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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134191 Escherichia coli strain NCTC5934 genome assembly, chromosome: 1 9 crisprs csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,c2c9_V-U4,DinG,RT 1 15 20 0

Results visualization

1. LR134191
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_1 994035-994307 Unclear I-E
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_2 1019094-1019671 TypeI-E I-E
9 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_3 1543536-1543653 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_4 2202333-2202456 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_6 3053416-3053559 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_7 3200916-3201060 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_8 3439968-3440064 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_9 3574197-3574341 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134191_10 3757464-3757605 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
LR134191_10 10.1|3757505|60|LR134191|CRISPRCasFinder 3757505-3757564 60 LR134191.1 3758247-3758306 1 0.983

1. spacer 10.1|3757505|60|LR134191|CRISPRCasFinder matches to position: 3758247-3758306, mismatch: 1, identity: 0.983

tgataagacgcgtcagcgtcgcatcaggcatctgcgcataaccgccggatgcggcgtaaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctgcgcacaaccgccggatgcggcgtaaa	Protospacer
**************************************.*********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
LR134191_5 5.1|2911827|40|LR134191|CRISPRCasFinder 2911827-2911866 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11833-11866 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36518-36551 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9504-9537 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65532-65565 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64163-64196 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119282-119315 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85097-85130 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42114-42147 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87235-87268 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70498-70531 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62995-63028 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 MH422554 Escherichia phage P1, complete genome 87192-87225 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NC_050152 Enterobacteria phage P7, complete genome 93993-94026 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58643-58676 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 MH445381 Escherichia virus P1, complete genome 56868-56901 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42180 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1590 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94789 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61949 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20319 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46721 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81886 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47894 1 0.971
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NC_031129 Salmonella phage SJ46, complete genome 77363-77396 1 0.971
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 71166-71197 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 71579-71610 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 57771-57802 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 49237-49268 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 80644-80675 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 43940-43971 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 30387-30418 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_MH257954 Escherichia coli strain 104 plasmid pHXH-2, complete sequence 71853-71884 2 0.938
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 CP053388 Escherichia phage CMS-2020a, complete sequence 69160-69191 2 0.938
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
LR134191_2 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT 1019611-1019642 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
LR134191_4 4.1|2202376|38|LR134191|CRISPRCasFinder 2202376-2202413 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 57769-57802 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 49235-49268 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 30385-30418 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 71166-71199 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 71579-71612 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 80644-80677 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 43940-43973 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 NZ_MH257954 Escherichia coli strain 104 plasmid pHXH-2, complete sequence 71853-71886 3 0.912
LR134191_2 2.17|1019550|34|LR134191|PILER-CR 1019550-1019583 34 CP053388 Escherichia phage CMS-2020a, complete sequence 69160-69193 3 0.912
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17438-17471 3 0.912
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122308-122341 3 0.912
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6027-6060 3 0.912
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131400-131433 3 0.912
LR134191_2 2.18|1019611|34|LR134191|PILER-CR 1019611-1019644 34 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15154 3 0.912
LR134191_2 2.4|1019306|32|LR134191|CRISPRCasFinder,CRT 1019306-1019337 32 NZ_CP011408 Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence 35508-35539 5 0.844
LR134191_2 2.4|1019306|32|LR134191|CRISPRCasFinder,CRT 1019306-1019337 32 NZ_CP054046 Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence 31692-31723 6 0.812
LR134191_2 2.13|1019306|34|LR134191|PILER-CR 1019306-1019339 34 NZ_CP011408 Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence 35508-35541 6 0.824
LR134191_2 2.3|1019245|32|LR134191|CRISPRCasFinder,CRT 1019245-1019276 32 NZ_LN907828 Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence 481341-481372 7 0.781
LR134191_2 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT 1019367-1019398 32 NC_009620 Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence 897526-897557 7 0.781
LR134191_2 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT 1019367-1019398 32 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 585720-585751 7 0.781
LR134191_2 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT 1019367-1019398 32 NZ_CP021367 Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence 89866-89897 7 0.781
LR134191_2 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT 1019367-1019398 32 NZ_CP021649 Acidovorax sp. T1 plasmid p1-T1, complete sequence 97239-97270 7 0.781
LR134191_2 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT 1019367-1019398 32 NZ_CP021363 Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence 75914-75945 7 0.781
LR134191_1 1.4|994247|32|LR134191|CRISPRCasFinder,CRT 994247-994278 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
LR134191_2 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT 1019367-1019398 32 NZ_CP011054 Halomonas sp. KO116 plasmid unnamed2, complete sequence 177867-177898 8 0.75
LR134191_2 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT 1019428-1019459 32 NZ_CP046399 Bacillus sp. A260 plasmid unnamed11, complete sequence 34220-34251 8 0.75
LR134191_2 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT 1019428-1019459 32 NZ_CP018742 Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence 13805-13836 8 0.75
LR134191_2 2.13|1019306|34|LR134191|PILER-CR 1019306-1019339 34 NZ_CP054046 Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence 31692-31725 8 0.765
LR134191_2 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT 1019428-1019459 32 MT028491 Ochrobactrum phage vB_OspM_OC, complete genome 50790-50821 9 0.719
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 NZ_CP011009 Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence 147371-147402 9 0.719
LR134191_2 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT 1019550-1019581 32 MN693961 Marine virus AFVG_250M531, complete genome 39943-39974 9 0.719
LR134191_2 2.14|1019367|34|LR134191|PILER-CR 1019367-1019400 34 NC_009620 Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence 897526-897559 9 0.735
LR134191_2 2.14|1019367|34|LR134191|PILER-CR 1019367-1019400 34 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 585718-585751 9 0.735
LR134191_2 2.14|1019367|34|LR134191|PILER-CR 1019367-1019400 34 NZ_CP021367 Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence 89864-89897 9 0.735
LR134191_2 2.14|1019367|34|LR134191|PILER-CR 1019367-1019400 34 NZ_CP021649 Acidovorax sp. T1 plasmid p1-T1, complete sequence 97237-97270 9 0.735
LR134191_2 2.14|1019367|34|LR134191|PILER-CR 1019367-1019400 34 NZ_CP021363 Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence 75912-75945 9 0.735
LR134191_2 2.15|1019428|34|LR134191|PILER-CR 1019428-1019461 34 NZ_CP046399 Bacillus sp. A260 plasmid unnamed11, complete sequence 34220-34253 9 0.735
LR134191_2 2.15|1019428|34|LR134191|PILER-CR 1019428-1019461 34 NZ_CP018742 Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence 13803-13836 9 0.735
LR134191_2 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT 1019428-1019459 32 NZ_CP020079 Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence 149847-149878 10 0.688
LR134191_2 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT 1019428-1019459 32 NZ_CP013487 Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence 225034-225065 10 0.688
LR134191_2 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT 1019428-1019459 32 NZ_CP019295 Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence 148571-148602 10 0.688
LR134191_9 9.1|3574240|59|LR134191|CRISPRCasFinder 3574240-3574298 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
LR134191_9 9.1|3574240|59|LR134191|CRISPRCasFinder 3574240-3574298 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814

1. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 5.1|2911827|40|LR134191|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

26. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

27. spacer 2.18|1019611|34|LR134191|PILER-CR matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

28. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

29. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

30. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

31. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

32. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

33. spacer 2.18|1019611|34|LR134191|PILER-CR matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

34. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

35. spacer 2.18|1019611|34|LR134191|PILER-CR matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

36. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

37. spacer 2.18|1019611|34|LR134191|PILER-CR matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

38. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

39. spacer 2.18|1019611|34|LR134191|PILER-CR matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

40. spacer 2.18|1019611|34|LR134191|PILER-CR matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

41. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

42. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

43. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

44. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

45. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

46. spacer 2.18|1019611|34|LR134191|PILER-CR matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

47. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

48. spacer 2.18|1019611|34|LR134191|PILER-CR matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

49. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

50. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

51. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

52. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

53. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

54. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

55. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

56. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

57. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

58. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

59. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

60. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

61. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

62. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

63. spacer 2.9|1019611|32|LR134191|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

64. spacer 4.1|2202376|38|LR134191|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

65. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

66. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

67. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

68. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

69. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

70. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

71. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

72. spacer 2.17|1019550|34|LR134191|PILER-CR matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

73. spacer 2.17|1019550|34|LR134191|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

74. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

75. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

76. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

77. spacer 2.18|1019611|34|LR134191|PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgttt	Protospacer
************ * ***************** *

78. spacer 2.18|1019611|34|LR134191|PILER-CR matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

79. spacer 2.4|1019306|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 5, identity: 0.844

agattggttttccagtctttggcggttggcaa	CRISPR spacer
agattggttttccagtctttcgcggtcggagt	Protospacer
******************** *****.** . 

80. spacer 2.4|1019306|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agattggttttccagtctttggcggttggcaa	CRISPR spacer
aagttggttttccagtctttggcggtcgggtt	Protospacer
*..***********************.**   

81. spacer 2.13|1019306|34|LR134191|PILER-CR matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 6, identity: 0.824

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
agattggttttccagtctttcgcggtcggagtga	Protospacer
******************** *****.** . * 

82. spacer 2.3|1019245|32|LR134191|CRISPRCasFinder,CRT matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 7, identity: 0.781

-cttataaccggcggcaaaaatcgtcgcgttgg	CRISPR spacer
gcagacaa-aggcggcaaaaatagtcgcgctgg	Protospacer
 *  *.**  ************ ******.***

83. spacer 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ttacgccggtatcccgctccctgttcagccga	Protospacer
.*..******* *** **************  

84. spacer 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

85. spacer 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

86. spacer 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

87. spacer 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

88. spacer 1.4|994247|32|LR134191|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **  

89. spacer 2.5|1019367|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP011054 (Halomonas sp. KO116 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtgc---cggtagccccctccctgttcagcctc	CRISPR spacer
---tgcgagcggtaacccccaccctgttcagctct	Protospacer
   ***   *****.***** ***********...

90. spacer 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *  

91. spacer 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *  

92. spacer 2.13|1019306|34|LR134191|PILER-CR matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
aagttggttttccagtctttggcggtcgggttaa	Protospacer
*..***********************.**   . 

93. spacer 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 9, identity: 0.719

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tcgtttagagtggtgtattcaaaatctttgac	Protospacer
*  *******  **************    * 

94. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP011009 (Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence) position: , mismatch: 9, identity: 0.719

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
ttatctttaattattgagatgatgctccgcat	Protospacer
 * ************ ** *******..  * 

95. spacer 2.8|1019550|32|LR134191|CRISPRCasFinder,CRT matches to MN693961 (Marine virus AFVG_250M531, complete genome) position: , mismatch: 9, identity: 0.719

atttcttt-----aattatttagctgatgcttttaaa	CRISPR spacer
-----tatgaaagaattatttagctgatgcagttaag	Protospacer
     * *     *****************  ****.

96. spacer 2.14|1019367|34|LR134191|PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ttacgccggtatcccgctccctgttcagccgacc	Protospacer
.*..******* *** **************   .

97. spacer 2.14|1019367|34|LR134191|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

98. spacer 2.14|1019367|34|LR134191|PILER-CR matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

99. spacer 2.14|1019367|34|LR134191|PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

100. spacer 2.14|1019367|34|LR134191|PILER-CR matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

101. spacer 2.15|1019428|34|LR134191|PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

102. spacer 2.15|1019428|34|LR134191|PILER-CR matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

103. spacer 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *. 

104. spacer 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *. 

105. spacer 2.6|1019428|32|LR134191|CRISPRCasFinder,CRT matches to NZ_CP019295 (Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *. 

106. spacer 9.1|3574240|59|LR134191|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

107. spacer 9.1|3574240|59|LR134191|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 162359 : 230013 54 Escherichia_phage(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_2 747861 : 777482 34 uncultured_virus(66.67%) protease,transposase NA
DBSCAN-SWA_3 1033138 : 1040278 6 Escherichia_phage(83.33%) tRNA NA
DBSCAN-SWA_4 1124170 : 1144680 20 Shigella_phage(25.0%) integrase,transposase attL 1119152:1119165|attR 1146070:1146083
DBSCAN-SWA_5 1539810 : 1545957 8 Pseudomonas_phage(33.33%) NA NA
DBSCAN-SWA_6 1673393 : 1682837 12 Enterobacteria_phage(88.89%) NA NA
DBSCAN-SWA_7 1772729 : 1779026 6 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_8 1824484 : 1879442 53 Escherichia_phage(20.0%) transposase NA
DBSCAN-SWA_9 1899553 : 1943468 47 Helicobacter_phage(10.0%) integrase,transposase attL 1923303:1923317|attR 1932656:1932670
DBSCAN-SWA_10 2015828 : 2066395 51 Moraxella_phage(25.0%) protease,transposase,tail NA
DBSCAN-SWA_11 2276211 : 2331143 62 Enterobacteria_phage(45.0%) portal,lysis,tail,head,protease,coat,terminase,transposase,capsid NA
DBSCAN-SWA_12 2446956 : 2509772 59 Moraxella_phage(15.38%) transposase NA
DBSCAN-SWA_13 2538458 : 2581410 53 Escherichia_phage(38.46%) lysis,tail,coat,integrase,tRNA,terminase,transposase attL 2561842:2561857|attR 2587007:2587022
DBSCAN-SWA_14 2643281 : 2698640 58 Acinetobacter_phage(18.18%) integrase,protease,transposase attL 2696234:2696247|attR 2701770:2701783
DBSCAN-SWA_15 3158963 : 3199431 59 Enterobacteria_phage(47.37%) integrase,transposase,lysis attL 3166577:3166591|attR 3207918:3207932
DBSCAN-SWA_16 3389917 : 3430520 37 Macacine_betaherpesvirus(33.33%) transposase NA
DBSCAN-SWA_17 3652473 : 3694983 38 Vibrio_phage(14.29%) integrase,holin,transposase attL 3689186:3689205|attR 3695670:3695689
DBSCAN-SWA_18 3700643 : 3747490 57 Enterobacteria_phage(32.65%) portal,tail,lysis,head,protease,integrase,terminase,transposase attL 3695670:3695716|attR 3743588:3743634
DBSCAN-SWA_19 4056886 : 4135575 78 Shigella_phage(33.33%) integrase,tRNA,transposase attL 4082160:4082175|attR 4138205:4138220
DBSCAN-SWA_20 4502775 : 4556630 59 Erwinia_phage(14.29%) protease,transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage