAGATTGTACAACTTCAGAACAAATGGATTTCGCTTTAGATGCCTTTGTATCCAATATGGCATATGTCATTTTTGCAGATCAAGTGATTAAACCATCTTTTGAATGTAGACCTATTTACGATATGTTAAGTGATTTAGCTGAGAAAATGGGCGTAAAGGAAAAATTTACTGAAGGACGAACACAAGAAGAGTGGTTACGCCATATTTATAAGCAATCTCGAGAAAAATTACCTGAATTACCCACTTTTGAAGAATTTAGACAACAAGGTATTTTTAAAAAAGTTGATCCTAATGGCTTTAAAGTCGCATACAAAGATTTCCGCGATAATCCAGAAGCCCATCCACTTAAAACGCCATCTGGCAAAATTGAAATTTATTCTTCTCGTCTAGCTGAAATAGCAAAAACTTGGAAATTAGCAGAAGATGACGTAATTCATCCCTTACCTATTCACGCCCAAAGTTTTGAGCATTACGGTGATCCATTAATGGAAAAATATCCGTTACAACTAAGTGGTTTTCACTATAAAGCGAGAACCCATTCAACTTATGGCAATGTGGATGTATTAAAAGCAGCTAATCCACAAGAAGTTTGGATGAATCCTATTGATGCAGAACCTCGTAATATTAAAAATGGCGATATGATTCGTATCTTTAATGATCGAGGCGAAGTACATATTAATGTAAAAATTACACCCCGTATTATTCCAGGGGTTGTGGCATTAAGCGAGGGGGCTTGGTATGCACCAGATAAAGATCGTATCGATCATTCAGGTTGCATTAATGTACTTACGACACAACGCCCATCACCGCTTGCGAAAGGTAATCCGCAACATTCTAATTTAGTTCAAGTGGAACGTTTGTAGGGGGATAATTATGGAACAATATGGTTTTTATTTTGATTCTGAACGTTGCACAGGCTGTAAAACTTGTGAATTAGCCTGTAAGGATTACAAAGATCTTGGCACAGAAGTCAATTTTCGTCGTATTTATGAATATACAGGTGGTCAGTGGAATCAACAAGCAGATGGATGCTGGCATCAAAATATATTTGCTTATTATATGTCTATTTCTTGTAATCATTGTGCAGATCCTGCTTGTACAAAAGTTTGCCCAACTGGTGCAATGCACAAGAATGCAGATGGTTTCGTGATCGTCAATGAAGAAATTTGTATCGGTTGTCGTTATTGTCATATGGCGTGTCCTTATGATGCACCGCAATATGATGCACAAAAAGGTCATATGACAAAATGTGATGGATGTTATTCTCGCGTAAAATCAGGTCAAAAACCGATTTGTGTTGATGCCTGCCCACTACGAGCATTGGATTTCGCTCCTATTGATGAACTTCGAGCAAAATATGGCACACAAGCCTCCATCGCACCACTACCACCGGCTGATATCACTCAACCAAATTTAGTGGTAAAACCCAATAAACACGCTCGTTTAAGTGGCGATACAAGTGGGTTCTTAGGAAACCCAAGAGAGGTGTAAGATGAATACAGGATTATATGAACTGCCACTAGTATTTTTTACAGTTTTGGCACAAAGTGCGGTCGGTGCTTGGCTTGTTTTCACATTTGTACTATTAAATGAGAAAAATACAAAAAGTCGCACTTATATTCATAAAGTAATGTTTGTGATTTTGGCTTTGCTAGGTATTGGATTTATTGCTTCCATTATGCATCTTGGCTTACCTATACGTGCATTTAATTCACTTAATCGAGTCGGCTCATCAATGATGAGTAATGAAATTGCCGCTGGTGCAATATTTTTCACATTAGCAGGTTTCTACTGGCTGATTGCAATTTTAGGTAAAATGCCAGTTTCACTTGGAAATGTATGGCGAATTGTGACCGCCCTTATCGGCATACTATTTATGTATGTAATGAATCAGGTTTACCATATTACAAGCATACCAACTTGGAATAATGCATTAACCTCCTGGTCATTCTACCTTACCGTTGTATTAGGTGGATTAACATTGAGCTATGCGTTATTAATCCCTAATAAACAACGTGAATATCAGCTTCAGCATCTGCCAAGTTTATTCGCCATTGGGGTATCATTGGTCGCAATAGTAGCCATATATCAAGGCTTCAATTTACACAATATTCACAGTGCTATTCAAAATGCCGCTGACCTCGTACCAAATTATGCCATAATGACCGTAACTCGCTTATGTTTACTTTCCATTGTAGCTTTCCTCTTATTCCGAGTGAAAAACATAGGACTATTAGGTATTTCCGTTCTATTAACGTTAGTAGCTGAAGGCATCGGTCGCGTATTATTTTATGGATTACATATGACTTACGGTATGGCGATTGGTGGTTAAATTATGTTGAGGCGTATAGCATACGCCTCAATTTTTAGAAACGTTAATTAGTAATATTTAACCAACCCTCATATCCCCATTCACTAATGACAAATTGTTTTCGGAGATACTATGCAAAATACTCTTCAACAAATTTCTATTTATGGGCGTTTACTCGGTGCAGTATTTTACTATGAGCCTAATGATGCACGACTTACTGATATTTTGACATTCTTTCGCCAACCAAATTGGATGCAAGAATGGGAAATTTCATTTGATGTAAAAACACATAAAAAAATTACCGCACTTATTGAAAAAGGGCTGCAACAAAATATCACTGAACAATATCAGTATTTATTTATTGGTCCAAATGAATTACCTACGCCACCTTGGGGATCCGTATATCTTGATCCTGAATGTGTTATTTTTGGTAATTCTCTCTTAGCATTACGCGATTTCTTACAACAACATCAAATCGCATTTCAAACACAACAAGATGAACCAGAAGATCATATTGGCTTAATGCTAATGCTTGCTGCATATTTAGCAGAAAATCGACCGCACTTATTAATCAAATTTCTACGTGAACACTTCTTAACTTGGGCGTATCATTTCCTTGAACAACTAAGCAAAATAGAAAATTCTGATTTTTATCAAGCTCTTGCATTACTTACCATAAAAACTTTACAACAATGGCAAGTAGATTTACATATTAATGTACCAACAGTAAGATTTTATCGATAATGAAAAACGAAGCCTATTATCAGGCTTATTTAAGCCACCATCACATTTCTCGTAGAGGACTATTGCGTCATGTATTTCCAGCTACAAAATCAACAATAGAAAAAACGCAGTCTCGTCCTCCCTTTTCAGCACGAGAAGATTTATTTTCCGCCGTCTGCAATGGTTGTGGGGAATGCGCTTCAGCTTGCCCTAATGGTTTAATTCAACTAAAACAGCAACAAGCCACCCTTGAAATTGACTACGCACCTTGTGATTTGTGTGGTAAATGCGCAGAAGTTTGTCCGACAAATGCACTACATCCTAATTTTCCAGCAGATACATTACTTCGTCCACAATTTTCCTCAGCCTGTTTAATCCTACAAAATCAAACCTGTCCAGACTGCCAAACCGCTTGCCCACAACAAGCAATCTCCAGCACTTTAGAGATTGATAATGAACGTTGCAATGGGTGCGGAGAATGTAAAATTACCTGTTTTGTCGCAGCCATTACACTTAAATAAAAAACCTTAATTTTCCACCGCACTTTCCTTCTAACATTTGACACCCCTAGCCCTTACACCTATTATTCCGTAGTTATTTATTTAAGATTTACGGAACAAAATAATTATGGTGAATAAAACCGCTCAACTTAAACAAGCTCTAGAAAATCGCATTCTCATTTTAGACGGTGCGATGGGGACGATGATCCAAAAATATAAACTGACCTAAGCCGATTTTAGAGGCGAGAAGTTTAAGAAAAGTGCGGTCGATTCTGTCGCAGAATGGTGCACTTGGCCAGTGGGAGAACTTTTAAAACACGCCCTTGTGAAAGGGATTACCACTTGCCAAACATTACCAAGCCCACTAGATGTGATTGAAGGCCCGTTGATGGCTGGCATGGACGTAGTCGGCGATTTATTCGGCGATGGTAAAATGTTCCTGCCGCAAGTGGTGAAATCCGCACGCGTGATGAAACAATCCGTGGCGTATTTAGAGCCGTTTATTAACGCCACCAAACAAAAAGGTTCCAGCAACGCTAAAGTGGTGATTGCAACCGTAAAAGGCGACGTGCACGATATCGGTAAAAACATCGTAAGCGTGGTAATGCAATGTAATAACTTTGAAGTCATTGACTTAGGCGTGATGGTGCCGGCGGACAAGATCATTCAAACTGCTATTGATGAAAAAGCGGATATCATCGCATTAAGTGGCTTTAGTGGTGAATGGGCAGATTACGTGCCACCAACGCCAAAACAAACGGGCATTGTGGAATTTAAAAACGTACCAATTGCCGAGTTGCGCAAATTTATCGACTGGTCGCCATTCTTCCGTATTTGGGGCTTGATGGGCGGCTATCCGGATGCCTTTGATTATCCTGAAGGTGGCAAAGAAGCACGTAAAGTATGGAATGATGCGCAAGTGGTTTTAGATGAATTAGAGCAAAACCACAAACTCAACCCAAGCGGTATTTTAGGCATTTTCCCTGCAGAACGTGTGGACGATGATGTTGTGCTATTCTCTGATGAAGAACGCACGAAAACAATTGGCACCGCTTACGGCTTACGCCAACAAACGGAACGTGGTAAAAACAGCAAGAGCCCATTTAACTTCTGCTTAAGCGACTTTATCGCCGATCGCGAAAGCGGTAAAAAAGACTGGTTCGGCATGTTCGCCGTCTGTGCGGGTGTTGAAGAAATGGATTTAGTAGAAGGCTATAAAGCTGCAGGCGATGACTACAATGCTATCTTACTACAAGCTGTGGGCGACCGCTTAGCTGAAGCAATGGCGGAATACCTACACTTTGAGCTTCGCACCCGCATTTGGGGCTACACGCAAGAAGAATTTGACAACCAAGGGTTAATTAATGAAAATTATGTTGGCATCCGACCTGCACCGGGTTATCCAAGCTGCCCGGAACACACGGAAAAAGCCCTGATTTGGGATTTATTAGAAGTCGAACAATGCATCGGCATGAAACTCACCGAAAGCTACGCCATGTGGCCGGCAGCTTCCGTCTGCGGTTGGTACTTCACCCACCCGGTAAGCAATTATTTCACCTTAGGTCGCATTGATGAAGACCAAGCTCAAGGTTATGCCAAACGTAAAGGTTGGGATGAGAGAGAGATGATGAAATGGTTGGGTGTGGCGATGAAGTAAAATTTATCTAAATGGAAATAATAAAAATGGATTCATCAAGCATTTTAGAATTAGAGCATCATGATGCCAAAGCGTTTTTCTTAAAACATGAAAGTTATTGTAATATTGATTTACCTAGATATTTTTCATTTACAAACTTATTACAAAAAATCTCAGAAGAATTATCAGATAAGAGCCTATTAAACTTTGATCGTAACACGCATAACAATGCTAACCAAAGACCTGATATTGCAAATAATGAGATGGTAAATCATCTCATATATGCCAATAAAGATGGAAAACTCTCTTGGAGACCACTACAAATTATCCATCCATTAGTTTACGTAGATTTAGTTCATAAAATCACAAAAAAAGATAACTGGGAGAAGTTAAAAAAACGCTTCAAAGAATACCAAAACAATCCCCAAATTGAATGTCTTAGTATCCCTGTGAAGTCCAATAGTCAATTAAAGGATAAAGCTAAACAAATCCTGAAATGGTGGGAGTCAGTGGAACAAGAGTCTATTTGCCTTTCACTTGAATATGAATATGTTTTTGATACTGATGTGGCTGATTGTTACAGCTCTATATATACTCATTCCATAGCATGGGCTATAGAAGGTAAAGACATAGCAAAAAAGAATCATAGATTAACGCTATTAGGAAACTCTATAGATAAAAAAATTCAGAACTGCCAATATGGGCAAACTAATGGAATCCCACAGGGCTCTATCTTGATGGATTTTATTGCTGAAATGATATTAGGCTATATCGATATACTATTAAGTGAAGAGTTAAAAAATAAAGGGATTTCAGAATATAAAATATTACGCTATAGAGATGATTATAAAATTTTTGTTAAAAATCATAGCGATGGAGAAAATATATTAAAGTATCTATCAGAAATAATGATGTCTTTTGGATTAAAATTAAACTCTAGTAAAACTAAAGGTAGTCAAGATATAGTTACTCAATCAATAAAAAAAGATAAACTAGCTTGGTTAAAAATTGCTAATAATACAAAAAACTTACAAAAGAAAAGCTTAATTATTAGACAGCATAGTATTGAATACCCTAATTCAGGAAGTCTTAATTCAGCACTAAATGAATTTGATCAAGCTATAGAAAAAGAAAATAAGCAGAAAATTTATTTAAGTTTAGAAGAACTTATTAATTCATTAAACACTTCTAATAATAGTATAGAAAAACTATCATCAAATACAAAACAAGTAATAAGTATTATTGCTGATATTGCATATTGTAATCCTAAAGTAATACCTGTTTGTTGTTCTATTATTAGTAAATTATTTACTAAGTTGGAAGACTCAGAGCCTATAAAGAGGCTCGTTTATAATAAACTAATAAGAATGCCAAATTCTGGCTTTGCCCAAATATGGATGCAAAGAATGCTAAAATCTGATCTAAATAATTTTAATTTCTCAGAAAAAATGTGTAATCTGTATAAGGGAGAAATTTCTTTATGGAATAATGATTGGATAATTTGTTCAAATATGTTAAGTATCTTAAAAGACACTCCCGTATTTCAACAGGATGAATTTTCTCAATTAAGTAATACTATGTCTAATGACGAAGTCTATATTTTTGATTATTAA

Protein sequences of DBSCAN-SWA_5

>LR134171|1484852:1497149|1487445_1488555_-|VEB29033.1|DBSCAN-SWA
MKKLIAVAVLSACGSLAHANTNIPNYNTDAHLYEFTQTYDLVVPKGSQGQTNLWVPLPFNGEYQQVKSIHFEGNYMNAYVTENNKYGAKTLFATWDKDAQKRDLKVTMVIETKDREPMVKGALENYTPPKDIQYSVDVQEYLKATPHIKTDGIVKEFADKIVGKETNPLKKAELIHRWIVKNMERDNSVLGCGDGDVEKILTTGVLKGKCTDINSVFVALARAAGIPAREIFGIRLGAAEKMGKYSKGAFGSANEQGIANVSGGQHCRAEFYLAGFGWVPVDSADVAKMRLAEKKSVEDKDTQAVAKYLFGNWEANWVGFNHARDFDLYPQPELAPINNFGYPYAEVGGDPLNSFDPKEFKYDYVSKKL
>LR134171|1484852:1497149|1492809_1493421_+|VEB29037.1|DBSCAN-SWA
MQNTLQQISIYGRLLGAVFYYEPNDARLTDILTFFRQPNWMQEWEISFDVKTHKKITALIEKGLQQNITEQYQYLFIGPNELPTPPWGSVYLDPECVIFGNSLLALRDFLQQHQIAFQTQQDEPEDHIGLMLMLAAYLAENRPHLLIKFLREHFLTWAYHFLEQLSKIENSDFYQALALLTIKTLQQWQVDLHINVPTVRFYR
>LR134171|1484852:1497149|1491858_1492698_+|VEB29036.1|DBSCAN-SWA
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGSSMMSNEIAAGAIFFTLAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLGGLTLSYALLIPNKQREYQLQHLPSLFAIGVSLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLFRVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMAIGG
>LR134171|1484852:1497149|1494027_1494129_+|VEB29039.1|DBSCAN-SWA
MVNKTAQLKQALENRILILDGAMGTMIQKYKLT
>LR134171|1484852:1497149|1488808_1491229_+|VEB29034.1|DBSCAN-SWA
MSNFNQISRRDFVKASSAGAALAVSNLTLPFNVMAKETQRLNENNQERIVWSACTVNCGSRCPLRMHVKDNRITYVETDNTGTETYNLDHQVRACLRGRSMRRRVYNPDRLKYPMKRIGKRGEGKFKRISWDEALTEIADALKRNIKKYGNESIYLNYGTGTLGGTMAKSWPPASTMIARFMNCIGGYLNHYGDYSTAQIAVGLDYTYGGGWALGNGMADIENTKLIVLFGNNPAETRMSGGGLTYCIEQAKARSNAKMIIIDPRYNDTGAGREDEWIPIRPGTDAALVSALAYVMIQENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGYGNDGIAKTPEWAAKITGIPAERIIKLAREIGSTKPAFISQGWGPQRRSNGELISRAIAMLPILTGNVGIHGGNTGARESAYSIPFVRMPTLKNPVKASIPMFLWTDAIIRGTEMTALTDGIRGVDKLSSPIKVIWNYASNCLINQHAQINRTHDILQDDTQCEMIITIDNHMTSTAKYSDILLPDCTTSEQMDFALDAFVSNMAYVIFADQVIKPSFECRPIYDMLSDLAEKMGVKEKFTEGRTQEEWLRHIYKQSREKLPELPTFEEFRQQGIFKKVDPNGFKVAYKDFRDNPEAHPLKTPSGKIEIYSSRLAEIAKTWKLAEDDVIHPLPIHAQSFEHYGDPLMEKYPLQLSGFHYKARTHSTYGNVDVLKAANPQEVWMNPIDAEPRNIKNGDMIRIFNDRGEVHINVKITPRIIPGVVALSEGAWYAPDKDRIDHSGCINVLTTQRPSPLAKGNPQHSNLVQVERL
>LR134171|1484852:1497149|1484852_1486697_+|VEB29030.1|DBSCAN-SWA
MFNKIFSWFENRLNPYPESNPTTPKKGLFRFIWSSITGMKGWIFLLAILTVGTGVMEAVLFQFMGTLVDWLGTFTPERLWQEKSHLLIGMAALLLISIVWGFLASAVHLQTLQGVFPMRLRWNFHRLMLGQSLSFYQDEFAGRVSAKVMQTALAVRDTVLTLADMFVYVLVYFITSGVVLVALDSWFLLPFITWIILFGLILRTLIPKLSKTAQRQADARSLMTGRITDAYSNIATVKLFSHGSREATYAKRSMQDFMVTVHAQMRLATSLDTLTYATNILLTLSTAILGIILWKNGQVGVGAIATATAMALRANGLSRWIMWESARLFENIGTVNDGMNTLTKPHTIVDKPQASPLQVKQGEIKFNDITFAYDPTKPLLNHFNLTIKPGEKVGLIGRSGAGKSTIVNLLLRFYEAQQGEITIDGQNVLNVQQESLRRQIGLVTQDTSLLHRSVRDNIIYGRPNATDEEMVLAAERAEAADFIPFLSDSQGRKGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLELNGLYAKLWNHQSGGFLSESAE
>LR134171|1484852:1497149|1487108_1487471_-|VEB29032.1|DBSCAN-SWA
MTTSLKNSNKSFWAAIATALSAAVASTLCCIAPLIYLVFGVSSTWLIGLGEYDYLRIPMLIISLCAFAYGFWLLMFSKKIICSKYISRKKLIVLYWIVFIVMIFFLTYPTILPWILELAN
>LR134171|1484852:1497149|1494198_1495557_+|VEB29040.1|DBSCAN-SWA
MGELLKHALVKGITTCQTLPSPLDVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSARVMKQSVAYLEPFINATKQKGSSNAKVVIATVKGDVHDIGKNIVSVVMQCNNFEVIDLGVMVPADKIIQTAIDEKADIIALSGFSGEWADYVPPTPKQTGIVEFKNVPIAELRKFIDWSPFFRIWGLMGGYPDAFDYPEGGKEARKVWNDAQVVLDELEQNHKLNPSGILGIFPAERVDDDVVLFSDEERTKTIGTAYGLRQQTERGKNSKSPFNFCLSDFIADRESGKKDWFGMFAVCAGVEEMDLVEGYKAAGDDYNAILLQAVGDRLAEAMAEYLHFELRTRIWGYTQEEFDNQGLINENYVGIRPAPGYPSCPEHTEKALIWDLLEVEQCIGMKLTESYAMWPAASVCGWYFTHPVSNYFTLGRIDEDQAQGYAKRKGWDEREMMKWLGVAMK
>LR134171|1484852:1497149|1495583_1497149_+|VEB29041.1|DBSCAN-SWA
MDSSSILELEHHDAKAFFLKHESYCNIDLPRYFSFTNLLQKISEELSDKSLLNFDRNTHNNANQRPDIANNEMVNHLIYANKDGKLSWRPLQIIHPLVYVDLVHKITKKDNWEKLKKRFKEYQNNPQIECLSIPVKSNSQLKDKAKQILKWWESVEQESICLSLEYEYVFDTDVADCYSSIYTHSIAWAIEGKDIAKKNHRLTLLGNSIDKKIQNCQYGQTNGIPQGSILMDFIAEMILGYIDILLSEELKNKGISEYKILRYRDDYKIFVKNHSDGENILKYLSEIMMSFGLKLNSSKTKGSQDIVTQSIKKDKLAWLKIANNTKNLQKKSLIIRQHSIEYPNSGSLNSALNEFDQAIEKENKQKIYLSLEELINSLNTSNNSIEKLSSNTKQVISIIADIAYCNPKVIPVCCSIISKLFTKLEDSEPIKRLVYNKLIRMPNSGFAQIWMQRMLKSDLNNFNFSEKMCNLYKGEISLWNNDWIICSNMLSILKDTPVFQQDEFSQLSNTMSNDEVYIFDY
>LR134171|1484852:1497149|1486821_1487100_-|VEB29031.1|DBSCAN-SWA
MKKLCTALLLSLFAISFAHANETKQIVLKVKEMNCQLCAYLVNKELRNINGVISTKASIKDGLVTVVEDPKVTNQQLFDAIHKLKYTAEVVN
>LR134171|1484852:1497149|1491239_1491857_+|VEB29035.1|DBSCAN-SWA
MEQYGFYFDSERCTGCKTCELACKDYKDLGTEVNFRRIYEYTGGQWNQQADGCWHQNIFAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQKGHMTKCDGCYSRVKSGQKPICVDACPLRALDFAPIDELRAKYGTQASIAPLPPADITQPNLVVKPNKHARLSGDTSGFLGNPREV
>LR134171|1484852:1497149|1493420_1493921_+|VEB29038.1|DBSCAN-SWA
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEIDYAPCDLCGKCAEVCPTNALHPNFPADTLLRPQFSSACLILQNQTCPDCQTACPQQAISSTLEIDNERCNGCGECKITCFVAAITLK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB29030.1|1484852_1486697_+	abc transporter atp-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	4.8e-22	29.3
VEB29031.1|1486821_1487100_-	copper chaperone MerP-like protein	NA	NA	NA	NA
VEB29032.1|1487108_1487471_-	putative mercuric transport protein MerT	NA	NA	NA	NA
VEB29033.1|1487445_1488555_-	transglutaminase domain-containing protein	NA	NA	NA	NA
VEB29034.1|1488808_1491229_+	dimethyl sulfoxide reductase, anaerobic subunit A	A0A077SK27	Escherichia_phage	8.2e-224	50.4
VEB29035.1|1491239_1491857_+	oxidoreductase, Fe-S subunit	A0A077SL61	Escherichia_phage	5.8e-73	57.8
VEB29036.1|1491858_1492698_+	oxidoreductase, membrane subunit	A0A077SK59	Escherichia_phage	7.2e-18	31.4
VEB29037.1|1492809_1493421_+	twin-argninine leader-binding protein for DmsA and TorA	A0A077SLS7	Escherichia_phage	3.0e-21	32.5
VEB29038.1|1493420_1493921_+	ferredoxin	A0A077SLP0	Escherichia_phage	3.2e-13	32.0
VEB29039.1|1494027_1494129_+	homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent	NA	NA	NA	NA
VEB29040.1|1494198_1495557_+	homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent	NA	NA	NA	NA
VEB29041.1|1495583_1497149_+	Reverse transcriptase (RNA-dependent DNA polymerase)	Q2P9X6	Enterobacteria_phage	1.5e-72	33.3