CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134205	Proteus mirabilis strain NCTC4199 genome assembly, chromosome: 1	1 crisprs	c2c9_V-U4,cas3,DEDDh,DinG,cas14i,PD-DExK,csa3,WYL	0	1	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134205_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134205_1

178462-178557

Orphan

Consensus_repeat	Method
ATAGCTTAGAAAAATAAGTACTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134205_1

>merge|LR134205|1|178462-178557|CRISPRCasFinder
ATAGCTTAGAAAAATAAGTACTAATATATTTTAAAAGATAAAACAGAATATAAGTTTATTATCTTGAAATAGATAGCTTAGAAAAATAAGTGCTAA

>LR134205|1|1|178462-178557|CRISPRCasFinder
ATAGCTTAGAAAAATAAGTACTAA	TATATTTTAAAAGATAAAACAGAATATAAGTTTATTATCTTGAAATAG
ATAGCTTAGAAAAATAAGTGCTAA

Protein	Signature genes	Signature genes Name	Protein_function
LR134205.1\|VEB81397.1\|179299_181321_+\|ATP-dependent-DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|182838
LR134205.1\|VEB81379.1\|172400_174251_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
LR134205.1\|VEB81364.1\|167259_168792_-\|magnesium-chelatase	unknown	unknown	gnl\|CDD\|182120
LR134205.1\|VEB81403.1\|182907_184206_-\|ATP-dependent-RNA-helicase-RhlB	unknown	unknown	gnl\|CDD\|235314
LR134205.1\|VEB81388.1\|176874_178350_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235368
LR134205.1\|VEB81358.1\|165933_166758_-\|transcriptional-regulator-HdfR	unknown	unknown	gnl\|CDD\|235137
LR134205.1\|VEB81373.1\|171401_172328_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|235841
LR134205.1\|VEB81394.1\|178878_179127_-\|plasmid-like-protein	unknown	unknown	unknown
LR134205.1\|VEB81367.1\|169466_171116_+\|Acetolactate-synthase-isozyme-II-large-subunit	unknown	unknown	gnl\|CDD\|181601
LR134205.1\|VEB81418.1\|189171_190302_+\|UDP-N-acetylglucosamine-2-epimerase	unknown	unknown	gnl\|CDD\|223458
LR134205.1\|VEB81391.1\|178608_178878_-\|plasmid-stability-protein	unknown	unknown	gnl\|CDD\|379750
LR134205.1\|VEB81400.1\|181395_182904_-\|guanosine-pentaphosphate-phosphohydrolase	unknown	unknown	gnl\|CDD\|236826
LR134205.1\|VEB81361.1\|166873_167212_+\|Uncharacterized-protein-conserved-in-bacteria	unknown	unknown	gnl\|CDD\|236825
LR134205.1\|VEB81406.1\|184325_184652_+\|thioredoxin	unknown	unknown	gnl\|CDD\|181812
LR134205.1\|VEB81412.1\|186882_187959_+\|undecaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|237913
LR134205.1\|VEB81370.1\|171112_171391_+\|acetolactate-synthase-isozyme-II-small-subunit	unknown	unknown	gnl\|CDD\|236862
LR134205.1\|VEB81415.1\|187982_189041_+\|lipopolysaccharide-biosynthesis-protein-WzzE	unknown	unknown	gnl\|CDD\|236943
LR134205.1\|VEB81385.1\|175814_176702_-\|DNA-binding-transcriptional-regulator-IlvY	unknown	unknown	gnl\|CDD\|236961
LR134205.1\|VEB81382.1\|174254_175829_+\|threonine-dehydratase	unknown	unknown	gnl\|CDD\|236417
LR134205.1\|VEB81409.1\|185213_186473_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490

Protein	Function_ID	Function_description	E-value
LR134205.1\|VEB81397.1\|179299_181321_+\|ATP-dependent-DNA-helicase-Rep	gnl\|CDD\|182838	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional.	0
LR134205.1\|VEB81379.1\|172400_174251_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
LR134205.1\|VEB81364.1\|167259_168792_-\|magnesium-chelatase	gnl\|CDD\|182120	PRK09862, PRK09862, ATP-dependent protease.	0
LR134205.1\|VEB81403.1\|182907_184206_-\|ATP-dependent-RNA-helicase-RhlB	gnl\|CDD\|235314	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional.	0
LR134205.1\|VEB81388.1\|176874_178350_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235368	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated.	0
LR134205.1\|VEB81358.1\|165933_166758_-\|transcriptional-regulator-HdfR	gnl\|CDD\|235137	PRK03601, PRK03601, HTH-type transcriptional regulator HdfR.	1.01527e-167
LR134205.1\|VEB81373.1\|171401_172328_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
LR134205.1\|VEB81415.1\|187982_189041_+\|lipopolysaccharide-biosynthesis-protein-WzzE	gnl\|CDD\|236943	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein.	0
LR134205.1\|VEB81367.1\|169466_171116_+\|Acetolactate-synthase-isozyme-II-large-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0
LR134205.1\|VEB81418.1\|189171_190302_+\|UDP-N-acetylglucosamine-2-epimerase	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
LR134205.1\|VEB81391.1\|178608_178878_-\|plasmid-stability-protein	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.15858e-41
LR134205.1\|VEB81400.1\|181395_182904_-\|guanosine-pentaphosphate-phosphohydrolase	gnl\|CDD\|236826	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase.	0
LR134205.1\|VEB81361.1\|166873_167212_+\|Uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|236825	PRK11027, PRK11027, hypothetical protein; Provisional.	1.02914e-69
LR134205.1\|VEB81406.1\|184325_184652_+\|thioredoxin	gnl\|CDD\|181812	PRK09381, trxA, thioredoxin TrxA.	1.85797e-62
LR134205.1\|VEB81412.1\|186882_187959_+\|undecaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|237913	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase.	0
LR134205.1\|VEB81370.1\|171112_171391_+\|acetolactate-synthase-isozyme-II-small-subunit	gnl\|CDD\|236862	PRK11152, ilvM, acetolactate synthase 2 small subunit.	3.08752e-35
LR134205.1\|VEB81385.1\|175814_176702_-\|DNA-binding-transcriptional-regulator-IlvY	gnl\|CDD\|236961	PRK11716, PRK11716, HTH-type transcriptional activator IlvY.	0
LR134205.1\|VEB81382.1\|174254_175829_+\|threonine-dehydratase	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
LR134205.1\|VEB81409.1\|185213_186473_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0

>LR134205.1|VEB81388.1|176874_178350_+|ketol-acid-reductoisomerase
MANYFNTLNLRQQLSQLGKCRFMSRDEFADEANYLKGKKVVIVGCGAQGLNQGLNMRDSGLDIAYALRQEAIDEKRASWRRATENGFEVGTYEALIPQADLVVNLTPDKQHSAVVQAVQPLMKSGAALGYSHGFNIVEVGEKIRDDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDAKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCYDKMVAEGVEPGYAGKLIQFGWETITEALKQGGITLMMDRLSNPAKMRAYALSEQLKGIMAPLFAKHMDDIISGKFSETMMADWANDDKNLLTWREETGASAFENYPEYEGKISEQEYFDHGVLMVAMVKAGVELAFDTMIEAGIIAESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSFAAVPMLKEFMTTLQSGDLAKHVPDSGTDNAQLRDINEAIRQHPIEIVGKKLRGYMTDMKKIAVAN
>LR134205.1|VEB81385.1|175814_176702_-|DNA-binding-transcriptional-regulator-IlvY
MDIRDLKLFLHLAESCHFTKTAQAMHVSPSTLSRQIQRLEEQLGHPLFLRDNRQVTLTDAGEQLKRYAQHTLLQYKQLKHTLNQNSPSLSGELRLFCSVTAAYSHLPPILDRFRAENPLVEIKLTTGDAADAVDKVISDEADLGIAGKPEKLPENICFEKIGEIPLVLIAPALPGNVRHLATQEKPDWLNIPFIIPEHGPSRQRIALWFKRHRIQNPLIYATVSGHEAIVSMVALGCGIALIPQVVVDNCPEPVRNRISLLDNISLVEPFELGVCGLHKRLQEPVISAFWRLLHH
>LR134205.1|VEB81382.1|174254_175829_+|threonine-dehydratase
MAAFRPLTSAPSSAEYLKAALSAPVYEAAVVTPLQEMAKISQRLENTILVKREDRQPVHSFKLRGAYNMIAGLTPEQKAKGVVTASAGNHAQGVALSANRMGVKALIVMPIATADIKVDAVRQFGGEALLYGANFDEAKAKAIALAKEMGYTFVPPFDHPAVIAGQATLAMELLQQDVHLDRIFVPVGGGGLIAGVAVLIKQLMPEIKIIGVEAEDAACLKAALEAGHPVELPRVGLFAEGVAVKRIGDETFRLCQKYVDDVITVDSDAICAAVKDLFEDVRAIAEPSGALALAGLKKYVEEHQIKGERLAHVLSGANVNFHGLRYVSERCELGEKREALFAVTIPEQKGSFLRFCQILGQRVVTEFNYRYSDADPENARIFVGVRLSQGLQERKEIVQQLTEAGYQVSDLSDDEMAKLHVRYMVGGRPNQPLKERLFSFEFPEAPGALMKFLKTLGTYWNITLFHYRSHGTDYGRVLVAFELPETEGRFERHLDALGYEYHDETGNPSFQLFLSPQTASLVVE
>LR134205.1|VEB81379.1|172400_174251_+|dihydroxy-acid-dehydratase
MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQLIKLDLVDAMIQGANPNVSDADSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKTLFINAGKRIVELTKRYYEQDDLSALPRNIAKKEAFENAMILDIAMGGSTNTVLHLLAAAQEGDVDFKMEDIDRLSRQVPHLCKVAPSTQKYHMEDVHRAGGVMGILGELDRAGLLNRNVNNILGLSLPETLAQYDVMLSQDEQVKSMYQAGPAGIRTTKAFSQDCRWPTLDTDREQGCIRSKAHAYSQDGGLAVLSGNLAQDGCIVKTAGVDEDNLVFSGPAKVYESQDDAVEAILGGKVVAGDVVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAANGGIIGLVEEGDIVDINIPNREINLRVDEKTLAARREAQLARGDKAWTPKDRQRQVSFALRAYASLATSADKGAVRDKSKLGG
>LR134205.1|VEB81373.1|171401_172328_+|branched-chain-amino-acid-aminotransferase
MTKQADYIWFNGEMVPWAEAKVHVMSHALHYGTSVFEGVRCYDSHKGPVVFRHREHMQRLHDSAKIYRMPVAQSVDELMEACRETLRKNQLVSAYIRPLVFIGDVGMGVNPPEGYKTDIIIAAFPWGAYLGEEALDKGIDAMVSSWHRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVHGYLSEGAGENLFEVKDGVIFTPPFTSSALPGITRDAIIKLAKDLGYEIREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGIGRCGPVTKAIQKAFFGLFTGETEDKYGWLDPVNP
>LR134205.1|VEB81370.1|171112_171391_+|acetolactate-synthase-isozyme-II-small-subunit
MNQHNITIEARFCPEILERILRVIRHRGFHICSMNMNITESNYINLALTVSSQRPVDLLCSQLTKLADVAGIQVLHQQQKEKLQFISALSAM
>LR134205.1|VEB81367.1|169466_171116_+|Acetolactate-synthase-isozyme-II-large-subunit
MNGAQWLVQALRKQRVETVFGYPGGAIMPVYDALYDGGVEHVLCRHEQGAAIAAIGFARSTGTTGVCIATSGPGATNVITGLADALLDSVPVVAITGQVASNLIGTDAFQEVDVLGLSLACTKHSFLVSDVNELPRVVSEAFSIAKQGRPGPVLIDITKDVQLADASHLADYPLPQEQEFPYPEHEIAQALQMLAQAKKPILYVGGGVAMSQGVEALRSFVKQTQIPVVSTLKGLGCANAFDANYLGMLGMHGTKAANYAVQRSDLLIAVGARFDDRVTGRLNTFAPNAKVIHIDIDYAELNKLKQAHIALLGDAKVLLPKLSQPLAIEAWQEEVQQLIAEYAWRYDHPGEAIYAPLLLKQLSDAKPENSIVTTDVGQHQMWSAQHMTFDAPENFITSSGLGTMGFGIPAAIGAQIARPDACVICVSGDGSFMMNVQELGTIKRKQLPIKLVLLDNQRLGMVRQWQELFFEQRYSETILTDNPDFVALAKAFDIPGQRITEKAQVAEAIKCLLTSDGPYLLQVSIDDAENVWPLVPPGASNDEMMEKSK
>LR134205.1|VEB81364.1|167259_168792_-|magnesium-chelatase
MALAVIYTRASLGISAPLITIEAHISQGLPGLTLVGLPETVVKEAKDRVRSALINSGYSYPAKRITINLSPADLPKEGARYDLPIALAILIASEQLISDKLNSYEFIGELALSGKLQKVNAVIPSILSANKDNRISIISIEHQSEVSLLPNKSALLASHLLDICHHLENNTPLIEAKNNINHKTIENQNNKDISDIIGQNNAKRAAEITAAGNHNILFLGPPGTGKTMLAQRINTLLPPLTAKEALDVLIISSLSNTIHHDGKWPLRPFRAPHHTASAVALTGGGSIPKPGEITLAHHGILFLDELPEFDRRVLDALREPLDARKITISRAKAKISYPANVLLVGALNPSPTGHYQGTHNRTPVKQVLRYLSKVSGPFLDRFDLSVEMPLLPQGALLQSTHTNESSSIIRSRVLQARERQFQRSGKLNTYLSSKEIEHFCQLHTEDALFLEETLNKLGLSIRAWHKILRVSRTIADLENEQKIQRNHLIEALSFRAMDRLMIYLQKQLEG
>LR134205.1|VEB81361.1|166873_167212_+|Uncharacterized-protein-conserved-in-bacteria
MAESFITTNRFFDNKHYPRGFSRHGDFTIKEAQILERHGQAFNELDLGKREPATEAEKLFVAMCRGEREAATVEEKIWKKYTSRISRPKRFHTLSGGKPQLDPSDDYTDSDD
>LR134205.1|VEB81358.1|165933_166758_-|transcriptional-regulator-HdfR
MDTELLKTFLEVSKTRHFGRAAESLYLTQSAVSFRIRQLETQLGTNLFTRHRNNIRLTLAGERLIPYAESLMNTWLQAKKEISHASQHSELSIGATASLWDAYLTSWLQEAYLERNELRIESRVSTRQSLVKQLHARELDLLFTTEAPKMDELESKVIGNITFQLMKRASHLNQQSAQFIKIEWSADLSPLSQNSSAPKTEPILTTNSAMIAYQLMKTTNAVAFLPTHWLDLYPDLSPAAVEIIQKPLFAVWLNTSDQQVLIQQLLSQPVSNHQ
>LR134205.1|VEB81391.1|178608_178878_-|plasmid-stability-protein
MRKVSYSGQFKKDLKLAEKRGKDINKLKEIILLLVQGKRLPAQLKDHPLTGNWKPRRDLHIEPDWLLIYKIDNDTVHFDRTGSHSDLFK
>LR134205.1|VEB81394.1|178878_179127_-|plasmid-like-protein
MSIKSELIATKVDIELKEAFVAIARNKHRPASQILRDLIRVYVESNQTQPNEKTLNTFAKTDKGDDVFYAEDAHDLFKKLDI
>LR134205.1|VEB81397.1|179299_181321_+|ATP-dependent-DNA-helicase-Rep
MRLNPGQQKAVEYVSGPCLVLAGAGSGKTRVITNKIAYLIRQCRYSAKQIAAVTFTNKAAREMKERVAQTLGKQEAKGLMISTFHTLGLEIIKREYKALGIKSNFSLFDDQDQSALLKELTVDLLEEDKDLLSQLKSQISNWKNDMLTPEQVIGRAQSQQDHTFAECFRRYEQHLLSCNVLDFDDLISKPTLLLRTNEEVRARWQQRIRYLLVDEYQDTNTSQYELVKWLVGERARFTVVGDDDQSIYSWRGARPQNLVLLQKDFPQLNVIKLEQNYRSSGRILKSANILIENNPHVFEKRLFSELGYGDELRVLTANNEEHEAERVAGELIAHHFINKTNYKDYAILYRGNHQSRIFEKYLMQNRIPYRISGETSFFSREEIKDILAYLRVITNPDDDAAFLRIVNKPRREIGPMTIQKLGEWAKVRDKSLFNACFDLGLSQTLTGRGLSALQAFSQWMARIVQQSEREPLLAVRDLLHEMDYESWLYETSSSAKAAEMRMKNINQLFSWMSEMLEGDELHEPMTLSQVVNRFTLRDMMERGETDEELDQVQLMTLHASKGLEFPHVFLVGMEEGILPHQSSIDEDNVEEERRLAYVGITRAQKTLTFTLCKERRQYGELIRPEPSRFLYELPQDDLHWDTNKKKVLSAQEKQEKGQKGVAGLKAMLARHKP
>LR134205.1|VEB81400.1|181395_182904_-|guanosine-pentaphosphate-phosphohydrolase
MLKSSSLYAAIDLGSNSFHMLVVREIAGSIQVLSRVKRKVRLAAGLNKENELSEQAMERGWQCLRLFSEYLRDIPAEQIRVVATATLRIAKNADIFVAKASEILGNTVHVISGEEEARLIYRGVAHTTGGAEQRLVVDIGGGSTELVTGTGAKTTQLMSLSMGCVTWLERYFSDRSLTEENFAQAQQAAKAILAPVAEKLIQQGWQVCVGASGTVQALQEIMIAQGMDELITLPKLERLKQKAIECGKLEELEIEGLTFERALVFPSGLAILIAIFETLHIENMILAGGALREGLVYGMLHLPIEQDIRQRTLRNIQRRFQIDIEQAHRVQQLAEHFFIQVSKSWQLDNRCRELLSSACALHEIGLSVDFRQAPSHASYLVSHLDLPGYTPAQRRLIASFLRNQKGIIDLAPLNQQNALPINQAYRLVRLLRLAIIFASRRRDDTLPALRLRTEDEKLIITLPHQWIAEHPLRAENLHEEIQLQSYVHWPLMLEEQNNSRIG
>LR134205.1|VEB81403.1|182907_184206_-|ATP-dependent-RNA-helicase-RhlB
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKTLAFLTSTFHYLLTHPAKEGHEKNQPRALIMAPTRELAVQIYTDAQPLAQSTGVKMGLAYGGDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLNAIQVVVLDEADRMYDLGFIKDIRWLFRRMPNAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSNEEKMRLLQTLIEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILEDFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGKSGNSISLACEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRRHRPRQGQPRRNNSAPRRGNNTQRNNRNKRPSHS
>LR134205.1|VEB81406.1|184325_184652_+|thioredoxin
MSDKILHLSDNTFDVDVLQATGPVLVDFWAEWCGPCKMIAPILDEVATEYAGKLTVAKLNIDENPATAPKYGIRGIPTLILFKNGAVAATKVGALSKTQLKEFLDENI
>LR134205.1|VEB81409.1|185213_186473_+|transcription-termination-factor-Rho
MNLTELKNTPVSELIALGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVNFDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPPKAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNEEFFDFMKRS
>LR134205.1|VEB81412.1|186882_187959_+|undecaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MSTNVFYVFLFSFAFLFVARKVAKKIGLVDKPNYRKRHHGLIPLVGGISVYFGIVFAFYVSDIYIPHKELYLICAGILVFIGALDDRYDISVKIRATIQALVGIAMMVFGGLKLESLGHAFGPWDMHLGPFGYIVTLFAVWAAINAFNMVDGIDGLLGGLSCVSFGALGILLYQSGSSALAFWCFSFIAAILPYIMLNLGVCGKKFKVFMGDAGSTLIGFTIIWLLISSTQVDPHPINAVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTPRQAFVLITLAAAVLAAIGIIGENLSFVPEWVMLALFLLAFVMYGYCIKRAWRVARFIKRYKRRLRKATQLKH
>LR134205.1|VEB81415.1|187982_189041_+|lipopolysaccharide-biosynthesis-protein-WzzE
MNSENNVSRQGFSPDNELDIRGLCCALWSGKRWIIGFALLFALIALGASYLMQPKWSAIAMTERPTVNNLGSYYSQSQFLRNLDTQINPSVTVSQLSIPDEAYQEFVTQISAFDTRREFWLQTDYYKQRKENDAQADAALLDELINNIQFTPADEKKLVNDQLKLIAETANDSSQLLNEYIAFANKRAAEHLNEEVIAAWATRTQSMKALVKRQEMAAQAAYQRQINLLKQSIKVAEKQGISQKQTSIAIDELPDSKLFLLGVPLLQSQLETLMATGPDFDSDYDQNTAMLSTLAVGAKLQDNFQTYRFLRTPEDPVKRDSPRRAFMMVLWGAIGVLVGAGVALVRRSSLKK
>LR134205.1|VEB81418.1|189171_190302_+|UDP-N-acetylglucosamine-2-epimerase
MKVLTVFGTRPEAIKMAPLVHALANDDSFEAKVCVTAQHREMLDQVLNLFEIKPDYDLNIMKPGQDLTDITCRILEGLKPVLASFQPDVVLVHGDTTTTMAASLAAFYQQIPVGHVEAGLRTGNLYSPWPEEANRTIAGHLAMYHFAPTETAKLNLVREAVADKNIFVTGNTVIDALFWVSERVMGNQTLLDELAVQYPFIQPERKMILVTGHRRESFGGGFERICQALAEIALAHPDVEVVYPVHLNPNVSEPVKRILHGINNIKLIQPQDYLPFVYLMNHAYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGSVRLVGTDTKRIVSEVTSLLTDENAYHQMSKATNPYGDGHACQRILEALKNNQVTL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN693574	Marine virus AFVG_25M141, complete genome	21916-21947	7	0.781
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MH617354	Microviridae sp. isolate ctda10, complete genome	5379-5410	7	0.781
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	NC_028982	Bacillus phage JL, complete genome	16786-16817	8	0.75
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN694382	Marine virus AFVG_250M235, complete genome	43228-43259	9	0.719
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN693784	Marine virus AFVG_250M892, complete genome	42347-42378	9	0.719
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN693030	Marine virus AFVG_117M28, complete genome	17299-17330	9	0.719
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN694724	Marine virus AFVG_250M441, complete genome	45784-45815	10	0.688
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN694619	Marine virus AFVG_250M660, complete genome	17747-17778	10	0.688
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN693654	Marine virus AFVG_250M1181, complete genome	17091-17122	10	0.688
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN693958	Marine virus AFVG_250M1164, complete genome	18256-18287	10	0.688
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN693646	Marine virus AFVG_250M659, complete genome	17738-17769	10	0.688
LR134205_3	3.1\|2886473\|32\|LR134205\|CRISPRCasFinder	2886473-2886504	32	MN694157	Marine virus AFVG_250M658, complete genome	17743-17774	10	0.688

1. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN693574 (Marine virus AFVG_25M141, complete genome) position: , mismatch: 7, identity: 0.781

---atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
taaataaa---catatagatgttaatatagaaggt	Protospacer
   **.**    ****** ******** *******

2. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MH617354 (Microviridae sp. isolate ctda10, complete genome) position: , mismatch: 7, identity: 0.781

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
atgaagttaataaagctgttaatcttgaaaat	Protospacer
****** ***** **********   ***..*

3. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to NC_028982 (Bacillus phage JL, complete genome) position: , mismatch: 8, identity: 0.75

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaggatagctgttaatagctatact	Protospacer
 ********. **************  * . *

4. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN694382 (Marine virus AFVG_250M235, complete genome) position: , mismatch: 9, identity: 0.719

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatctgttaataatgctaca	Protospacer
 ************* *********. *  .

5. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN693784 (Marine virus AFVG_250M892, complete genome) position: , mismatch: 9, identity: 0.719

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctact	Protospacer
 ************* * *******. *  . *

6. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN693030 (Marine virus AFVG_117M28, complete genome) position: , mismatch: 9, identity: 0.719

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctact	Protospacer
 ************* * *******. *  . *

7. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN694724 (Marine virus AFVG_250M441, complete genome) position: , mismatch: 10, identity: 0.688

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctacc	Protospacer
 ************* * *******. *  . .

8. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN694619 (Marine virus AFVG_250M660, complete genome) position: , mismatch: 10, identity: 0.688

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctaca	Protospacer
 ************* * *******. *  .

9. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN693654 (Marine virus AFVG_250M1181, complete genome) position: , mismatch: 10, identity: 0.688

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctacc	Protospacer
 ************* * *******. *  . .

10. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN693958 (Marine virus AFVG_250M1164, complete genome) position: , mismatch: 10, identity: 0.688

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctacc	Protospacer
 ************* * *******. *  . .

11. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN693646 (Marine virus AFVG_250M659, complete genome) position: , mismatch: 10, identity: 0.688

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctaca	Protospacer
 ************* * *******. *  .

12. spacer 3.1|2886473|32|LR134205|CRISPRCasFinder matches to MN694157 (Marine virus AFVG_250M658, complete genome) position: , mismatch: 10, identity: 0.688

atgaaggtaatatagctgttaatagagaaggt	CRISPR spacer
ttgaaggtaatatatcagttaataatgctaca	Protospacer
 ************* * *******. *  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

299942 : 356726

Enterobacteria_phage(16.67%)

transposase,integrase,tRNA,protease

attL 336156:336179|attR 355027:355050

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB81736.1\|299942_300899_+\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
VEB81739.1\|301560_303690_+	polynucleotide phosphorylase/polyadenylase	NA	NA	NA	NA
VEB81742.1\|303804_304692_+	lipoprotein NlpI	NA	NA	NA	NA
VEB81745.1\|304863_306699_+	ATP-dependent RNA helicase DeaD	A0A1V0SBR7	Catovirus	7.2e-55	34.1
VEB81748.1\|306881_307532_-	DNA-binding protein	NA	NA	NA	NA
VEB81751.1\|307718_308681_+	sugare isomerase	NA	NA	NA	NA
VEB81754.1\|308717_309095_+	endoribonuclease	NA	NA	NA	NA
VEB81757.1\|309106_310354_+	MFS family transporter	NA	NA	NA	NA
VEB81760.1\|310812_311058_+	Uncharacterised protein	NA	NA	NA	NA
VEB81763.1\|311238_311613_-	Uncharacterised protein	NA	NA	NA	NA
VEB81766.1\|311635_312352_-	putative two-component response-regulatory protein YehT	NA	NA	NA	NA
VEB81769.1\|312354_314058_-	two-component system sensor kinase	Q9EYF3	Enterobacteria_phage	5.4e-214	69.7
VEB81772.1\|314293_315265_+	HlyD-family secretion protein	NA	NA	NA	NA
VEB81775.1\|315274_316420_+	putative transporter	NA	NA	NA	NA
VEB81777.1\|316416_317583_+	putative transporter	NA	NA	NA	NA
VEB81780.1\|318163_318730_+	fimbrial subunit	NA	NA	NA	NA
VEB81783.1\|318830_319529_+	fimbrial chaperone	NA	NA	NA	NA
VEB81786.1\|319566_322188_+	fimbrial outer membrane usher protein	NA	NA	NA	NA
VEB81789.1\|322191_322734_+	fimbrial subunit	NA	NA	NA	NA
VEB81792.1\|322749_323262_+	fimbrial subunit	NA	NA	NA	NA
VEB81795.1\|323294_324227_+	fimbrial adhesin	NA	NA	NA	NA
VEB81798.1\|324296_325175_-\|protease	protease	NA	NA	NA	NA
VEB81800.1\|325189_326185_-\|protease	protease	NA	NA	NA	NA
VEB81803.1\|326400_326934_+	lipid carrier protein	NA	NA	NA	NA
VEB81805.1\|326927_327431_+	acetyltransferase	NA	NA	NA	NA
VEB81808.1\|327447_327729_-	GIY-YIG nuclease superfamily protein	Q06VJ4	Trichoplusia_ni_ascovirus	6.1e-14	47.8
VEB81811.1\|328015_328267_+	Protein of uncharacterised function (DUF1471)	NA	NA	NA	NA
VEB81814.1\|328382_328823_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB81817.1\|328831_329209_-	lipoprotein	NA	NA	NA	NA
VEB81820.1\|329375_329585_-	Uncharacterised protein	NA	NA	NA	NA
VEB81823.1\|329611_330076_-	anaerobic ribonucleotide reductase-activating protein	A0A2H5BH04	Vibrio_virus	5.0e-53	60.4
VEB81826.1\|330080_332219_-	anaerobic ribonucleoside triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.6e-263	63.8
VEB81829.1\|332563_332950_-	endoribonuclease	NA	NA	NA	NA
VEB81832.1\|333287_333746_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
VEB81835.1\|333759_334695_-	aspartate carbamoyltransferase catalytic subunit	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.5
VEB81839.1\|334687_334867_-	Uncharacterised protein	NA	NA	NA	NA
VEB81843.1\|335046_336051_-	ornithine carbamoyltransferase subunit I	NA	NA	NA	NA
336156:336179	attL	NA	NA	NA	NA
VEB81846.1\|336357_337164_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	5.3e-119	79.8
VEB81849.1\|337281_337713_+	Regulator of ribonuclease activity B	NA	NA	NA	NA
VEB81852.1\|337806_338676_-	pirin-like protein	NA	NA	NA	NA
VEB81855.1\|338984_339152_-	lipoprotein	NA	NA	NA	NA
VEB81858.1\|339566_340076_-	acetyltransferase	NA	NA	NA	NA
VEB81861.1\|340476_343365_-\|tRNA	valyl-tRNA synthetase	A0A1V0SK04	Klosneuvirus	7.4e-147	38.1
VEB81864.1\|343378_343828_-	DNA polymerase III subunit chi	NA	NA	NA	NA
VEB81867.1\|343908_345417_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	8.3e-49	38.0
VEB81870.1\|345703_346801_+	permease	NA	NA	NA	NA
VEB81873.1\|346800_347880_+	permease	NA	NA	NA	NA
VEB81876.1\|347968_349243_-	beta-lactam binding protein AmpH	NA	NA	NA	NA
VEB81879.1\|349271_349361_-	Uncharacterised protein	NA	NA	NA	NA
VEB81882.1\|350929_351475_+\|integrase	prophage integrase	Q7M297	Enterobacteria_phage	1.6e-26	45.6
VEB81885.1\|351465_351663_+	plasmid-related antirestriction protein	NA	NA	NA	NA
VEB81888.1\|351786_351963_+	plasmid-like protein	NA	NA	NA	NA
VEB81891.1\|352340_353396_+	Uncharacterised protein	NA	NA	NA	NA
VEB81894.1\|353476_353728_-	Uncharacterised protein	NA	NA	NA	NA
VEB81897.1\|354365_354482_+	Uncharacterised protein	NA	NA	NA	NA
VEB81900.1\|354756_354990_-	Uncharacterised protein	NA	NA	NA	NA
VEB81903.1\|355087_355504_-\|transposase	IS element transposase	A0A1S5RHE3	Helicobacter_phage	2.6e-45	62.8
355027:355050	attR	NA	NA	NA	NA
VEB81906.1\|355526_356726_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	3.5e-183	80.2

DBSCAN-SWA_2

1507197 : 1585532

Morganella_phage(14.29%)

lysis,protease,capsid,integrase,portal,head,terminase,tail,transposase,tRNA

attL 1501305:1501321|attR 1551061:1551077

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1501305:1501321	attL	NA	NA	NA	NA
VEB84865.1\|1507197_1508301_-\|tRNA	tRNA-specific 2-thiouridylase MnmA	NA	NA	NA	NA
VEB84870.1\|1508406_1508859_-	Nudix hydrolase	NA	NA	NA	NA
VEB84873.1\|1508851_1509481_-	ribosomal large subunit pseudouridine synthase E	NA	NA	NA	NA
VEB84876.1\|1509619_1510873_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
VEB84879.1\|1510993_1512121_-\|integrase	phage integrase	O21925	Phage_21	3.7e-126	60.6
VEB84883.1\|1512101_1512344_-	excisionase	NA	NA	NA	NA
VEB84886.1\|1512408_1512939_-	Uncharacterised protein	A0A1W6JP41	Morganella_phage	2.0e-53	58.6
VEB84889.1\|1512995_1513823_-	prophage protein	A0A2R2Z323	Escherichia_phage	8.5e-80	56.9
VEB84892.1\|1513888_1514263_-	prophage protein	Q8HAA1	Salmonella_phage	3.2e-42	71.4
VEB84896.1\|1514592_1514709_+	Uncharacterised protein	NA	NA	NA	NA
VEB84904.1\|1514721_1515189_+	Uncharacterised protein	NA	NA	NA	NA
VEB84907.1\|1515208_1515412_-	Uncharacterised protein	NA	NA	NA	NA
VEB84910.1\|1515651_1516113_-	Uncharacterised protein	NA	NA	NA	NA
VEB84913.1\|1516123_1516432_-	Uncharacterised protein	A0A2H4J4X6	uncultured_Caudovirales_phage	2.3e-14	48.4
VEB84916.1\|1516434_1517550_-	Uncharacterised protein	NA	NA	NA	NA
VEB84919.1\|1517612_1518287_-	transcriptional regulator	A0A1W6JNY2	Morganella_phage	1.4e-88	75.6
VEB84922.1\|1518382_1518610_+	Helix-turn-helix	A0A1C9IHV8	Salmonella_phage	1.8e-11	50.0
VEB84925.1\|1518648_1519107_+	phage protein	K7PJS5	Enterobacterial_phage	3.9e-26	50.8
VEB84928.1\|1519196_1519406_+	Uncharacterised protein	NA	NA	NA	NA
VEB84931.1\|1519395_1519566_+	phage protein	NA	NA	NA	NA
VEB84934.1\|1519578_1520670_+	phage replication protein	K4NZ18	Pseudomonas_phage	1.1e-29	48.2
VEB84937.1\|1520841_1521549_+	phage antirepressor	G0ZND1	Cronobacter_phage	5.6e-56	51.7
VEB84940.1\|1521548_1522574_+	phage protein	A0A1W6JP62	Morganella_phage	2.8e-88	47.6
VEB84943.1\|1522601_1523000_+	phage antitermination Protein	Q8W638	Enterobacteria_phage	1.0e-30	55.0
VEB84946.1\|1523956_1524478_+	phage membrane protein	NA	NA	NA	NA
VEB84950.1\|1524801_1525137_-	carboxymuconolactone decarboxylase	NA	NA	NA	NA
VEB84953.1\|1525240_1526167_+	transcriptional regulator	NA	NA	NA	NA
VEB84956.1\|1526584_1527013_+	phage protein	NA	NA	NA	NA
VEB84959.1\|1527165_1527417_+	Uncharacterised protein	NA	NA	NA	NA
VEB84962.1\|1527860_1528130_+	phage protein	A0A2H4FNF0	Salmonella_phage	4.6e-19	53.5
VEB84965.1\|1528129_1528600_+	phage lysozyme	A0A1W6JNW4	Morganella_phage	5.8e-49	60.5
VEB84967.1\|1528581_1528740_+	Uncharacterised protein	NA	NA	NA	NA
VEB84970.1\|1528742_1529204_+\|lysis	phage endopeptidase (lysis protein)	A0A1P8DTG0	Proteus_phage	3.7e-24	47.6
VEB84973.1\|1530100_1530439_+	phage protein	F1C587	Cronobacter_phage	1.6e-40	67.9
VEB84976.1\|1530777_1531245_+\|terminase	phage terminase small subunit	Q9B019	Phage_GMSE-1	5.5e-44	59.7
VEB84979.1\|1531198_1532932_+\|terminase	phage terminase, large subunit	A0A0U2C138	Paracoccus_phage	6.9e-148	46.5
VEB84982.1\|1532931_1534200_+\|portal	phage portal protein	Q77W97	Enterobacteria_phage	5.1e-201	80.2
VEB84985.1\|1534217_1534886_+\|head,protease	head maturation protease	K7PM91	Enterobacterial_phage	1.1e-82	65.3
VEB84992.1\|1534889_1536056_+\|capsid	major capsid protein	F1C582	Cronobacter_phage	5.6e-170	79.8
VEB85001.1\|1536094_1536394_+	phage protein	K7PKV5	Enterobacterial_phage	2.8e-33	64.3
VEB85010.1\|1536393_1536723_+	phage protein	NA	NA	NA	NA
VEB85016.1\|1536712_1537186_+	phage protein	A0A0R6PHU8	Moraxella_phage	1.9e-12	31.5
VEB85021.1\|1537191_1537533_+	phage protein	NA	NA	NA	NA
VEB85025.1\|1537542_1538208_+	phage protein	NA	NA	NA	NA
VEB85028.1\|1538272_1538689_+	phage protein	NA	NA	NA	NA
VEB85031.1\|1538733_1538964_+	phage protein	NA	NA	NA	NA
VEB85034.1\|1538988_1539180_-	phage membrane protein	NA	NA	NA	NA
VEB85037.1\|1539306_1542582_+\|tail	tail length tape measure protein	B7SE05	Pseudomonas_virus	6.4e-54	45.6
VEB85040.1\|1542582_1543179_+	phage protein	S4TSP7	Salmonella_phage	4.6e-51	52.8
VEB85043.1\|1543178_1543760_+	phage protein	Q7Y3Z7	Yersinia_phage	2.4e-52	50.0
VEB85046.1\|1543771_1544077_+	Uncharacterised protein	NA	NA	NA	NA
VEB85049.1\|1544108_1544507_+	phage protein	A0A059VK01	Pseudomonas_phage	9.2e-32	47.7
VEB85052.1\|1544506_1548232_+\|tail	phage tail protein	Q7Y3Z3	Yersinia_phage	3.4e-200	51.8
VEB85055.1\|1548194_1548554_+	Uncharacterised protein	NA	NA	NA	NA
VEB85058.1\|1548553_1549240_+	Uncharacterised protein	NA	NA	NA	NA
VEB85061.1\|1549236_1549503_+	Uncharacterised protein	NA	NA	NA	NA
VEB85064.1\|1549519_1549780_+	Uncharacterised protein	A0A1P8DTJ0	Proteus_phage	1.9e-17	57.4
VEB85067.1\|1550214_1550391_+	phage protein	NA	NA	NA	NA
VEB85070.1\|1550483_1550789_-	fimbrial operon regulator	NA	NA	NA	NA
VEB85074.1\|1551877_1553158_+	TPR repeat-containing protein NMB0313 precursor	NA	NA	NA	NA
1551061:1551077	attR	NA	NA	NA	NA
VEB85077.1\|1553178_1554222_+	Uncharacterised protein	NA	NA	NA	NA
VEB85080.1\|1554663_1554828_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-22	92.6
VEB85082.1\|1554959_1555403_+	Uncharacterised protein	NA	NA	NA	NA
VEB85085.1\|1555930_1558195_-	Uncharacterised protein	A0A1L2BY82	Clostridium_phage	2.6e-62	32.5
VEB85088.1\|1558734_1559535_+	Protein of uncharacterised function (DUF2743)	NA	NA	NA	NA
VEB85090.1\|1559989_1560163_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.7e-22	92.6
VEB85093.1\|1560331_1560490_-\|transposase	transposase	NA	NA	NA	NA
VEB85096.1\|1560808_1562014_+	Uncharacterised protein	NA	NA	NA	NA
VEB85099.1\|1563299_1564424_+	lipase	NA	NA	NA	NA
VEB85104.1\|1565408_1565867_+	heat shock protein	NA	NA	NA	NA
VEB85107.1\|1566357_1566819_+	Uncharacterised protein	NA	NA	NA	NA
VEB85110.1\|1566942_1567317_-	Uncharacterized HTH-type transcriptional regulator ytcD	NA	NA	NA	NA
VEB85113.1\|1567406_1568255_+	Quinone oxidoreductase 2	NA	NA	NA	NA
VEB85116.1\|1568495_1568693_+	lipoprotein	NA	NA	NA	NA
VEB85119.1\|1568716_1569259_-	uridine kinase	NA	NA	NA	NA
VEB85122.1\|1570099_1570339_-	transcriptional regulator	NA	NA	NA	NA
VEB85125.1\|1571057_1571231_-	immunoglobulin-binding regulator	A0A0F7L444	uncultured_marine_virus	1.2e-12	64.8
VEB85128.1\|1571253_1571700_-	immunoglobulin-binding regulator	A0A218KCN1	Bacillus_phage	4.7e-08	29.3
VEB85131.1\|1571712_1572939_-	immunoglobulin-binding regulator	A0A220GKF8	Streptococcus_phage	2.0e-61	33.2
VEB85134.1\|1573496_1574159_+	Methyltransferase domain	NA	NA	NA	NA
VEB85137.1\|1574721_1575078_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB85140.1\|1575280_1575451_+	Uncharacterised protein	NA	NA	NA	NA
VEB85143.1\|1575735_1576731_+	Uncharacterized conserved protein	NA	NA	NA	NA
VEB85145.1\|1576947_1577124_+	Uncharacterised protein	A0A1W6JNZ9	Morganella_phage	9.1e-08	60.0
VEB85148.1\|1577615_1577858_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEB85151.1\|1578261_1578543_+	Uncharacterised protein	NA	NA	NA	NA
VEB85154.1\|1578911_1579325_+	lipoprotein	NA	NA	NA	NA
VEB85157.1\|1579352_1579595_+	lipoprotein	NA	NA	NA	NA
VEB85160.1\|1579657_1580218_-	ATP-binding protein	A0A219VHB7	Ochrobactrum_phage	1.9e-19	50.6
VEB85163.1\|1580593_1580791_+	Protein of uncharacterised function (DUF3423)	NA	NA	NA	NA
VEB85166.1\|1580808_1581585_+	methionine aminopeptidase	NA	NA	NA	NA
VEB85169.1\|1581819_1582203_+	phage antitermination protein	A0A1W6JNX1	Morganella_phage	2.3e-24	47.8
VEB85172.1\|1582345_1583209_+	lipase	NA	NA	NA	NA
VEB85175.1\|1583334_1583766_-	Antitoxin HicB	Q7Y3V7	Yersinia_phage	1.8e-20	38.1
VEB85178.1\|1583884_1584301_-\|transposase	IS element transposase	A0A1S5RHE3	Helicobacter_phage	3.4e-45	62.8
VEB85181.1\|1584323_1585532_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	2.0e-186	80.8

DBSCAN-SWA_3

1805609 : 1815601

Escherichia_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB85792.1\|1805609_1807667_-	copper exporting ATPase	E4ZFI9	Streptococcus_phage	4.8e-31	26.1
VEB85795.1\|1807678_1809379_-	potassium-transporting ATPase subunit A	NA	NA	NA	NA
VEB85798.1\|1809714_1810401_+	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	NA	NA	NA	NA
VEB85801.1\|1810400_1810862_+\|tRNA	tRNA-specific adenosine deaminase	S4VYZ2	Pandoravirus	7.0e-15	34.6
VEB85804.1\|1810914_1811526_-	chaperone	A0A077SLS7	Escherichia_phage	7.3e-28	39.1
VEB85807.1\|1811665_1812526_-	anaerobic dimethyl sulfoxide reductase chain C	A0A077SK59	Escherichia_phage	5.3e-24	35.2
VEB85809.1\|1812527_1813145_-	anaerobic dimethyl sulfoxide reductase chain B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
VEB85812.1\|1813156_1815601_-	dimethyl sulfoxide reductase chain A	A0A077SK27	Escherichia_phage	7.3e-220	50.4

DBSCAN-SWA_4

2349512 : 2368469

Burkholderia_phage(26.67%)

holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB87336.1\|2349512_2351945_+	dimethyl sulfoxide reductase chain A	A0A077SK27	Escherichia_phage	5.0e-261	54.5
VEB87338.1\|2351956_2352574_+	anaerobic dimethyl sulfoxide reductase chain B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
VEB87340.1\|2352577_2353354_+	anaerobic dimethyl sulfoxide reductase chain C	A0A077SK59	Escherichia_phage	5.1e-42	39.8
VEB87342.1\|2353469_2354012_-	Uncharacterized protein conserved in bacteria	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
VEB87345.1\|2354951_2356229_-	phage protein	Q6IWQ6	Burkholderia_phage	2.5e-14	34.1
VEB87348.1\|2356234_2356891_-	phage protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
VEB87351.1\|2356887_2358075_-	phage protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
VEB87354.1\|2358067_2358412_-	phage protein	NA	NA	NA	NA
VEB87357.1\|2358408_2359101_-	phage protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
VEB87360.1\|2359103_2359916_-	phage protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
VEB87363.1\|2359884_2360205_-	phage protein	NA	NA	NA	NA
VEB87366.1\|2360217_2360706_-	phage protein	NA	NA	NA	NA
VEB87369.1\|2360708_2363012_-	phage protein	A0A2H5BG44	Pseudoalteromonas_phage	1.6e-14	23.3
VEB87372.1\|2363094_2363553_-	phage protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
VEB87375.1\|2363612_2364065_-	phage protein	NA	NA	NA	NA
VEB87378.1\|2364075_2365563_-	phage protein	A0A088C3U1	Shewanella_sp._phage	3.2e-77	35.5
VEB87381.1\|2365571_2366084_-	phage protein	NA	NA	NA	NA
VEB87385.1\|2366120_2366570_-	phage protein	NA	NA	NA	NA
VEB87388.1\|2366566_2366971_-	phage protein	A0A0E3JJ20	Enterobacteria_phage	3.8e-25	45.8
VEB87391.1\|2366973_2367273_-\|holin,lysis	phage holin (lysis protein)	A0A1P8DTE4	Proteus_phage	3.2e-21	50.0
VEB87392.1\|2367653_2368469_-	phage antitermination protein	M9NZB0	Enterobacteria_phage	3.5e-54	43.4

DBSCAN-SWA_5

3131736 : 3140597

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEB89323.1\|3131736_3133014_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.8e-11	33.7
VEB89326.1\|3133704_3134385_+	phosphotransferase/phosphoserine phosphatase	NA	NA	NA	NA
VEB89331.1\|3134481_3135057_-	tellurite resistance protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
VEB89336.1\|3135133_3135712_-	tellurite resistance protein	K4JRX3	Caulobacter_phage	2.4e-33	41.5
VEB89339.1\|3135779_3136805_-	tellurite resistance protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
VEB89342.1\|3136839_3137295_-	tellurite resistance protein	NA	NA	NA	NA
VEB89345.1\|3137319_3138474_-	tellurite resistance protein	NA	NA	NA	NA
VEB89348.1\|3138474_3139059_-	tellurite resistance protein	K4JRX3	Caulobacter_phage	4.2e-17	30.2
VEB89351.1\|3139451_3140597_+	Protein of uncharacterised function (DUF3706)	A0A172Q0Y1	Acinetobacter_phage	4.5e-31	26.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage