CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134189	Providencia rustigianii strain NCTC6933 genome assembly, chromosome: 1	2 crisprs	WYL,DEDDh,DinG,RT,cas3,csa3	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134189_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134189_2

3491248-3491348

Orphan

Consensus_repeat	Method
TAGCCAACAACGCCACGGCGTGAAGTATGACGAGATTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134189_2

>merge|LR134189|2|3491248-3491348|CRISPRCasFinder
TAGCCAACAACGCCACGGCGTGAAGTATGACGAGATTAAGTATGTGACTCGGGTTAGCGAGGCTAGCCAACAACGCCACGGCGTGAAGTATGACGAGATTA

>LR134189|2|2|3491248-3491348|CRISPRCasFinder
TAGCCAACAACGCCACGGCGTGAAGTATGACGAGATTA	AGTATGTGACTCGGGTTAGCGAGGC
TAGCCAACAACGCCACGGCGTGAAGTATGACGAGATTA

Protein	Signature genes	Signature genes Name	Protein_function
LR134189.1\|VEB75595.1\|3496337_3498473_-\|Possible-hemagglutinin-(DUF638)	unknown	unknown	gnl\|CDD\|379124
LR134189.1\|VEB75551.1\|3483230_3484298_+\|Maltodextrin-phosphorylase	unknown	unknown	gnl\|CDD\|376320
LR134189.1\|VEB75579.1\|3493998_3494340_+\|hydrogenase-nickel-incorporation-protein-HybF	unknown	unknown	gnl\|CDD\|183485
LR134189.1\|VEB75568.1\|3489253_3490933_+\|Formate-dehydrogenase-H	unknown	unknown	gnl\|CDD\|130652
LR134189.1\|VEB75585.1\|3494759_3495443_-\|Carbonic-anhydrase-2	unknown	unknown	gnl\|CDD\|182460
LR134189.1\|VEB75540.1\|3480384_3481053_+\|Glycogen-synthase	unknown	unknown	gnl\|CDD\|234809
LR134189.1\|VEB75598.1\|3498891_3499299_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134189.1\|VEB75588.1\|3495667_3495898_+\|HSP20-like-domain-of-uncharacterised-function-(DUF1813)	unknown	unknown	gnl\|CDD\|370150
LR134189.1\|VEB75543.1\|3481039_3481843_+\|Glycogen-synthase	unknown	unknown	gnl\|CDD\|234809
LR134189.1\|VEB75577.1\|3493439_3493988_+\|Electron-transport-protein-hydN	unknown	unknown	gnl\|CDD\|182382
LR134189.1\|VEB75574.1\|3492379_3492940_-\|Formate-hydrogenlyase-transcriptional-activator	unknown	unknown	gnl\|CDD\|237965
LR134189.1\|VEB75559.1\|3485450_3486014_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134189.1\|VEB75546.1\|3481864_3483253_+\|Maltodextrin-phosphorylase	unknown	unknown	gnl\|CDD\|184948
LR134189.1\|VEB75565.1\|3486753_3488478_-\|2-acyl-glycerophospho-ethanolamine-acyltransferase	unknown	unknown	gnl\|CDD\|153248
LR134189.1\|VEB75601.1\|3499428_3502758_-\|Hemolysin-precursor	unknown	unknown	gnl\|CDD\|379124
LR134189.1\|VEB75582.1\|3494358_3494631_+\|Hydrogenase-isoenzymes-formation-protein-hypC	unknown	unknown	gnl\|CDD\|182438
LR134189.1\|VEB75557.1\|3485116_3485299_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134189.1\|VEB75562.1\|3486108_3486492_-\|Predicted-enzyme-related-to-lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319925
LR134189.1\|VEB75592.1\|3495967_3496333_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134189.1\|VEB75554.1\|3484370_3485054_-\|Uncharacterised-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
LR134189.1\|VEB75595.1\|3496337_3498473_-\|Possible-hemagglutinin-(DUF638)	gnl\|CDD\|379124	pfam13332, Fil_haemagg_2, Haemagluttinin repeat.	1.21149e-16
LR134189.1\|VEB75551.1\|3483230_3484298_+\|Maltodextrin-phosphorylase	gnl\|CDD\|376320	pfam00343, Phosphorylase, Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.	0
LR134189.1\|VEB75568.1\|3489253_3490933_+\|Formate-dehydrogenase-H	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
LR134189.1\|VEB75579.1\|3493998_3494340_+\|hydrogenase-nickel-incorporation-protein-HybF	gnl\|CDD\|183485	PRK12380, PRK12380, hydrogenase/urease nickel incorporation protein.	9.22053e-43
LR134189.1\|VEB75585.1\|3494759_3495443_-\|Carbonic-anhydrase-2	gnl\|CDD\|182460	PRK10437, PRK10437, carbonic anhydrase; Provisional.	5.89114e-127
LR134189.1\|VEB75540.1\|3480384_3481053_+\|Glycogen-synthase	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	1.14585e-74
LR134189.1\|VEB75588.1\|3495667_3495898_+\|HSP20-like-domain-of-uncharacterised-function-(DUF1813)	gnl\|CDD\|370150	pfam08845, SymE_toxin, Toxin SymE, type I toxin-antitoxin system. SymE (SOS-induced yjiW gene with similarity to MazE ) is an SOS-induced toxin. It inhibits cell growth, decreases protein synthesis and increases RNA degradation. It may play a role in the recycling of RNAs damaged under SOS response-inducing conditions. It is predicted to have an AbrB fold, similar to that of the antitoxin MazE. Its translation is repressed by the antisense RNA SymR, which acts as an antitoxin.	4.19387e-15
LR134189.1\|VEB75543.1\|3481039_3481843_+\|Glycogen-synthase	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	4.45816e-125
LR134189.1\|VEB75582.1\|3494358_3494631_+\|Hydrogenase-isoenzymes-formation-protein-hypC	gnl\|CDD\|182438	PRK10413, PRK10413, hydrogenase maturation factor HybG.	3.39043e-37
LR134189.1\|VEB75574.1\|3492379_3492940_-\|Formate-hydrogenlyase-transcriptional-activator	gnl\|CDD\|237965	PRK15429, PRK15429, formate hydrogenlyase transcriptional activator FlhA.	2.44394e-20
LR134189.1\|VEB75546.1\|3481864_3483253_+\|Maltodextrin-phosphorylase	gnl\|CDD\|184948	PRK14986, PRK14986, glycogen phosphorylase; Provisional.	0
LR134189.1\|VEB75565.1\|3486753_3488478_-\|2-acyl-glycerophospho-ethanolamine-acyltransferase	gnl\|CDD\|153248	cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.	3.28174e-71
LR134189.1\|VEB75601.1\|3499428_3502758_-\|Hemolysin-precursor	gnl\|CDD\|379124	pfam13332, Fil_haemagg_2, Haemagluttinin repeat.	3.72148e-36
LR134189.1\|VEB75577.1\|3493439_3493988_+\|Electron-transport-protein-hydN	gnl\|CDD\|182382	PRK10330, PRK10330, electron transport protein HydN.	1.13832e-83
LR134189.1\|VEB75562.1\|3486108_3486492_-\|Predicted-enzyme-related-to-lactoylglutathione-lyase	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.60054e-39

>LR134189.1|VEB75568.1|3489253_3490933_+|Formate-dehydrogenase-H
MSNSIVEIEDTQCIFVFGYNAADSHPIVARRILKAKEKGAQIIVCDPRYIETARIADIHLPLKNGSNIALLNAFAHVIIEENLYDHAFIEAHTDKFDEYRGLVAPYTPESVEEITGIKAADIRKTARMYAKAETATILWGMGVTQFYQGVETVQSLTSLALLTGNLGKAHVGVGPVRGQNNVQGACDMGALPNTLPGYQYVSDNAALEKFAKFWGIEKMPDENGIPLSEVPHFIDEGVLKAHYVMGEDPLQTEPDLATIRRTFDKLELLIVQDIFMTKTASIADVIFPATSWGEHEGVYTAADRGFQRFYKAVEPVGDVKTDWEIISLMSTAMGYPMHYNNTKEIWDELRELCPIYFGATYEKMAGLAYIQWPCRTLESEGTEYLYDGGNFDTPNGRGQFFTCDWRPPIDQVSEEYPMVLATVREVGHYSCRSMTGNCKALAALADEPGFVQINTADAKALGIKDQELVWVCSRQGKVITRANISDRPNKGAVYMTYQWWIGACNELVAENLSPITKTPEYKYCAVRVEPIADQPKAEHYVVQEYTAIKRRLREAAEGV
>LR134189.1|VEB75565.1|3486753_3488478_-|2-acyl-glycerophospho-ethanolamine-acyltransferase
MFSVDALLEHAFPQQTLPAWKRNLLKRLLHEKDFQQLAKDYPHLKGLDLIEQVFNDLNVRCELADGDLENIPSHGPLILVANHPIGSLDGLAILRAVATVRPDVKIVANQMLSYLEPLQSLFIPVDNVGNRTNRQQVVGMQSHLDNQGALIVFPAGEVSRWGAKGIRDGHWRTGFLRLAAKSRASIVPIHVQARNSLLFYISSIVYKPLSALLLMNEMFKQRNKRIKLHIGGRIPFSHWYDGRTNDHELAERFRRHVYLLGKGKTGLFTSEAPIALPEDRLELKKALVGCEKLGVTPDGKTIFLYQRQQEVRSPILRELGRLREIAFRAVGEGSGKRRDLDSYDDDYYHLILWDEDDLEIVGAYRFIPTEQQIAKKGLDGIYSNSLFHYNQDMMPILAQGIELGRSFIQPAYWGKRGLEYLWQGIGAYVAKYPQYRYLFGPVSISGSMPVAARDLLIAFYRLYFSSELSMARSRQPYPASLPQVLAQFDGDNYQEDLVKLKSLLSNIGCSIPTLYKQYTELCEPGGVQFIDFGTDPAFNDCIDGLVLVDMSRLKPHRYQRYIAAHLENNHQDNQ
>LR134189.1|VEB75562.1|3486108_3486492_-|Predicted-enzyme-related-to-lactoylglutathione-lyase
MKFKYAILYVNDVAKTLDFYHQAFGMKCAFLHESGDYGELDTGSTTISFSSLALMNQLGKGAISPNPQAPVFELAFETDEVEKALNQAVLAGAKLVQSAEIMPWGQTTAYVHDINGFLIEICSPVSA
>LR134189.1|VEB75559.1|3485450_3486014_-|Uncharacterised-protein
MQGMKPETAELYNEIMPAITELAKLLNPNSQENIATDIASFEEELKELIDEDEEGFVDSVENEDLGFIMADLVVRSNMGNSFWIDWKDSESAIGFLKNALDIADIDIQLDFGVDNPQNSLRPDQIFVRANQQLQALSYYLLGLDSGNDAYHEILIPADIFEPFMSIMEQFNVMVDLNDEEVDYSEYE
>LR134189.1|VEB75557.1|3485116_3485299_-|Uncharacterised-protein
MSKYEIRPLSESRKADIVRTVLSAPAKTQGASISSFSEKSSSGETVNGMLNRAFRAATKR
>LR134189.1|VEB75554.1|3484370_3485054_-|Uncharacterised-protein
MSKRWVYRELVKGQDDTQGFLAYSLYKFEKNEFAEGLRVNGMDEESIVTELDTFHRQTVNTPARIEGYREKAKIIIANIFDQLEVQIRYGYEVQLDGANEQANKIERLTNEIDQLKSAHEQELIEAREAAILHFYRTVAIQYGNKQNRFLRVMQWLWNGFAGVFAAILFAVLIYGLCTLFLPKQARDDVVNGAINNIKNTLFQQPNVILNDGIDHIKHINPPDLHGK
>LR134189.1|VEB75551.1|3483230_3484298_+|Maltodextrin-phosphorylase
MLPERFCNITNGITPRRWLALCNKPLASLIDETIGTGWREDLTRLSQLQQRTDFPLFIERLKTCKLENKVALADYIAQNLNMIVNPHALFDVQIKRIHEYKRQLLNILQVIGRYNRMLQYPEKNWVSRVVIFSGKAASSYVNAKMIIRLINDVAQVINHDARLKNRLKVIFIPNYSVSLAQLIIPATDLSEQISLAGTEASGTGNMKFALNGALTIGTLDGANIEIREHVGKENMFIFGHTAEEVEALRSKGYDPRKIYEEHEDLHQVLNSLVSGVFSPDDPNRYYPLYDSLINFGDYYQLLADYHAYVQAQDTVDKLYQDPNLWAQKALCNIANMGYFSSDRTIGEYMEKIWGI
>LR134189.1|VEB75546.1|3481864_3483253_+|Maltodextrin-phosphorylase
MNPPFHIQSQEQRIDNLVDAIQTKLKFMVGKDPIIATSHDWLNAISYAIRDLTVDRWLRGIRRSLSQSDRAIAYLSMEYLIGRTLSNTLLNLGMYEDVSAALEKMGFSLDDVVQEEDDPGLGNGGLGRLAACFLDSLATLKIPSVGFGIRYEYGMFQQNIIDGQQVESTDRWLQYGNAWEFPRYNLSYKVRFAGRIQQEGKIVRWIETEEVLARAYDQIIMGYGCDATNTLRLWSAHATNEMNINKFNQGEYSAAVEDKNFSENVSRVLYPNDSTESGKILRLGQEYFLVSATLQNILDVHSRVHGTLTNLAEKVAIHLNDTHPVLAIPELMRLLIDEHEYAWEAAWQLCGKIFSYTNHTLMSEALERWSVDLLGRLLPRHLQIIFEINEHFLNQIKQRYPNNSELLTRLSLIDESHGRYVRMAWLAVVGSYKVNGVSQLHSELMIQEIFCRFCESATRAFL
>LR134189.1|VEB75543.1|3481039_3481843_+|Glycogen-synthase
MTTPEYGNGLADLLKQRQSQHRLVGILNGVDYQIWEPQIDPLIPHNYARQNMLGKGICKMTHQRESGLSVTDKVPLFVVISRLSTQKGLDLLLEVVPELLRQGGQLSVLGSGDHDLQAAFELLALHHPKQVSVVIGYDEPHAHKLIAAADVIVVPSRYEPCGLTQLYGLKYGALPLVRHTGGLADTVCDCSLENLADRSATGFVFHDYHGYRSQHGKTTELNDAVRRVFALWNEPTRWKRVRRQGMKMDFSWQISAKKYLDLYQNLL
>LR134189.1|VEB75540.1|3480384_3481053_+|Glycogen-synthase
MRILHACSELFPLLKTGGLADVLGALPQAQIAEGADVRLVLPGFPALLDAIQHTLVGQVFDTFAGQVALRFGTCDGVGIYLIDAPHLYQRAGSPYHNDELHDYADNYLRFALLGWIACELACGLDPQWRAEIVHAHDWHAGLTAAYLAARGYPAPCVFTVHNLAYQGLFSPKHFSVLQLPRAFFLPRRLRVLWANFLPQSGAVLRQQNYLCQSNLRERSDNP
>LR134189.1|VEB75574.1|3492379_3492940_-|Formate-hydrogenlyase-transcriptional-activator
MSKPETTEHIRHERDQFRILVDITNSVLSHLEMDGLVAEVSREIYRFFGISQISVALCDNYSSAVYLCYSSHYQRSKPVKKSQYHLNELHSDLATVLDDNKPLRLTLDPKTQDPLYQHLCAEGMAETLLLPLAFNHKPLGYWYYPMKMIIFLPRIIVTYSSKLPRVLQSQWIMPQLTVKLRALKTA
>LR134189.1|VEB75577.1|3493439_3493988_+|Electron-transport-protein-hydN
MNRFIIADPKKCIGCHTCEVACVVSHQEQETGIATVVKDEFFPRIHVLKGYTVSTAVICRQCEDAPCANVCPNGAISRKDDFVYVDQAKCIGCKTCVIACPYGTMEVISRPVEQQVTALNTIPQYRAEAHKCDLCHTREGGPACVEVCPTEALIVVDRNKMDEIIKERRRRAAFEMPADILS
>LR134189.1|VEB75579.1|3493998_3494340_+|hydrogenase-nickel-incorporation-protein-HybF
MHEVALCQNAFEIIEQHAKRNRARRVTGVWLELSAVSCVEESAVHFCFDIICRDTLAQGAALHILIAPAQAQCRDCQHQVKITQFGAGCPHCGSQNLIVDSSSTMQVKQIEIE
>LR134189.1|VEB75582.1|3494358_3494631_+|Hydrogenase-isoenzymes-formation-protein-hypC
MCLGIPGKVITVGKTPMDNAQVDVCGVKRDVNIALVCEGDTESMVGKWVLVHVGFAMSILDEEEARDTLEALMAMEEVEEDVGYFLRGNA
>LR134189.1|VEB75585.1|3494759_3495443_-|Carbonic-anhydrase-2
MAMDRIKELFVNNREWATSIKEQDPDFFKALSKDQQPKFLWIGCSDSRVPSEKLMKVGPGELFVHRNIANLVIHTDLNCLSAIQYAIDVLKVEHIIICGHYGCGGIEAAIENDELGLIDNWLLHIRDIWFKHSRMLGELKPTERINRLCELNVVEQVYNLGHSTVLQSAWKRGQDIMVHGWIYGITDGYLIDLDITADSRAKLELCYREAIAALTTKTPFKMGCSAE
>LR134189.1|VEB75588.1|3495667_3495898_+|HSP20-like-domain-of-uncharacterised-function-(DUF1813)
MAKRDCSVKTPTAKEEVLKTRHYTVGYTPNRGKPNPNPQLTFSGKWLSELGFTVGRQFTLTRQAGQLIIRLAEGDS
>LR134189.1|VEB75592.1|3495967_3496333_-|Uncharacterised-protein
MQELLTNLDNNSLIDIQLDGFKYDLESLSLILSRPDESFTLSFEWVYSFRVTGEGDLLKMQEYFNGQMTTGVYKVENSSYLKWFHEQSENIHDDVIEHYLIVTIDDVIEVITSAEPSIQTM
>LR134189.1|VEB75595.1|3496337_3498473_-|Possible-hemagglutinin-(DUF638)
MGVNYGTGGFSVNANVNQGKGFEKGNSQFYTDTDVTAGKQLTLESGKDTTLTGAQLKGETVKATVGGDLTLSSQQTTDKYDSKQTSMSAGGSVSQAGSVNGSINASKTEMHSDYQSVDKQTGIQAGKGGFDITVDKQTQLDGAVIASTADKDKNKLDTGTLGFGDIKNKADYKVDSQSGGFSTGGASVGDQFMTNAASSLLTNVNGSGSASNTTHSAVSEGEIVIRDKDNQQQNVADLSRDTDNAHEKLNTIFDKEKEQKRIEKVQLIGEIGQQITDIAVTQIQIKVEQEFKPTVAEREAAVKLLSEKGLPSDGSAVDSYLKQQAVNASGWGVGGDNRRIVEAGTALAQGLAGGDVNKAIANASAPYIANEIAKNIGEENKAGRLTAHAIANVALALAKGENAGAQSLGAFTGEAVGMLSEKLYGKDPSLLSESEKATVSAFASLAAGIAGGLVGGDTSTAANAAQAGKTTVENNSLSVVKEVVVKGLEKGYSACIKNTSCRNEIAKLGVNFGLTNDQIKNAREAAIAARNGDTTAMEKLSPQEVAYIDEQIISGKGLAREMFGSQTWGDRIALSENGANDSESKPSSGQNNVVGSASSGSPNGIEPPNDDKQKNESKNKETTVDDLIATSQEGRKTTGRAKQYERPGGMESANRDFDALSPTNVREIPSGRVGKLPDGSTVIVRTKSSDGRPTLEIQHVKNKQTKFRYGE
>LR134189.1|VEB75598.1|3498891_3499299_-|Uncharacterised-protein
MAKKSLLEIAVLAKNGFLSSITLVIINPECVHKINSALEKPLTMNIGVPVINLEIWKHLSGSFSQRFIDDFNFDIRAIISPTSIMLDIAKNEGKINWIKCSDRIYVGTNEKKNITNIFLDKLTQVEIDNFCESIG
>LR134189.1|VEB75601.1|3499428_3502758_-|Hemolysin-precursor
MTLSAGQDLSARAADISSQKNLSVNVGRDINITAGEQAGDFVKHTKTTEKGFLSSKTQETHDAVTDNTAISSTLSGDKVNITAGHDVTVSGSNVLGTQDVAINAGNQLNVTTVSETQDETHISKTTKSGLMGTGGIGFTVGKTSEKVTQESDSNQQKGSVIGSTAGNVTLTAGNTANLHGSDVIAAKDINVTASDIHVTAAENSRTDLTKVETKSSGLTVSLGGSVGAALDSMVQTAQSAKSEDDSQLAALKGMKAGLQGAQAVQGVRLSEAQDKAPSIGVNVSYGSSSSSSTTKTEQHTASGSSLSAGDNITLTATGNQSGSQGNLAVQGSQLDAGKDITLTAKNDIDLSSAKNTQTVDGKNKSSGMSVGVGYGTDGFSVNANVNQGKGFEKGNSQFYTDTDVTAGKQLTLESGKDTTLTGAQLKGETVKATVGGDLTLSSQQTTDKYDSKQTSMSAGGSVSQAGGVNGSINASKTEMHSDYQSVDKQTGIQAGKGGFDITVDKHTQLDGAVIASTADKDKNKLDTGTLDFGDIKNKADYKVDSQSGGFSTGGASVGDQFMTNAASSLLTNVNGSGSASNTTHSAVSEGEIVIRDKDNQQQNVADLSRDTDNAHEKLNTIFDKEKEQKRIEKVQLIGEMGQQITDIAVTQIQIKVEQEFKPTAAEREVAAKLLSEKGLPSDGSAVDSYLKQQAVNASGWGVGGDNRRIVEAGTALAQGLAGGDVNKAIANASAPYIANEIAKNIGEENKAGRLAAHAIANVALALAKGENAGAQSLGAFTGEAVGMLSEKLYGKDPSLLSESEKATVSAFASLAAGIAGGLVGGDTSTAANTAQAGKTTVENNQMSTQKIFGNSGANSLAGIQSYVDYGIKEGKTVQELDASVRDMTKGDHPEGQDPARGLLVAWGNFMGIPLDVYWSNEEMTPEKAAQILSGSIPTSEAKLIQYMAAKSYLAFAKTGQALPEWNAGKGEYSFKDTGKVTDVKLPSGEFSSGSLPSNDDTVWSSIKATQPQIPGTSIPKSFEMTVNGQTIWVNPNATKHMGEYLTRNGLSNSTSEGSQAMLVSLQSAVKEASLQGFKHNEKMQVGRWELVFSQRPTDPYPVLKHALYK

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Crispr_ID: LR134189_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134189_3

3823482-3823615

Orphan

Consensus_repeat	Method
CCCGAGTAGCTGAGAGCAACCAACACCCCTACAATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134189_3

>merge|LR134189|3|3823482-3823615|CRISPRCasFinder
CCCGAGTAGCTGAGAGCAACCAACACCCCTACAATGCAAATTATGACGAGGTAGGCGGCAAGCAATGGATATCTCGGGAAGCATACACAAGTATGTGCCCGAGTAGCCGAGAGCAACCAACACCCCTACAATGC

>LR134189|3|3|3823482-3823615|CRISPRCasFinder
CCCGAGTAGCTGAGAGCAACCAACACCCCTACAATGC	AAATTATGACGAGGTAGGCGGCAAGCAATGGATATCTCGGGAAGCATACACAAGTATGTG
CCCGAGTAGCCGAGAGCAACCAACACCCCTACAATGC

Protein	Signature genes	Signature genes Name	Protein_function
LR134189.1\|VEB76506.1\|3822758_3823277_+\|Regulator-of-ribonuclease-activity-A	unknown	unknown	gnl\|CDD\|236487
LR134189.1\|VEB76482.1\|3813761_3814496_+\|Adhesin/invasin-protein-PagN	unknown	unknown	gnl\|CDD\|226163
LR134189.1\|VEB76503.1\|3821721_3822639_+\|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|235695
LR134189.1\|VEB76520.1\|3830919_3832044_-\|Multidrug-resistance-protein-D	unknown	unknown	gnl\|CDD\|183259
LR134189.1\|VEB76527.1\|3833212_3833635_-\|Predicted-membrane-protein	unknown	unknown	gnl\|CDD\|225694
LR134189.1\|VEB76530.1\|3833687_3834293_+\|Protein-of-uncharacterised-function-(DUF1454)	unknown	unknown	gnl\|CDD\|369310
LR134189.1\|VEB76533.1\|3834509_3835298_+\|Triosephosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
LR134189.1\|VEB76536.1\|3835776_3836721_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|370458
LR134189.1\|VEB76512.1\|3824174_3824996_+\|Aquaglyceroporin	unknown	unknown	gnl\|CDD\|223653
LR134189.1\|VEB76493.1\|3818739_3819492_+\|Cell-division-protein-FtsN	unknown	unknown	gnl\|CDD\|237191
LR134189.1\|VEB76496.1\|3819659_3820190_+\|ATP-dependent-protease-subunit-HslV	unknown	unknown	gnl\|CDD\|235477
LR134189.1\|VEB76509.1\|3823631_3823871_-\|Cell-division-protein-ZapB	unknown	unknown	gnl\|CDD\|225616
LR134189.1\|VEB76515.1\|3825038_3826565_+\|Glycerol-kinase	unknown	unknown	gnl\|CDD\|234594
LR134189.1\|VEB76490.1\|3817551_3818580_+\|HTH-type-transcriptional-repressor-CytR	unknown	unknown	gnl\|CDD\|182923
LR134189.1\|VEB76487.1\|3815062_3817261_+\|Primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
LR134189.1\|VEB76479.1\|3813619_3813712_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134189.1\|VEB76485.1\|3814592_3814808_-\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234576
LR134189.1\|VEB76499.1\|3820201_3821536_+\|Unfoldase-HslU	unknown	unknown	gnl\|CDD\|235364
LR134189.1\|VEB76518.1\|3826752_3830775_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134189.1\|VEB76524.1\|3832453_3833200_+\|Ferredoxin--NADP-reductase	unknown	unknown	gnl\|CDD\|182844

Protein	Function_ID	Function_description	E-value
LR134189.1\|VEB76506.1\|3822758_3823277_+\|Regulator-of-ribonuclease-activity-A	gnl\|CDD\|236487	PRK09372, PRK09372, ribonuclease E inhibitor RraA.	2.00383e-96
LR134189.1\|VEB76482.1\|3813761_3814496_+\|Adhesin/invasin-protein-PagN	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	5.14954e-12
LR134189.1\|VEB76503.1\|3821721_3822639_+\|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	1.70056e-130
LR134189.1\|VEB76520.1\|3830919_3832044_-\|Multidrug-resistance-protein-D	gnl\|CDD\|183259	PRK11652, emrD, multidrug transporter EmrD.	3.55522e-178
LR134189.1\|VEB76530.1\|3833687_3834293_+\|Protein-of-uncharacterised-function-(DUF1454)	gnl\|CDD\|369310	pfam07305, DUF1454, Protein of unknown function (DUF1454). This family consists of several Enterobacterial sequences of around 200 residues in length which are often known as YiiQ proteins. The function of this family is unknown.	2.57102e-63
LR134189.1\|VEB76533.1\|3834509_3835298_+\|Triosephosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	1.10543e-143
LR134189.1\|VEB76536.1\|3835776_3836721_+\|Uncharacterised-protein	gnl\|CDD\|370458	pfam09381, Porin_OmpG, Outer membrane protein G (OmpG). Porins are channel proteins in the outer membrane of gram negative bacteria which mediate the uptake of molecules required for growth and survival. Escherichia coli OmpG forms a 14 stranded beta-barrel and in contrast to most porins, appears to function as a monomer. The central pore of OmpG is wider than other E. coli porins and it is speculated that it may form a non-specific channel for the transport of larger oligosaccharides.	3.76039e-49
LR134189.1\|VEB76512.1\|3824174_3824996_+\|Aquaglyceroporin	gnl\|CDD\|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	3.56376e-78
LR134189.1\|VEB76493.1\|3818739_3819492_+\|Cell-division-protein-FtsN	gnl\|CDD\|237191	PRK12757, PRK12757, cell division protein FtsN; Provisional.	1.23443e-86
LR134189.1\|VEB76496.1\|3819659_3820190_+\|ATP-dependent-protease-subunit-HslV	gnl\|CDD\|235477	PRK05456, PRK05456, ATP-dependent protease subunit HslV.	1.1148e-132
LR134189.1\|VEB76509.1\|3823631_3823871_-\|Cell-division-protein-ZapB	gnl\|CDD\|225616	COG3074, COG3074, Uncharacterized protein conserved in bacteria [Function unknown].	1.76406e-16
LR134189.1\|VEB76515.1\|3825038_3826565_+\|Glycerol-kinase	gnl\|CDD\|234594	PRK00047, glpK, glycerol kinase GlpK.	0
LR134189.1\|VEB76490.1\|3817551_3818580_+\|HTH-type-transcriptional-repressor-CytR	gnl\|CDD\|182923	PRK11041, PRK11041, DNA-binding transcriptional regulator CytR; Provisional.	0
LR134189.1\|VEB76487.1\|3815062_3817261_+\|Primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
LR134189.1\|VEB76485.1\|3814592_3814808_-\|50S-ribosomal-protein-L31	gnl\|CDD\|234576	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed.	3.11201e-39
LR134189.1\|VEB76499.1\|3820201_3821536_+\|Unfoldase-HslU	gnl\|CDD\|235364	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU.	0
LR134189.1\|VEB76527.1\|3833212_3833635_-\|Predicted-membrane-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	8.33974e-15
LR134189.1\|VEB76524.1\|3832453_3833200_+\|Ferredoxin--NADP-reductase	gnl\|CDD\|182844	PRK10926, PRK10926, ferredoxin-NADP reductase; Provisional.	2.69244e-169

>LR134189.1|VEB76506.1|3822758_3823277_+|Regulator-of-ribonuclease-activity-A
MKYDTSELCDIYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGILYDLLEEDGRGRILLVDGGGSVRKALIDAELAQVAVSNGWEGIVVYGAVRQVDALMELDLGIQAVAATPAGCPDEGIGESDIRVNFGSVTFFSGDYLYADNTGMILSEEPLTQAANDDFDETIDE
>LR134189.1|VEB76503.1|3821721_3822639_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase
MNSSSISRKQAWLESLRPKTLPLGVIAIVTGSALTYLTGNFKWPVALLSIITAGLLQILSNLANDYGDAVKGSDTAERIGPLRGMQKGIITKEDMKKALKLNIFAACLSGILLIVVACEKPEDAIGFLALGLVAIVAAITYTVGKKPYGYLGLGDISVLIFFGWLSVIGTFYLQANSFNPITILPATACGLLSVAVLNINNMRDIENDVKAGKNTLAVRLGPVGARIYHTILIVAAILCLAFFNLMYLQGWSGWLFLLAVPMLMNHVRKVLSDPTPEGMRPMLENMVKAALVTNVLFSIGVVLSK
>LR134189.1|VEB76499.1|3820201_3821536_+|Unfoldase-HslU
MSEMTPREIVSELDNHIIGQHKAKRSVAIALRNRWRRMQLNETLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAVKMVRLQSIEKNRYRAEEMAEERILDVLIPPAKNNWGQAEPVDEPSPARQAFRKKLREGQLDDKEIEIEVSAAPMGVEIMAPPGMEEMTNQLQSMFQNLAGQKQKPRKMKIKEAFKLLVEEEAAKLVNPEELKEQAIEAVEQNGIVFIDEFDKICKRGGQSSGPDVSREGVQRDLLPLIEGCTISTKHGMVKTDHILFIASGAFQVSSPSDLIPELQGRLPIRVELQPLTTEDFERILTEPNSSLTEQYKALMATEGVNIDFTADGIRKIAESAWQVNESTENIGARRLHTVLERLMEDISFDASEREGQSIQINAEYVSQHLDELVADEDLSRFIL
>LR134189.1|VEB76496.1|3819659_3820190_+|ATP-dependent-protease-subunit-HslV
MTTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELFERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLIAIGSGGPYAQSAARALLENTDLSAKEIAEKALEIAGDICIYTNHNVNFEEISSKS
>LR134189.1|VEB76493.1|3818739_3819492_+|Cell-division-protein-FtsN
MTTLVVAVAIVVLFVGGLFFITHNKKETSQTNSAPHATKPGNTLPPKPEDPWRYKRELEEPWQDYTSPAQPNTGGSSGNIRQTDLTAEQRQLLEQLDSDRRQPVTNLQEIPFNGKPVPRSQVIINEPAQPARPIDAPVQRKPSVTEPKPEVRPTAPVQPVAKPEPKPEPKPAPVNNMQNMLVQCGSFKTAEQAESVRATLAFSGIESRITSGGGWHRIVLGPYSKSTAEGMRDRAAGVGVSGCILRASGG
>LR134189.1|VEB76490.1|3817551_3818580_+|HTH-type-transcriptional-repressor-CytR
MENKKHNNTATMKDVANAAGVSTATVSRTLMNPEKVSLQTRQKVEQAVLDVGYYPHNLARSYKRNESKTILAIVPDISDPFFSDVICGLEEVAAHEGYFVLIGDCKHQRKQENAFINLIITKQIDGMVLLGSNLPFDISTEEQKNLPPIVMANEFAPELKLPTVHIDNLTAAFNATHYLLRQGHKRIACIAGPEGMPHSEYRLEGYKKAMLRTGEGLRESYIVRGDFTHESGAEALKTLLSLPEPPTAVFCHTDIMAFGAMWQAKKMGLKIPDDLSFVGFDNLEQAKYTLPALTTINHPRTEIGRHAMLLLLEQLQGNSVTPGSRLLDSDLIIRESTKAPKC
>LR134189.1|VEB76487.1|3815062_3817261_+|Primosomal-protein-N'
MIVVQVALPVPLNRTFDYRLADNMPLPVVGSRVMVPFGKRQALGIVVNLSDKSEFPEDQLKTIELVLDSQTLFPDDLWQLLLWSSQYYHYPIGEVLFHAMPTLLRQGKPAEFTPIWQWQATIAGQEVDLNELKRSPKQQQALALLRRRPIYRHQVAELEINESALQSLKKKQYAELHPVQPVVEQWQSHFTVCGERLRLNSEQATAVGAIRAEDDNFSPWLLAGITGSGKTEVYLSVLENILAKGKQALVLVPEIGLTPQTINRFRERFNVPVDVLHSALNDSERLAVWLRAKQGSNGIIIGTRSALFTPFAHLGIIIIDEEHDSSYKQQDGWRYHARDLAVFRAKKENIPIIMGTATPSLETLSNVQQNKYRQLNLTIRAGNARPADQHLIDLKGQPLKFGLSHLLIQHIKNHLAQNNQVILFLNRRGYSPALICHECGWIAECQRCDHYYTLHQNFHQLRCHHCDSQRPVPHQCPHCGSTNLVPVGMGTEQLEEGISELFPDVPVTRIDRDTTSRKGELEQHLNAVHEGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSSDFRAAERFAQLYVQVSGRAGRAGKQGEVFLQTHHPEHPLLLTLLENGYNAFTQEALEERRVAMLPPFTSHILIRSEDHNNQDARNFLHNVRQYISQHPQSDSRLWILGPAPSIQAKRGGRFRWQLLLQHPSRAYLQQFMAQLLPELLKQPESRKVKWNIDVDPTDG
>LR134189.1|VEB76485.1|3814592_3814808_-|50S-ribosomal-protein-L31
MKKGIHPKYEEITATCSCGNVMKINSTAGHSLNLDVCGNCHPFYTGKQRDVATGGRVDRFNQRFSIPGAKK
>LR134189.1|VEB76482.1|3813761_3814496_+|Adhesin/invasin-protein-PagN
MKKIILISTCLLFANLAIASSNNGVYLSSKIGVSVLNMYDSKFEYSNDKKPDFKMLKFNDKSHPAFGNYLAVGYNFYDQFSMPIRAELEVGMRGKVSNTHSLNALSSLSSSSSDMKNEATLTTVMLNGYYDMKNQTAFAPYISFGLGLASTRYENTQRSEFEILGLKQSSNQSKSQRINKLAWSLGLGSRYAFNDNLSFDLGYRFTEAGKYKISMPNAFDKDGTDTSTIKLAAHDFMFGIAYRF
>LR134189.1|VEB76479.1|3813619_3813712_-|Uncharacterised-protein
MKLDVLEAIGDLQITTLNFDIKRLIIETKC
>LR134189.1|VEB76509.1|3823631_3823871_-|Cell-division-protein-ZapB
MSFEVFEKLENKVQQAIDTIALLQMEIDELKEQNSALSQELQANKSGTESLVRENEQLKQEQATWQERLRTLLGKMEEV
>LR134189.1|VEB76512.1|3824174_3824996_+|Aquaglyceroporin
MSKMTSSTLMGQCISEFLGTALIVFFGLGCVAAVRLAGAQLGLWEISIIWGFGVALAVYLTAGISGAHLNPAVTLALWLFACFDKRKVVPYIVAQMLGGFCAAALVYTMYSPVFTDYEQVHHIIRGTQESLFTAGVFSTYPAPQISVLHAFFIEVIISAILVCLILGLTDDGNGVPKGPLAPLLIGILIAVIGGSFGPLTGFALNPARDFGPKVVAYLAGWGDIAMTGGRDIPYFLVPLTAPIVGGLLGALGYRKLIGRHLPCMVCESEEEKK
>LR134189.1|VEB76515.1|3825038_3826565_+|Glycerol-kinase
MTTETNIAKKYIVALDQGTTSSRAVVLDHDANIISISQREFTQIYPKPGWVEHDPMEIWATQSSTLIEVLAKADIRTDEVAGIGITNQRETTIVWEKSTGKPVYNAIVWQCRRTADFCTHLKQNDKDLEEYIRQNTGLVVDPYFSGTKVKWILDNVEGVRERAEKGELLFGTVDTWIVWKMTQGRVHVTDYTNASRTMLFNIRNLEWDDKILKALNIPRSMLPEVRSSSEVYGQTNIGGKGGTRIPISGIAGDQQAALYGQLCVKSGMAKNTYGTGCFLLMNTGDTAVRSNHGLLTTIACGPRGEVNYALEGAVFVGGASIQWLRDELKLIDESEDSEYFATKVKDSNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGANRNHIIRATLESIAYQTRDVLDAMQADSGERLKALRVDGGAVANNFLMQFQSDILGTSVERPAVRESTALGAAYLAGIAVGFWESLDELQSKASIERVFKPGIETTERNYKYEGWKKAVARAQEWEDRA
>LR134189.1|VEB76518.1|3826752_3830775_+|Uncharacterised-protein
MDNRRKDPHNLMSLRSFPLVSQAIQDGSLQLGYYRNRGRIAKVYTDNFFIAGLKSHPQKSESGETAFGIMSWLLDKPRLPGEKKLSYLLSALNQPEFSGFEFNSQQNLWVDSFHSPHQWHDGEPRSQAQLVDLLLPSGEWHRHYGVVVLSINANDQQVALVRHWLELTGGSLIILDNQQNPASPPIQKLLEELDSIPIEPPSLLPQPKTPTIDSPSGMLVTAYPVIENEKNIEKSTYSLANLTHYASGLPKQPTSTTWVYEGVLTAPKSQRIHVYLDTLYVTEDLTFEVAQQTQQIRGADESGEIVLHHVPQGKQIDFKITTTTNGQPPDIRLGWGFADKESVEFIPNSAIRHSAISIDNSLPQKPKIAPVPKQTFLSHRFNQVISLPPSAINRLVLDQETLQNSHYFSISLHSSQQNIILKLDDVAVTEQGSWEDLTHEIEDKINQQLSQNELPSITLHYADSRMIIQCDGMTISQFQLKNQQILPILVVENSSKTADKLVIGTISGQLPIHEEIHHFQILESPLFGRVDLDPQTGEWHYLPDSHQSMKRHDQFDITAVMKDGSLSAPMSIHLNTEDAPLVSKPGKRIFTLQDPIYSQPKHRYQPVPHDIQVHGIQLAQTHLLAPDAPYFSLTANRWALLKVDITSPSSGNAPDLVAIIRNKAGNELEKITLIGPSVLPSELDAIPQTPSIDAQNLHRNSYTAPIKGMWIQPDIQIQIMAGNTPVTQPYTDSNGVFLPTVKNVTPMTSHVTNTSLYRQGHGTYAYSPLSWGLEASAKLPTHQFTLFSYPSTSLKPMLYPYVVKDEKGYVDKSTLIHPTYDSPNKVTEPLRSQIGWAYFDSQKAARRTQLYSEFFYSSIEHLPMRRGVSQVIGLATHNFGGGITKPSILWHEVFGHGLSLGHTTKAGYPYSSESHGGSIAYDQQRQQYTTYRKDDQHSEIIPAMYPADYPHYTEQYDAFLAHCDYLTYQAQSFLASIDERKTPREYLPVYQLNGTFLTLEDGTLHPYSRLAITETLGQLIPKTYRDANCHLVVIYATQSGLLSETISLSLSDNELNLNIPNKGELVRLDIIKTEDQIDIPIFQYRNPESLANRVFIHSDDNTPPEQLQMDDYWQGSPLFWSASQDNSVLRAKWVTDGQHHQQFFSLQKPFGGQPVDTQATFIPLNHLELLADESQPDSTHLDVQSEIRLLSDVNIHQTVDIRSLRLNHENLTYWVTLVILDSQGKHHETMPLESWYLEEDNGMLTIRGTLDSTPNLNIAGIKVYIDQHLSDEIEASSILIYQNDQGTLAENSDLLNYDRPVEFNALISQMAGISEDKAKNSLQAEPIPITSTVLSMPLVA
>LR134189.1|VEB76520.1|3830919_3832044_-|Multidrug-resistance-protein-D
MCSDIVDFESKMRKLENFNLLLMLIALAAVGQMTQTIYVPVIAEIAVYFGEPSGSVQRVMAAYLFSYGFSQLVYGPLSDQIGRRPVILAGLTIFLISTIVAIFAPSLTVLTIASGLQGLGTGVAGVMVRTMPRDLYKGTSLRFANSLLNMGVLVSPLLAPMFGGILAHFFGWHACYIFLFLLGGSVFFSMYRWLPETRPVSPEKHKMLASFRELLSNGPFVSYLIMLIGALAGIAVFESSSGVLMGGVLGLSSITVSILFILPIPAAFFGAWYAGREGKNFASLMWQSVMICLAAGLMMWIPSWFGMMNIWTLLVPAAIFFLWGRNAVPTGNHGGYGAISLFGRCRWSASRWYAKCRLWGCNMGFCIDASKWAI
>LR134189.1|VEB76524.1|3832453_3833200_+|Ferredoxin--NADP-reductase
MANWVTGRVTEAKYWTDTLFSLIVDAPIRPFTAGQYAKLALEVDGVRIARAYSYVNAPSDNQLEFYFVIVPNGKLSPKLANLQVGDTLQITDEAAGFFVLDEIPECKNLWMLSTGTAIGPFLSILQENKGLERFDNIVLLHAVRYQKDLSYLPLMKQLEKSLAGKLRIVTVVSRELAEGSLYGRVPALIENHQLEEFVGLPIDAENCHIMLCGNPEMVRDTRDMLKNTHGLIKHLRRKPGHITSEQYW
>LR134189.1|VEB76527.1|3833212_3833635_-|Predicted-membrane-protein
MTLQQWAFSFKGRIGRRPFWAGIAACFILMTLAVLLQNGLSLPDWVVMGLFILLLYPLAAIFTKRLHDRGKPGGWFALIILAFALYSIDVSQFEPIWQWGIGRFLPSFITMIMLMDCGVFVGMEAENQYGEKTDTVNYLS
>LR134189.1|VEB76530.1|3833687_3834293_+|Protein-of-uncharacterised-function-(DUF1454)
MAQPIFRSISIIITALVLNLPPLAFAQKVPTLPDTNLSVDYLAPDAPTFNLTIPELRSQFNQKYKDLYLHEYKVIASQDITLPYIRAASRINQQIYSSAVLERGSEKIKSLQITLLPTDNDADAKANRQLIEHYIIAIIHQFDPEVSLDKAPELTAALNRFMANKNPTRAEEARLGALRYILVKSDNNVLTFAVEPIKLGQ
>LR134189.1|VEB76533.1|3834509_3835298_+|Triosephosphate-isomerase
MRHPLVMGNWKLNGSTQMVNDLIAALRHELSSVDGCDVAIAPPTIYLNQAKHAVSGSRIALGAQNVDVNLSGAFTGETSAAMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFAVLKEQGLIPVLCIGESDAENEAGKTEEVCARQIDAVLNTLGAEAFQGAVIAYEPIWAIGTGKSATPAQAQAVHKFIRGHIAKKDAAIAEQVIIQYGGSVNDSNAAELFTQPDIDGALVGGASLKADAFAVIVKAAAEAKKNKIIKFSI
>LR134189.1|VEB76536.1|3835776_3836721_+|Uncharacterised-protein
MRSINGLILSTTILFPIISYSQVKDDHWQVETDVYVELEEYQGQKDKFNNKVYDKASMIGKLSLTNPASKWQFDLEHRESLRNHGKNFSYSRDSYIRNRTQIGITRQMIKDKISNLDINLSYRKESNDGTPGTSARSANSLYWVMPSGTIHLDDKWDFNFWGAFYYYSNFYDDNTYEFESEVGVSYKITDDIKAKLSYYNDKSWNHEFETQTMQRQIRIGLPVTINQDWSISPYFRYLLTDSEYNQHGKSIQQLRNGYRIGTKVDYKITPKLTLWGGIAYEPTKWKYPKGGEKTSGASNNQTMYLGQLGVKYSW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

158371 : 166142

Escherichia_phage(83.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB63038.1\|158371_160240_+	Dimethyl sulfoxide reductase DmsA precursor	A0A077SK27	Escherichia_phage	3.3e-156	49.6
VEB63039.1\|160199_160817_+	Dimethyl sulfoxide reductase DmsA precursor	A0A077SK27	Escherichia_phage	1.9e-55	61.0
VEB63040.1\|160828_161446_+	DMSO reductase iron-sulfur subunit	A0A077SL61	Escherichia_phage	3.1e-74	59.1
VEB63041.1\|161447_162305_+	DMSO reductase anchor subunit	A0A077SK59	Escherichia_phage	7.3e-26	35.7
VEB63042.1\|162407_163022_+	Twin-arginine leader-binding protein DmsD	A0A077SLS7	Escherichia_phage	1.1e-23	34.0
VEB63043.1\|163018_163678_-	Flavocytochrome yedZ	NA	NA	NA	NA
VEB63044.1\|163677_164688_-	Sulfoxide reductase catalytic subunit yedY precursor	NA	NA	NA	NA
VEB63045.1\|164777_166142_-	Probable sensor-like histidine kinase YedV	W8CYF6	Bacillus_phage	1.1e-10	21.6

DBSCAN-SWA_2

1414491 : 1435238

Morganella_phage(58.82%)

integrase

attL 1410767:1410781|attR 1420595:1420609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1410767:1410781	attL	NA	NA	NA	NA
VEB68063.1\|1414491_1416546_+	Helicase IV	A7KV33	Bacillus_phage	8.5e-20	26.0
VEB68066.1\|1416605_1417139_-	Methylglyoxal synthase	NA	NA	NA	NA
VEB68068.1\|1417179_1417593_+	acetyl coenzyme A synthetase (ADP forming), alpha domain	NA	NA	NA	NA
VEB68071.1\|1417656_1417977_-	Heat shock protein hspQ	NA	NA	NA	NA
VEB68074.1\|1418196_1418475_+	Acylphosphatase	NA	NA	NA	NA
VEB68077.1\|1418490_1418892_-	Sulfurtransferase TusE	NA	NA	NA	NA
VEB68080.1\|1419265_1420477_+\|integrase	Putative prophage CPS-53 integrase	Q7M297	Enterobacteria_phage	1.8e-131	57.3
VEB68082.1\|1421590_1421788_+	Predicted transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	6.6e-07	44.4
1420595:1420609	attR	NA	NA	NA	NA
VEB68085.1\|1421787_1422183_+	Uncharacterised protein	A0A1W6JPH9	Morganella_phage	3.3e-29	50.7
VEB68087.1\|1422195_1422798_+	Uncharacterized phage-encoded protein	A0A1W6JPH8	Morganella_phage	9.0e-71	68.5
VEB68090.1\|1422797_1423328_+	Uncharacterised protein	A0A1W6JPK3	Morganella_phage	7.7e-18	39.1
VEB68092.1\|1423382_1423598_-	Uncharacterised protein	A0A2H4JB52	uncultured_Caudovirales_phage	1.8e-10	54.2
VEB68094.1\|1423698_1423920_+	Uncharacterised protein	A0A1W6JPK3	Morganella_phage	6.5e-11	51.5
VEB68097.1\|1423912_1424077_+	Uncharacterised protein	NA	NA	NA	NA
VEB68100.1\|1424079_1424340_+	Uncharacterised protein	NA	NA	NA	NA
VEB68106.1\|1424336_1424516_+	Uncharacterised protein	NA	NA	NA	NA
VEB68113.1\|1424512_1424722_+	Uncharacterised protein	A0A1W6JPF1	Morganella_phage	5.2e-10	49.3
VEB68119.1\|1424718_1425300_+	ORF6N domain	A0A1B5FPC0	Escherichia_phage	5.7e-30	60.7
VEB68122.1\|1425296_1425473_+	Uncharacterised protein	NA	NA	NA	NA
VEB68125.1\|1425469_1425664_+	Uncharacterised protein	NA	NA	NA	NA
VEB68128.1\|1425663_1425885_+	Uncharacterised protein	A0A286S2B3	Klebsiella_phage	8.8e-08	39.2
VEB68131.1\|1425881_1426478_+	Uncharacterised protein	A0A1B5FPB4	Escherichia_phage	2.6e-22	36.2
VEB68134.1\|1426492_1426837_+	Uncharacterised protein	A0A1W6JPD8	Morganella_phage	2.3e-47	76.3
VEB68137.1\|1426833_1428291_+	DNA primase TraC	A0A1W6JPG0	Morganella_phage	2.3e-160	59.7
VEB68140.1\|1428247_1429534_+	Superfamily II helicase and inactivated derivatives	A0A1W6JPG0	Morganella_phage	5.1e-164	69.5
VEB68143.1\|1429924_1430377_+	Conjugal transfer repressor	A0A1W6JPI6	Morganella_phage	8.6e-18	68.2
VEB68146.1\|1430389_1430611_+	Uncharacterised protein	NA	NA	NA	NA
VEB68149.1\|1430681_1431194_+	Uncharacterised protein	NA	NA	NA	NA
VEB68152.1\|1431374_1431548_+	Uncharacterised protein	NA	NA	NA	NA
VEB68154.1\|1431547_1431886_+	Uncharacterised protein	NA	NA	NA	NA
VEB68157.1\|1431899_1435238_+	Uncharacterised protein	A0A1W6JNU2	Morganella_phage	7.5e-34	27.7

DBSCAN-SWA_3

2432999 : 2518514

Salmonella_phage(37.78%)

head,terminase,portal,capsid,plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB71027.1\|2432999_2434421_+\|tRNA	Glutamate--tRNA ligase	NA	NA	NA	NA
VEB71031.1\|2435018_2436350_+	Putrescine oxidase	NA	NA	NA	NA
VEB71034.1\|2436372_2436588_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB71037.1\|2436667_2437852_-	Nucleoside-transport system protein nupC	NA	NA	NA	NA
VEB71040.1\|2437938_2438064_+	Uncharacterised protein	NA	NA	NA	NA
VEB71043.1\|2438077_2440114_-	DNA ligase	A0A289ZTZ3	Serratia_phage	1.0e-142	50.1
VEB71045.1\|2440222_2441233_-	Tyrosine recombinase XerC	A0A0M4RTQ0	Salmonella_phage	6.1e-96	51.2
VEB71048.1\|2441323_2441536_-	Uncharacterised protein	NA	NA	NA	NA
VEB71051.1\|2441532_2441790_-	Uncharacterised protein	Q1JS61	Enterobacteria_phage	2.3e-12	47.9
VEB71055.1\|2441918_2442269_+	Uncharacterised protein	NA	NA	NA	NA
VEB71058.1\|2442281_2442500_+	Uncharacterised protein	NA	NA	NA	NA
VEB71062.1\|2442642_2443074_+	Uncharacterised protein	NA	NA	NA	NA
VEB71065.1\|2443142_2443397_+	Uncharacterised protein	NA	NA	NA	NA
VEB71067.1\|2443389_2443611_+	conjugal transfer protein TraR	A0A0M3LS11	Mannheimia_phage	2.0e-12	52.8
VEB71095.1\|2443611_2443911_+	Domain of Uncharacterised Function with PDB structure	A0A059T699	Listeria_phage	1.7e-09	46.6
VEB71097.1\|2443903_2444725_+	DNA adenine methylase	E5G6L8	Salmonella_phage	7.9e-62	49.8
VEB71100.1\|2444724_2445048_+	Uncharacterised protein	NA	NA	NA	NA
VEB71103.1\|2445040_2447107_+	Bacteriophage replication gene A protein (GPA)	M1SV59	Escherichia_phage	1.0e-166	48.3
VEB71105.1\|2447558_2449430_+	Predicted NTPase (NACHT family)	NA	NA	NA	NA
VEB71107.1\|2449743_2451537_-	Retron-type reverse transcriptase	NA	NA	NA	NA
VEB71110.1\|2452112_2453027_+	Uncharacterised protein	NA	NA	NA	NA
VEB71112.1\|2453023_2453770_+	Uncharacterised protein	NA	NA	NA	NA
VEB71115.1\|2453803_2454841_-\|portal	phage portal protein, PBSX family	A0A1S6KZW5	Salmonella_phage	2.7e-139	69.5
VEB71118.1\|2454840_2456598_-	Uncharacterized conserved protein	A0A1S6KZW3	Salmonella_phage	9.1e-273	76.0
VEB71121.1\|2456754_2457582_+\|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	F1BUR1	Erwinia_phage	5.0e-56	46.7
VEB71123.1\|2457594_2458677_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.2e-121	62.1
VEB71126.1\|2458703_2459339_+\|terminase	Phage small terminase subunit	V9IQK3	Stenotrophomonas_phage	3.1e-21	40.8
VEB71129.1\|2459424_2459901_+\|head	Phage head completion protein (GPL)	A0A0F7LDJ1	Escherichia_phage	1.9e-23	42.0
VEB71131.1\|2459897_2460101_+	Phage Tail Protein X	S4TTA0	Salmonella_phage	8.0e-16	53.7
VEB71133.1\|2460106_2460409_+	Uncharacterised protein	E7C9S8	Salmonella_phage	1.6e-23	55.7
VEB71136.1\|2460405_2460768_+	Peptidase M15	A0A0G2SSI0	Proteus_phage	1.4e-34	61.4
VEB71139.1\|2460769_2461327_+	Uncharacterised protein	K7PHH7	Enterobacteria_phage	3.8e-15	35.6
VEB71142.1\|2461310_2461739_+\|tail	P2 phage tail completion protein R (GpR)	E5G6N3	Salmonella_phage	8.1e-26	40.8
VEB71144.1\|2461735_2462353_+	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	5.8e-25	35.1
VEB71147.1\|2462441_2462822_+	Uncharacterised protein	NA	NA	NA	NA
VEB71149.1\|2462828_2462996_+\|plate	Phage P2 baseplate assembly protein gpV	E5G6N6	Salmonella_phage	6.0e-09	63.0
VEB71151.1\|2462982_2463453_+\|plate	Phage P2 baseplate assembly protein gpV	A0A2I8TV69	Erwinia_phage	7.5e-41	60.1
VEB71154.1\|2463449_2463731_+	Gene 25-like lysozyme	F1BUP4	Erwinia_phage	9.7e-20	70.6
VEB71157.1\|2463794_2464706_+	Uncharacterized homolog of phage Mu protein gp47	A0A218M4K5	Erwinia_phage	2.5e-104	66.0
VEB71160.1\|2464698_2465310_+\|tail	Bacteriophage P2-related tail formation protein	F1BUP2	Erwinia_phage	3.2e-76	66.3
VEB71163.1\|2465306_2466530_+	Uncharacterised protein	A0A1S6KZZ8	Salmonella_phage	9.4e-59	43.8
VEB71166.1\|2466516_2467020_+\|tail	Caudovirales tail fibre assembly protein	S4TUB9	Salmonella_phage	1.9e-18	37.9
VEB71168.1\|2467135_2468308_+\|tail	Phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.8e-167	72.9
VEB71171.1\|2468310_2468826_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	5.2e-59	63.2
VEB71174.1\|2468841_2469147_+\|tail	Phage tail protein E	E5G6P9	Salmonella_phage	9.9e-18	56.0
VEB71177.1\|2469273_2471886_+\|tail	Phage-related minor tail protein	A0A2H4JE61	uncultured_Caudovirales_phage	2.2e-129	37.6
VEB71180.1\|2471991_2472336_+	Phage protein U	S4TUC3	Salmonella_phage	1.4e-31	53.2
VEB71183.1\|2472332_2473418_+	Phage protein D	E5G6Q3	Salmonella_phage	7.9e-118	59.2
VEB71186.1\|2473492_2473711_+	DNA-binding transcriptional regulator	Q53ZE7	Salmonella_virus	1.1e-18	68.8
VEB71189.1\|2473740_2474271_-	Uncharacterised protein	NA	NA	NA	NA
VEB71192.1\|2474557_2475562_-	Cell division protein ZipA	NA	NA	NA	NA
VEB71195.1\|2475781_2476546_+	putative sulfate transport protein CysZ	NA	NA	NA	NA
VEB71198.1\|2476773_2477730_+	Cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	7.6e-72	50.3
VEB71200.1\|2478072_2478330_+	Phosphocarrier protein HPr	NA	NA	NA	NA
VEB71203.1\|2478466_2480194_+	Phosphoenolpyruvate-protein phosphotransferase	A0A1V0SGR7	Hokovirus	6.7e-18	33.3
VEB71206.1\|2480242_2480467_+	Glucose-specific phosphotransferase enzyme IIA component	NA	NA	NA	NA
VEB71209.1\|2480435_2480753_+	Glucose-specific phosphotransferase enzyme IIA component	NA	NA	NA	NA
VEB71211.1\|2480839_2481724_-	Cysteine synthase B	A0A1X9I5F1	Streptococcus_phage	6.6e-62	44.0
VEB71214.1\|2481790_2482879_-	Sulfate/thiosulfate import ATP-binding protein CysA	G9BWD6	Planktothrix_phage	2.8e-30	39.5
VEB71217.1\|2482881_2483742_-	Sulfate transport system permease protein CysW	NA	NA	NA	NA
VEB71219.1\|2483741_2484572_-	Sulfate transport system permease protein CysW	NA	NA	NA	NA
VEB71222.1\|2484571_2485594_-	Thiosulfate-binding protein precursor	NA	NA	NA	NA
VEB71225.1\|2486119_2486533_+	Uncharacterised protein family (UPF0150)	A0A0D4DCG1	Acinetobacter_phage	4.5e-21	43.3
VEB71228.1\|2486590_2487487_-	Probable deferrochelatase/peroxidase YfeX	S4VXK8	Pandoravirus	3.6e-23	31.1
VEB71231.1\|2487701_2488286_-	RpoE-regulated lipoprotein	NA	NA	NA	NA
VEB71234.1\|2488367_2488799_-	Acetyltransferase YpeA	NA	NA	NA	NA
VEB71237.1\|2488934_2489852_+	Coproporphyrinogen-III oxidase, aerobic	NA	NA	NA	NA
VEB71240.1\|2490009_2491143_+	Protease prtS precursor	NA	NA	NA	NA
VEB71243.1\|2491288_2492164_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA
VEB71246.1\|2492310_2493786_-	GTP-binding protein EngA	NA	NA	NA	NA
VEB71249.1\|2493914_2495087_-	Lipoprotein yfgL precursor	NA	NA	NA	NA
VEB71252.1\|2495108_2495732_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB71255.1\|2495742_2497020_-\|tRNA	Histidine--tRNA ligase	NA	NA	NA	NA
VEB71258.1\|2497233_2498355_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
VEB71260.1\|2498515_2499490_-	Cytoskeleton protein rodZ	NA	NA	NA	NA
VEB71263.1\|2499689_2500871_-	Ribosomal RNA large subunit methyltransferase N	NA	NA	NA	NA
VEB71265.1\|2501028_2501454_-	Nucleoside diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.6e-18	36.8
VEB71267.1\|2501744_2504066_-	Penicillin-binding protein 4 precursor	NA	NA	NA	NA
VEB71270.1\|2504184_2509227_-	Alpha-2-macroglobulin family N-terminal region	NA	NA	NA	NA
VEB71273.1\|2509452_2509905_-	enhanced serine sensitivity protein SseB	NA	NA	NA	NA
VEB71276.1\|2510039_2511335_-	Peptidase B	Q6GYZ8	Mycoplasma_phage	3.3e-38	40.5
VEB71279.1\|2511587_2511788_-	FeS assembly protein IscX	NA	NA	NA	NA
VEB71282.1\|2512050_2512386_-	2Fe-2S ferredoxin	NA	NA	NA	NA
VEB71283.1\|2512388_2514239_-	Hsc66	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.8e-104	39.2
VEB71286.1\|2514251_2514773_-	Hsc20	NA	NA	NA	NA
VEB71289.1\|2514884_2515208_-	Iron-sulfur cluster assembly protein	A0A2H4N7N5	Lake_Baikal_phage	2.4e-22	50.5
VEB71292.1\|2515414_2515801_-	NifU-like protein	A0A218MKD1	uncultured_virus	1.4e-53	78.1
VEB71294.1\|2515825_2517040_-	Cysteine desulfurase	A0A1X7C038	Faustovirus	6.1e-34	32.6
VEB71297.1\|2517168_2517666_-	HTH-type transcriptional regulator iscR	NA	NA	NA	NA
VEB71300.1\|2517782_2518514_-\|tRNA	tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ	NA	NA	NA	NA

DBSCAN-SWA_4

2575996 : 2628630

Cronobacter_phage(18.52%)

lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB71458.1\|2575996_2576479_+	Small protein B	W5RAM5	Staphylococcus_phage	5.2e-29	46.2
VEB71461.1\|2577376_2577646_-	Helix-turn-helix	A0A1W6JNW5	Morganella_phage	1.5e-06	32.9
VEB71464.1\|2577885_2578185_+	10K-L protein	NA	NA	NA	NA
VEB71467.1\|2578375_2579884_-	Domain of uncharacterised function (DUF1983)	A0A1P8DTI4	Proteus_phage	8.2e-97	46.0
VEB71470.1\|2580014_2581949_-	Uncharacterised protein	F1C571	Cronobacter_phage	1.7e-235	61.8
VEB71473.1\|2582009_2582612_-\|tail	Phage-related protein, tail component	F1C572	Cronobacter_phage	7.4e-57	59.1
VEB71476.1\|2582608_2583319_-	NlpC/P60 family	F1C573	Cronobacter_phage	5.8e-85	64.3
VEB71479.1\|2583315_2584059_-\|tail	phage minor tail protein L	F1C574	Cronobacter_phage	1.5e-83	57.2
VEB71481.1\|2584055_2584400_-	Phage-related protein	A0A1W6JP11	Morganella_phage	3.8e-18	40.7
VEB71484.1\|2584461_2584674_-	Uncharacterised protein	NA	NA	NA	NA
VEB71487.1\|2584707_2587653_-\|tail	Phage-related minor tail protein	A0A2P0WA05	Enterobacter_phage	1.2e-131	33.3
VEB71490.1\|2587806_2588253_+	Inhibitor of vertebrate lysozyme precursor	NA	NA	NA	NA
VEB71494.1\|2588331_2589009_-	Uncharacterised protein	A0A0R6PJY5	Moraxella_phage	7.0e-48	48.2
VEB71497.1\|2589141_2589897_-	Uncharacterized phage-encoded protein	A0A2L1IV39	Escherichia_phage	1.8e-68	51.6
VEB71500.1\|2589971_2590541_-	Uncharacterized phage-encoded protein	H6WRU8	Salmonella_phage	3.5e-32	51.8
VEB71503.1\|2590576_2590759_-	Uncharacterised protein	G9L6D7	Escherichia_phage	3.9e-14	69.2
VEB71506.1\|2590890_2591325_+	Arc-like DNA binding domain	G9L6D6	Escherichia_phage	7.2e-30	58.9
VEB71510.1\|2591774_2592179_-	Uncharacterised protein	NA	NA	NA	NA
VEB71514.1\|2592181_2592988_-	Uncharacterised protein	NA	NA	NA	NA
VEB71516.1\|2593270_2593555_-	Uncharacterised protein	F8UBV2	Escherichia_phage	1.1e-13	54.7
VEB71519.1\|2593572_2593875_-	Domain of uncharacterised function (DUF1789)	A0A0H5AUF4	Pseudomonas_phage	1.1e-08	37.6
VEB71522.1\|2593909_2594563_-\|tail	Phage tail protein	G8C7Q3	Escherichia_phage	8.2e-62	57.8
VEB71525.1\|2594611_2595013_-	Uncharacterised protein	NA	NA	NA	NA
VEB71528.1\|2595013_2595208_-	Uncharacterised protein	I6PCW1	Cronobacter_phage	2.5e-14	57.1
VEB71531.1\|2595254_2595593_-	Uncharacterised protein	G8C7Q1	Escherichia_phage	2.2e-26	60.2
VEB71534.1\|2595594_2595945_-	Uncharacterised protein	I6PD77	Cronobacter_phage	2.7e-19	43.4
VEB71537.1\|2595947_2596430_-	Uncharacterised protein	G8C7P9	Escherichia_phage	1.5e-31	44.3
VEB71540.1\|2596513_2597479_-	Uncharacterised protein	A0A1B0VMF8	Pseudomonas_phage	1.1e-126	71.9
VEB71543.1\|2597492_2598269_-	Uncharacterised protein	A0A1B0VMG1	Pseudomonas_phage	2.1e-64	58.0
VEB71546.1\|2598381_2599503_-	Uncharacterised protein	I6PD76	Cronobacter_phage	1.5e-103	50.0
VEB71549.1\|2599499_2600870_-	Uncharacterised protein	A0A1B0VMH0	Pseudomonas_phage	3.5e-123	50.1
VEB71552.1\|2600869_2601550_-	Uncharacterised protein	A0A1W6JNY3	Morganella_phage	1.9e-117	90.2
VEB71555.1\|2601677_2602358_-	Uncharacterised protein	I6PBN3	Cronobacter_phage	7.9e-108	87.5
VEB71556.1\|2602360_2602660_-	Uncharacterised protein	A0A2H4J2I6	uncultured_Caudovirales_phage	1.2e-20	51.5
VEB71559.1\|2602810_2603794_-	Integrase core domain	NA	NA	NA	NA
VEB71562.1\|2603841_2604324_-	Transposase	NA	NA	NA	NA
VEB71565.1\|2604605_2605121_-	Outer membrane lipoprotein blc precursor	A0A1W6JNX6	Morganella_phage	5.9e-79	81.3
VEB71568.1\|2605593_2605725_+	entericidin B membrane lipoprotein	NA	NA	NA	NA
VEB71571.1\|2605914_2606148_+	Protein of uncharacterised function (DUF1161)	NA	NA	NA	NA
VEB71574.1\|2606349_2606505_+	Uncharacterised protein	NA	NA	NA	NA
VEB71577.1\|2606904_2607375_-\|lysis	Bacteriophage lysis protein	A0A1P8DTG0	Proteus_phage	5.4e-31	48.1
VEB71580.1\|2607371_2607578_-	Uncharacterised protein	NA	NA	NA	NA
VEB71583.1\|2607574_2608159_-	Uncharacterised protein	Q9B021	Phage_GMSE-1	3.7e-21	73.2
VEB71586.1\|2608351_2608837_-	Uncharacterised protein	A0A1U9ZAE8	Proteus_phage	4.4e-60	73.1
VEB71589.1\|2608829_2609135_-	Uncharacterised protein	NA	NA	NA	NA
VEB71592.1\|2611031_2611349_-	Uncharacterised protein	M1PRT9	Cellulophaga_phage	9.0e-30	64.4
VEB71595.1\|2611492_2611888_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	2.2e-17	42.7
VEB71598.1\|2612005_2612386_-	Phage antitermination protein Q	A0A0P0ZGJ3	Escherichia_phage	5.1e-48	70.4
VEB71601.1\|2612508_2612967_-	Bacteriophage Lambda NinG protein	C6ZR60	Salmonella_phage	1.2e-64	76.2
VEB71604.1\|2612967_2613183_-	Uncharacterised protein	NA	NA	NA	NA
VEB71607.1\|2613179_2613629_-	Uncharacterised protein	A0A2I7R9W3	Vibrio_phage	3.4e-14	36.9
VEB71610.1\|2613814_2614057_-	Uncharacterised protein	NA	NA	NA	NA
VEB71613.1\|2614056_2614260_-	Uncharacterised protein	NA	NA	NA	NA
VEB71616.1\|2614259_2614550_-	Uncharacterised protein	A0A1X9Y877	Proteus_phage	1.3e-19	55.1
VEB71619.1\|2614575_2615946_-	Replicative DNA helicase	K7P852	Enterobacteria_phage	9.5e-169	66.6
VEB71622.1\|2615948_2616791_-	phage replication protein O, N-terminal domain	A0A0N7KZ97	Stx2-converting_phage	2.2e-59	45.8
VEB71625.1\|2616780_2616957_-	Uncharacterised protein	NA	NA	NA	NA
VEB71628.1\|2616981_2617308_-	Uncharacterised protein	A0A1W6JNY4	Morganella_phage	2.5e-43	79.6
VEB71631.1\|2617440_2617650_-	Helix-turn-helix	K7PKH4	Enterobacteria_phage	5.7e-25	77.9
VEB71634.1\|2617756_2618401_+	Uncharacterized HTH-type transcriptional regulator CBU_1416	K7PH19	Enterobacteria_phage	1.9e-74	62.3
VEB71637.1\|2618410_2618752_+	Protein of uncharacterised function (DUF3024)	A0A1W6JP12	Morganella_phage	1.4e-36	60.2
VEB71640.1\|2619087_2620011_+	Uncharacterised protein	A4KWU2	Enterobacteria_phage	3.7e-84	53.4
VEB71643.1\|2620084_2620318_+	Putative hemolysin	NA	NA	NA	NA
VEB71646.1\|2621436_2621910_-	Uncharacterised protein	NA	NA	NA	NA
VEB71649.1\|2622121_2622346_+	Uncharacterised protein	NA	NA	NA	NA
VEB71652.1\|2622453_2622636_+	Uncharacterised protein	A0A1P8DTH8	Proteus_phage	3.1e-19	80.0
VEB71654.1\|2622577_2622754_+	Uncharacterised protein	A0A1P8DTG5	Proteus_phage	2.0e-10	57.9
VEB71657.1\|2622763_2622979_+	Uncharacterised protein	NA	NA	NA	NA
VEB71660.1\|2622993_2623728_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	2.5e-67	68.7
VEB71663.1\|2623711_2624323_+	putative phage-type endonuclease	A0A0S2SY31	Pseudomonas_phage	7.2e-52	55.8
VEB71666.1\|2624322_2624736_+	Helix-destabilizing protein	A0A1W6JNW8	Morganella_phage	5.1e-49	71.7
VEB71670.1\|2624748_2625303_+	Uncharacterised protein	A0A2I7QTL0	Vibrio_phage	4.6e-29	37.3
VEB71673.1\|2625509_2625653_-	Uncharacterised protein	NA	NA	NA	NA
VEB71676.1\|2625759_2626275_+	Uncharacterised protein	W6MWX6	Pseudomonas_phage	1.2e-10	27.9
VEB71679.1\|2626274_2626475_+	Uncharacterised protein	NA	NA	NA	NA
VEB71682.1\|2626467_2626761_+	Uncharacterised protein	NA	NA	NA	NA
VEB71685.1\|2626753_2627122_+	Uncharacterised protein	NA	NA	NA	NA
VEB71688.1\|2627281_2627503_+	Uncharacterised protein	I6PBM8	Cronobacter_phage	1.4e-18	63.9
VEB71691.1\|2627457_2628630_+	Tyrosine recombinase XerC	I6PDJ1	Cronobacter_phage	3.4e-151	69.0

DBSCAN-SWA_5

2822581 : 2859909

Cronobacter_phage(32.35%)

head,holin,integrase,tail

attL 2822152:2822166|attR 2835148:2835162

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2822152:2822166	attL	NA	NA	NA	NA
VEB72252.1\|2822581_2823082_-\|integrase	Putative prophage CPS-53 integrase	E5AGD0	Erwinia_phage	2.8e-33	47.3
VEB72255.1\|2823441_2824590_-	Uncharacterised protein	NA	NA	NA	NA
VEB72258.1\|2824600_2825497_-	Uncharacterised protein	F1C5A8	Cronobacter_phage	5.0e-33	41.5
VEB72261.1\|2825558_2828033_-	Uncharacterised protein	F1C5A7	Cronobacter_phage	1.9e-228	47.8
VEB72264.1\|2828019_2828412_-	NlpC/P60 family	F1C5F2	Cronobacter_phage	4.3e-42	55.3
VEB72267.1\|2828411_2828879_-	Domain of uncharacterised function (DUF1833)	F1C5F1	Cronobacter_phage	2.3e-42	53.6
VEB72270.1\|2828875_2829361_-	Uncharacterised protein	F1C5F0	Cronobacter_phage	2.8e-59	67.1
VEB72272.1\|2829516_2829786_+	Domain of uncharacterised function (DUF1883)	NA	NA	NA	NA
VEB72275.1\|2829768_2829942_-	Uncharacterised protein	NA	NA	NA	NA
VEB72277.1\|2829960_2833458_-\|tail	Phage-related minor tail protein	A0A1W6JNU2	Morganella_phage	8.3e-177	40.7
VEB72280.1\|2833559_2834081_-	Uncharacterised protein	A0A0P0IYG9	Acinetobacter_phage	1.3e-06	35.5
VEB72283.1\|2834342_2835074_-	Uncharacterised protein	NA	NA	NA	NA
VEB72285.1\|2835092_2835443_-	Uncharacterised protein	NA	NA	NA	NA
2835148:2835162	attR	NA	NA	NA	NA
VEB72288.1\|2835665_2836355_-	Uncharacterised protein	A0A1W6JNX2	Morganella_phage	4.3e-61	54.7
VEB72290.1\|2836403_2837144_-	Bacterial Ig-like domain (group 2)	G0ZNE6	Cronobacter_phage	8.8e-52	46.3
VEB72292.1\|2837205_2837574_-	Uncharacterised protein	NA	NA	NA	NA
VEB72295.1\|2837570_2838008_-	Uncharacterised protein	A0A1V0E5P5	Salmonella_phage	9.2e-33	56.1
VEB72300.1\|2838009_2838378_-	Uncharacterised protein	A0A1V0E5P3	Salmonella_phage	3.0e-37	63.1
VEB72303.1\|2838374_2838746_-	Uncharacterised protein	A0A0M3LQS8	Mannheimia_phage	9.2e-18	45.0
VEB72305.1\|2838729_2838939_-	Uncharacterised protein	NA	NA	NA	NA
VEB72308.1\|2838948_2840013_-	Uncharacterised protein	F1C5E1	Cronobacter_phage	1.5e-140	68.0
VEB72310.1\|2840023_2840464_-	Uncharacterised protein	F1C5E0	Cronobacter_phage	3.9e-39	62.0
VEB72313.1\|2840467_2841859_-	Uncharacterised protein	F1C5D9	Cronobacter_phage	4.9e-112	52.1
VEB72316.1\|2841871_2842882_-\|head	phage head morphogenesis protein, SPP1 gp7 family	F1C5D8	Cronobacter_phage	3.0e-103	61.6
VEB72320.1\|2842835_2844278_-	Uncharacterised protein	F1C5D7	Cronobacter_phage	1.4e-154	61.1
VEB72323.1\|2844290_2845550_-	Terminase-like family	A0A2P1MXD8	Escherichia_phage	4.1e-150	61.5
VEB72324.1\|2845519_2846464_-	Terminase small subunit	Q5QF76	Pseudomonas_virus	4.1e-38	42.7
VEB72327.1\|2846524_2846785_-	Protein of uncharacterised function (DUF2560)	NA	NA	NA	NA
VEB72330.1\|2846951_2847191_+	Uncharacterised protein	NA	NA	NA	NA
VEB72333.1\|2847199_2847889_-	Uncharacterized phage-encoded protein	Q5G8R0	Enterobacteria_phage	2.3e-91	70.7
VEB72336.1\|2848175_2848340_-	Uncharacterised protein	NA	NA	NA	NA
VEB72339.1\|2848336_2848636_-	Uncharacterised protein	A0A1W6JP52	Morganella_phage	2.0e-10	62.3
VEB72342.1\|2848837_2849254_-	Uncharacterised protein	A0A0A1IX72	Pseudomonas_phage	4.2e-35	55.2
VEB72344.1\|2849246_2849564_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	2.2e-36	68.6
VEB72347.1\|2850018_2850630_-	Uncharacterised protein	A0A2H4JCH5	uncultured_Caudovirales_phage	4.3e-44	49.7
VEB72350.1\|2850626_2850842_-	Uncharacterised protein	NA	NA	NA	NA
VEB72352.1\|2850994_2851588_-	Bacteriophage Lambda NinG protein	K7PHP1	Enterobacterial_phage	7.7e-67	64.6
VEB72355.1\|2851580_2851733_-	Uncharacterised protein	NA	NA	NA	NA
VEB72358.1\|2851729_2851897_-	Uncharacterised protein	NA	NA	NA	NA
VEB72361.1\|2852079_2852514_-	Protein of uncharacterised function (DUF1367)	A0A096XEN2	Escherichia_phage	6.7e-52	65.5
VEB72364.1\|2852535_2852745_-	Uncharacterised protein	A0A1X9Y878	Proteus_phage	1.6e-22	70.3
VEB72367.1\|2852916_2853108_-	Uncharacterised protein	NA	NA	NA	NA
VEB72370.1\|2853107_2853332_-	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA
VEB72373.1\|2853318_2853528_-	Uncharacterised protein	NA	NA	NA	NA
VEB72376.1\|2853578_2853752_-	Uncharacterised protein	NA	NA	NA	NA
VEB72379.1\|2853777_2855148_-	Replicative DNA helicase	K7P852	Enterobacteria_phage	5.2e-167	65.5
VEB72382.1\|2855150_2856014_-	Uncharacterised protein	G9L680	Escherichia_phage	2.1e-57	44.1
VEB72386.1\|2856063_2856234_-	Uncharacterised protein	NA	NA	NA	NA
VEB72389.1\|2856282_2856630_-	Uncharacterised protein	NA	NA	NA	NA
VEB72391.1\|2856736_2856955_-	Uncharacterized protein conserved in bacteria, prophage-related	A0A2D1GLN0	Escherichia_phage	1.9e-18	66.7
VEB72394.1\|2857062_2857791_+	Uncharacterized HTH-type transcriptional regulator HI_1476	A0A2H4FNG6	Salmonella_phage	1.1e-57	52.9
VEB72398.1\|2857824_2858160_+	Protein of uncharacterised function (DUF3024)	A0A1W6JP12	Morganella_phage	5.0e-23	50.4
VEB72400.1\|2858200_2858773_+	Uncharacterised protein	NA	NA	NA	NA
VEB72401.1\|2858765_2859656_+	Uncharacterised protein	NA	NA	NA	NA
VEB72404.1\|2859702_2859909_-	Uncharacterised protein	K7P7I0	Enterobacteria_phage	2.9e-05	47.5

DBSCAN-SWA_6

2863304 : 2872323

Proteus_phage(30.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB72420.1\|2863304_2863520_+	Uncharacterised protein	A0A1P8DTG4	Proteus_phage	1.6e-06	49.1
VEB72423.1\|2863521_2863800_+	Uncharacterised protein	A0A1P8DTE8	Proteus_phage	2.8e-27	67.0
VEB72426.1\|2863864_2864809_+	Uncharacterised protein	A0A2I7R804	Vibrio_phage	2.1e-18	43.7
VEB72429.1\|2864936_2865065_+	Uncharacterised protein	NA	NA	NA	NA
VEB72432.1\|2865061_2865262_+	Uncharacterised protein	NA	NA	NA	NA
VEB72435.1\|2865258_2865465_+	Uncharacterised protein	NA	NA	NA	NA
VEB72438.1\|2865461_2866286_+	Exodeoxyribonuclease 8	A0A0M5M5Y6	Salmonella_phage	1.3e-104	66.8
VEB72441.1\|2866285_2866864_+	Uncharacterised protein	A0A0M4RD07	Salmonella_phage	1.4e-60	63.3
VEB72444.1\|2866856_2867297_+	Helix-destabilizing protein	A0A0A0P1Q9	Enterobacteria_phage	2.8e-45	71.6
VEB72447.1\|2867357_2867516_+	Uncharacterised protein	NA	NA	NA	NA
VEB72450.1\|2867550_2867862_+	Uncharacterised protein	NA	NA	NA	NA
VEB72453.1\|2867861_2868134_+	Uncharacterised protein	NA	NA	NA	NA
VEB72456.1\|2868469_2868709_+	Uncharacterised protein	NA	NA	NA	NA
VEB72459.1\|2868701_2869034_+	Protein of uncharacterised function (DUF2591)	A0A1P8DTH6	Proteus_phage	7.0e-09	40.6
VEB72462.1\|2869023_2869569_+	phage N-6-adenine-methyltransferase	A0A1W6JP96	Morganella_phage	3.5e-58	59.8
VEB72465.1\|2869576_2869819_+	Uncharacterised protein	NA	NA	NA	NA
VEB72468.1\|2870020_2871178_+	site-specific tyrosine recombinase XerC	A0A0M4R586	Salmonella_phage	2.0e-172	75.8
VEB72471.1\|2871437_2871926_+	Bifunctional protein FolD	NA	NA	NA	NA
VEB72475.1\|2871864_2872323_+	Bifunctional protein FolD	A0A249XZQ2	Enterococcus_phage	2.2e-21	42.4

DBSCAN-SWA_7

3045707 : 3052929

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB74345.1\|3045707_3048275_+	DNA mismatch repair protein mutS	A0A1V0SC35	Catovirus	9.5e-29	21.2
VEB74348.1\|3048276_3049038_+\|tRNA	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	NA	NA	NA	NA
VEB74351.1\|3049112_3050099_-	RNA polymerase sigma factor rpoS	M4SMP8	Cyanophage	1.0e-31	33.3
VEB74353.1\|3050153_3051215_-	Murein hydrolase activator NlpD precursor	D7RWE0	Brochothrix_phage	1.4e-05	35.2
VEB74356.1\|3051543_3052170_-	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.2e-39	48.6
VEB74359.1\|3052166_3052460_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	7.8e-20	48.3
VEB74362.1\|3052428_3052929_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.6e-36	54.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134189

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection