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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134214 Escherichia coli strain NCTC11104 genome assembly, chromosome: 1 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 10 0

Results visualization

1. LR134214
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134214_1 634178-634300 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 626534 : 698505 83 Erwinia_phage(25.53%) tail,plate,capsid,terminase,tRNA NA
DBSCAN-SWA_2 1075611 : 1099163 20 Stx2-converting_phage(37.5%) integrase,transposase attL 1090737:1090749|attR 1100898:1100910
DBSCAN-SWA_3 1396650 : 1405408 11 Enterobacteria_phage(28.57%) transposase NA
DBSCAN-SWA_4 1620345 : 1628972 9 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_5 1667366 : 1676935 8 Bacillus_phage(28.57%) protease NA
DBSCAN-SWA_6 1796384 : 1837230 49 Escherichia_phage(17.65%) protease,tail,plate,head,integrase,terminase attL 1789617:1789634|attR 1801949:1801966
DBSCAN-SWA_7 1946082 : 2031357 94 Enterobacteria_phage(46.3%) protease,tail,head,integrase,portal,transposase,terminase attL 1951818:1951848|attR 1997848:1997878
DBSCAN-SWA_8 2958092 : 3034396 76 Klebsiella_phage(33.33%) protease,tail,head,portal,terminase,tRNA NA
DBSCAN-SWA_9 3076305 : 3087098 7 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_10 3647774 : 3684659 34 Escherichia_phage(25.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage