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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134226 Escherichia coli strain NCTC9088 genome assembly, chromosome: 1 6 crisprs csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4 0 19 9 0

Results visualization

1. LR134226
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134226_1 1003125-1004007 Unclear I-E
14 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134226_2 1029708-1030346 TypeI-E I-E
10 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134226_3 2126951-2127074 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134226_5 3105535-3105674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134226_6 3394191-3394287 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134226_7 3933624-3933756 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134226_7 7.1|3933641|42|LR134226|PILER-CR 3933641-3933682 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 0 1.0
LR134226_4 4.1|2808575|40|LR134226|CRISPRCasFinder 2808575-2808614 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
LR134226_7 7.2|3933700|40|LR134226|PILER-CR 3933700-3933739 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 1 0.975
LR134226_3 3.1|2126994|38|LR134226|CRISPRCasFinder 2126994-2127031 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
LR134226_2 2.8|1030164|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1030164-1030195 32 MK356558 Salmonella sp. strain Sa1423 plasmid pSa1423-160k, complete sequence 30604-30635 4 0.875
LR134226_2 2.8|1030164|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1030164-1030195 32 MK356557 Salmonella sp. strain Sa1423 plasmid pSa1423-90k, complete sequence 58819-58850 5 0.844
LR134226_1 1.3|1003276|32|LR134226|CRISPRCasFinder,CRT 1003276-1003307 32 NC_047816 Ralstonia phage RS-PI-1, complete genome 38291-38322 6 0.812
LR134226_1 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT 1003154-1003185 32 MN045229 Escherichia phage Mangalitsa, complete genome 16712-16743 7 0.781
LR134226_1 1.8|1003581|32|LR134226|CRISPRCasFinder,CRT 1003581-1003612 32 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1371679-1371710 7 0.781
LR134226_1 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT 1003703-1003734 32 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 101414-101445 7 0.781
LR134226_1 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT 1003947-1003978 32 KR080197 Mycobacterium phage FlagStaff, complete genome 15476-15507 7 0.781
LR134226_1 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT 1003154-1003185 32 MH823906 Citrobacter phage Maroon, complete genome 88358-88389 8 0.75
LR134226_1 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT 1003154-1003185 32 KT381880 Citrobacter phage Margaery, complete genome 87990-88021 8 0.75
LR134226_1 1.3|1003276|32|LR134226|CRISPRCasFinder,CRT 1003276-1003307 32 NZ_CP035502 Sphingosinicella sp. BN140058 plasmid p1, complete sequence 68506-68537 8 0.75
LR134226_1 1.4|1003337|32|LR134226|CRISPRCasFinder,CRT 1003337-1003368 32 NZ_CP031953 Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence 7471-7502 8 0.75
LR134226_1 1.4|1003337|32|LR134226|CRISPRCasFinder,CRT 1003337-1003368 32 NC_018421 Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence 7378-7409 8 0.75
LR134226_1 1.5|1003398|32|LR134226|CRISPRCasFinder,CRT 1003398-1003429 32 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 223007-223038 8 0.75
LR134226_1 1.5|1003398|32|LR134226|CRISPRCasFinder,CRT 1003398-1003429 32 MN693496 Marine virus AFVG_25M103, complete genome 27266-27297 8 0.75
LR134226_1 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT 1003703-1003734 32 NZ_CP010410 Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence 347166-347197 8 0.75
LR134226_1 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT 1003947-1003978 32 NZ_CP014600 Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence 15418-15449 8 0.75
LR134226_2 2.3|1029859|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029859-1029890 32 KT630646 Salmonella phage SEN5, complete genome 23162-23193 8 0.75
LR134226_2 2.3|1029859|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029859-1029890 32 KT630645 Salmonella phage SEN4, complete genome 23162-23193 8 0.75
LR134226_2 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029981-1030012 32 LN610585 Pseudomonas phage vB_PaeS_PAO1_Ab20, complete genome 18296-18327 8 0.75
LR134226_2 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029981-1030012 32 KU356689 Pseudomonas phage ZC01, complete genome 18147-18178 8 0.75
LR134226_2 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029981-1030012 32 NC_042115 Pseudomonas phage vB_PaeS_PAO1_Ab19, complete genome 18298-18329 8 0.75
LR134226_2 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029981-1030012 32 NC_026594 Pseudomonas phage vB_PaeS_PAO1_Ab18, complete genome 18307-18338 8 0.75
LR134226_1 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT 1003154-1003185 32 NC_022602 Carnobacterium inhibens subsp. gilichinskyi plasmid pWNCR47, complete sequence 4506-4537 9 0.719
LR134226_1 1.5|1003398|32|LR134226|CRISPRCasFinder,CRT 1003398-1003429 32 NC_018066 Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01, complete sequence 14970-15001 9 0.719
LR134226_1 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT 1003703-1003734 32 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 89227-89258 9 0.719
LR134226_1 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT 1003703-1003734 32 NZ_CP021083 Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence 361520-361551 9 0.719
LR134226_1 1.12|1003825|32|LR134226|CRISPRCasFinder,CRT 1003825-1003856 32 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224876-224907 9 0.719
LR134226_1 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT 1003947-1003978 32 NZ_CP009292 Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence 139210-139241 9 0.719
LR134226_2 2.7|1030103|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1030103-1030134 32 NZ_CP025805 Sulfitobacter sp. SK012 plasmid unnamed1, complete sequence 187229-187260 9 0.719
LR134226_2 2.10|1030286|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1030286-1030317 32 NZ_CP026601 Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence 97056-97087 9 0.719
LR134226_1 1.3|1003276|32|LR134226|CRISPRCasFinder,CRT 1003276-1003307 32 NZ_CP010421 Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence 64611-64642 10 0.688
LR134226_1 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT 1003703-1003734 32 NZ_CP019037 Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence 354311-354342 10 0.688
LR134226_1 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT 1003947-1003978 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688
LR134226_1 1.15|1003153|37|LR134226|PILER-CR 1003153-1003189 37 MN045229 Escherichia phage Mangalitsa, complete genome 16711-16747 10 0.73
LR134226_2 2.4|1029920|32|LR134226|PILER-CR,CRISPRCasFinder,CRT 1029920-1029951 32 NC_015708 Pseudoalteromonas sp. SANK 73390 plasmid pTML1 carrying thiomarinol biosynthesis cluster 33648-33679 11 0.656

1. spacer 7.1|3933641|42|LR134226|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

2. spacer 4.1|2808575|40|LR134226|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcattcttgaaattccccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
************************ ***************

3. spacer 7.2|3933700|40|LR134226|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagcaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *****************************

4. spacer 3.1|2126994|38|LR134226|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

5. spacer 2.8|1030164|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to MK356558 (Salmonella sp. strain Sa1423 plasmid pSa1423-160k, complete sequence) position: , mismatch: 4, identity: 0.875

--atgatccgcgtgcgaccctcgttatagtctgc	CRISPR spacer
ttatgat--gcgtgcgaccttcgttatagtcggc	Protospacer
  *****  **********.*********** **

6. spacer 2.8|1030164|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to MK356557 (Salmonella sp. strain Sa1423 plasmid pSa1423-90k, complete sequence) position: , mismatch: 5, identity: 0.844

-atgatccgcgtgcgaccctcgttatagtctgc	CRISPR spacer
tatg-tatgcgtgcgaccttcgttatagtcggc	Protospacer
 *** * .**********.*********** **

7. spacer 1.3|1003276|32|LR134226|CRISPRCasFinder,CRT matches to NC_047816 (Ralstonia phage RS-PI-1, complete genome) position: , mismatch: 6, identity: 0.812

ttggtta--cctcgctgttgctgtgctgctggcg	CRISPR spacer
--gggtactcctcgccgatgctgtgctgctggag	Protospacer
  ** **  ******.* ************** *

8. spacer 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT matches to MN045229 (Escherichia phage Mangalitsa, complete genome) position: , mismatch: 7, identity: 0.781

ttgccaaaagacttttctgactatattgaaag	CRISPR spacer
ctgccaaaagactttgctgacgatattcagta	Protospacer
.************** ***** ***** *. .

9. spacer 1.8|1003581|32|LR134226|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 7, identity: 0.781

tttttgtacgtcatgatgcgtctccatgtagc	CRISPR spacer
ttttcgtacgtcatgatgagtctcctggctgt	Protospacer
****.************* ******  *. *.

10. spacer 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 7, identity: 0.781

gcgagggg---cagccgttcgcgctgcatgttgat	CRISPR spacer
---agcgatttcagccgttcgagctgcatgtggat	Protospacer
   ** *.   ********** ********* ***

11. spacer 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gacgccggcgccgcgatgccgttcgccgggtt	Protospacer
******* ******** ******. * . ***

12. spacer 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT matches to MH823906 (Citrobacter phage Maroon, complete genome) position: , mismatch: 8, identity: 0.75

--ttgccaaaagacttttctgactatattgaaag	CRISPR spacer
ggttgtt--cagacttttctgactaaatttaaac	Protospacer
  ***..   *************** *** *** 

13. spacer 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT matches to KT381880 (Citrobacter phage Margaery, complete genome) position: , mismatch: 8, identity: 0.75

--ttgccaaaagacttttctgactatattgaaag	CRISPR spacer
ggttgtt--cagacttttctgactaaatttaaac	Protospacer
  ***..   *************** *** *** 

14. spacer 1.3|1003276|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP035502 (Sphingosinicella sp. BN140058 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ttggttacctcgctgttgctgtgctgctggcg	CRISPR spacer
tcgacgacctcgttcttgctgtgctgctgacc	Protospacer
*.*.. ******.* **************.* 

15. spacer 1.4|1003337|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP031953 (Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgctcctccagtttatccagcacgccgatcgc	CRISPR spacer
tgctggaccagattatccagcacgcccatctg	Protospacer
.***   **** ************** ***  

16. spacer 1.4|1003337|32|LR134226|CRISPRCasFinder,CRT matches to NC_018421 (Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence) position: , mismatch: 8, identity: 0.75

cgctcctccagtttatccagcacgccgatcgc	CRISPR spacer
tgctggaccagattatccagcacgcccatctg	Protospacer
.***   **** ************** ***  

17. spacer 1.5|1003398|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.75

gctgacgaattagataatccagataatgatga	CRISPR spacer
attgaaacgttagttaatccagataataatga	Protospacer
..*** . .**** *************.****

18. spacer 1.5|1003398|32|LR134226|CRISPRCasFinder,CRT matches to MN693496 (Marine virus AFVG_25M103, complete genome) position: , mismatch: 8, identity: 0.75

gctgacgaattagataatccagataatgatga	CRISPR spacer
ggagtaaatttagacaatccagataatgttga	Protospacer
*  *  .* *****.************* ***

19. spacer 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gcgaggggcagccgttcgcgctgca--tgttgat	CRISPR spacer
tggagtcgcagccgttcgcgctgcaggcgctg--	Protospacer
  ***  ******************  .*.**  

20. spacer 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gtcgccgccgccgcgcagccctttccacagcc	Protospacer
* ************* **** *****.  *..

21. spacer 2.3|1029859|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 8, identity: 0.75

ccacgatatttccgccgttcatgatgaaatgg	CRISPR spacer
caataatatttcccccgttcatcatgaaccag	Protospacer
* *..******** ******** ***** ..*

22. spacer 2.3|1029859|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 8, identity: 0.75

ccacgatatttccgccgttcatgatgaaatgg	CRISPR spacer
caataatatttcccccgttcatcatgaaccag	Protospacer
* *..******** ******** ***** ..*

23. spacer 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to LN610585 (Pseudomonas phage vB_PaeS_PAO1_Ab20, complete genome) position: , mismatch: 8, identity: 0.75

ccatcatatgaacccaggcacggcacgcgctc	CRISPR spacer
ccatcatctgaacccaggcgcgggtgcagccc	Protospacer
******* ***********.***     **.*

24. spacer 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to KU356689 (Pseudomonas phage ZC01, complete genome) position: , mismatch: 8, identity: 0.75

ccatcatatgaacccaggcacggcacgcgctc	CRISPR spacer
ccatcatctgaacccaggcgcgggtgcagccc	Protospacer
******* ***********.***     **.*

25. spacer 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to NC_042115 (Pseudomonas phage vB_PaeS_PAO1_Ab19, complete genome) position: , mismatch: 8, identity: 0.75

ccatcatatgaacccaggcacggcacgcgctc	CRISPR spacer
ccatcatctgaacccaggcgcgggtgcagccc	Protospacer
******* ***********.***     **.*

26. spacer 2.5|1029981|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to NC_026594 (Pseudomonas phage vB_PaeS_PAO1_Ab18, complete genome) position: , mismatch: 8, identity: 0.75

ccatcatatgaacccaggcacggcacgcgctc	CRISPR spacer
ccatcatctgaacccaggcgcgggtgcagccc	Protospacer
******* ***********.***     **.*

27. spacer 1.1|1003154|32|LR134226|CRISPRCasFinder,CRT matches to NC_022602 (Carnobacterium inhibens subsp. gilichinskyi plasmid pWNCR47, complete sequence) position: , mismatch: 9, identity: 0.719

ttgccaaaagacttttctgactatattgaaag	CRISPR spacer
tcttgggaggaatttcctgactatattgaaag	Protospacer
*. . ..*.** ***.****************

28. spacer 1.5|1003398|32|LR134226|CRISPRCasFinder,CRT matches to NC_018066 (Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01, complete sequence) position: , mismatch: 9, identity: 0.719

gctgacgaattagataatccagataatgatga	CRISPR spacer
tattttatattagataatccagatactaatga	Protospacer
  *  .. ***************** *.****

29. spacer 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggggcagccgttcgcgctgcatgttgat	CRISPR spacer
gcgaggcgctgccgttcgcgctggaactcctg	Protospacer
****** ** ************* *  *.   

30. spacer 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggggcagccgttcgcgctgcatgttgat	CRISPR spacer
tcgaggggcagccgctggcgctgctcgaaggc	Protospacer
 *************.* ******* .*  *..

31. spacer 1.12|1003825|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taaggccgtcgccggatcagcctggctatgcc	CRISPR spacer
cggggccgtcgccggatcagccggtctgctgc	Protospacer
...******************* * **..  *

32. spacer 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gaagccgccgccgcgaacccgtttttcccggg	Protospacer
** ************** ******..  .*  

33. spacer 2.7|1030103|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025805 (Sulfitobacter sp. SK012 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcatatttcatgcagcgttctgaatgagtaag	CRISPR spacer
ttttatttcatgcagcgttttgcatgacattg	Protospacer
 . ****************.** ****    *

34. spacer 2.10|1030286|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgaaaaaaagggactgggtaacagcgcgtga	CRISPR spacer
atgaaaaaaaggtactggataacattataaga	Protospacer
 *********** *****.***** .... **

35. spacer 1.3|1003276|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 10, identity: 0.688

ttggttacctcgctgttgctgtgctgctggcg	CRISPR spacer
gcctgcgcatctctggtgctgtgctgctggcg	Protospacer
 .   ..* ** *** ****************

36. spacer 1.10|1003703|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gcgaggggcagccgttcgcgctgcatgttgat	CRISPR spacer
tcccggggcagccgttcgcgatgaatgaaacc	Protospacer
 *  **************** ** ***  . .

37. spacer 1.14|1003947|32|LR134226|CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
ttgcccgccgcggcgaagccgcttccgtcctc	Protospacer
    ******* *********.***** . *.

38. spacer 1.15|1003153|37|LR134226|PILER-CR matches to MN045229 (Escherichia phage Mangalitsa, complete genome) position: , mismatch: 10, identity: 0.73

gttgccaaaagacttttctgactatattgaaaggtgt	CRISPR spacer
actgccaaaagactttgctgacgatattcagtatcgt	Protospacer
..************** ***** ***** *. . .**

39. spacer 2.4|1029920|32|LR134226|PILER-CR,CRISPRCasFinder,CRT matches to NC_015708 (Pseudoalteromonas sp. SANK 73390 plasmid pTML1 carrying thiomarinol biosynthesis cluster) position: , mismatch: 11, identity: 0.656

acttacgcaacaaatcccgcctaaacaaccac	CRISPR spacer
gtaatcgcaacaaatgccgcctaagcaattcg	Protospacer
..   ********** ********.***..  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1046702 : 1053842 6 Escherichia_phage(83.33%) tRNA NA
DBSCAN-SWA_2 1091619 : 1147211 55 Vibrio_phage(21.43%) transposase,tRNA,integrase attL 1140260:1140319|attR 1147217:1148474
DBSCAN-SWA_3 1649172 : 1658614 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_4 1750103 : 1758896 9 Enterobacteria_phage(42.86%) NA NA
DBSCAN-SWA_5 2200542 : 2263294 67 Enterobacteria_phage(46.51%) lysis,terminase,tail,integrase,portal,protease,head attL 2208119:2208134|attR 2238480:2238495
DBSCAN-SWA_6 2683550 : 2693554 11 Enterobacteria_phage(75.0%) NA NA
DBSCAN-SWA_7 2887119 : 2986163 94 Escherichia_phage(45.0%) lysis,terminase,holin,plate,capsid,protease,tRNA,integrase,tail attL 2896781:2896796|attR 2989478:2989493
DBSCAN-SWA_8 3336831 : 3391042 60 Enterobacteria_phage(37.5%) lysis,terminase,capsid,protease,tRNA,integrase,portal,tail,head,coat attL 3336363:3336409|attR 3380836:3380882
DBSCAN-SWA_9 4099685 : 4112957 13 Enterobacteria_phage(70.0%) integrase attL 4094091:4094105|attR 4124666:4124680
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage