CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134228	Escherichia coli strain NCTC9699 genome assembly, chromosome: 1	8 crisprs	csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,c2c9_V-U4,DinG,WYL,Cas14u_CAS-V	0	40	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134228_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_1

1085594-1086720

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

18 spacers

The CRISPR arrays of LR134228_1

>merge|LR134228|1|1085594-1086720|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTAGACGCGCTGTACAGGTTCGCCACCTACGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGATGCAACAGGTGCCAAAGCCCCCGACGGCACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCATGAGCCAGGACGACGCCCGGTCCGAGGGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGCTGGCGGGGACCGATCATATCTGTCAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATCATGATTCCGGACGACGTGCTGGCGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTAGACAGAGTAATAAATAACGCAGACAAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTAGCCTGGAGGCGCTCGCGCGCCTCTTCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTGTGATTCAGTAATCGTTTGAGTATGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATCCCAGCCTTGAAATTTTGGCTCATGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCTGACGCGGTAAAAAGCGGGGCGTGATTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGCCAGCGCCGCGCACGCCTGATCATATGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTTCTATTTCCTCGGGATTTGCCGACACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAAACCGGGCAATCGCAAAAAGGCGTAATGTGTTCCCCGCGCCAGCGGGGATAAATCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>LR134228|1|1|1085594-1085927|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGACGCGCTGTACAGGTTCGCCACCTACGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCAACAGGTGCCAAAGCCCCCGACGGCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGAGCCAGGACGACGCCCGGTCCGAGGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTGGCGGGGACCGATCATATCTGTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATCATGATTCCGGACGACGTGCTGGCGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCGTAGACAGAGTAATAAATAACGCAGACAAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTAGCCTGGAGGCGCTCGCGCGCCTCTTCAGGTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCTGACGCGGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAATC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC


>LR134228|1|1|1085594-1086720|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGACGCGCTGTACAGGTTCGCCACCTACGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCAACAGGTGCCAAAGCCCCCGACGGCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGAGCCAGGACGACGCCCGGTCCGAGGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTGGCGGGGACCGATCATATCTGTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATCATGATTCCGGACGACGTGCTGGCGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGACAGAGTAATAAATAACGCAGACAAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTAGCCTGGAGGCGCTCGCGCGCCTCTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTGACGCGGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAATCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>LR134228|1|1|1085594-1086720|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGACGCGCTGTACAGGTTCGCCACCTACGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCAACAGGTGCCAAAGCCCCCGACGGCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGAGCCAGGACGACGCCCGGTCCGAGGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTGGCGGGGACCGATCATATCTGTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATCATGATTCCGGACGACGTGCTGGCGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGACAGAGTAATAAATAACGCAGACAAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTAGCCTGGAGGCGCTCGCGCGCCTCTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTGACGCGGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAATCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>LR134228|1|2|1086021-1086719|PILER-CR
	TAGACGCGCTGTACAGGTTCGCCACCTACGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCAACAGGTGCCAAAGCCCCCGACGGCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGAGCCAGGACGACGCCCGGTCCGAGGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCTGGCGGGGACCGATCATATCTGTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATCATGATTCCGGACGACGTGCTGGCGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCGTAGACAGAGTAATAAATAACGCAGACAAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTAGCCTGGAGGCGCTCGCGCGCCTCTTCAGGTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCTGACGCGGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAATC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC66949.1\|1079315_1080107_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
LR134228.1\|VEC66959.1\|1084582_1085254_+\|7-carboxy-7-deazaguanine-synthase;-queosine-biosynthesis	unknown	unknown	gnl\|CDD\|275126
LR134228.1\|VEC66951.1\|1080334_1081972_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LR134228.1\|VEC66965.1\|1088863_1090141_-\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|349949
LR134228.1\|VEC66979.1\|1096553_1096814_-\|ferredoxin-like-protein-YgcO	unknown	unknown	gnl\|CDD\|225289
LR134228.1\|VEC66975.1\|1094953_1095814_+\|electron-transfer-flavoprotein-subunit-YgcQ	unknown	unknown	gnl\|CDD\|224936
LR134228.1\|VEC66971.1\|1092790_1094200_+\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|340929
LR134228.1\|VEC66977.1\|1095961_1096537_-\|glycerol-antiterminator-regulatory-protein	unknown	unknown	gnl\|CDD\|224865
LR134228.1\|VEC66981.1\|1096804_1098076_-\|putative-FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
LR134228.1\|VEC66943.1\|1076349_1078584_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LR134228.1\|VEC66947.1\|1078909_1079245_+\|toxin-ChpA	unknown	unknown	gnl\|CDD\|182138
LR134228.1\|VEC66953.1\|1082059_1083358_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LR134228.1\|VEC66957.1\|1084303_1084444_-\|small-protein-involved-in-the-cell-envelope-stress-response	unknown	unknown	unknown
LR134228.1\|VEC66955.1\|1083417_1084290_-\|protein	unknown	unknown	gnl\|CDD\|224429
LR134228.1\|VEC66967.1\|1090459_1091245_+\|putative-short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|187605
LR134228.1\|VEC66945.1\|1078661_1078910_+\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
LR134228.1\|VEC66973.1\|1094177_1094957_+\|electron-transfer-flavoprotein-subunit-YgcR	unknown	unknown	gnl\|CDD\|224997
LR134228.1\|VEC66963.1\|1087358_1088837_-\|putative-sugar-kinase	unknown	unknown	gnl\|CDD\|212662
LR134228.1\|VEC66941.1\|1075000_1076302_+\|23s-rRNA-(uracil-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|237291
LR134228.1\|VEC66969.1\|1091314_1092769_+\|putative-FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC66949.1\|1079315_1080107_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
LR134228.1\|VEC66959.1\|1084582_1085254_+\|7-carboxy-7-deazaguanine-synthase;-queosine-biosynthesis	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
LR134228.1\|VEC66951.1\|1080334_1081972_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LR134228.1\|VEC66965.1\|1088863_1090141_-\|major-facilitator-superfamily-protein	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
LR134228.1\|VEC66979.1\|1096553_1096814_-\|ferredoxin-like-protein-YgcO	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
LR134228.1\|VEC66975.1\|1094953_1095814_+\|electron-transfer-flavoprotein-subunit-YgcQ	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
LR134228.1\|VEC66977.1\|1095961_1096537_-\|glycerol-antiterminator-regulatory-protein	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
LR134228.1\|VEC66981.1\|1096804_1098076_-\|putative-FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
LR134228.1\|VEC66943.1\|1076349_1078584_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LR134228.1\|VEC66947.1\|1078909_1079245_+\|toxin-ChpA	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
LR134228.1\|VEC66953.1\|1082059_1083358_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LR134228.1\|VEC66971.1\|1092790_1094200_+\|major-facilitator-superfamily-protein	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.52591e-51
LR134228.1\|VEC66955.1\|1083417_1084290_-\|protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
LR134228.1\|VEC66967.1\|1090459_1091245_+\|putative-short-chain-dehydrogenase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.9939e-139
LR134228.1\|VEC66945.1\|1078661_1078910_+\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	2.43005e-47
LR134228.1\|VEC66973.1\|1094177_1094957_+\|electron-transfer-flavoprotein-subunit-YgcR	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
LR134228.1\|VEC66963.1\|1087358_1088837_-\|putative-sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
LR134228.1\|VEC66941.1\|1075000_1076302_+\|23s-rRNA-(uracil-5-)-methyltransferase	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LR134228.1\|VEC66969.1\|1091314_1092769_+\|putative-FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82

>LR134228.1|VEC66959.1|1084582_1085254_+|7-carboxy-7-deazaguanine-synthase;-queosine-biosynthesis
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>LR134228.1|VEC66957.1|1084303_1084444_-|small-protein-involved-in-the-cell-envelope-stress-response
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>LR134228.1|VEC66955.1|1083417_1084290_-|protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>LR134228.1|VEC66953.1|1082059_1083358_+|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LR134228.1|VEC66951.1|1080334_1081972_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>LR134228.1|VEC66949.1|1079315_1080107_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>LR134228.1|VEC66947.1|1078909_1079245_+|toxin-ChpA
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>LR134228.1|VEC66945.1|1078661_1078910_+|antitoxin-MazE
MIHSSVKRWGNSPAVRIPTTLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>LR134228.1|VEC66943.1|1076349_1078584_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>LR134228.1|VEC66941.1|1075000_1076302_+|23s-rRNA-(uracil-5-)-methyltransferase
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>LR134228.1|VEC66963.1|1087358_1088837_-|putative-sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>LR134228.1|VEC66965.1|1088863_1090141_-|major-facilitator-superfamily-protein
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>LR134228.1|VEC66967.1|1090459_1091245_+|putative-short-chain-dehydrogenase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASQASNYVNGHLLVVDGGYLVR
>LR134228.1|VEC66969.1|1091314_1092769_+|putative-FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>LR134228.1|VEC66971.1|1092790_1094200_+|major-facilitator-superfamily-protein
MTGRCLFGFSGEQPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>LR134228.1|VEC66973.1|1094177_1094957_+|electron-transfer-flavoprotein-subunit-YgcR
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>LR134228.1|VEC66975.1|1094953_1095814_+|electron-transfer-flavoprotein-subunit-YgcQ
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>LR134228.1|VEC66977.1|1095961_1096537_-|glycerol-antiterminator-regulatory-protein
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>LR134228.1|VEC66979.1|1096553_1096814_-|ferredoxin-like-protein-YgcO
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>LR134228.1|VEC66981.1|1096804_1098076_-|putative-FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: LR134228_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_2

1112925-1113868

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GNGTTCCCCGCGTCAGCGGGGATAAACCG	CRT
GTTCCCCGCGTCAGCGGGGATAAACCG	PILER-CR

15 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LR134228_2

>merge|LR134228|2|1112925-1113868|CRISPRCasFinder,CRT,PILER-CR
GAGTTCCCCGCGTCAGCGGGGATAAACCGAAATATTAGGGTTTCGCGCTACGTTCGACACCGAGTTCCCCGCGTCAGCGGGGATAAACCGGGCCGTATTAGCGGCCCGGTGTTATCGCTGGTGAGTTCCCCGCGTCAGCGGGGATAAACCGGCGGGGATTTGTTGGCGAAACAGGTCGGCGTCGAGTTCCCCGCGTCAGCGGGGATAAACCGAAATTATTTTTTGGGTGTTAAAAACCAGATTCGAGTTCCCCGCGTCAGCGGGGATAAACCGCCCTCGATCTCGATGCCCAATCGCACAGCGTCGAGTTCCCCGCGTCAGCGGGGATAAACCGGTTGGTGGGGTGAGCAGTTCGCCGACGACCCGGAGTTCCCCGCGTCAGCGGGGATAAACCGCGCGTTGAATATCTGGTTGATAGCGCCAGAAAGAGTTCCCCGCGTCAGCGGGGATAAACCGGATTTATTCTAAACAATGTCCACATTGTGACCGAGTTCCCCGCGTCAGCGGGGATAAACCGTTGCGCGGGTGCGAAAGTTGACGGTGGATGAAGAGTTCCCCGCGTCAGCGGGGATAAACCGAGATTGGTTTTCCAGTCTTTGGCGGTTGGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTTTTAGAGATGTGTATTCAAAATCAGATAGGAGTTCCCCGCGTCAGCGGGGATAAACCGAAATTGATCCCAGGGTGATTATCGTGGGGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTCTTTAATTATTTAGCTGATGCTTTTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGTGTGTTCCCCGCGTCAGCGGGGATAAACCG

>LR134228|2|2|1112925-1113868|CRISPRCasFinder
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATATTAGGGTTTCGCGCTACGTTCGACACC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GGCCGTATTAGCGGCCCGGTGTTATCGCTGGT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GCGGGGATTTGTTGGCGAAACAGGTCGGCGTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTATTTTTTGGGTGTTAAAAACCAGATTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CCCTCGATCTCGATGCCCAATCGCACAGCGTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GTTGGTGGGGTGAGCAGTTCGCCGACGACCCG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CGCGTTGAATATCTGGTTGATAGCGCCAGAAA
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GATTTATTCTAAACAATGTCCACATTGTGACC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCGCGGGTGCGAAAGTTGACGGTGGATGAA
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>LR134228|2|2|1112925-1113868|CRT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATATTAGGGTTTCGCGCTACGTTCGACACC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GGCCGTATTAGCGGCCCGGTGTTATCGCTGGT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GCGGGGATTTGTTGGCGAAACAGGTCGGCGTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTATTTTTTGGGTGTTAAAAACCAGATTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CCCTCGATCTCGATGCCCAATCGCACAGCGTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GTTGGTGGGGTGAGCAGTTCGCCGACGACCCG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CGCGTTGAATATCTGGTTGATAGCGCCAGAAA
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GATTTATTCTAAACAATGTCCACATTGTGACC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCGCGGGTGCGAAAGTTGACGGTGGATGAA
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>LR134228|2|3|1112927-1113868|PILER-CR
GTTCCCCGCGTCAGCGGGGATAAACCG	AAATATTAGGGTTTCGCGCTACGTTCGACACCGA
GTTCCCCGCGTCAGCGGGGATAAACCG	GGCCGTATTAGCGGCCCGGTGTTATCGCTGGTGA
GTTCCCCGCGTCAGCGGGGATAAACCG	GCGGGGATTTGTTGGCGAAACAGGTCGGCGTCGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AAATTATTTTTTGGGTGTTAAAAACCAGATTCGA
GTTCCCCGCGTCAGCGGGGATAAACCG	CCCTCGATCTCGATGCCCAATCGCACAGCGTCGA
GTTCCCCGCGTCAGCGGGGATAAACCG	GTTGGTGGGGTGAGCAGTTCGCCGACGACCCGGA
GTTCCCCGCGTCAGCGGGGATAAACCG	CGCGTTGAATATCTGGTTGATAGCGCCAGAAAGA
GTTCCCCGCGTCAGCGGGGATAAACCG	GATTTATTCTAAACAATGTCCACATTGTGACCGA
GTTCCCCGCGTCAGCGGGGATAAACCG	TTGCGCGGGTGCGAAAGTTGACGGTGGATGAAGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAGGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGTGT
GTTCCCCGCGTCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC67013.1\|1117575_1118181_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
LR134228.1\|VEC67005.1\|1112534_1112819_+\|CRISPR-associated-protein-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
LR134228.1\|VEC67017.1\|1118747_1119059_+\|cell-division-protein	unknown	unknown	gnl\|CDD\|179156
LR134228.1\|VEC67011.1\|1116148_1117576_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
LR134228.1\|VEC67015.1\|1118230_1118554_+\|putative-cytochrome-oxidase-subunit	unknown	unknown	gnl\|CDD\|371891
LR134228.1\|VEC66989.1\|1102419_1103154_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LR134228.1\|VEC66995.1\|1108493_1109096_+\|putative-CRISPR-associated-protein	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
LR134228.1\|VEC67009.1\|1115238_1116147_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235375
LR134228.1\|VEC67023.1\|1120263_1121313_+\|tRNA-pseudouridine-synthase-D	unknown	unknown	gnl\|CDD\|234884
LR134228.1\|VEC66997.1\|1109118_1110177_+\|putative-CRISPR-associated-protein	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LR134228.1\|VEC67003.1\|1111615_1112533_+\|putative-CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LR134228.1\|VEC67001.1\|1110911_1111619_+\|putative-CRISPR-associated-protein	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
LR134228.1\|VEC66993.1\|1106941_1108504_+\|putative-CRISPR-associated-protein	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
LR134228.1\|VEC67007.1\|1113949_1114987_-\|alkaline-phosphatase-isozyme-conversion-protein	unknown	unknown	gnl\|CDD\|182299
LR134228.1\|VEC66999.1\|1110189_1110912_+\|putative-CRISPR-associated-protein-Cas5	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
LR134228.1\|VEC66991.1\|1103634_1106331_-\|putative-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LR134228.1\|VEC67021.1\|1119787_1120267_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LR134228.1\|VEC67019.1\|1119077_1119788_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LR134228.1\|VEC67025.1\|1121293_1122055_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LR134228.1\|VEC66987.1\|1100633_1102346_+\|sulfite-reductase-(NADPH)-hemoprotein-beta-subunit	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC67013.1\|1117575_1118181_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
LR134228.1\|VEC67005.1\|1112534_1112819_+\|CRISPR-associated-protein-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62
LR134228.1\|VEC67017.1\|1118747_1119059_+\|cell-division-protein	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
LR134228.1\|VEC67011.1\|1116148_1117576_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LR134228.1\|VEC67015.1\|1118230_1118554_+\|putative-cytochrome-oxidase-subunit	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
LR134228.1\|VEC66989.1\|1102419_1103154_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.61111e-137
LR134228.1\|VEC66995.1\|1108493_1109096_+\|putative-CRISPR-associated-protein	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.30913e-27
LR134228.1\|VEC67009.1\|1115238_1116147_+\|sulfate-adenylyltransferase	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LR134228.1\|VEC67023.1\|1120263_1121313_+\|tRNA-pseudouridine-synthase-D	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LR134228.1\|VEC66997.1\|1109118_1110177_+\|putative-CRISPR-associated-protein	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.88893e-117
LR134228.1\|VEC67003.1\|1111615_1112533_+\|putative-CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.34057e-159
LR134228.1\|VEC67001.1\|1110911_1111619_+\|putative-CRISPR-associated-protein	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	2.49477e-67
LR134228.1\|VEC66993.1\|1106941_1108504_+\|putative-CRISPR-associated-protein	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.49031e-155
LR134228.1\|VEC67007.1\|1113949_1114987_-\|alkaline-phosphatase-isozyme-conversion-protein	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LR134228.1\|VEC66999.1\|1110189_1110912_+\|putative-CRISPR-associated-protein-Cas5	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.61359e-45
LR134228.1\|VEC66991.1\|1103634_1106331_-\|putative-helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.55657e-132
LR134228.1\|VEC67021.1\|1119787_1120267_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
LR134228.1\|VEC67019.1\|1119077_1119788_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
LR134228.1\|VEC67025.1\|1121293_1122055_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.06341e-148
LR134228.1\|VEC66987.1\|1100633_1102346_+\|sulfite-reductase-(NADPH)-hemoprotein-beta-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>LR134228.1|VEC67005.1|1112534_1112819_+|CRISPR-associated-protein-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>LR134228.1|VEC67003.1|1111615_1112533_+|putative-CRISPR-associated-protein-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>LR134228.1|VEC67001.1|1110911_1111619_+|putative-CRISPR-associated-protein
MYLSRIQLRFNQLQPEMLKKWDAATPYASHQWLWQLFPDQEKRPFLFRQEARGGFFMLSSTPPLAQHSLFIIETKLFKPQLALGLVLDFQLRANPVITRNGKRSDVMMNAKYLAKMNDVPKEHWWELQQQAAQEWLEKQGEQHGFRLIPQEADEFAQWAGEEYQAMNERCGCVKGYQQYRFIRRNNENPIAYSSVDFAGTLCITDVMQFENALFAGLGKSKAMGCGLLMVKRAAQ
>LR134228.1|VEC66999.1|1110189_1110912_+|putative-CRISPR-associated-protein-Cas5
MEYLVFQLYAPLASWGVEAPGEIRHSAKVPTRSALLGLLCAALGIRRDEEEKLNAFNQHYHFAIHALASRERWLRDYHTVSAPRENKKYRYYTRRDEICLDRDEVSTLISQREYRCDGYWHIALSATPDAPVSLQAICEALVSPCFPLYLGRKSCPLALPLAPRLMSGSLKDVLIQASQELMPDELRGFTLSEGMCYWDDPDETSLTCQQKLRSNHQPLSRQRWQFGSYTQFLGSLKESA
>LR134228.1|VEC66997.1|1109118_1110177_+|putative-CRISPR-associated-protein
MTTFIQLHLLTAYAPANLNRDESGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEDAMEGFIGKRTRRIGVDYVYRPMKDAGVGEKTAKIAAEKIAAQFGKLKNDKTAPVEKNLEIEQIVHVSRHEISLIKALVASLIDENREPTDDEVKLLRKEKRSVDMAMFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYICISRDLLVKNLDGNEELAKRAIAAFTETALTVSPTGKQNSFASRAYATYALAEIGQKQPRSLAAAFFQPVRDSDQIATAITRLKQQRASFDNVYGNCADDYIELNVLENKGKKEDLLAFVSQ
>LR134228.1|VEC66995.1|1108493_1109096_+|putative-CRISPR-associated-protein
MMNSHTAALRRITQPAAQTELLEWFRSLSERYAENNAQRNNGRAWRAELKRMQIPYGVMMCEGYNALRQRMNAHMSLGPLEQMALALFVCVAVHVKSHKEKLSFAAQLGEKINGSTPCFSTLRFERLQKSVEPEDFCRQLIHAVKIRGMDGVNILSLADSIFLWMEEWQRRENDVPETTHPFERNKIRWANEYISNYHVK
>LR134228.1|VEC66993.1|1106941_1108504_+|putative-CRISPR-associated-protein
MDLTREKWLPVVLTNGERTKISLVDLLNDSIHDVAWPRADFQGAAWEMLIGLLTVTVPPKDDEDWEEVWDEGIEPEVWEKALQKIAPVLQFGAQKPSFLQSFEPLDSEYGSISGLLIDAPGGNTLKLNKDHFVKRGVVEHICPHCAAIALYTIQTNSPAGGAGYRVGMRGGGPQTTLVVPQEEAKYPLWKKLWLNVLPQTKMPALADFPLIFPWIAPTITSDKKGNIVTPDNSHYLQAYWGMPRRIELDFTHTENGICDLCGEHHEALLLQMRSKNYGVQYDGWIHPFSPYRQAVKDPSAPWLALKGQPGGLSYRDWLGLILEREDKFNKMQPAKVVRIFAKQKNLGLWCFAWDMDNAKARCWYQHRLPLVCVTHQDQFVSVLNSVLNLATESLSLLKTALKSAWFENPKEAKVDFSMVEIAFWQETEASFRSLFNVLVNDPQRSEKNTRNALRQWEAELHTYIVNVFDWDAFSDPDCPDKILLRQLNARQVLINFYRKSKALKDVLALAEEQKDAKHDE
>LR134228.1|VEC66991.1|1103634_1106331_-|putative-helicase-Cas3
MTTSILPDYLRYWGKTNKHIENNSDAYHLLAYHCLDVAACGYYIIKYNIFNSKHKLCECNIKDTDAEKFIAWIFATHDIGKFARGFQKYALFPDAPLVPPVSGIAALERHDSLGFYLWQLLIEDWENESNNILSVSDDRHKFKTALNSWILITTGHHGIPPDTLRNNSSLAFTDKDIIAAKIYLEDLQHLFPFQLPEEWKNKIAKKQLKKQSWFFAGIMTLADWMGSDQENFPLISTPMSLTDYWPKACEKAQRAIAMLPPLSAINPYSNHKTLFPFIQTLTPLQQRAATLDISTSGPQLVILEDVTGAGKTEAALILTHRMMSAHKGNGVYIGLPTMATSNAMYQRMASAYHALYVNESRPSLVLAHGGREMSDAFRHSIWQPLSEKSEDYGHDDKNASGECHAWFADSRKKALLAEVGVGTIDQLLMAVMPFRHQSLRLLGIQNKILLLDEVHAYDGYMVKLLEGLLNFHAAQGGSAIILSATLPAGLREKLLLAFNEGAGFPLPDINPDAGYPWLSSLSGIGLEEQLLNTRQEVQRTVKINWLTQRSDAFEIIHRAVTSGQCICWIRNTVDDALEIFQTLIQQGQIPENDILLFHSRFAFADRMAIEENTLDWFGKNANSSTRRGKILIATQVVEQSLDLDFDWMISDLAPIDLLIQRAGRLQRHIRNAEGDRKDSLPDERQPPLLYILAPEWQPDAKAGWLGAELKGTGYVYPDHATLWRTQTLLRQHGEIRMPDLARTLVDGVYESKITAPASLETISDLAFGKVLCQRSVAGQNLLRHEKGYGREASDFLWDTEREFSTRLGEESVDIYLAWKDQHSELHPIVTTGDFRWEMSRLPVRLSWWKKMSSKFQLLNDEELELFRTKQHRPMGQVILVSEAGESPYYNKRIGLIGS
>LR134228.1|VEC66989.1|1102419_1103154_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LR134228.1|VEC66987.1|1100633_1102346_+|sulfite-reductase-(NADPH)-hemoprotein-beta-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNSYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>LR134228.1|VEC67007.1|1113949_1114987_-|alkaline-phosphatase-isozyme-conversion-protein
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>LR134228.1|VEC67009.1|1115238_1116147_+|sulfate-adenylyltransferase
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>LR134228.1|VEC67011.1|1116148_1117576_+|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>LR134228.1|VEC67013.1|1117575_1118181_+|adenosine-5-phosphosulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>LR134228.1|VEC67015.1|1118230_1118554_+|putative-cytochrome-oxidase-subunit
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>LR134228.1|VEC67017.1|1118747_1119059_+|cell-division-protein
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>LR134228.1|VEC67019.1|1119077_1119788_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>LR134228.1|VEC67021.1|1119787_1120267_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>LR134228.1|VEC67023.1|1120263_1121313_+|tRNA-pseudouridine-synthase-D
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>LR134228.1|VEC67025.1|1121293_1122055_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFTALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: LR134228_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_3

1614323-1614440

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134228_3

>merge|LR134228|3|1614323-1614440|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>LR134228|3|3|1614323-1614440|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC67703.1\|1612841_1613096_-\|putative-ferredoxin	unknown	unknown	gnl\|CDD\|182668
LR134228.1\|VEC67707.1\|1621320_1622043_-\|3-demethylubiquinone-9-3-methyltransferase	unknown	unknown	gnl\|CDD\|235350
LR134228.1\|VEC67711.1\|1627417_1631812_+\|large-extracellular-alpha-helical-protein	unknown	unknown	gnl\|CDD\|225248
LR134228.1\|VEC67714.1\|1634316_1635501_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
LR134228.1\|VEC67702.1\|1612137_1612788_+\|pH-inducible-protein-involved-in-stress-response-(putative-kinase)	unknown	unknown	gnl\|CDD\|182136
LR134228.1\|VEC67712.1\|1631812_1633462_+\|protein	unknown	unknown	gnl\|CDD\|227732
LR134228.1\|VEC67697.1\|1606085_1607345_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	unknown	unknown	gnl\|CDD\|225617
LR134228.1\|VEC67708.1\|1622189_1624817_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
LR134228.1\|VEC67700.1\|1610598_1611675_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
LR134228.1\|VEC67713.1\|1633466_1634243_+\|DUF2135-family-protein,-function-uncharacterised	unknown	unknown	gnl\|CDD\|227021
LR134228.1\|VEC67704.1\|1613095_1614226_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
LR134228.1\|VEC67706.1\|1617488_1621193_+\|adhesin	unknown	unknown	gnl\|CDD\|182059
LR134228.1\|VEC67695.1\|1603806_1604706_-\|putative-transposase	unknown	unknown	gnl\|CDD\|182167
LR134228.1\|VEC67699.1\|1609235_1610594_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
LR134228.1\|VEC67698.1\|1607334_1608963_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
LR134228.1\|VEC67701.1\|1611716_1611923_-\|yfaH	unknown	unknown	gnl\|CDD\|182050
LR134228.1\|VEC67709.1\|1624965_1626654_+\|putative-membrane-protein-YfaA	unknown	unknown	gnl\|CDD\|227030
LR134228.1\|VEC67696.1\|1604898_1606089_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
LR134228.1\|VEC67705.1\|1614459_1616745_-\|ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|181649
LR134228.1\|VEC67710.1\|1626650_1627274_+\|protein	unknown	unknown	gnl\|CDD\|225774

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC67703.1\|1612841_1613096_-\|putative-ferredoxin	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
LR134228.1\|VEC67707.1\|1621320_1622043_-\|3-demethylubiquinone-9-3-methyltransferase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.65303e-171
LR134228.1\|VEC67711.1\|1627417_1631812_+\|large-extracellular-alpha-helical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
LR134228.1\|VEC67714.1\|1634316_1635501_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
LR134228.1\|VEC67702.1\|1612137_1612788_+\|pH-inducible-protein-involved-in-stress-response-(putative-kinase)	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
LR134228.1\|VEC67712.1\|1631812_1633462_+\|protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.75964e-127
LR134228.1\|VEC67697.1\|1606085_1607345_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
LR134228.1\|VEC67708.1\|1622189_1624817_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
LR134228.1\|VEC67700.1\|1610598_1611675_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
LR134228.1\|VEC67713.1\|1633466_1634243_+\|DUF2135-family-protein,-function-uncharacterised	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	8.55833e-153
LR134228.1\|VEC67704.1\|1613095_1614226_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
LR134228.1\|VEC67706.1\|1617488_1621193_+\|adhesin	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
LR134228.1\|VEC67695.1\|1603806_1604706_-\|putative-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
LR134228.1\|VEC67699.1\|1609235_1610594_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
LR134228.1\|VEC67698.1\|1607334_1608963_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
LR134228.1\|VEC67701.1\|1611716_1611923_-\|yfaH	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.13329e-36
LR134228.1\|VEC67709.1\|1624965_1626654_+\|putative-membrane-protein-YfaA	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
LR134228.1\|VEC67696.1\|1604898_1606089_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
LR134228.1\|VEC67705.1\|1614459_1616745_-\|ribonucleoside-diphosphate-reductase	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
LR134228.1\|VEC67710.1\|1626650_1627274_+\|protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141

>LR134228.1|VEC67704.1|1613095_1614226_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>LR134228.1|VEC67703.1|1612841_1613096_-|putative-ferredoxin
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>LR134228.1|VEC67702.1|1612137_1612788_+|pH-inducible-protein-involved-in-stress-response-(putative-kinase)
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>LR134228.1|VEC67701.1|1611716_1611923_-|yfaH
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
>LR134228.1|VEC67700.1|1610598_1611675_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>LR134228.1|VEC67699.1|1609235_1610594_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>LR134228.1|VEC67698.1|1607334_1608963_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>LR134228.1|VEC67697.1|1606085_1607345_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>LR134228.1|VEC67696.1|1604898_1606089_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>LR134228.1|VEC67695.1|1603806_1604706_-|putative-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>LR134228.1|VEC67705.1|1614459_1616745_-|ribonucleoside-diphosphate-reductase
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>LR134228.1|VEC67706.1|1617488_1621193_+|adhesin
MIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFPTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>LR134228.1|VEC67707.1|1621320_1622043_-|3-demethylubiquinone-9-3-methyltransferase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>LR134228.1|VEC67708.1|1622189_1624817_+|DNA-gyrase-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>LR134228.1|VEC67709.1|1624965_1626654_+|putative-membrane-protein-YfaA
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>LR134228.1|VEC67710.1|1626650_1627274_+|protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>LR134228.1|VEC67711.1|1627417_1631812_+|large-extracellular-alpha-helical-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>LR134228.1|VEC67712.1|1631812_1633462_+|protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>LR134228.1|VEC67713.1|1633466_1634243_+|DUF2135-family-protein,-function-uncharacterised
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDIDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>LR134228.1|VEC67714.1|1634316_1635501_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: LR134228_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_4

2265963-2266086

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134228_4

>merge|LR134228|4|2265963-2266086|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>LR134228|4|4|2265963-2266086|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC68514.1\|2276641_2277223_-\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|182534
LR134228.1\|VEC68503.1\|2269285_2269927_+\|riboflavin-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183846
LR134228.1\|VEC68501.1\|2267697_2269071_-\|multidrug-resistance-protein	unknown	unknown	gnl\|CDD\|234981
LR134228.1\|VEC68488.1\|2259500_2260139_+\|putative-oxidoreductase-subunit	unknown	unknown	gnl\|CDD\|182160
LR134228.1\|VEC68507.1\|2271405_2272617_-\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|182924
LR134228.1\|VEC68497.1\|2265061_2265397_-\|outer-membrane-usher-protein-FimD	unknown	unknown	gnl\|CDD\|182134
LR134228.1\|VEC68511.1\|2273658_2274684_-\|purine-nucleotide-synthesis-repressor	unknown	unknown	gnl\|CDD\|236739
LR134228.1\|VEC68480.1\|2254105_2255518_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|181699
LR134228.1\|VEC68489.1\|2260202_2260871_+\|putative-oxidoreductase-Fe-S-subunit	unknown	unknown	gnl\|CDD\|274451
LR134228.1\|VEC68513.1\|2275237_2276407_+\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|225371
LR134228.1\|VEC68484.1\|2256738_2257365_+\|putative-oxidoreductase-Fe-S-subunit	unknown	unknown	gnl\|CDD\|182135
LR134228.1\|VEC68495.1\|2262479_2263658_-\|conserved-protein-with-FAD/NAD(P)-binding-domain	unknown	unknown	gnl\|CDD\|182134
LR134228.1\|VEC68515.1\|2277350_2278166_-\|putative-exported-hydrolase	unknown	unknown	gnl\|CDD\|366353
LR134228.1\|VEC68493.1\|2261703_2262468_+\|putative-oxidoreductase-subunit	unknown	unknown	gnl\|CDD\|182159
LR134228.1\|VEC68499.1\|2266400_2267657_+\|Fluffing-protein	unknown	unknown	gnl\|CDD\|137602
LR134228.1\|VEC68486.1\|2257385_2259488_+\|putative-aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
LR134228.1\|VEC68482.1\|2256074_2256284_+\|protein	unknown	unknown	gnl\|CDD\|182359
LR134228.1\|VEC68509.1\|2272729_2273662_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
LR134228.1\|VEC68491.1\|2260867_2261458_+\|putative-oxidoreductase,-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|184968
LR134228.1\|VEC68505.1\|2269966_2271115_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC68514.1\|2276641_2277223_-\|superoxide-dismutase	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
LR134228.1\|VEC68503.1\|2269285_2269927_+\|riboflavin-synthase-subunit-alpha	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
LR134228.1\|VEC68501.1\|2267697_2269071_-\|multidrug-resistance-protein	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
LR134228.1\|VEC68488.1\|2259500_2260139_+\|putative-oxidoreductase-subunit	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	7.60222e-120
LR134228.1\|VEC68507.1\|2271405_2272617_-\|major-facilitator-superfamily-protein	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
LR134228.1\|VEC68497.1\|2265061_2265397_-\|outer-membrane-usher-protein-FimD	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	6.85369e-36
LR134228.1\|VEC68511.1\|2273658_2274684_-\|purine-nucleotide-synthesis-repressor	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
LR134228.1\|VEC68480.1\|2254105_2255518_-\|pyruvate-kinase	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
LR134228.1\|VEC68489.1\|2260202_2260871_+\|putative-oxidoreductase-Fe-S-subunit	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
LR134228.1\|VEC68513.1\|2275237_2276407_+\|major-facilitator-superfamily-protein	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
LR134228.1\|VEC68484.1\|2256738_2257365_+\|putative-oxidoreductase-Fe-S-subunit	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
LR134228.1\|VEC68495.1\|2262479_2263658_-\|conserved-protein-with-FAD/NAD(P)-binding-domain	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
LR134228.1\|VEC68515.1\|2277350_2278166_-\|putative-exported-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	7.77757e-47
LR134228.1\|VEC68493.1\|2261703_2262468_+\|putative-oxidoreductase-subunit	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.81426e-163
LR134228.1\|VEC68499.1\|2266400_2267657_+\|Fluffing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
LR134228.1\|VEC68486.1\|2257385_2259488_+\|putative-aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
LR134228.1\|VEC68482.1\|2256074_2256284_+\|protein	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
LR134228.1\|VEC68509.1\|2272729_2273662_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
LR134228.1\|VEC68491.1\|2260867_2261458_+\|putative-oxidoreductase,-cytochrome-b-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.6686e-74
LR134228.1\|VEC68505.1\|2269966_2271115_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0

>LR134228.1|VEC68497.1|2265061_2265397_-|outer-membrane-usher-protein-FimD
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIAMNRPGFPGECFICELRLPDHRFRWKHNKLFLLLPVGYGPAFPAIVDCYTSPPT
>LR134228.1|VEC68495.1|2262479_2263658_-|conserved-protein-with-FAD/NAD(P)-binding-domain
MLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>LR134228.1|VEC68493.1|2261703_2262468_+|putative-oxidoreductase-subunit
MYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>LR134228.1|VEC68491.1|2260867_2261458_+|putative-oxidoreductase,-cytochrome-b-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGVMATTIAFVVRVGWSGRQNKRDFICLALCRGKNILSRQQPSLNLIPYSRLPMLVSCMDCCRCYY
>LR134228.1|VEC68489.1|2260202_2260871_+|putative-oxidoreductase-Fe-S-subunit
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>LR134228.1|VEC68488.1|2259500_2260139_+|putative-oxidoreductase-subunit
MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>LR134228.1|VEC68486.1|2257385_2259488_+|putative-aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>LR134228.1|VEC68484.1|2256738_2257365_+|putative-oxidoreductase-Fe-S-subunit
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>LR134228.1|VEC68482.1|2256074_2256284_+|protein
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>LR134228.1|VEC68480.1|2254105_2255518_-|pyruvate-kinase
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>LR134228.1|VEC68499.1|2266400_2267657_+|Fluffing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>LR134228.1|VEC68501.1|2267697_2269071_-|multidrug-resistance-protein
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRMPSAIILQRASR
>LR134228.1|VEC68503.1|2269285_2269927_+|riboflavin-synthase-subunit-alpha
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>LR134228.1|VEC68505.1|2269966_2271115_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>LR134228.1|VEC68507.1|2271405_2272617_-|major-facilitator-superfamily-protein
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGFQNHGNAEVAHSESH
>LR134228.1|VEC68509.1|2272729_2273662_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>LR134228.1|VEC68511.1|2273658_2274684_-|purine-nucleotide-synthesis-repressor
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>LR134228.1|VEC68513.1|2275237_2276407_+|major-facilitator-superfamily-protein
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>LR134228.1|VEC68514.1|2276641_2277223_-|superoxide-dismutase
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
>LR134228.1|VEC68515.1|2277350_2278166_-|putative-exported-hydrolase
MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR

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Crispr_ID: LR134228_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_6

3175468-3175673

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAACG	PILER-CR

3 spacers

The CRISPR arrays of LR134228_6

>merge|LR134228|6|3175468-3175673|CRISPRCasFinder,CRT,PILER-CR
CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAATTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACT

>LR134228|6|6|3175468-3175672|CRISPRCasFinder
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>LR134228|6|3|3175468-3175672|CRT
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>LR134228|6|4|3175524-3175673|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC69366.1\|3173875_3174580_+\|leucyl/phenylalanyl-tRNA-protein-transferase	unknown	unknown	gnl\|CDD\|234720
LR134228.1\|VEC69376.1\|3186564_3187464_+\|transporter	unknown	unknown	gnl\|CDD\|225287
LR134228.1\|VEC69365.1\|3172112_3173834_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|236865
LR134228.1\|VEC69358.1\|3160552_3161845_-\|seryl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235461
LR134228.1\|VEC69367.1\|3174864_3175083_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
LR134228.1\|VEC69374.1\|3183292_3184951_-\|nucleoside-triphosphate-hydrolase-domain	unknown	unknown	gnl\|CDD\|226121
LR134228.1\|VEC69369.1\|3178190_3178511_-\|ATP-dependent-Clp-protease-adaptor-protein	unknown	unknown	gnl\|CDD\|178809
LR134228.1\|VEC69364.1\|3170345_3172112_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|236870
LR134228.1\|VEC69371.1\|3179130_3181077_-\|macrolide-export-ATP-binding/permease-protein	unknown	unknown	gnl\|CDD\|182528
LR134228.1\|VEC69375.1\|3185374_3186070_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
LR134228.1\|VEC69363.1\|3169257_3170223_+\|thioredoxin-reductase	unknown	unknown	gnl\|CDD\|182343
LR134228.1\|VEC69372.1\|3181073_3182189_-\|macrolide-specific-efflux-protein	unknown	unknown	gnl\|CDD\|183211
LR134228.1\|VEC69359.1\|3161935_3163279_-\|putative-ATPase	unknown	unknown	gnl\|CDD\|237355
LR134228.1\|VEC69361.1\|3164055_3168084_-\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|236669
LR134228.1\|VEC69368.1\|3175883_3178160_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|236828
LR134228.1\|VEC69373.1\|3182303_3183296_+\|virulence-protein	unknown	unknown	gnl\|CDD\|225537
LR134228.1\|VEC69360.1\|3163289_3163901_-\|outer-membrane-lipoprotein-carrier-protein	unknown	unknown	gnl\|CDD\|129638
LR134228.1\|VEC69362.1\|3168218_3168713_-\|leucine-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
LR134228.1\|VEC69370.1\|3178833_3179058_+\|stationary-phase/starvation-inducible-regulatory-protein-CspD	unknown	unknown	gnl\|CDD\|77494
LR134228.1\|VEC69377.1\|3187607_3189260_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC69366.1\|3173875_3174580_+\|leucyl/phenylalanyl-tRNA-protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.45002e-139
LR134228.1\|VEC69376.1\|3186564_3187464_+\|transporter	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.37433e-118
LR134228.1\|VEC69365.1\|3172112_3173834_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
LR134228.1\|VEC69358.1\|3160552_3161845_-\|seryl-tRNA-synthetase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
LR134228.1\|VEC69367.1\|3174864_3175083_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
LR134228.1\|VEC69374.1\|3183292_3184951_-\|nucleoside-triphosphate-hydrolase-domain	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
LR134228.1\|VEC69369.1\|3178190_3178511_-\|ATP-dependent-Clp-protease-adaptor-protein	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
LR134228.1\|VEC69364.1\|3170345_3172112_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
LR134228.1\|VEC69371.1\|3179130_3181077_-\|macrolide-export-ATP-binding/permease-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
LR134228.1\|VEC69375.1\|3185374_3186070_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.72314e-144
LR134228.1\|VEC69363.1\|3169257_3170223_+\|thioredoxin-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
LR134228.1\|VEC69372.1\|3181073_3182189_-\|macrolide-specific-efflux-protein	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
LR134228.1\|VEC69359.1\|3161935_3163279_-\|putative-ATPase	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
LR134228.1\|VEC69361.1\|3164055_3168084_-\|cell-division-protein-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
LR134228.1\|VEC69368.1\|3175883_3178160_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
LR134228.1\|VEC69373.1\|3182303_3183296_+\|virulence-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	8.48293e-133
LR134228.1\|VEC69360.1\|3163289_3163901_-\|outer-membrane-lipoprotein-carrier-protein	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
LR134228.1\|VEC69362.1\|3168218_3168713_-\|leucine-responsive-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
LR134228.1\|VEC69370.1\|3178833_3179058_+\|stationary-phase/starvation-inducible-regulatory-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
LR134228.1\|VEC69377.1\|3187607_3189260_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0

>LR134228.1|VEC69367.1|3174864_3175083_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>LR134228.1|VEC69366.1|3173875_3174580_+|leucyl/phenylalanyl-tRNA-protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>LR134228.1|VEC69365.1|3172112_3173834_+|ABC-transporter-ATP-binding-protein/permease
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>LR134228.1|VEC69364.1|3170345_3172112_+|ABC-transporter-ATP-binding-protein/permease
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI
>LR134228.1|VEC69363.1|3169257_3170223_+|thioredoxin-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>LR134228.1|VEC69362.1|3168218_3168713_-|leucine-responsive-transcriptional-regulator
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>LR134228.1|VEC69361.1|3164055_3168084_-|cell-division-protein-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQSVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>LR134228.1|VEC69360.1|3163289_3163901_-|outer-membrane-lipoprotein-carrier-protein
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>LR134228.1|VEC69359.1|3161935_3163279_-|putative-ATPase
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>LR134228.1|VEC69358.1|3160552_3161845_-|seryl-tRNA-synthetase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>LR134228.1|VEC69368.1|3175883_3178160_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKAKNELTYGFQSAQKHKAEAAH
>LR134228.1|VEC69369.1|3178190_3178511_-|ATP-dependent-Clp-protease-adaptor-protein
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>LR134228.1|VEC69370.1|3178833_3179058_+|stationary-phase/starvation-inducible-regulatory-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>LR134228.1|VEC69371.1|3179130_3181077_-|macrolide-export-ATP-binding/permease-protein
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>LR134228.1|VEC69372.1|3181073_3182189_-|macrolide-specific-efflux-protein
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>LR134228.1|VEC69373.1|3182303_3183296_+|virulence-protein
MVKSTSCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>LR134228.1|VEC69374.1|3183292_3184951_-|nucleoside-triphosphate-hydrolase-domain
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>LR134228.1|VEC69375.1|3185374_3186070_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPILGGIIGGLIYRTLLEKRD
>LR134228.1|VEC69376.1|3186564_3187464_+|transporter
MFSGLLIILVPLIVGYLIPLRQKAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>LR134228.1|VEC69377.1|3187607_3189260_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA

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Crispr_ID: LR134228_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_7

3300575-3300714

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134228_7

>merge|LR134228|7|3300575-3300714|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGTAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCCAGCATCGCATCCGACAATAAGTGCCG

>LR134228|7|7|3300575-3300714|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	GATGCTGCGTAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCCAGCATCGCATCCGACAATAAGTGCCG

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC69488.1\|3305930_3306884_+\|DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
LR134228.1\|VEC69477.1\|3294230_3294986_-\|biotin-biosynthesis-protein-BioC	unknown	unknown	gnl\|CDD\|182340
LR134228.1\|VEC69480.1\|3297250_3297592_+\|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	unknown	unknown	gnl\|CDD\|181189
LR134228.1\|VEC69483.1\|3299225_3300509_+\|acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
LR134228.1\|VEC69492.1\|3309954_3310644_-\|molybdenum-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841
LR134228.1\|VEC69484.1\|3300742_3303004_-\|putative-aconitase	unknown	unknown	gnl\|CDD\|183125
LR134228.1\|VEC69482.1\|3298597_3299074_+\|putative-phosphatidylethanolamine-binding-protein	unknown	unknown	gnl\|CDD\|182339
LR134228.1\|VEC69493.1\|3310643_3311417_-\|molybdate-transporter-periplasmic-protein	unknown	unknown	gnl\|CDD\|182641
LR134228.1\|VEC69491.1\|3308893_3309952_-\|molybdenum-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182993
LR134228.1\|VEC69481.1\|3297606_3298539_+\|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	unknown	unknown	gnl\|CDD\|181189
LR134228.1\|VEC69489.1\|3306924_3307920_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
LR134228.1\|VEC69476.1\|3293560_3294238_-\|dithiobiotin-synthetase	unknown	unknown	gnl\|CDD\|234625
LR134228.1\|VEC69475.1\|3290960_3292982_-\|UvrABC-system-protein-B-(excinuclease-ABC-subunit-B)	unknown	unknown	gnl\|CDD\|235395
LR134228.1\|VEC69478.1\|3294972_3296127_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
LR134228.1\|VEC69487.1\|3304694_3305747_-\|3-methylitaconate-isomerase	unknown	unknown	gnl\|CDD\|380230
LR134228.1\|VEC69486.1\|3303638_3304619_-\|putative-Sodium:sulfate-symporter	unknown	unknown	gnl\|CDD\|279307
LR134228.1\|VEC69485.1\|3303186_3303492_-\|putative-Sodium:sulfate-symporter	unknown	unknown	gnl\|CDD\|279307
LR134228.1\|VEC69479.1\|3296123_3297164_-\|biotin-synthetase	unknown	unknown	gnl\|CDD\|185063
LR134228.1\|VEC69490.1\|3308074_3308893_+\|Phosphotransferase	unknown	unknown	gnl\|CDD\|182523
LR134228.1\|VEC69474.1\|3289860_3290769_+\|transferase-with-NAD(P)-binding-Rossmann-fold-domain;-UPF0052-family	unknown	unknown	gnl\|CDD\|211689

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC69488.1\|3305930_3306884_+\|DNA-binding-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
LR134228.1\|VEC69477.1\|3294230_3294986_-\|biotin-biosynthesis-protein-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
LR134228.1\|VEC69480.1\|3297250_3297592_+\|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	1.62598e-82
LR134228.1\|VEC69483.1\|3299225_3300509_+\|acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
LR134228.1\|VEC69492.1\|3309954_3310644_-\|molybdenum-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
LR134228.1\|VEC69484.1\|3300742_3303004_-\|putative-aconitase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
LR134228.1\|VEC69482.1\|3298597_3299074_+\|putative-phosphatidylethanolamine-binding-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
LR134228.1\|VEC69493.1\|3310643_3311417_-\|molybdate-transporter-periplasmic-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
LR134228.1\|VEC69491.1\|3308893_3309952_-\|molybdenum-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
LR134228.1\|VEC69481.1\|3297606_3298539_+\|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
LR134228.1\|VEC69489.1\|3306924_3307920_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
LR134228.1\|VEC69476.1\|3293560_3294238_-\|dithiobiotin-synthetase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	3.39733e-110
LR134228.1\|VEC69475.1\|3290960_3292982_-\|UvrABC-system-protein-B-(excinuclease-ABC-subunit-B)	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
LR134228.1\|VEC69478.1\|3294972_3296127_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
LR134228.1\|VEC69487.1\|3304694_3305747_-\|3-methylitaconate-isomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
LR134228.1\|VEC69486.1\|3303638_3304619_-\|putative-Sodium:sulfate-symporter	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	4.81498e-129
LR134228.1\|VEC69485.1\|3303186_3303492_-\|putative-Sodium:sulfate-symporter	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	1.69472e-30
LR134228.1\|VEC69479.1\|3296123_3297164_-\|biotin-synthetase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
LR134228.1\|VEC69490.1\|3308074_3308893_+\|Phosphotransferase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
LR134228.1\|VEC69474.1\|3289860_3290769_+\|transferase-with-NAD(P)-binding-Rossmann-fold-domain;-UPF0052-family	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139

>LR134228.1|VEC69483.1|3299225_3300509_+|acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>LR134228.1|VEC69482.1|3298597_3299074_+|putative-phosphatidylethanolamine-binding-protein
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>LR134228.1|VEC69481.1|3297606_3298539_+|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase
MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>LR134228.1|VEC69480.1|3297250_3297592_+|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFSRTPVP
>LR134228.1|VEC69479.1|3296123_3297164_-|biotin-synthetase
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>LR134228.1|VEC69478.1|3294972_3296127_-|8-amino-7-oxononanoate-synthase
MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLVEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>LR134228.1|VEC69477.1|3294230_3294986_-|biotin-biosynthesis-protein-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>LR134228.1|VEC69476.1|3293560_3294238_-|dithiobiotin-synthetase
MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>LR134228.1|VEC69475.1|3290960_3292982_-|UvrABC-system-protein-B-(excinuclease-ABC-subunit-B)
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>LR134228.1|VEC69474.1|3289860_3290769_+|transferase-with-NAD(P)-binding-Rossmann-fold-domain;-UPF0052-family
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>LR134228.1|VEC69484.1|3300742_3303004_-|putative-aconitase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNIPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>LR134228.1|VEC69485.1|3303186_3303492_-|putative-Sodium:sulfate-symporter
MRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>LR134228.1|VEC69486.1|3303638_3304619_-|putative-Sodium:sulfate-symporter
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKIKAAGIP
>LR134228.1|VEC69487.1|3304694_3305747_-|3-methylitaconate-isomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>LR134228.1|VEC69488.1|3305930_3306884_+|DNA-binding-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>LR134228.1|VEC69489.1|3306924_3307920_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>LR134228.1|VEC69490.1|3308074_3308893_+|Phosphotransferase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>LR134228.1|VEC69491.1|3308893_3309952_-|molybdenum-ABC-transporter-ATP-binding-protein
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>LR134228.1|VEC69492.1|3309954_3310644_-|molybdenum-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>LR134228.1|VEC69493.1|3310643_3311417_-|molybdate-transporter-periplasmic-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK

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Crispr_ID: LR134228_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_8

3589827-3589923

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134228_8

>merge|LR134228|8|3589827-3589923|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>LR134228|8|8|3589827-3589923|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC69997.1\|3589956_3590850_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
LR134228.1\|VEC69989.1\|3586851_3587346_+\|peptidyl-prolyl-cis-trans-isomerase-B	unknown	unknown	gnl\|CDD\|182734
LR134228.1\|VEC70003.1\|3592941_3594609_-\|FdrA-protein	unknown	unknown	gnl\|CDD\|180395
LR134228.1\|VEC69991.1\|3587348_3588071_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420
LR134228.1\|VEC70015.1\|3600780_3602142_-\|allantoinase	unknown	unknown	gnl\|CDD\|169193
LR134228.1\|VEC69993.1\|3588188_3588698_+\|phosphoribosylaminoimidazole-carboxylase-catalytic-subunit	unknown	unknown	gnl\|CDD\|223119
LR134228.1\|VEC69979.1\|3582534_3583077_-\|fimbrial-like-protein	unknown	unknown	gnl\|CDD\|237920
LR134228.1\|VEC70001.1\|3591672_3592932_-\|putative-cytoplasmic-protein	unknown	unknown	gnl\|CDD\|377673
LR134228.1\|VEC70009.1\|3597242_3598028_+\|putative-glyoxylate-utilization	unknown	unknown	gnl\|CDD\|200251
LR134228.1\|VEC70007.1\|3595996_3597232_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
LR134228.1\|VEC69987.1\|3585292_3586678_-\|cysteinyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234705
LR134228.1\|VEC70013.1\|3599422_3600724_-\|putative-permease	unknown	unknown	gnl\|CDD\|183124
LR134228.1\|VEC69999.1\|3590846_3591662_-\|putative-carboxylase	unknown	unknown	gnl\|CDD\|378658
LR134228.1\|VEC69977.1\|3581622_3582315_-\|fimbrial-chaperone	unknown	unknown	gnl\|CDD\|185117
LR134228.1\|VEC70011.1\|3598255_3599401_-\|glycerate-kinase-II	unknown	unknown	gnl\|CDD\|182152
LR134228.1\|VEC70005.1\|3594925_3595975_+\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
LR134228.1\|VEC69995.1\|3588694_3589762_+\|phosphoribosylaminoimidazole-carboxylase-ATPase-subunit	unknown	unknown	gnl\|CDD\|235674
LR134228.1\|VEC69985.1\|3584735_3585257_+\|putative-membrane-bound-metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
LR134228.1\|VEC69981.1\|3583547_3584414_+\|5,10-methylene-tetrahydrofolate-dehydrogenase	unknown	unknown	gnl\|CDD\|236760
LR134228.1\|VEC69983.1\|3584415_3584628_+\|putative-RNA-binding-protein	unknown	unknown	gnl\|CDD\|183166

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC69997.1\|3589956_3590850_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
LR134228.1\|VEC69989.1\|3586851_3587346_+\|peptidyl-prolyl-cis-trans-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
LR134228.1\|VEC70003.1\|3592941_3594609_-\|FdrA-protein	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
LR134228.1\|VEC69991.1\|3587348_3588071_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.41122e-165
LR134228.1\|VEC70015.1\|3600780_3602142_-\|allantoinase	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
LR134228.1\|VEC69993.1\|3588188_3588698_+\|phosphoribosylaminoimidazole-carboxylase-catalytic-subunit	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	2.09217e-91
LR134228.1\|VEC69979.1\|3582534_3583077_-\|fimbrial-like-protein	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
LR134228.1\|VEC70001.1\|3591672_3592932_-\|putative-cytoplasmic-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
LR134228.1\|VEC70009.1\|3597242_3598028_+\|putative-glyoxylate-utilization	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	2.39799e-151
LR134228.1\|VEC70007.1\|3595996_3597232_+\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
LR134228.1\|VEC69987.1\|3585292_3586678_-\|cysteinyl-tRNA-synthetase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
LR134228.1\|VEC70013.1\|3599422_3600724_-\|putative-permease	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
LR134228.1\|VEC69999.1\|3590846_3591662_-\|putative-carboxylase	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	1.72094e-37
LR134228.1\|VEC69977.1\|3581622_3582315_-\|fimbrial-chaperone	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
LR134228.1\|VEC70011.1\|3598255_3599401_-\|glycerate-kinase-II	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
LR134228.1\|VEC70005.1\|3594925_3595975_+\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
LR134228.1\|VEC69995.1\|3588694_3589762_+\|phosphoribosylaminoimidazole-carboxylase-ATPase-subunit	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	8.32578e-179
LR134228.1\|VEC69985.1\|3584735_3585257_+\|putative-membrane-bound-metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
LR134228.1\|VEC69981.1\|3583547_3584414_+\|5,10-methylene-tetrahydrofolate-dehydrogenase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
LR134228.1\|VEC69983.1\|3584415_3584628_+\|putative-RNA-binding-protein	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42

>LR134228.1|VEC69995.1|3588694_3589762_+|phosphoribosylaminoimidazole-carboxylase-ATPase-subunit
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>LR134228.1|VEC69993.1|3588188_3588698_+|phosphoribosylaminoimidazole-carboxylase-catalytic-subunit
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRNAQTDEVLENPDPRGAA
>LR134228.1|VEC69991.1|3587348_3588071_+|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>LR134228.1|VEC69989.1|3586851_3587346_+|peptidyl-prolyl-cis-trans-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>LR134228.1|VEC69987.1|3585292_3586678_-|cysteinyl-tRNA-synthetase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>LR134228.1|VEC69985.1|3584735_3585257_+|putative-membrane-bound-metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>LR134228.1|VEC69983.1|3584415_3584628_+|putative-RNA-binding-protein
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>LR134228.1|VEC69981.1|3583547_3584414_+|5,10-methylene-tetrahydrofolate-dehydrogenase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>LR134228.1|VEC69979.1|3582534_3583077_-|fimbrial-like-protein
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>LR134228.1|VEC69977.1|3581622_3582315_-|fimbrial-chaperone
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>LR134228.1|VEC69997.1|3589956_3590850_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>LR134228.1|VEC69999.1|3590846_3591662_-|putative-carboxylase
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLRRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>LR134228.1|VEC70001.1|3591672_3592932_-|putative-cytoplasmic-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>LR134228.1|VEC70003.1|3592941_3594609_-|FdrA-protein
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAITPASSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>LR134228.1|VEC70005.1|3594925_3595975_+|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>LR134228.1|VEC70007.1|3595996_3597232_+|allantoate-amidohydrolase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>LR134228.1|VEC70009.1|3597242_3598028_+|putative-glyoxylate-utilization
MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>LR134228.1|VEC70011.1|3598255_3599401_-|glycerate-kinase-II
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>LR134228.1|VEC70013.1|3599422_3600724_-|putative-permease
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHLLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>LR134228.1|VEC70015.1|3600780_3602142_-|allantoinase
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDLRDVNDWQFFKGAQKLGELGQPVLVHCENALICDALGEEAKSEGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHICHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ

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Crispr_ID: LR134228_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134228_9

4102231-4102372

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134228_9

>merge|LR134228|9|4102231-4102372|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>LR134228|9|9|4102231-4102372|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
LR134228.1\|VEC70887.1\|4101602_4102193_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
LR134228.1\|VEC70870.1\|4091222_4091510_-\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|185346
LR134228.1\|VEC70876.1\|4093799_4094570_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
LR134228.1\|VEC70905.1\|4111889_4114706_-\|isoleucyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235588
LR134228.1\|VEC70874.1\|4092843_4093785_-\|electron-transfer-flavoprotein-subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|235120
LR134228.1\|VEC70881.1\|4097858_4099076_+\|crotonobetainyl-CoA:carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
LR134228.1\|VEC70891.1\|4103058_4106280_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
LR134228.1\|VEC70901.1\|4110821_4111271_-\|FkbB-type-16-kD-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
LR134228.1\|VEC70872.1\|4091506_4092793_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
LR134228.1\|VEC70903.1\|4111395_4111890_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
LR134228.1\|VEC70897.1\|4108889_4109804_-\|nonspecific-ribonucleoside-hydrolase-(purine/pyrimidine-ribonucleoside-hydrolase)	unknown	unknown	gnl\|CDD\|182713
LR134228.1\|VEC70895.1\|4107901_4108723_-\|dihydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
LR134228.1\|VEC70893.1\|4106297_4107446_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
LR134228.1\|VEC70883.1\|4099149_4100703_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
LR134228.1\|VEC70907.1\|4114748_4115690_-\|riboflavin-biosynthesis-protein-[includes:-riboflavin-kinase;-FMN-adenylyltransferase]	unknown	unknown	gnl\|CDD\|235536
LR134228.1\|VEC70878.1\|4095042_4096557_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568
LR134228.1\|VEC70899.1\|4109869_4110820_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
LR134228.1\|VEC70889.1\|4102401_4102797_-\|transcriptional-activator	unknown	unknown	gnl\|CDD\|183154
LR134228.1\|VEC70885.1\|4100811_4101597_+\|carnitinyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|179599
LR134228.1\|VEC70879.1\|4096587_4097730_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566

Protein	Function_ID	Function_description	E-value
LR134228.1\|VEC70887.1\|4101602_4102193_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	1.92413e-141
LR134228.1\|VEC70870.1\|4091222_4091510_-\|ferredoxin-like-protein	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
LR134228.1\|VEC70876.1\|4093799_4094570_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170
LR134228.1\|VEC70905.1\|4111889_4114706_-\|isoleucyl-tRNA-synthetase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
LR134228.1\|VEC70874.1\|4092843_4093785_-\|electron-transfer-flavoprotein-subunit-of-oxidoreductase	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
LR134228.1\|VEC70881.1\|4097858_4099076_+\|crotonobetainyl-CoA:carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
LR134228.1\|VEC70891.1\|4103058_4106280_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
LR134228.1\|VEC70901.1\|4110821_4111271_-\|FkbB-type-16-kD-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
LR134228.1\|VEC70872.1\|4091506_4092793_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
LR134228.1\|VEC70903.1\|4111395_4111890_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	8.43095e-76
LR134228.1\|VEC70897.1\|4108889_4109804_-\|nonspecific-ribonucleoside-hydrolase-(purine/pyrimidine-ribonucleoside-hydrolase)	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
LR134228.1\|VEC70895.1\|4107901_4108723_-\|dihydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	8.28292e-142
LR134228.1\|VEC70893.1\|4106297_4107446_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
LR134228.1\|VEC70883.1\|4099149_4100703_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
LR134228.1\|VEC70907.1\|4114748_4115690_-\|riboflavin-biosynthesis-protein-[includes:-riboflavin-kinase;-FMN-adenylyltransferase]	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.26241e-173
LR134228.1\|VEC70878.1\|4095042_4096557_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
LR134228.1\|VEC70899.1\|4109869_4110820_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
LR134228.1\|VEC70889.1\|4102401_4102797_-\|transcriptional-activator	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
LR134228.1\|VEC70885.1\|4100811_4101597_+\|carnitinyl-CoA-dehydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
LR134228.1\|VEC70879.1\|4096587_4097730_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0

>LR134228.1|VEC70887.1|4101602_4102193_+|carnitine-operon-protein-CaiE
MSYYTFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>LR134228.1|VEC70885.1|4100811_4101597_+|carnitinyl-CoA-dehydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>LR134228.1|VEC70883.1|4099149_4100703_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNCPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>LR134228.1|VEC70881.1|4097858_4099076_+|crotonobetainyl-CoA:carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>LR134228.1|VEC70879.1|4096587_4097730_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>LR134228.1|VEC70878.1|4095042_4096557_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>LR134228.1|VEC70876.1|4093799_4094570_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>LR134228.1|VEC70874.1|4092843_4093785_-|electron-transfer-flavoprotein-subunit-of-oxidoreductase
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>LR134228.1|VEC70872.1|4091506_4092793_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>LR134228.1|VEC70870.1|4091222_4091510_-|ferredoxin-like-protein
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>LR134228.1|VEC70889.1|4102401_4102797_-|transcriptional-activator
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>LR134228.1|VEC70891.1|4103058_4106280_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>LR134228.1|VEC70893.1|4106297_4107446_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>LR134228.1|VEC70895.1|4107901_4108723_-|dihydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
>LR134228.1|VEC70897.1|4108889_4109804_-|nonspecific-ribonucleoside-hydrolase-(purine/pyrimidine-ribonucleoside-hydrolase)
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVLALAS
>LR134228.1|VEC70899.1|4109869_4110820_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>LR134228.1|VEC70901.1|4110821_4111271_-|FkbB-type-16-kD-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>LR134228.1|VEC70903.1|4111395_4111890_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>LR134228.1|VEC70905.1|4111889_4114706_-|isoleucyl-tRNA-synthetase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTRDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>LR134228.1|VEC70907.1|4114748_4115690_-|riboflavin-biosynthesis-protein-[includes:-riboflavin-kinase;-FMN-adenylyltransferase]
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MH051334	Escherichia phage vB_EcoS-Ro145c2YLVW, complete genome	20898-20929	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	GU196281	Escherichia phage K1ind3, complete genome	15055-15086	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MF153391	Escherichia phage ST2, complete genome	28759-28790	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MG852086	Escherichia phage vB_EcoS-Ro145clw, complete genome	39072-39103	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	NC_041898	Escherichia phage K1ind2, complete genome	14359-14390	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	KY295898	Escherichia phage P AB-2017, complete genome	11815-11846	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	GU196279	Escherichia phage K1ind1, complete genome	14358-14389	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MK737937	Raoultella phage RP180, complete genome	16538-16569	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MK542015	Escherichia phage ZCEC5, complete genome	17484-17515	1	0.969
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MT711528	Escherichia phage vB_EcoS_fTaEco03, complete genome	13641-13672	1	0.969
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MT711525	Escherichia phage vB_EcoS_fKuEco01, complete genome	13203-13234	1	0.969
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	NC_027993	Escherichia phage K1G, complete genome	15304-15335	1	0.969
LR134228_1	1.1\|1085623\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085623-1085654	32	MT711527	Escherichia phage vB_EcoS_fTaEco01, complete genome	13202-13233	1	0.969
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11833-11866	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36518-36551	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9504-9537	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65532-65565	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64163-64196	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119282-119315	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85097-85130	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42114-42147	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87235-87268	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70498-70531	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62995-63028	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	MH422554	Escherichia phage P1, complete genome	87192-87225	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NC_050152	Enterobacteria phage P7, complete genome	93993-94026	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58643-58676	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	MH445381	Escherichia virus P1, complete genome	56868-56901	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42180	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1590	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94789	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61949	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20319	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46721	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81886	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47894	1	0.971
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NC_031129	Salmonella phage SJ46, complete genome	77363-77396	1	0.971
LR134228_5	5.1\|3033667\|40\|LR134228\|CRISPRCasFinder	3033667-3033706	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	71166-71197	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	71579-71610	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	57771-57802	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	49237-49268	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	80644-80675	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	43940-43971	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	30387-30418	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_MH257954	Escherichia coli strain 104 plasmid pHXH-2, complete sequence	71853-71884	2	0.938
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	CP053388	Escherichia phage CMS-2020a, complete sequence	69160-69191	2	0.938
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
LR134228_2	2.15\|1113808\|32\|LR134228\|CRISPRCasFinder,CRT	1113808-1113839	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
LR134228_4	4.1\|2266006\|38\|LR134228\|CRISPRCasFinder	2266006-2266043	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
LR134228_1	1.14\|1086416\|32\|LR134228\|CRISPRCasFinder,CRT	1086416-1086447	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
LR134228_1	1.14\|1086416\|32\|LR134228\|CRISPRCasFinder,CRT	1086416-1086447	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
LR134228_1	1.14\|1086416\|32\|LR134228\|CRISPRCasFinder,CRT	1086416-1086447	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	57769-57802	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	49235-49268	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	30385-30418	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	71166-71199	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	71579-71612	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	80644-80677	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	43940-43973	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	NZ_MH257954	Escherichia coli strain 104 plasmid pHXH-2, complete sequence	71853-71886	3	0.912
LR134228_2	2.29\|1113747\|34\|LR134228\|PILER-CR	1113747-1113780	34	CP053388	Escherichia phage CMS-2020a, complete sequence	69160-69193	3	0.912
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17438-17471	3	0.912
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122308-122341	3	0.912
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6027-6060	3	0.912
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131400-131433	3	0.912
LR134228_2	2.30\|1113808\|34\|LR134228\|PILER-CR	1113808-1113841	34	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15154	3	0.912
LR134228_1	1.25\|1086415\|33\|LR134228\|PILER-CR	1086415-1086447	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
LR134228_1	1.25\|1086415\|33\|LR134228\|PILER-CR	1086415-1086447	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
LR134228_1	1.25\|1086415\|33\|LR134228\|PILER-CR	1086415-1086447	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
LR134228_1	1.8\|1086050\|32\|LR134228\|CRISPRCasFinder,CRT	1086050-1086081	32	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	118383-118414	5	0.844
LR134228_1	1.8\|1086050\|32\|LR134228\|CRISPRCasFinder,CRT	1086050-1086081	32	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	118389-118420	5	0.844
LR134228_1	1.8\|1086050\|32\|LR134228\|CRISPRCasFinder,CRT	1086050-1086081	32	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	118373-118404	5	0.844
LR134228_1	1.14\|1086416\|32\|LR134228\|CRISPRCasFinder,CRT	1086416-1086447	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
LR134228_2	2.10\|1113503\|32\|LR134228\|CRISPRCasFinder,CRT	1113503-1113534	32	NZ_CP011408	Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence	35508-35539	5	0.844
LR134228_1	1.19\|1086049\|33\|LR134228\|PILER-CR	1086049-1086081	33	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	118383-118415	6	0.818
LR134228_1	1.19\|1086049\|33\|LR134228\|PILER-CR	1086049-1086081	33	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	118389-118421	6	0.818
LR134228_1	1.19\|1086049\|33\|LR134228\|PILER-CR	1086049-1086081	33	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	118373-118405	6	0.818
LR134228_1	1.25\|1086415\|33\|LR134228\|PILER-CR	1086415-1086447	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
LR134228_2	2.6\|1113259\|32\|LR134228\|CRISPRCasFinder,CRT	1113259-1113290	32	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	372876-372907	6	0.812
LR134228_2	2.6\|1113259\|32\|LR134228\|CRISPRCasFinder,CRT	1113259-1113290	32	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	95815-95846	6	0.812
LR134228_2	2.6\|1113259\|32\|LR134228\|CRISPRCasFinder,CRT	1113259-1113290	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	1048558-1048589	6	0.812
LR134228_2	2.10\|1113503\|32\|LR134228\|CRISPRCasFinder,CRT	1113503-1113534	32	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	31692-31723	6	0.812
LR134228_2	2.21\|1113259\|34\|LR134228\|PILER-CR	1113259-1113292	34	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	1048558-1048591	6	0.824
LR134228_2	2.25\|1113503\|34\|LR134228\|PILER-CR	1113503-1113536	34	NZ_CP011408	Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence	35508-35541	6	0.824
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	MT657335	Gordonia phage Mariokart, complete genome	45683-45714	7	0.781
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	NZ_CP026306	Streptomyces lunaelactis strain MM109 plasmid pSLUN2, complete sequence	41845-41876	7	0.781
LR134228_1	1.15\|1086477\|32\|LR134228\|CRISPRCasFinder,CRT	1086477-1086508	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	327961-327992	7	0.781
LR134228_2	2.11\|1113564\|32\|LR134228\|CRISPRCasFinder,CRT	1113564-1113595	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	897526-897557	7	0.781
LR134228_2	2.11\|1113564\|32\|LR134228\|CRISPRCasFinder,CRT	1113564-1113595	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	585720-585751	7	0.781
LR134228_2	2.11\|1113564\|32\|LR134228\|CRISPRCasFinder,CRT	1113564-1113595	32	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	89866-89897	7	0.781
LR134228_2	2.11\|1113564\|32\|LR134228\|CRISPRCasFinder,CRT	1113564-1113595	32	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	97239-97270	7	0.781
LR134228_2	2.11\|1113564\|32\|LR134228\|CRISPRCasFinder,CRT	1113564-1113595	32	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	75914-75945	7	0.781
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	119228-119259	8	0.75
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	NC_023068	Streptomyces sp. F11 plasmid pFP12, complete sequence	22193-22224	8	0.75
LR134228_1	1.4\|1085806\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085806-1085837	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	2136206-2136237	8	0.75
LR134228_1	1.5\|1085867\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085867-1085898	32	NC_041912	Aquamicrobium phage P14, complete genome	25099-25130	8	0.75
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	803827-803858	8	0.75
LR134228_1	1.10\|1086172\|32\|LR134228\|CRISPRCasFinder,CRT	1086172-1086203	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	965187-965218	8	0.75
LR134228_1	1.15\|1086477\|32\|LR134228\|CRISPRCasFinder,CRT	1086477-1086508	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
LR134228_1	1.18\|1086660\|32\|LR134228\|CRISPRCasFinder,CRT	1086660-1086691	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
LR134228_1	1.26\|1086476\|33\|LR134228\|PILER-CR	1086476-1086508	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	KR131710	Fusobacterium phage Funu1, complete genome	14307-14338	8	0.75
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	330817-330848	8	0.75
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	NZ_CP019876	Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence	50232-50263	8	0.75
LR134228_2	2.6\|1113259\|32\|LR134228\|CRISPRCasFinder,CRT	1113259-1113290	32	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1589634-1589665	8	0.75
LR134228_2	2.11\|1113564\|32\|LR134228\|CRISPRCasFinder,CRT	1113564-1113595	32	NZ_CP011054	Halomonas sp. KO116 plasmid unnamed2, complete sequence	177867-177898	8	0.75
LR134228_2	2.12\|1113625\|32\|LR134228\|CRISPRCasFinder,CRT	1113625-1113656	32	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	34220-34251	8	0.75
LR134228_2	2.12\|1113625\|32\|LR134228\|CRISPRCasFinder,CRT	1113625-1113656	32	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	13805-13836	8	0.75
LR134228_2	2.19\|1113137\|34\|LR134228\|PILER-CR	1113137-1113170	34	KR131710	Fusobacterium phage Funu1, complete genome	14305-14338	8	0.765
LR134228_2	2.21\|1113259\|34\|LR134228\|PILER-CR	1113259-1113292	34	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	95815-95848	8	0.765
LR134228_2	2.25\|1113503\|34\|LR134228\|PILER-CR	1113503-1113536	34	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	31692-31725	8	0.765
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	750783-750814	9	0.719
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	204826-204857	9	0.719
LR134228_1	1.3\|1085745\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085745-1085776	32	NZ_CP033429	Burkholderia gladioli strain Burkholderia gladioli Co14 plasmid p1, complete sequence	138614-138645	9	0.719
LR134228_1	1.5\|1085867\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085867-1085898	32	NZ_CP011506	Burkholderia pyrrocinia strain DSM 10685 plasmid p2327, complete sequence	33839-33870	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	202131-202162	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	201891-201922	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1437214-1437245	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	447089-447120	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	819843-819874	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	201074-201105	9	0.719
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_LR594663	Variovorax sp. RA8 plasmid 2	262948-262979	9	0.719
LR134228_1	1.11\|1086233\|32\|LR134228\|CRISPRCasFinder,CRT	1086233-1086264	32	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	433713-433744	9	0.719
LR134228_1	1.13\|1086355\|32\|LR134228\|CRISPRCasFinder,CRT	1086355-1086386	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
LR134228_2	2.3\|1113076\|32\|LR134228\|CRISPRCasFinder,CRT	1113076-1113107	32	NC_008574	Ralstonia phage RSM1, complete genome	8818-8849	9	0.719
LR134228_2	2.3\|1113076\|32\|LR134228\|CRISPRCasFinder,CRT	1113076-1113107	32	AB981170	Ralstonia phage RSMSuper DNA, complete genome	8770-8801	9	0.719
LR134228_2	2.3\|1113076\|32\|LR134228\|CRISPRCasFinder,CRT	1113076-1113107	32	AB259123	Ralstonia phage RSM1 DNA, complete genome	8818-8849	9	0.719
LR134228_2	2.3\|1113076\|32\|LR134228\|CRISPRCasFinder,CRT	1113076-1113107	32	NC_011399	Ralstonia phage RSM3, complete genome	8743-8774	9	0.719
LR134228_2	2.3\|1113076\|32\|LR134228\|CRISPRCasFinder,CRT	1113076-1113107	32	AB434711	Ralstonia phage RSM3 DNA, complete genome	8743-8774	9	0.719
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	NC_019126	Salmonella enterica subsp. indica plasmid pSARC14-41, complete sequence	5352-5383	9	0.719
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	CP053407	Salmonella enterica strain 87-0091 plasmid unnamed, complete sequence	77533-77564	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP053710	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence	42973-43004	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP013524	Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence	134787-134818	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP013576	Rhizobium phaseoli strain N671 plasmid pRphaN671b, complete sequence	146534-146565	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP013548	Rhizobium phaseoli strain R611 plasmid pRetR611a, complete sequence	146532-146563	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP013533	Rhizobium phaseoli strain R650 plasmid pRphaR650a, complete sequence	146532-146563	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP013543	Rhizobium phaseoli strain R620 plasmid pRphaR620a, complete sequence	149944-149975	9	0.719
LR134228_2	2.5\|1113198\|32\|LR134228\|CRISPRCasFinder,CRT	1113198-1113229	32	NZ_CP013570	Rhizobium phaseoli strain N771 plasmid pRphaN771b, complete sequence	146534-146565	9	0.719
LR134228_2	2.6\|1113259\|32\|LR134228\|CRISPRCasFinder,CRT	1113259-1113290	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	790344-790375	9	0.719
LR134228_2	2.8\|1113381\|32\|LR134228\|CRISPRCasFinder,CRT	1113381-1113412	32	NZ_CP039694	Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence	201988-202019	9	0.719
LR134228_2	2.8\|1113381\|32\|LR134228\|CRISPRCasFinder,CRT	1113381-1113412	32	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	375367-375398	9	0.719
LR134228_2	2.12\|1113625\|32\|LR134228\|CRISPRCasFinder,CRT	1113625-1113656	32	MT028491	Ochrobactrum phage vB_OspM_OC, complete genome	50790-50821	9	0.719
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	NZ_CP011009	Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence	147371-147402	9	0.719
LR134228_2	2.14\|1113747\|32\|LR134228\|CRISPRCasFinder,CRT	1113747-1113778	32	MN693961	Marine virus AFVG_250M531, complete genome	39943-39974	9	0.719
LR134228_2	2.18\|1113076\|34\|LR134228\|PILER-CR	1113076-1113109	34	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	438517-438550	9	0.735
LR134228_2	2.26\|1113564\|34\|LR134228\|PILER-CR	1113564-1113597	34	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	897526-897559	9	0.735
LR134228_2	2.26\|1113564\|34\|LR134228\|PILER-CR	1113564-1113597	34	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	585718-585751	9	0.735
LR134228_2	2.26\|1113564\|34\|LR134228\|PILER-CR	1113564-1113597	34	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	89864-89897	9	0.735
LR134228_2	2.26\|1113564\|34\|LR134228\|PILER-CR	1113564-1113597	34	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	97237-97270	9	0.735
LR134228_2	2.26\|1113564\|34\|LR134228\|PILER-CR	1113564-1113597	34	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	75912-75945	9	0.735
LR134228_2	2.27\|1113625\|34\|LR134228\|PILER-CR	1113625-1113658	34	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	34220-34253	9	0.735
LR134228_2	2.27\|1113625\|34\|LR134228\|PILER-CR	1113625-1113658	34	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	13803-13836	9	0.735
LR134228_6	6.3\|3175612\|33\|LR134228\|CRISPRCasFinder,CRT	3175612-3175644	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
LR134228_6	6.5\|3175613\|32\|LR134228\|PILER-CR	3175613-3175644	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
LR134228_1	1.5\|1085867\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085867-1085898	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	398736-398767	10	0.688
LR134228_1	1.5\|1085867\|32\|LR134228\|PILER-CR,CRISPRCasFinder,CRT	1085867-1085898	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2728156-2728187	10	0.688
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	450330-450361	10	0.688
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	450338-450369	10	0.688
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	324906-324937	10	0.688
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	203477-203508	10	0.688
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP016618	Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence	555568-555599	10	0.688
LR134228_1	1.11\|1086233\|32\|LR134228\|CRISPRCasFinder,CRT	1086233-1086264	32	NZ_CP013423	Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence	53365-53396	10	0.688
LR134228_1	1.11\|1086233\|32\|LR134228\|CRISPRCasFinder,CRT	1086233-1086264	32	NZ_CP019317	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-5, complete sequence	34609-34640	10	0.688
LR134228_1	1.14\|1086416\|32\|LR134228\|CRISPRCasFinder,CRT	1086416-1086447	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
LR134228_1	1.14\|1086416\|32\|LR134228\|CRISPRCasFinder,CRT	1086416-1086447	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
LR134228_2	2.12\|1113625\|32\|LR134228\|CRISPRCasFinder,CRT	1113625-1113656	32	NZ_CP020079	Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence	149847-149878	10	0.688
LR134228_2	2.12\|1113625\|32\|LR134228\|CRISPRCasFinder,CRT	1113625-1113656	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	225034-225065	10	0.688
LR134228_2	2.12\|1113625\|32\|LR134228\|CRISPRCasFinder,CRT	1113625-1113656	32	NZ_CP019295	Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence	148571-148602	10	0.688
LR134228_2	2.20\|1113198\|34\|LR134228\|PILER-CR	1113198-1113231	34	NZ_CP053710	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence	42971-43004	10	0.706
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
LR134228_9	9.1\|4102283\|38\|LR134228\|CRISPRCasFinder	4102283-4102320	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	948481-948512	11	0.656
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	132274-132305	11	0.656
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	376878-376909	11	0.656
LR134228_1	1.25\|1086415\|33\|LR134228\|PILER-CR	1086415-1086447	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
LR134228_1	1.25\|1086415\|33\|LR134228\|PILER-CR	1086415-1086447	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	MN695335	Synechococcus phage B23, complete genome	57764-57795	11	0.656
LR134228_2	2.4\|1113137\|32\|LR134228\|CRISPRCasFinder,CRT	1113137-1113168	32	MN695334	Synechococcus phage B3, complete genome	57761-57792	11	0.656
LR134228_2	2.6\|1113259\|32\|LR134228\|CRISPRCasFinder,CRT	1113259-1113290	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	36393-36424	11	0.656
LR134228_2	2.9\|1113442\|32\|LR134228\|CRISPRCasFinder,CRT	1113442-1113473	32	NZ_AP014810	Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence	3573-3604	11	0.656
LR134228_2	2.9\|1113442\|32\|LR134228\|CRISPRCasFinder,CRT	1113442-1113473	32	NC_010727	Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence	1795-1826	11	0.656
LR134228_1	1.7\|1085989\|32\|LR134228\|CRISPRCasFinder,CRT	1085989-1086020	32	NC_009717	Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence	151129-151160	14	0.562

1. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MH051334 (Escherichia phage vB_EcoS-Ro145c2YLVW, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

2. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to GU196281 (Escherichia phage K1ind3, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

3. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MF153391 (Escherichia phage ST2, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

4. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MG852086 (Escherichia phage vB_EcoS-Ro145clw, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

5. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NC_041898 (Escherichia phage K1ind2, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

6. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to KY295898 (Escherichia phage P AB-2017, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

7. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to GU196279 (Escherichia phage K1ind1, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

8. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MK737937 (Raoultella phage RP180, complete genome) position: , mismatch: 0, identity: 1.0

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctacgag	Protospacer
********************************

9. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

26. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

27. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

28. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

29. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

30. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

31. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

32. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

33. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MK542015 (Escherichia phage ZCEC5, complete genome) position: , mismatch: 1, identity: 0.969

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgcctcctacgag	Protospacer
*********************** ********

34. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MT711528 (Escherichia phage vB_EcoS_fTaEco03, complete genome) position: , mismatch: 1, identity: 0.969

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctatgag	Protospacer
****************************.***

35. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MT711525 (Escherichia phage vB_EcoS_fKuEco01, complete genome) position: , mismatch: 1, identity: 0.969

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctatgag	Protospacer
****************************.***

36. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NC_027993 (Escherichia phage K1G, complete genome) position: , mismatch: 1, identity: 0.969

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctatgag	Protospacer
****************************.***

37. spacer 1.1|1085623|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MT711527 (Escherichia phage vB_EcoS_fTaEco01, complete genome) position: , mismatch: 1, identity: 0.969

tagacgcgctgtacaggttcgccacctacgag	CRISPR spacer
tagacgcgctgtacaggttcgccacctatgag	Protospacer
****************************.***

38. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

39. spacer 2.30|1113808|34|LR134228|PILER-CR matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

40. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

41. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

42. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

43. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

44. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

45. spacer 2.30|1113808|34|LR134228|PILER-CR matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

46. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

47. spacer 2.30|1113808|34|LR134228|PILER-CR matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

48. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

49. spacer 2.30|1113808|34|LR134228|PILER-CR matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

50. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

51. spacer 2.30|1113808|34|LR134228|PILER-CR matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

52. spacer 2.30|1113808|34|LR134228|PILER-CR matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

53. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

54. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

55. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

56. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

57. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

58. spacer 2.30|1113808|34|LR134228|PILER-CR matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

59. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

60. spacer 2.30|1113808|34|LR134228|PILER-CR matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

61. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

62. spacer 5.1|3033667|40|LR134228|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcattcttgaaattccccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
************************ ***************

63. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

64. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

65. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

66. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

67. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

68. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

69. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

70. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

71. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

72. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

73. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

74. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

75. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

76. spacer 2.15|1113808|32|LR134228|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

77. spacer 4.1|2266006|38|LR134228|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

78. spacer 1.14|1086416|32|LR134228|CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

79. spacer 1.14|1086416|32|LR134228|CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

80. spacer 1.14|1086416|32|LR134228|CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

81. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

82. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

83. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

84. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

85. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

86. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

87. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

88. spacer 2.29|1113747|34|LR134228|PILER-CR matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

89. spacer 2.29|1113747|34|LR134228|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

90. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

91. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

92. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

93. spacer 2.30|1113808|34|LR134228|PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgttt	Protospacer
************ * ***************** *

94. spacer 2.30|1113808|34|LR134228|PILER-CR matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

95. spacer 1.25|1086415|33|LR134228|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

96. spacer 1.25|1086415|33|LR134228|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

97. spacer 1.25|1086415|33|LR134228|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

98. spacer 1.8|1086050|32|LR134228|CRISPRCasFinder,CRT matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

99. spacer 1.8|1086050|32|LR134228|CRISPRCasFinder,CRT matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

100. spacer 1.8|1086050|32|LR134228|CRISPRCasFinder,CRT matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

101. spacer 1.14|1086416|32|LR134228|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

102. spacer 2.10|1113503|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 5, identity: 0.844

agattggttttccagtctttggcggttggcaa	CRISPR spacer
agattggttttccagtctttcgcggtcggagt	Protospacer
******************** *****.** .

103. spacer 1.19|1086049|33|LR134228|PILER-CR matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 6, identity: 0.818

gttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
aatttgtgatacagtaaacgtttgagtatctgc	Protospacer
. ******** ****** *********** *.*

104. spacer 1.19|1086049|33|LR134228|PILER-CR matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 6, identity: 0.818

gttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
aatttgtgatacagtaaacgtttgagtatctgc	Protospacer
. ******** ****** *********** *.*

105. spacer 1.19|1086049|33|LR134228|PILER-CR matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 6, identity: 0.818

gttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
aatttgtgatacagtaaacgtttgagtatctgc	Protospacer
. ******** ****** *********** *.*

106. spacer 1.25|1086415|33|LR134228|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

107. spacer 2.6|1113259|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 6, identity: 0.812

gttggtggggtgagcagttcgccgacgacccg	CRISPR spacer
gtggccggggtgcgcagttcgccgacgacgag	Protospacer
** * .****** ****************  *

108. spacer 2.6|1113259|32|LR134228|CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 6, identity: 0.812

gttggtggggtgagcagttcgccgacgacccg	CRISPR spacer
gtcgcaggggtgcgcagttcaccgacgaccag	Protospacer
**.*  ****** *******.********* *

109. spacer 2.6|1113259|32|LR134228|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.812

gttggtg-gggtgagcagttcgccgacgacccg	CRISPR spacer
-ctagtgctggtgatcagttcgccgccgacccg	Protospacer
 .*.***  ***** ********** *******

110. spacer 2.10|1113503|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agattggttttccagtctttggcggttggcaa	CRISPR spacer
aagttggttttccagtctttggcggtcgggtt	Protospacer
*..***********************.**

111. spacer 2.21|1113259|34|LR134228|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.824

gttggtg-gggtgagcagttcgccgacgacccgga	CRISPR spacer
-ctagtgctggtgatcagttcgccgccgacccgga	Protospacer
 .*.***  ***** ********** *********

112. spacer 2.25|1113503|34|LR134228|PILER-CR matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 6, identity: 0.824

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
agattggttttccagtctttcgcggtcggagtga	Protospacer
******************** *****.** . *

113. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

114. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

115. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

116. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

117. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

118. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

119. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to MT657335 (Gordonia phage Mariokart, complete genome) position: , mismatch: 7, identity: 0.781

catgagccaggacgacgcccggtccgagggcg	CRISPR spacer
cgaccgcgaggacgacgcccgggccgagggcc	Protospacer
*.   ** ************** ********

120. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026306 (Streptomyces lunaelactis strain MM109 plasmid pSLUN2, complete sequence) position: , mismatch: 7, identity: 0.781

catgagcc---aggacgacgcccggtccgagggcg	CRISPR spacer
---gggcctttcgggcgacggccggtccgagggcg	Protospacer
   *.***    **.***** **************

121. spacer 1.15|1086477|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

122. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 7, identity: 0.781

aaattattttttgggtgttaaaaaccagattc---	CRISPR spacer
acatttctttttgggtgttaaaaac---atttcca	Protospacer
* *** .******************   ***.

123. spacer 2.11|1113564|32|LR134228|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ttacgccggtatcccgctccctgttcagccga	Protospacer
.*..******* *** **************

124. spacer 2.11|1113564|32|LR134228|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

125. spacer 2.11|1113564|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

126. spacer 2.11|1113564|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

127. spacer 2.11|1113564|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

128. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

catgagccaggacgacgcccggtccgagggcg	CRISPR spacer
cgacgggcaggacgacgccctggccgagggca	Protospacer
*.  .* ************* * ********.

129. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NC_023068 (Streptomyces sp. F11 plasmid pFP12, complete sequence) position: , mismatch: 8, identity: 0.75

---catgagccaggacgacgcccggtccgagggcg	CRISPR spacer
gcccgcg---cacgtcgacgcccggtccgaggggg	Protospacer
   *..*   ** * ****************** *

130. spacer 1.4|1085806|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.75

tcgctggcggggaccgatcatatctgtcaatc	CRISPR spacer
aatgtggcggggagcgatcaaatctgtctctc	Protospacer
    ********* ****** *******  **

131. spacer 1.5|1085867|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NC_041912 (Aquamicrobium phage P14, complete genome) position: , mismatch: 8, identity: 0.75

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
tcatcatgattcccgaggacgtgctgtccctg	Protospacer
  *********** ** ********* * * .

132. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

--agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
cgagtga--tggaggcgctcgcgcacctcgtcga	Protospacer
  ***..  ***************.**** **..

133. spacer 1.10|1086172|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgctgacgcggtaaaaagcggggcgtgattcg	CRISPR spacer
gactgacgcggtaaaaggcggagcgggcattg	Protospacer
 .**************.****.*** *  *.*

134. spacer 1.15|1086477|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

135. spacer 1.18|1086660|32|LR134228|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

136. spacer 1.26|1086476|33|LR134228|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

137. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 8, identity: 0.75

aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
aaattattttttgagtgttaaaaatggcttgt	Protospacer
*************.**********. .  * .

138. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 8, identity: 0.75

aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
taattatttcttgggtgttgaaaaataccgtc	Protospacer
 ********.*********.**** .*   **

139. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP019876 (Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence) position: , mismatch: 8, identity: 0.75

--aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
ttcaagtgttttc--gttgttaaaaaccagattg	Protospacer
   ** *.****.  * ****************

140. spacer 2.6|1113259|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.75

gttggtggggtgagcagttcgccgacgacccg	CRISPR spacer
gcggcgggggtgagcagggcgccgacgacgag	Protospacer
*. *  ***********  **********  *

141. spacer 2.11|1113564|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP011054 (Halomonas sp. KO116 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtgc---cggtagccccctccctgttcagcctc	CRISPR spacer
---tgcgagcggtaacccccaccctgttcagctct	Protospacer
   ***   *****.***** ***********...

142. spacer 2.12|1113625|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *

143. spacer 2.12|1113625|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *

144. spacer 2.19|1113137|34|LR134228|PILER-CR matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 8, identity: 0.765

aaattattttttgggtgttaaaaaccagattcga--	CRISPR spacer
aaattattttttgagtgttaaaaat--ggcttgttt	Protospacer
*************.**********.  *..*.*

145. spacer 2.21|1113259|34|LR134228|PILER-CR matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 8, identity: 0.765

gttggtggggtgagcagttcgccgacgacccgga	CRISPR spacer
gtcgcaggggtgcgcagttcaccgacgaccagtt	Protospacer
**.*  ****** *******.********* *

146. spacer 2.25|1113503|34|LR134228|PILER-CR matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
aagttggttttccagtctttggcggtcgggttaa	Protospacer
*..***********************.**   .

147. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

148. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

149. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

150. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

151. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 9, identity: 0.719

catgagccaggacgacgcccggtccgagggcg	CRISPR spacer
ggaggtgctggacatcgcccggtccgagggcg	Protospacer
 . *.  * ****. *****************

152. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.719

catgagccaggacgacgcccggtccgagggcg	CRISPR spacer
ggaggtgctggacatcgcccggtccgagggcg	Protospacer
 . *.  * ****. *****************

153. spacer 1.3|1085745|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033429 (Burkholderia gladioli strain Burkholderia gladioli Co14 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

catgagccaggacgacgcccggtccgagggcg	CRISPR spacer
ccaggaccaggacgacgcccgctgcgaggtaa	Protospacer
*  *..*************** * *****  .

154. spacer 1.5|1085867|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011506 (Burkholderia pyrrocinia strain DSM 10685 plasmid p2327, complete sequence) position: , mismatch: 9, identity: 0.719

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
ctgtccggattccggacgttgtgctggcgccg	Protospacer
  .**  *********** .********** .

155. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcgccttggagccgcttgcgcgcctcttcaa	Protospacer
. .. *.***** ****.*************.

156. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcgccttggagccgcttgcgcgcctcttcaa	Protospacer
. .. *.***** ****.*************.

157. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcgccttggagccgcttgcgcgcctcttcaa	Protospacer
. .. *.***** ****.*************.

158. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcgccttggagccgcttgcgcgcctcttcaa	Protospacer
. .. *.***** ****.*************.

159. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcgccttggagccgcttgcgcgcctcttcaa	Protospacer
. .. *.***** ****.*************.

160. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcgccttggagccgcttgcgcgcctcttcaa	Protospacer
. .. *.***** ****.*************.

161. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 9, identity: 0.719

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
aagggccgggaggcgctcgcgcgcgtcggcct	Protospacer
*. .*** **************** **  *

162. spacer 1.11|1086233|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 9, identity: 0.719

agtgccagcgccgcgcacgcctgatcatatgt	CRISPR spacer
tgcggtgacggcgcgcacgcctgatcagatgc	Protospacer
 *.* ...** **************** ***.

163. spacer 1.13|1086355|32|LR134228|CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
gaaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
* ********  *************..*  .

164. spacer 2.3|1113076|32|LR134228|CRISPRCasFinder,CRT matches to NC_008574 (Ralstonia phage RSM1, complete genome) position: , mismatch: 9, identity: 0.719

gcggggatttgttggcgaaacaggtcggcgtc	CRISPR spacer
gtgactattgggtggcgaaacaggtcggctca	Protospacer
*.*.  *** * ***************** .

165. spacer 2.3|1113076|32|LR134228|CRISPRCasFinder,CRT matches to AB981170 (Ralstonia phage RSMSuper DNA, complete genome) position: , mismatch: 9, identity: 0.719

gcggggatttgttggcgaaacaggtcggcgtc	CRISPR spacer
gtgactattgggtggcgaaacaggtcggctca	Protospacer
*.*.  *** * ***************** .

166. spacer 2.3|1113076|32|LR134228|CRISPRCasFinder,CRT matches to AB259123 (Ralstonia phage RSM1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gcggggatttgttggcgaaacaggtcggcgtc	CRISPR spacer
gtgactattgggtggcgaaacaggtcggctca	Protospacer
*.*.  *** * ***************** .

167. spacer 2.3|1113076|32|LR134228|CRISPRCasFinder,CRT matches to NC_011399 (Ralstonia phage RSM3, complete genome) position: , mismatch: 9, identity: 0.719

gcggggatttgttggcgaaacaggtcggcgtc	CRISPR spacer
gtgactattgggtggcgaaacaggtcggctca	Protospacer
*.*.  *** * ***************** .

168. spacer 2.3|1113076|32|LR134228|CRISPRCasFinder,CRT matches to AB434711 (Ralstonia phage RSM3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gcggggatttgttggcgaaacaggtcggcgtc	CRISPR spacer
gtgactattgggtggcgaaacaggtcggctca	Protospacer
*.*.  *** * ***************** .

169. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to NC_019126 (Salmonella enterica subsp. indica plasmid pSARC14-41, complete sequence) position: , mismatch: 9, identity: 0.719

aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
taattattttttaggagttaaaaatgaaaaaa	Protospacer
 ***********.** ********. *.*

170. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to CP053407 (Salmonella enterica strain 87-0091 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
taattattttttaggagttaaaaatgaaaaaa	Protospacer
 ***********.** ********. *.*

171. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
ccctcgatccccatgcccaatcgcttcatgag	Protospacer
*********.* ************ . ..*

172. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013524 (Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
tcctcggcctcgatgcccaatcgcgcctcacg	Protospacer
.*****..****************.*  *..

173. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013576 (Rhizobium phaseoli strain N671 plasmid pRphaN671b, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
tcctcggcctcgatgcccaatcgcgcctcacg	Protospacer
.*****..****************.*  *..

174. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013548 (Rhizobium phaseoli strain R611 plasmid pRetR611a, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
tcctcggcctcgatgcccaatcgcgcctcacg	Protospacer
.*****..****************.*  *..

175. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013533 (Rhizobium phaseoli strain R650 plasmid pRphaR650a, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
tcctcggcctcgatgcccaatcgcgcctcacg	Protospacer
.*****..****************.*  *..

176. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013543 (Rhizobium phaseoli strain R620 plasmid pRphaR620a, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
tcctcggcctcgatgcccaatcgcgcctcacg	Protospacer
.*****..****************.*  *..

177. spacer 2.5|1113198|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013570 (Rhizobium phaseoli strain N771 plasmid pRphaN771b, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgatctcgatgcccaatcgcacagcgtc	CRISPR spacer
tcctcggcctcgatgcccaatcgcgcctcacg	Protospacer
.*****..****************.*  *..

178. spacer 2.6|1113259|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gttggtggggtgagcagttcgccgacgacccg	CRISPR spacer
ttggccggggtgagcagttcgtcgtcgacgac	Protospacer
 * * .***************.** ****

179. spacer 2.8|1113381|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP039694 (Agrobacterium larrymoorei strain CFBP5473 plasmid pTiCFBP5473, complete sequence) position: , mismatch: 9, identity: 0.719

gatttattctaaacaatgtccacattgtgacc	CRISPR spacer
aattttttctaaacattgtccacaatttacgt	Protospacer
.**** ********* ******** * *.  .

180. spacer 2.8|1113381|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gatttattctaaacaatgtccacattgtgacc	CRISPR spacer
ggtttattctacacaatgtcaacatagatgtt	Protospacer
*.********* ******** **** *  ...

181. spacer 2.12|1113625|32|LR134228|CRISPRCasFinder,CRT matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 9, identity: 0.719

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tcgtttagagtggtgtattcaaaatctttgac	Protospacer
*  *******  **************    *

182. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP011009 (Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence) position: , mismatch: 9, identity: 0.719

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
ttatctttaattattgagatgatgctccgcat	Protospacer
 * ************ ** *******..  *

183. spacer 2.14|1113747|32|LR134228|CRISPRCasFinder,CRT matches to MN693961 (Marine virus AFVG_250M531, complete genome) position: , mismatch: 9, identity: 0.719

atttcttt-----aattatttagctgatgcttttaaa	CRISPR spacer
-----tatgaaagaattatttagctgatgcagttaag	Protospacer
     * *     *****************  ****.

184. spacer 2.18|1113076|34|LR134228|PILER-CR matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 9, identity: 0.735

gcggggatttgttggcgaaacaggtcggcgtcga	CRISPR spacer
attcggggtcgttggcgaaccagatcggcgtcga	Protospacer
..  **. *.********* ***.**********

185. spacer 2.26|1113564|34|LR134228|PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ttacgccggtatcccgctccctgttcagccgacc	Protospacer
.*..******* *** **************   .

186. spacer 2.26|1113564|34|LR134228|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

187. spacer 2.26|1113564|34|LR134228|PILER-CR matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

188. spacer 2.26|1113564|34|LR134228|PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

189. spacer 2.26|1113564|34|LR134228|PILER-CR matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

190. spacer 2.27|1113625|34|LR134228|PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

191. spacer 2.27|1113625|34|LR134228|PILER-CR matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

192. spacer 6.3|3175612|33|LR134228|CRISPRCasFinder,CRT matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

193. spacer 6.5|3175613|32|LR134228|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

194. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

195. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

196. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

197. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

198. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

199. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

200. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

201. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

202. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

203. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

204. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

205. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

206. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

207. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

208. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

209. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

210. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

211. spacer 1.5|1085867|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
gcgaggacattccggccgccgtgctggcgcgc	Protospacer
* .  .  ******* ** ************

212. spacer 1.5|1085867|32|LR134228|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
gggcgatgattccggccgaggtgctggccatc	Protospacer
*... ********** *** ********

213. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 10, identity: 0.688

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcggcctggaggcgatggcgcgcctcggcct	Protospacer
. ..*********** * *********  *

214. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 10, identity: 0.688

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcggcctggaggcgatggcgcgcctcggcct	Protospacer
. ..*********** * *********  *

215. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 10, identity: 0.688

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
ctcggcctggatgcgctcgcgctcctcctggc	Protospacer
  ..******* ********** ****.* .

216. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 10, identity: 0.688

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gtcggcctggaggcgatggcgcgcctcggcct	Protospacer
. ..*********** * *********  *

217. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP016618 (Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
cttggcccggaggcgctcgcgggcctcgatgc	Protospacer
  *.***.************* *****  ..

218. spacer 1.11|1086233|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013423 (Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence) position: , mismatch: 10, identity: 0.688

agtgccagcgccgcgcacgcctgatcatatgt	CRISPR spacer
ttcgccagcgtcgcgaacgcctgatcggggat	Protospacer
  .*******.**** **********. . .*

219. spacer 1.11|1086233|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP019317 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-5, complete sequence) position: , mismatch: 10, identity: 0.688

agtgccagcgccgcgcacgcctgatcatatgt	CRISPR spacer
tgcgcccgcgccgcgcgcgcctgatcggggcg	Protospacer
 *.*** *********.*********. .

220. spacer 1.14|1086416|32|LR134228|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

221. spacer 1.14|1086416|32|LR134228|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

222. spacer 2.12|1113625|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

223. spacer 2.12|1113625|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

224. spacer 2.12|1113625|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP019295 (Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

225. spacer 2.20|1113198|34|LR134228|PILER-CR matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

ccctcgatctcgatgcccaatcgcacagcgtcga	CRISPR spacer
ccctcgatccccatgcccaatcgcttcatgaggt	Protospacer
*********.* ************ . ..*  *

226. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

227. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

228. spacer 9.1|4102283|38|LR134228|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

229. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.656

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gacggcgtggaggcgctcgcgcgcgtcgaggc	Protospacer
....** ***************** **   .

230. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.656

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
gcgggcctggaggccatcgcgcgcctcgcaca	Protospacer
.  .**********  *********** .  .

231. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

agtagcctggaggcgctcgcgcgcctcttcag	CRISPR spacer
ttcagcctggaggcgttcgagcgcctggagca	Protospacer
  .************.*** ******     .

232. spacer 1.25|1086415|33|LR134228|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

233. spacer 1.25|1086415|33|LR134228|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

234. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to MN695335 (Synechococcus phage B23, complete genome) position: , mismatch: 11, identity: 0.656

aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
caaatattttttgggtgataaaaaaagcgaca	Protospacer
 ** ************* ******  . . .

235. spacer 2.4|1113137|32|LR134228|CRISPRCasFinder,CRT matches to MN695334 (Synechococcus phage B3, complete genome) position: , mismatch: 11, identity: 0.656

aaattattttttgggtgttaaaaaccagattc	CRISPR spacer
caaatattttttgggtgataaaaaaagcgaca	Protospacer
 ** ************* ******  . . .

236. spacer 2.6|1113259|32|LR134228|CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

gttggtggggtgagcagttcgccgacgacccg	CRISPR spacer
cgcaccagggtgcgcagttcgccgaggacctc	Protospacer
  .. ..***** ************ ****.

237. spacer 2.9|1113442|32|LR134228|CRISPRCasFinder,CRT matches to NZ_AP014810 (Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence) position: , mismatch: 11, identity: 0.656

ttgcgcgggtgcgaaagttgacggtggatgaa	CRISPR spacer
ccttgcgggtgcgaaagtggacggggggctcg	Protospacer
.. .************** ***** **..  .

238. spacer 2.9|1113442|32|LR134228|CRISPRCasFinder,CRT matches to NC_010727 (Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence) position: , mismatch: 11, identity: 0.656

ttgcgcgggtgcgaaagttgacggtggatgaa	CRISPR spacer
ccttgcgggtgcgaaagtggacggggggctcg	Protospacer
.. .************** ***** **..  .

239. spacer 1.7|1085989|32|LR134228|CRISPRCasFinder,CRT matches to NC_009717 (Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence) position: , mismatch: 14, identity: 0.562

agtagcctggaggcgctcgcgcgcctcttcag----	CRISPR spacer
----atctggaggcgcgcgaccgcctcaaggccgag	Protospacer
    ..********** **  ******   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

685574 : 708018

Escherichia_phage(25.0%)

tRNA,portal,integrase,terminase,protease

attL 691301:691321|attR 708776:708796

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC66230.1\|685574_685907_+\|tRNA	putative tRNA-binding protein	NA	NA	NA	NA
VEC66232.1\|685948_687439_-	putrescine--2-oxoglutarate aminotransferase	A0A1V0SKB7	Klosneuvirus	2.2e-33	28.6
VEC66234.1\|687745_689266_+	aerotaxis receptor protein	A0A1B0V854	Salmonella_phage	3.1e-35	51.5
VEC66236.1\|689419_690043_-	putative transcriptional regulator	NA	NA	NA	NA
VEC66238.1\|690330_691095_+	siderophore-interacting protein	NA	NA	NA	NA
691301:691321	attL	NA	NA	NA	NA
VEC66240.1\|691374_692796_+\|integrase	integrase	NA	NA	NA	NA
VEC66242.1\|692788_693505_+	Uncharacterised protein	NA	NA	NA	NA
VEC66244.1\|693866_694529_+	putative prophage protein	NA	NA	NA	NA
VEC66246.1\|694521_694842_+	Uncharacterised protein	NA	NA	NA	NA
VEC66248.1\|694848_695148_+	putative prophage protein	NA	NA	NA	NA
VEC66250.1\|695144_696962_+	DNA primase	Q7M2A8	Enterobacteria_phage	1.5e-129	50.7
VEC66252.1\|697287_697539_+	Uncharacterised protein	NA	NA	NA	NA
VEC66254.1\|697683_697845_-	Uncharacterised protein	NA	NA	NA	NA
VEC66256.1\|697949_698489_+\|protease	protease/scaffold protein	A0A1W6JT88	Pseudomonas_phage	3.1e-38	64.0
VEC66258.1\|698436_698862_+\|integrase	putative integrase of prophage	A0A2H4JB45	uncultured_Caudovirales_phage	8.1e-26	45.5
VEC66260.1\|700647_701361_-	HEPN domain	NA	NA	NA	NA
VEC66262.1\|701506_701719_+	Uncharacterised protein	NA	NA	NA	NA
VEC66264.1\|701715_703632_+\|portal	phage portal protein, lambda family	K7PKX4	Enterobacterial_phage	2.1e-214	58.2
VEC66266.1\|704021_704912_-	Uncharacterised protein	NA	NA	NA	NA
VEC66268.1\|705664_707275_+\|portal	phage portal protein, lambda family	S5M7Q8	Escherichia_phage	4.7e-175	55.2
VEC66270.1\|707532_708018_+\|terminase	bacteriophage DNA packaging protein; terminase, small subunit	A0A291AWV8	Escherichia_phage	1.3e-48	66.9
708776:708796	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1127332 : 1137792

Escherichia_phage(57.14%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC67039.1\|1127332_1128325_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
VEC67041.1\|1128418_1129783_-	inner membrane permease YgbN	NA	NA	NA	NA
VEC67043.1\|1129871_1130648_-	hydroxypyruvate isomerase	NA	NA	NA	NA
VEC67045.1\|1130652_1131291_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
VEC67047.1\|1131287_1132550_-\|tRNA	paral putative tRNA synthase	A0A077SLJ7	Escherichia_phage	8.3e-135	61.0
VEC67049.1\|1132546_1133455_-	oxidoreductase YgbJ	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
VEC67051.1\|1133650_1134418_+	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
VEC67053.1\|1134468_1135125_-	serine/threonine-specific protein phosphatase 2	K7P7V3	Enterobacteria_phage	5.6e-50	45.3
VEC67055.1\|1135230_1137792_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.3e-30	20.6

DBSCAN-SWA_3

1217613 : 1227431

Enterobacteria_phage(87.5%)

integrase

attL 1216601:1216614|attR 1228801:1228814

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1216601:1216614	attL	NA	NA	NA	NA
VEC67208.1\|1217613_1219947_-	putative prophage DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.7
VEC67210.1\|1219961_1220282_-	P4 phage protein	NA	NA	NA	NA
VEC67212.1\|1220417_1220873_-	putative prophage protein	Q7M298	Enterobacteria_phage	1.6e-64	99.1
VEC67214.1\|1220865_1221153_-	prophage derepression protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
VEC67216.1\|1221145_1221343_-	regulator protein cI	Q7M2A7	Enterobacteria_phage	8.9e-28	98.5
VEC67218.1\|1221696_1221963_-	prophage regulatory protein	Q7M299	Enterobacteria_phage	4.9e-45	100.0
VEC67220.1\|1222515_1223250_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	3.9e-129	98.4
VEC67222.1\|1223246_1223747_+	transcriptional activator Ogr/delta	NA	NA	NA	NA
VEC67224.1\|1223820_1224393_+	prophage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-95	97.3
VEC67226.1\|1224591_1226229_-	Uncharacterised protein	NA	NA	NA	NA
VEC67228.1\|1226225_1227431_-\|integrase	putative phage integrase	A0A1B5FPC6	Escherichia_phage	2.0e-109	50.2
1228801:1228814	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1748999 : 1758441

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC67813.1\|1748999_1749926_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8
VEC67814.1\|1749930_1750662_+	ABC transporter permease	NA	NA	NA	NA
VEC67815.1\|1750642_1750750_-	putative inner membrane protein	NA	NA	NA	NA
VEC67816.1\|1750809_1751541_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
VEC67817.1\|1751762_1753448_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
VEC67818.1\|1753444_1754164_+	two-component response-regulatory protein YehT	NA	NA	NA	NA
VEC67819.1\|1754210_1754681_+	conserved protein, DUF1456 family	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
VEC67820.1\|1754721_1755183_-	lipoprotein yehR	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
VEC67821.1\|1755307_1757308_-	zinc finger SWIM domain-containing protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.4
VEC67822.1\|1757304_1758441_-	von Willebrand factor type A domain protein YehP	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7

DBSCAN-SWA_5

1774715 : 1840490

Escherichia_phage(46.67%)

tRNA,integrase,tail,terminase,protease,capsid,plate,holin,lysis

attL 1801958:1801984|attR 1836167:1836193

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC67829.1\|1774715_1776749_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	1.0e-54	27.8
VEC67830.1\|1776880_1777990_+	ATPase	NA	NA	NA	NA
VEC67831.1\|1778252_1778534_+	fimbrial-like adhesin protein	NA	NA	NA	NA
VEC67832.1\|1778826_1779369_+	fimbrial protein	NA	NA	NA	NA
VEC67833.1\|1779448_1779910_+	putative periplasmic pilin chaperone	NA	NA	NA	NA
VEC67834.1\|1780137_1782618_+	fimbrial outer membrane usher protein	NA	NA	NA	NA
VEC67835.1\|1782633_1783668_+	putative fimbrial adhesin	NA	NA	NA	NA
VEC67836.1\|1783749_1784088_-	periplasmic modulator of Ni and Co efflux	NA	NA	NA	NA
VEC67837.1\|1784306_1785131_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
VEC67838.1\|1785251_1785524_+	transcriptional repressor RcnR	NA	NA	NA	NA
VEC67839.1\|1785746_1786535_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
VEC67840.1\|1786531_1787332_+	phosphomethylpyrimidine kinase	NA	NA	NA	NA
VEC67841.1\|1787396_1788215_+	1,4-beta-N-acetylmuramidase	D0R7H8	Paenibacillus_phage	2.9e-24	38.5
VEC67842.1\|1788266_1789013_+	GntR family transcriptional regulator	NA	NA	NA	NA
VEC67843.1\|1788986_1789952_-	putative carbohydrate/pyrimidine kinase	NA	NA	NA	NA
VEC67844.1\|1789948_1790953_-	putative ADP-ribosylglycohydrolase	A0A1S6UB21	Serratia_phage	7.5e-14	29.4
VEC67845.1\|1790949_1792005_-	major facilitator superfamily protein	NA	NA	NA	NA
VEC67846.1\|1792485_1793538_+	fructose-bisphosphate aldolase	NA	NA	NA	NA
VEC67847.1\|1793845_1794700_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA
VEC67848.1\|1794728_1795991_+	putative tagatose 6-phosphate kinase	NA	NA	NA	NA
VEC67849.1\|1796000_1796453_+	galactitol-specific PTS system EIIA component	NA	NA	NA	NA
VEC67850.1\|1796483_1796768_+	galactitol-specific PTS system EIIB component	NA	NA	NA	NA
VEC67851.1\|1796771_1798127_+	galactitol-specific PTS system EIIC component	NA	NA	NA	NA
VEC67852.1\|1798174_1799215_+	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
VEC67853.1\|1799314_1800094_+	galactitol utilization operon repressor	NA	NA	NA	NA
VEC67854.1\|1800175_1801075_-	lipid kinase	A0A1V0SBJ0	Catovirus	1.7e-12	29.0
VEC67855.1\|1801480_1801798_+	protein	NA	NA	NA	NA
1801958:1801984	attL	NA	NA	NA	NA
VEC67856.1\|1802063_1802681_-\|integrase	phage integrase	Q83VS6	Escherichia_phage	2.2e-112	99.0
VEC67857.1\|1802884_1803076_-\|integrase	phage integrase	Q83VS6	Escherichia_phage	1.6e-10	94.1
VEC67858.1\|1803190_1803490_-	immunity repressor	Q1JS63	Enterobacteria_phage	2.5e-50	100.0
VEC67859.1\|1803604_1803880_+	regulatory protein	Q1JS62	Enterobacteria_phage	1.3e-48	100.0
VEC67860.1\|1803890_1804061_+	Uncharacterised protein	S4TNZ7	Salmonella_phage	6.1e-25	100.0
VEC67861.1\|1804057_1804558_+	Phage protein B	S4TTB7	Salmonella_phage	3.8e-91	99.4
VEC67862.1\|1804621_1804846_+	Protein of uncharacterised function (DUF2732)	S4TP68	Salmonella_phage	3.0e-32	98.6
VEC67863.1\|1804845_1805148_+	Uncharacterised protein	A0A0F7LDT6	Escherichia_phage	7.2e-45	97.0
VEC67864.1\|1805147_1805372_+	C4-type zinc finger protein, DksA/TraR family	S4TRY6	Salmonella_phage	2.9e-35	100.0
VEC67865.1\|1805368_1805644_+	relication initiation protein	Q858T5	Yersinia_virus	1.9e-44	98.9
VEC67866.1\|1805633_1807907_+	Replication gene A protein (GpA)	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.2
VEC67867.1\|1808017_1808938_+	Uncharacterised protein	NA	NA	NA	NA
VEC67868.1\|1808951_1809416_+	Uncharacterised protein	NA	NA	NA	NA
VEC67869.1\|1809417_1811439_+	ATPase involved in DNA repair	NA	NA	NA	NA
VEC67870.1\|1811750_1812785_-\|capsid	phage capsid protein	A0A0F7LDI7	Escherichia_phage	1.9e-201	100.0
VEC67871.1\|1812784_1814557_-	Terminase, ATPase subunit (GpP)	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.5
VEC67872.1\|1814730_1815585_+\|capsid	phage capsid scaffolding protein	Q94MI4	Enterobacteria_phage	3.1e-133	96.1
VEC67873.1\|1815643_1816717_+\|capsid	major capsid protein	Q94MK2	Enterobacteria_phage	1.1e-199	99.4
VEC67874.1\|1816720_1817470_+\|terminase	small terminase subunit	Q94MJ2	Enterobacteria_phage	1.0e-119	92.8
VEC67875.1\|1817569_1818079_+\|capsid	capsid completion protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
VEC67876.1\|1818078_1818282_+\|tail	phage tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
VEC67877.1\|1818285_1818567_+\|holin,lysis	phage lysis holin	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
VEC67878.1\|1818566_1819064_+	phage lysin	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
VEC67879.1\|1819078_1819504_+	LysA protein	A0A0F7LDU9	Escherichia_phage	1.9e-59	96.5
VEC67880.1\|1819491_1819917_+	LysB protein	A0A0F7L9Y0	Escherichia_phage	2.1e-66	97.2
VEC67881.1\|1819903_1820062_+\|lysis	phage lysis protein	A0A0F7LCN5	Escherichia_phage	2.6e-22	100.0
VEC67882.1\|1820024_1820492_+\|tail	tail protein	A0A0F7LA33	Escherichia_phage	2.5e-81	98.1
VEC67883.1\|1820484_1820937_+\|tail	tail protein	A0A0F7LDR6	Escherichia_phage	2.4e-76	99.3
VEC67884.1\|1821008_1821794_-	Uncharacterised protein	NA	NA	NA	NA
VEC67885.1\|1821877_1822513_+\|plate	Baseplate assembly protein V (GpV)	U5N3F0	Enterobacteria_phage	9.3e-111	96.7
VEC67886.1\|1822509_1822857_+\|plate	phage baseplate protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
VEC67887.1\|1822861_1823770_+\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	4.4e-162	99.3
VEC67888.1\|1823762_1824293_+\|tail	tail protein I (GpI)	A0A0F7LDF3	Escherichia_phage	1.0e-102	100.0
VEC67889.1\|1824303_1826553_+\|tail	putative tail fiber protein (GpH)	U5N099	Enterobacteria_phage	3.5e-136	56.2
VEC67890.1\|1826556_1827084_+\|tail	tail assembly chaperone gp38	U5N0T1	Enterobacteria_phage	2.9e-89	93.7
VEC67891.1\|1827255_1827594_+	Uncharacterised protein	NA	NA	NA	NA
VEC67892.1\|1827878_1828937_+	Uncharacterised protein	NA	NA	NA	NA
VEC67893.1\|1829462_1830653_+\|tail	major tail sheath protein FI	A0A0F7LBW9	Escherichia_phage	1.8e-224	99.2
VEC67894.1\|1830665_1831184_+\|tail	phage major tail tube protein FII	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
VEC67895.1\|1831240_1831516_+\|tail	tail protein E (GpE)	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
VEC67896.1\|1831660_1834108_+\|tail	phage related tail protein	Q858U7	Yersinia_virus	0.0e+00	95.6
VEC67897.1\|1834122_1834602_+	gpU phage protein	Q7Y4C7	Escherichia_virus	6.2e-83	96.2
VEC67898.1\|1834601_1835765_+	phage protein D	U5N3V4	Enterobacteria_phage	2.4e-205	99.5
VEC67899.1\|1835846_1836065_+	transcriptional activator Ogr/delta	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
VEC67900.1\|1836337_1837699_-\|protease	putative protease	Q6DW11	Phage_TP	1.6e-216	99.5
1836167:1836193	attR	NA	NA	NA	NA
VEC67901.1\|1837844_1838177_-	protein	NA	NA	NA	NA
VEC67902.1\|1838367_1839090_-	two-component response regulator	W8CYM9	Bacillus_phage	3.7e-31	33.6
VEC67903.1\|1839086_1840490_-	two-component sensor kinase	W8CYF6	Bacillus_phage	3.0e-32	29.0

DBSCAN-SWA_6

2339820 : 2456719

118

Enterobacteria_phage(34.43%)

portal,integrase,tail,terminase,protease,head,transposase,lysis

attL 2405382:2405398|attR 2451796:2451812

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC68574.1\|2339820_2340642_-\|protease	putative protease	NA	NA	NA	NA
VEC68575.1\|2340917_2341226_-	acid shock protein	NA	NA	NA	NA
VEC68576.1\|2341649_2342903_-	major facilitator superfamily protein	NA	NA	NA	NA
VEC68577.1\|2343009_2343903_+	LysR family transcriptional regulator	NA	NA	NA	NA
VEC68578.1\|2344037_2345258_+	protein Mlc (making large colonies protein)	NA	NA	NA	NA
VEC68579.1\|2345382_2346078_+	dithiobiotin synthetase	NA	NA	NA	NA
VEC68580.1\|2346030_2347287_-	voltage-gated ClC-type chloride channel	NA	NA	NA	NA
VEC68581.1\|2347481_2348096_-	anaerobic dimethyl sulfoxide reductase maturation protein (twin-arginine leader-binding protein)	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
VEC68582.1\|2348138_2348993_-	putative dimethyl sulfoxide reductase, anchor subunit	NA	NA	NA	NA
VEC68583.1\|2348994_2349612_-	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
VEC68584.1\|2349622_2352019_-	putative dimethyl sulfoxide reductase, olydopterin dinucleotide binding subunit	A0A077SK27	Escherichia_phage	8.2e-208	48.6
VEC68585.1\|2352106_2354533_-	putative dimethyl sulfoxide reductase, oxidoreductase subunit	A0A077SK27	Escherichia_phage	4.5e-214	49.2
VEC68586.1\|2354731_2355037_-	protein	NA	NA	NA	NA
VEC68587.1\|2355108_2355855_+	lipoprotein	NA	NA	NA	NA
VEC68588.1\|2355857_2356418_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
VEC68589.1\|2356452_2356794_-	protein	NA	NA	NA	NA
VEC68590.1\|2356928_2357255_+	inner membrane protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
VEC68591.1\|2357460_2358675_+	starvation sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
VEC68592.1\|2358686_2359706_+	dehydrogenase	E3SJ82	Synechococcus_phage	3.7e-16	25.9
VEC68593.1\|2359893_2361174_-\|integrase	defective integrase; Qin prophage	B6DZ48	Enterobacteria_phage	6.6e-156	62.3
VEC68594.1\|2361208_2361445_-	putative excisionase	S4TND0	Salmonella_phage	6.1e-15	50.7
VEC68595.1\|2361532_2364004_-	putative exonuclease from phage origin	A0A192Y6E0	Salmonella_phage	8.5e-59	56.7
VEC68596.1\|2364097_2364289_-	putative prophage protein	NA	NA	NA	NA
VEC68597.1\|2364285_2364474_-	division inhibition protein	NA	NA	NA	NA
VEC68598.1\|2364960_2365536_-	putative prophage protein	NA	NA	NA	NA
VEC68599.1\|2365537_2365693_-	putative prophage protein	M4QQ57	Salicola_phage	8.8e-07	51.1
VEC68600.1\|2365885_2366344_-	transcriptional repressor DicA	I6PD69	Cronobacter_phage	2.8e-24	46.2
VEC68601.1\|2366370_2366598_+	DNA-binding transcriptional regulator DicC	NA	NA	NA	NA
VEC68602.1\|2366581_2367103_+	YdfX	NA	NA	NA	NA
VEC68603.1\|2367083_2368049_+	ybl78	U5P0A0	Shigella_phage	1.9e-54	60.6
VEC68604.1\|2368089_2368509_+	exclusion protein	A0A0U2QQN3	Escherichia_phage	1.3e-55	93.4
VEC68605.1\|2368542_2369883_+\|integrase,transposase	putative integrase/transposase	NA	NA	NA	NA
VEC68606.1\|2370319_2370652_-	Qin prophage protein	NA	NA	NA	NA
VEC68607.1\|2371184_2371424_+	antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
VEC68608.1\|2371423_2371711_+	toxin of the RelE-RelB toxin-antitoxin system	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
VEC68609.1\|2371782_2371938_+	putative host cell-killing modulation protein	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
VEC68610.1\|2372154_2372406_+	putative prophage protein	NA	NA	NA	NA
VEC68611.1\|2372752_2373802_+	putative prophage protein	A0A291AWV9	Escherichia_phage	1.3e-112	57.3
VEC68612.1\|2373815_2374568_+	lambdoid prophage Qin antitermination protein Q-like protein	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
VEC68613.1\|2374989_2375202_-	cold shock-like protein CspF	NA	NA	NA	NA
VEC68614.1\|2376480_2376687_+\|lysis	phage lysis protein	A5LH82	Enterobacteria_phage	4.5e-30	94.1
VEC68615.1\|2376691_2377003_+	Qin prophage protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
VEC68616.1\|2376999_2377533_+	prophage lysozyme (endolysin)	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
VEC68617.1\|2377529_2377976_+	Qin prophage protein	A0A291LBG9	Klebsiella_phage	6.3e-05	49.1
VEC68618.1\|2379275_2379449_+	GnsA/GnsB family transcriptional regulator	NA	NA	NA	NA
VEC68619.1\|2379600_2380011_-	putative envelope protein	C6ZCX4	Enterobacteria_phage	2.1e-63	89.0
VEC68620.1\|2380311_2380518_+	DLP12 prophage; predicted protein	A0A0K2FJ18	Enterobacteria_phage	6.7e-26	91.2
VEC68621.1\|2380538_2380706_-	Uncharacterised protein	NA	NA	NA	NA
VEC68622.1\|2381090_2381618_+\|terminase	putative terminase small subunit	A5LH26	Enterobacteria_phage	2.1e-92	100.0
VEC68623.1\|2381626_2383726_+\|terminase	terminase large subunit	A5LH27	Enterobacteria_phage	0.0e+00	96.4
VEC68624.1\|2383722_2383935_+	prophage protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
VEC68625.1\|2383934_2385443_+\|head,tail,portal	portal protein (head-tail preconnector protein) from prophage	A5LH29	Enterobacteria_phage	3.1e-290	100.0
VEC68626.1\|2385387_2386833_+\|protease	ATP-dependent Clp protease proteolytic subunit	A5LH30	Enterobacteria_phage	8.1e-235	99.3
VEC68627.1\|2386835_2387414_+\|protease	ATP-dependent Clp protease proteolytic subunit	A5LH30	Enterobacteria_phage	1.4e-100	100.0
VEC68628.1\|2387500_2387824_+	prophage protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
VEC68629.1\|2387816_2388092_+	prophage protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
VEC68630.1\|2388103_2388682_+\|tail	Minor tail protein Z (GPZ) of prophage	A5LH33	Enterobacteria_phage	6.1e-101	99.0
VEC68631.1\|2388678_2389080_+\|tail	Minor tail protein U	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
VEC68632.1\|2389091_2389835_+\|tail	Major tail protein V	A0A291AWU6	Escherichia_phage	7.8e-133	100.0
VEC68633.1\|2389895_2390282_+\|tail	minor tail component of prophage	A0A291AWW5	Escherichia_phage	3.6e-65	99.2
VEC68634.1\|2390290_2390620_+\|tail	minor tail protein T of prophage	A5LH37	Enterobacteria_phage	7.6e-56	100.0
VEC68635.1\|2390591_2393657_+\|tail	putative tail length tape measure protein from putative prophage	A0A291AWX1	Escherichia_phage	0.0e+00	99.2
VEC68636.1\|2393656_2393986_+\|tail	Minor tail protein M	A5LH39	Enterobacteria_phage	1.7e-60	100.0
VEC68637.1\|2393995_2394694_+\|tail	phage minor tail protein	A5LH40	Enterobacteria_phage	6.8e-131	97.4
VEC68638.1\|2394698_2395442_+\|tail	putative tail fiber component K of prophage	K7PLW1	Enterobacteria_phage	9.2e-150	98.4
VEC68639.1\|2395438_2395987_+	Tail assembly protein I from prophage	A0A291AWV5	Escherichia_phage	1.1e-94	100.0
VEC68640.1\|2396047_2399446_+	Host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	88.6
VEC68641.1\|2399512_2400112_+	outer membrane precursor Lom	A0A0P0ZCF6	Stx2-converting_phage	1.3e-109	97.5
VEC68642.1\|2400673_2401411_-	Uncharacterised protein	NA	NA	NA	NA
VEC68643.1\|2401541_2403200_+\|tail	tail fiber protein	U5N099	Enterobacteria_phage	8.8e-76	56.9
VEC68644.1\|2403872_2404463_-	putative DNA-invertase	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
VEC68645.1\|2404780_2405014_-	Qin prophage DNA-binding transcriptional regulator	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
2405382:2405398	attL	NA	NA	NA	NA
VEC68646.1\|2405800_2407084_+	metabolite transport protein YdfJ	NA	NA	NA	NA
VEC68647.1\|2407172_2408633_+	putative sugar dehydrogenase	H8ZJP8	Ostreococcus_tauri_virus	1.5e-42	29.2
VEC68648.1\|2408668_2408872_-	selenium carrying protein	J9Q802	Salmonella_phage	1.6e-11	55.2
VEC68649.1\|2409048_2409735_-	GntR family transcriptional regulator	NA	NA	NA	NA
VEC68650.1\|2409823_2410570_-	NADP-dependent L-serine/L-allo-threonine dehydrogenase	NA	NA	NA	NA
VEC68651.1\|2410706_2412752_+	dipeptidyl carboxypeptidase II	NA	NA	NA	NA
VEC68652.1\|2412795_2413314_-	competence damage-inducible protein A	NA	NA	NA	NA
VEC68653.1\|2413589_2413982_+	stress response protein	NA	NA	NA	NA
VEC68654.1\|2414236_2415127_+	putative signal transduction protein	A0A127AWB9	Bacillus_phage	1.1e-19	37.7
VEC68655.1\|2415567_2416755_-	major facilitator superfamily protein	NA	NA	NA	NA
VEC68656.1\|2416949_2417849_+	amino acid metabolite efflux	NA	NA	NA	NA
VEC68657.1\|2417878_2418097_-	multiple antibiotic resistance protein	NA	NA	NA	NA
VEC68658.1\|2418128_2418512_-	DNA-binding transcriptional activator MarA	D0R0F8	Streptococcus_phage	4.7e-09	32.3
VEC68659.1\|2418531_2418966_-	multiple antibiotic resistance regulatory protein	NA	NA	NA	NA
VEC68660.1\|2419177_2419843_+	multiple antibiotic resistance protein	NA	NA	NA	NA
VEC68661.1\|2419867_2421058_-	sugar efflux transporter	NA	NA	NA	NA
VEC68662.1\|2421207_2421456_-	protein	NA	NA	NA	NA
VEC68663.1\|2421418_2422324_-	protein	NA	NA	NA	NA
VEC68664.1\|2422401_2423283_-	transcriptional regulator YneJ	NA	NA	NA	NA
VEC68665.1\|2423383_2424772_+	succinate semialdehyde dehydrogenase	NA	NA	NA	NA
VEC68666.1\|2424835_2425762_+	glutaminase 2	NA	NA	NA	NA
VEC68667.1\|2425761_2426121_+	putative cytoplasmic protein	NA	NA	NA	NA
VEC68668.1\|2426232_2427180_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.6e-19	36.1
VEC68669.1\|2427406_2428858_+	altronate oxidoreductase	NA	NA	NA	NA
VEC68670.1\|2429064_2429979_+	inner membrane protein	NA	NA	NA	NA
VEC68671.1\|2429982_2430741_-	trans-aconitate methyltransferase	NA	NA	NA	NA
VEC68672.1\|2430797_2431088_-	autoinducer-2 (AI-2) modifying protein LsrG	NA	NA	NA	NA
VEC68673.1\|2431111_2431987_-	putative aldolase	NA	NA	NA	NA
VEC68674.1\|2432013_2433036_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
VEC68675.1\|2433047_2434040_-	ABC transporter permease	NA	NA	NA	NA
VEC68676.1\|2434039_2435068_-	ABC transporter permease	NA	NA	NA	NA
VEC68677.1\|2435061_2436597_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.7e-20	30.4
VEC68678.1\|2436845_2437799_+	putative sugar-binding regulatory protein	NA	NA	NA	NA
VEC68679.1\|2437877_2439470_+	putative carbohydrate kinase	NA	NA	NA	NA
VEC68680.1\|2440000_2445421_+	lipoprotein/autotransporter domain-containing protein	A0A2L1IV18	Escherichia_phage	2.1e-142	38.2
VEC68681.1\|2445643_2445910_+	DNA-binding transcriptional regulator HipB	NA	NA	NA	NA
VEC68682.1\|2445909_2447232_+	protein hipA	NA	NA	NA	NA
VEC68683.1\|2447427_2448549_+\|integrase	Phage integrase	A0A2L1IV26	Escherichia_phage	2.2e-06	100.0
VEC68684.1\|2448483_2448861_-\|transposase	IS1 transposase	Q71TF0	Escherichia_phage	3.8e-67	99.2
VEC68685.1\|2448905_2449181_-\|transposase	IS1 transposase	Q71TE9	Escherichia_phage	2.0e-46	98.9
VEC68686.1\|2449334_2450285_-	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
VEC68687.1\|2450654_2450969_+	protein	NA	NA	NA	NA
VEC68688.1\|2450997_2451273_+\|transposase	IS1 transposase	Q71TE9	Escherichia_phage	2.0e-46	98.9
VEC68689.1\|2451317_2451695_+\|transposase	IS1 transposase	Q71TF0	Escherichia_phage	3.8e-67	99.2
VEC68690.1\|2452038_2454489_-	RNA polymerase sigma factor	NA	NA	NA	NA
2451796:2451812	attR	NA	NA	NA	NA
VEC68691.1\|2454490_2456719_-	Putative helicase	Q9T1H9	Lactobacillus_phage	3.0e-23	25.8

DBSCAN-SWA_7

2614140 : 2675961

Escherichia_phage(50.0%)

tRNA,integrase,tail,terminase,coat,lysis

attL 2633594:2633609|attR 2676313:2676328

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC68817.1\|2614140_2615274_+	outer membrane protein N (porin)	Q1MVN1	Enterobacteria_phage	1.1e-117	58.8
VEC68818.1\|2615414_2615849_+	putative universal stress protein	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
VEC68819.1\|2616807_2617041_+	Qin prophage DNA-binding transcriptional regulator	A0A192Y6D5	Salmonella_phage	4.1e-32	87.0
VEC68820.1\|2617357_2617948_+	putative DNA-invertase	A0A0A7NPV4	Enterobacteria_phage	2.8e-24	38.8
VEC68821.1\|2618328_2618418_-	Uncharacterised protein	NA	NA	NA	NA
VEC68822.1\|2618467_2619430_+	Mu prophage; Tail fiber protein	A0A0A7NV63	Enterobacteria_phage	4.0e-174	91.1
VEC68823.1\|2619433_2619961_+\|tail	tail fiber assembly protein	A0A077SK10	Escherichia_phage	1.9e-93	98.3
VEC68824.1\|2619989_2620523_-\|tail	tail fiber assembly protein (gpg)	C9DGR0	Escherichia_phage	6.4e-97	99.4
VEC68825.1\|2620525_2623495_-\|tail	side tail fiber protein from lambdoid prophage	Q1MVL8	Enterobacteria_phage	1.3e-202	60.3
VEC68826.1\|2623559_2624159_-	membrane protein, Lom/All family	H6WZM8	Escherichia_phage	1.6e-107	95.0
VEC68827.1\|2624226_2627706_-	Host specificity protein J of prophage	A0A291AWT4	Escherichia_phage	0.0e+00	90.4
VEC68828.1\|2627766_2628309_-\|tail	putative phage tail component	A0A291AWV5	Escherichia_phage	5.4e-75	81.9
VEC68829.1\|2628305_2628905_-\|tail	tail component	A5LH41	Enterobacteria_phage	5.7e-118	97.5
VEC68830.1\|2629054_2629753_-\|tail	phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	1.1e-125	93.5
VEC68831.1\|2629752_2630049_-\|tail	putative phage minor tail protein	H6WZM2	Escherichia_phage	1.8e-24	52.0
VEC68832.1\|2630083_2632549_-\|tail	putative phage tail length tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	4.0e-109	35.9
2633594:2633609	attL	NA	NA	NA	NA
VEC68833.1\|2633967_2634630_-\|tail	putative phage tail protein	NA	NA	NA	NA
VEC68834.1\|2635103_2635553_-	Uncharacterised protein	NA	NA	NA	NA
VEC68835.1\|2635613_2636576_-	Uncharacterised protein	A0A059VG08	Pseudomonas_phage	4.5e-56	39.2
VEC68836.1\|2636602_2636995_-	phage protein	NA	NA	NA	NA
VEC68837.1\|2636991_2637372_-	Uncharacterised protein	A0A059VF88	Pseudomonas_phage	1.1e-18	44.4
VEC68838.1\|2637372_2637756_-	Uncharacterised protein	A0A0P0I456	Acinetobacter_phage	2.2e-14	39.4
VEC68839.1\|2637755_2638151_-	Uncharacterised protein	NA	NA	NA	NA
VEC68840.1\|2638154_2638331_-	Uncharacterised protein	G8C7P8	Escherichia_phage	4.7e-12	62.3
VEC68841.1\|2638373_2639513_-\|coat	P22 coat protein - gene protein 5	G8C7P7	Escherichia_phage	7.4e-159	75.0
VEC68842.1\|2639611_2640376_-	Uncharacterised protein	G8C7P6	Escherichia_phage	6.9e-84	64.2
VEC68843.1\|2640480_2641596_-	phage protein	I6PD76	Cronobacter_phage	4.2e-114	54.4
VEC68844.1\|2641576_2642983_-	Uncharacterised protein	G8C7P4	Escherichia_phage	3.0e-186	69.0
VEC68845.1\|2642985_2643972_-\|terminase	phage terminase	A0A1B1P9C9	Acinetobacter_phage	1.2e-99	56.4
VEC68846.1\|2644266_2645361_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	5.9e-113	80.5
VEC68847.1\|2645364_2645574_-	Uncharacterised protein	NA	NA	NA	NA
VEC68848.1\|2645551_2646484_-	Uncharacterised protein	A0A1B1INP7	uncultured_Mediterranean_phage	9.3e-83	54.5
VEC68849.1\|2646476_2647268_-	ParB-like nuclease	R4TG31	Halovirus	3.7e-48	40.2
VEC68850.1\|2647405_2648830_-	Rac prophage; potassium transporter subunit	NA	NA	NA	NA
VEC68851.1\|2649000_2649465_-\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	4.8e-72	94.1
VEC68852.1\|2649461_2649959_-	phage lysozome	M1FJA0	Enterobacteria_phage	9.3e-90	96.4
VEC68853.1\|2649958_2650174_-\|lysis	phage lysis protein	A5LH82	Enterobacteria_phage	1.3e-32	94.4
VEC68854.1\|2650425_2650821_-	tolA protein (fragment) of prophage	NA	NA	NA	NA
VEC68855.1\|2650971_2651400_-	TolA protein (fragment) of prophage	NA	NA	NA	NA
VEC68856.1\|2652178_2652316_-	Uncharacterised protein	NA	NA	NA	NA
VEC68857.1\|2652444_2652987_-	antitermination protein	A0A0U2S606	Escherichia_phage	2.9e-76	75.7
VEC68858.1\|2652983_2653274_-	phage protein	A0A0U2KD41	Escherichia_phage	3.7e-46	87.5
VEC68859.1\|2653273_2653873_-	phage protein	A0A0U2RT94	Escherichia_phage	1.1e-105	92.0
VEC68860.1\|2655066_2656116_-	Uncharacterised protein	NA	NA	NA	NA
VEC68861.1\|2656643_2658326_-	Uncharacterized conserved protein	NA	NA	NA	NA
VEC68862.1\|2658616_2658994_-	putative prophage protein	A0A0U2QQN3	Escherichia_phage	1.6e-54	88.8
VEC68863.1\|2659009_2659771_-	transcription regulatory protein	A0A0U2SAW4	Escherichia_phage	8.0e-117	87.7
VEC68864.1\|2659793_2660540_-	putative phage DNA replication protein	V5UQI5	Shigella_phage	3.8e-111	78.9
VEC68865.1\|2660546_2661404_-	phage protein	A0A0U2RT81	Escherichia_phage	8.3e-70	84.5
VEC68866.1\|2661416_2661839_-	Protein of uncharacterised function (DUF1019)	A0A0U2RXZ9	Escherichia_phage	1.5e-69	95.0
VEC68867.1\|2661861_2662158_-	Rac prophage; putative DNA-binding transcriptional regulator	A0A0R6PH31	Moraxella_phage	9.6e-10	44.9
VEC68868.1\|2662281_2662758_+	Rac prophage; putative DNA-binding transcriptional regulator	A0A2D1GNH0	Pseudomonas_phage	2.2e-11	53.4
VEC68869.1\|2663067_2663202_+	Rac prophage protein	NA	NA	NA	NA
VEC68870.1\|2663212_2663368_+	Rac prophage; predicted protein	M4QQ57	Salicola_phage	6.1e-08	55.3
VEC68871.1\|2663364_2663976_-	prophage CP-933R superinfection exclusion protein	NA	NA	NA	NA
VEC68872.1\|2664294_2664516_+	FtsZ inhibitor protein	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
VEC68873.1\|2664515_2664686_+	Rac prophage; zinc-binding protein	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
VEC68874.1\|2664760_2665036_+	putative bacteriophage protein	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
VEC68875.1\|2665137_2667738_+	exonuclease VIII	A0A0U2I1R6	Escherichia_phage	3.9e-248	63.5
VEC68876.1\|2667730_2668540_+	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	8.8e-106	71.5
VEC68877.1\|2668783_2668993_+	gydaC	A0A0U2QL97	Escherichia_phage	6.1e-27	98.4
VEC68878.1\|2669071_2669287_+	excisionase	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
VEC68879.1\|2669288_2670524_+\|integrase	phage integrase	A0A0U2JGI6	Escherichia_phage	1.6e-239	98.5
VEC68880.1\|2670575_2671511_+\|tRNA	C32 tRNA thiolase	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
VEC68881.1\|2671639_2673013_-	ATP-independent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
VEC68882.1\|2673042_2673216_-	Uncharacterised protein	NA	NA	NA	NA
VEC68883.1\|2673490_2674474_-	zinc transport protein	NA	NA	NA	NA
VEC68884.1\|2674728_2675961_+	putative signaling protein	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
2676313:2676328	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2875887 : 2927845

Escherichia_phage(45.45%)

tRNA,portal,integrase,tail,terminase,protease,capsid,head,transposase

attL 2884178:2884192|attR 2927947:2927961

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC69081.1\|2875887_2876994_+\|tRNA	tRNA-specific 2-thiouridylase MnmA	NA	NA	NA	NA
VEC69082.1\|2877029_2877671_+	putative lysogenization regulator	NA	NA	NA	NA
VEC69083.1\|2877674_2879045_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
VEC69084.1\|2879212_2879884_+	two-component response regulator	NA	NA	NA	NA
VEC69085.1\|2879883_2881344_+	two-component sensor kinase	NA	NA	NA	NA
VEC69086.1\|2881419_2882541_+	cupin superfamily protein family	NA	NA	NA	NA
VEC69087.1\|2882686_2883916_-	peptidase T	NA	NA	NA	NA
VEC69088.1\|2884165_2885302_+	spermidine/putrescine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
2884178:2884192	attL	NA	NA	NA	NA
VEC69089.1\|2885285_2886149_+	spermidine/putrescine ABC transporter membrane protein	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
VEC69090.1\|2886580_2887780_-\|tail	tail fiber protein (modular protein)	A0A0P0ZCC1	Stx2-converting_phage	1.6e-39	69.6
VEC69091.1\|2887842_2888442_-	membrane protein, Lom/All family	H6WZM8	Escherichia_phage	1.6e-104	93.5
VEC69092.1\|2888509_2891989_-	Host specificity protein J of prophage	A0A291AWT4	Escherichia_phage	0.0e+00	88.7
VEC69093.1\|2892049_2892598_-	Tail assembly protein I from prophage	A0A291AWV5	Escherichia_phage	1.5e-93	97.3
VEC69094.1\|2892594_2893194_-\|tail	tail component	K7PLW1	Enterobacteria_phage	2.3e-119	98.0
VEC69095.1\|2893342_2894041_-\|tail	phage minor tail protein	A0A1B5FP81	Escherichia_phage	7.6e-130	96.6
VEC69096.1\|2894040_2894382_-\|tail	prophage minor tail protein	A0A0P0ZDL9	Stx2-converting_phage	1.2e-40	66.4
VEC69097.1\|2894374_2897602_-\|tail	phage-related minor tail protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.1
VEC69098.1\|2897647_2897938_-	prophage protein	A0A1B5FP87	Escherichia_phage	1.7e-43	98.9
VEC69099.1\|2897949_2898321_-\|tail	tail assembly chaperone	A0A1B5FP91	Escherichia_phage	6.5e-64	100.0
VEC69100.1\|2898335_2899091_-\|tail	phage major tail subunit	A0A1B5FP82	Escherichia_phage	1.2e-117	96.2
VEC69101.1\|2899099_2899444_-	putative prophage protein	A0A1B5FP84	Escherichia_phage	4.2e-57	100.0
VEC69102.1\|2899440_2899887_-	prophage protein	S4TR46	Salmonella_phage	2.3e-63	80.4
VEC69103.1\|2899886_2900225_-\|head,tail	putative prophage head-tail adaptor	A0A1B5FP90	Escherichia_phage	1.6e-56	99.1
VEC69104.1\|2900233_2900539_-	phage protein	A0A1B5FP86	Escherichia_phage	9.2e-40	100.0
VEC69105.1\|2900550_2900739_-	phage protein	A0A1B5FP98	Escherichia_phage	7.2e-27	100.0
VEC69106.1\|2900790_2901996_-\|capsid	major capsid protein	U5P0G9	Shigella_phage	8.5e-222	99.0
VEC69107.1\|2902010_2902661_-\|head,protease	pro-head protease	U5P4H2	Shigella_phage	2.5e-119	100.0
VEC69108.1\|2902638_2903880_-\|portal	phage portal protein	U5P411	Shigella_phage	1.3e-241	99.3
VEC69109.1\|2903879_2904062_-	prophage protein	A0A1B5FP99	Escherichia_phage	1.1e-24	96.7
VEC69110.1\|2904073_2905831_-\|terminase	phage terminase	A0A1B5FP96	Escherichia_phage	0.0e+00	99.3
VEC69111.1\|2905830_2906313_-\|terminase	putative prophage terminase, small subunit	A0A1B5FPA0	Escherichia_phage	5.7e-84	97.5
VEC69112.1\|2906461_2906812_-	putative prophage endonuclease	A0A1B5FP94	Escherichia_phage	4.3e-65	98.3
VEC69113.1\|2906950_2907490_+	Uncharacterised protein	NA	NA	NA	NA
VEC69114.1\|2907495_2907762_-	Uncharacterised protein	NA	NA	NA	NA
VEC69115.1\|2907917_2908385_-	endopeptidase	A5LH84	Enterobacteria_phage	2.1e-67	90.3
VEC69116.1\|2908381_2908915_-	membrane-associated lysozyme; Qin prophage	Q08J98	Stx2-converting_phage	4.8e-100	94.4
VEC69117.1\|2908978_2909329_-	putative prophage protein	K7PGU6	Enterobacteria_phage	1.4e-36	94.0
VEC69118.1\|2909333_2909549_-	Lysis protein S	M1FN85	Enterobacteria_phage	5.3e-34	98.6
VEC69119.1\|2910361_2911051_-	Q antiterminator encoded by prophage CP-933P	I6PDF8	Cronobacter_phage	2.8e-60	51.1
VEC69120.1\|2911047_2911413_-	Holliday junction resolvase	V5URS4	Shigella_phage	7.1e-39	67.5
VEC69121.1\|2911413_2912541_-	phage protein	U5P0K4	Shigella_phage	9.5e-90	48.4
VEC69122.1\|2913581_2913737_-	putative host cell-killing modulation protein	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
VEC69123.1\|2913808_2914096_-	toxin of the RelE-RelB toxin-antitoxin system	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
VEC69124.1\|2914095_2914335_-	antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
VEC69125.1\|2914867_2915200_+	Qin prophage protein	NA	NA	NA	NA
VEC69126.1\|2915636_2916977_-\|integrase,transposase	putative integrase/transposase	NA	NA	NA	NA
VEC69127.1\|2917677_2918487_+	Uncharacterised protein	A0A0F7L9X0	Escherichia_phage	3.2e-156	95.2
VEC69128.1\|2918633_2919056_-	phage protein	A0A0U2QQN3	Escherichia_phage	9.7e-64	89.2
VEC69129.1\|2919096_2920167_-	replication protein	A0A088CD36	Shigella_phage	4.2e-63	65.2
VEC69130.1\|2920238_2920664_-	phage regulatory protein	NA	NA	NA	NA
VEC69131.1\|2920660_2920876_-	putative antirepressor protein	NA	NA	NA	NA
VEC69132.1\|2920925_2921642_+	Putative SOS-response transcriptional repressor	H9C160	Pectobacterium_phage	1.1e-51	42.0
VEC69133.1\|2921833_2922070_+	putative prophage protein	M4QQ57	Salicola_phage	4.6e-07	53.2
VEC69134.1\|2922071_2922200_+	putative prophage protein	NA	NA	NA	NA
VEC69135.1\|2922229_2922448_+	putative prophage protein	NA	NA	NA	NA
VEC69136.1\|2922470_2922800_+	Uncharacterised protein	NA	NA	NA	NA
VEC69137.1\|2922768_2923206_-	Uncharacterised protein	NA	NA	NA	NA
VEC69138.1\|2923610_2923832_+	FtsZ inhibitor protein	A0A0U2RTC4	Escherichia_phage	4.3e-31	82.2
VEC69139.1\|2923955_2926427_+	exonuclease from phage origin	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
VEC69140.1\|2926488_2926758_+	excisionase for prophage	NA	NA	NA	NA
VEC69141.1\|2926726_2927845_+\|integrase	prophage lambda integrase	Q77Z04	Phage_21	7.7e-84	44.2
2927947:2927961	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3527411 : 3586678

Enterobacteria_phage(53.7%)

portal,tRNA,integrase,tail,terminase,protease,capsid,head,coat,lysis

attL 3526942:3526988|attR 3576482:3576528

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3526942:3526988	attL	NA	NA	NA	NA
VEC69853.1\|3527411_3528365_+\|protease	outer membrane protease	NA	NA	NA	NA
VEC69855.1\|3528837_3529353_-	DNA-binding transcriptional activator	NA	NA	NA	NA
VEC69857.1\|3530227_3530884_+	methylase	NA	NA	NA	NA
VEC69859.1\|3531522_3534750_-\|tail	tail fiber protein	X2KTY7	Enterobacteria_phage	6.4e-06	58.8
VEC69861.1\|3534814_3535414_-	outer membrane precursor Lom	A0A291AWV3	Escherichia_phage	2.6e-110	97.5
VEC69863.1\|3535480_3538879_-	Host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.2
VEC69865.1\|3538938_3539511_-\|tail	phage tail assembly protein	A0A0K2FJB0	Escherichia_phage	6.3e-82	97.9
VEC69867.1\|3539507_3540107_-\|tail	putative tail fiber component K of prophage	A0A291AWX4	Escherichia_phage	1.4e-116	96.5
VEC69869.1\|3540256_3540955_-\|tail	phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.8
VEC69871.1\|3540954_3541284_-\|tail	Minor tail protein M	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
VEC69873.1\|3541280_3543842_-\|tail	tail component of prophage	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.3
VEC69875.1\|3543834_3544269_-\|tail	minor tail protein T	A0A0K2FJB3	Enterobacteria_phage	2.0e-64	99.2
VEC69876.1\|3544250_3544673_-\|tail	phage minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	8.2e-71	96.4
VEC69878.1\|3544688_3545429_-\|tail	Major tail protein V	A0A0K2FJ05	Enterobacteria_phage	6.1e-130	98.0
VEC69880.1\|3545436_3545832_-\|tail	phage minor tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
VEC69882.1\|3545828_3546407_-\|tail	minor tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	97.9
VEC69884.1\|3546418_3546772_-\|capsid	minor capsid protein	A0A2R9YJJ5	Escherichia_phage	1.5e-62	99.1
VEC69886.1\|3546783_3547179_-	DNA packaging protein from bacteriophage origin	A0A2R9YJP4	Escherichia_phage	2.4e-56	93.2
VEC69888.1\|3547220_3548246_-\|head,coat	phage major head protein (major coat protein)	C6ZCY2	Enterobacteria_phage	9.0e-188	97.4
VEC69890.1\|3548301_3548634_-	Head decoration protein from bacteriophage origin	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
VEC69892.1\|3548643_3549963_-\|capsid	minor capsid protein C from bacteriophage origin	A0A2I6TC87	Escherichia_phage	3.8e-231	97.9
VEC69894.1\|3549943_3551545_-\|capsid,portal	phage portal protein (minor capsid protein)	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
VEC69896.1\|3551541_3551748_-\|head,tail	head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
VEC69898.1\|3551744_3553670_-\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
VEC69900.1\|3553644_3554190_-	prophage qsr' DNA packaging protein NU1-like protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
VEC69902.1\|3554868_3555279_+	phage protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
VEC69904.1\|3555324_3555489_+\|tRNA	Arginyl-tRNA synthetase	NA	NA	NA	NA
VEC69906.1\|3555630_3555783_-	bacteriophage protein (Gene 65)	K7PKL2	Enterobacteria_phage	3.1e-20	96.0
VEC69908.1\|3555770_3556238_-	Endopeptidase from phage origin (Lysis protein Rz)	A0A2D1GLQ7	Escherichia_phage	1.1e-73	96.1
VEC69910.1\|3556234_3556732_-	phage lysozome	M1FJA0	Enterobacteria_phage	5.6e-87	95.2
VEC69912.1\|3556731_3556947_-\|lysis	phage lysis protein	A5LH82	Enterobacteria_phage	9.0e-34	100.0
VEC69914.1\|3557520_3558603_+	outer membrane porin protein NmpC	Q1MVN1	Enterobacteria_phage	6.8e-162	78.4
VEC69916.1\|3558791_3559175_-	lambdoid prophage DLP12 antitermination protein Q	A0A088CD47	Shigella_phage	4.4e-55	83.3
VEC69918.1\|3559260_3559398_-	DLP12 prophage; small protein	K7PHH3	Enterobacteria_phage	1.1e-08	70.7
VEC69920.1\|3559397_3559760_-	endodeoxyribonuclease RUS	K7PM48	Enterobacteria_phage	4.3e-60	96.5
VEC69922.1\|3559756_3560047_-	DLP12 prophage	K7PGZ6	Enterobacteria_phage	2.8e-46	92.7
VEC69924.1\|3560039_3560210_-	prophage protein NinE	K7P7K0	Enterobacteria_phage	1.4e-13	69.8
VEC69926.1\|3560209_3560665_-	DLP12 prophage; DNA base-flipping protein	I6PD71	Cronobacter_phage	4.9e-61	67.5
VEC69928.1\|3560852_3561209_-	Uncharacterised protein	NA	NA	NA	NA
VEC69930.1\|3561670_3561994_-	antirepressor protein	NA	NA	NA	NA
VEC69932.1\|3562105_3563632_-	site-specific invertase; DLP12 prophage	Q3HQV4	Burkholderia_phage	3.6e-31	27.7
VEC69934.1\|3565327_3565534_-	multidrug efflux protein	NA	NA	NA	NA
VEC69936.1\|3565601_3565904_-	Ren protein from phage origin	A0A0N6WES4	Escherichia_phage	1.7e-41	93.5
VEC69937.1\|3565900_3566602_-	replication protein P of bacteriophage	M1FJ72	Enterobacteria_phage	7.9e-127	97.4
VEC69939.1\|3566598_3567603_-	replication protein O	M1FN81	Enterobacteria_phage	2.3e-111	67.6
VEC69941.1\|3567614_3568154_-	bacteriophage regulatory protein CII	M9NZI6	Enterobacteria_phage	1.5e-61	66.1
VEC69943.1\|3568184_3568412_-	represror Cro	Q76H55	Enterobacteria_phage	2.9e-22	69.0
VEC69945.1\|3568729_3569215_+	Regulatory protein CI from bacteriophage origin	Q76H56	Enterobacteria_phage	7.0e-74	90.4
VEC69947.1\|3569321_3570929_+	Uncharacterised protein	A0A1S5SA14	Streptococcus_phage	6.9e-94	49.0
VEC69949.1\|3571516_3571723_+	prophage Kil protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
VEC69951.1\|3571798_3572095_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
VEC69953.1\|3572100_3572886_+	bacteriophage recombination protein	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
VEC69955.1\|3572882_3573563_+	exonuclease	Q6H9Z0	Enterobacteria_phage	1.2e-132	100.0
VEC69957.1\|3573559_3573742_+	phage protein	A0A0P0ZD61	Stx2-converting_phage	1.4e-27	96.7
VEC69959.1\|3573714_3573906_+	phage protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
VEC69961.1\|3573916_3574198_+	ybl17	A0A0P0ZE02	Stx2-converting_phage	1.6e-46	97.8
VEC69963.1\|3574517_3574850_+	phage related protein	A5VWB6	Enterobacteria_phage	6.5e-47	93.6
VEC69965.1\|3574827_3575106_+	bacteriophage protein	M1FPC8	Enterobacteria_phage	1.1e-47	96.7
VEC69967.1\|3575304_3576468_+\|integrase	site-specific recombinase, phage integrase family protein	A0A088CD23	Shigella_phage	1.7e-198	86.0
VEC69969.1\|3576802_3577435_+	two component transcriptional regulator, LuxR family	NA	NA	NA	NA
3576482:3576528	attR	NA	NA	NA	NA
VEC69971.1\|3577437_3577953_-	fimbrial protein	NA	NA	NA	NA
VEC69973.1\|3577963_3578941_-	fimbrial protein	NA	NA	NA	NA
VEC69975.1\|3578982_3581592_-	fimbrial outer membrane usher protein	NA	NA	NA	NA
VEC69977.1\|3581622_3582315_-	fimbrial chaperone	NA	NA	NA	NA
VEC69979.1\|3582534_3583077_-	fimbrial-like protein	NA	NA	NA	NA
VEC69981.1\|3583547_3584414_+	5,10-methylene-tetrahydrofolate dehydrogenase	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
VEC69983.1\|3584415_3584628_+	putative RNA-binding protein	NA	NA	NA	NA
VEC69985.1\|3584735_3585257_+	putative membrane-bound metal-dependent hydrolase	NA	NA	NA	NA
VEC69987.1\|3585292_3586678_-\|tRNA	cysteinyl-tRNA synthetase	M1PG92	Moumouvirus	3.9e-45	34.8

DBSCAN-SWA_10

4289441 : 4336307

Shigella_phage(21.05%)

tRNA,integrase,transposase

attL 4296126:4296141|attR 4338935:4338950

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC71230.1\|4289441_4289717_+\|transposase	IS1 transposase	Q71TE9	Escherichia_phage	3.1e-47	100.0
VEC71232.1\|4289845_4290139_+	IS1 protein InsB	U5P0U6	Shigella_phage	1.1e-45	91.8
VEC71234.1\|4290149_4291130_-	deoxyguanosinetriphosphate triphosphohydrolase-like protein	NA	NA	NA	NA
VEC71236.1\|4291280_4292147_-\|transposase	IS3 element transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-51	40.6
VEC71238.1\|4292143_4292449_-\|transposase	putative transposase-related protein	NA	NA	NA	NA
VEC71240.1\|4292590_4292800_-\|transposase	IS1 transposase	U5P0U6	Shigella_phage	2.2e-32	98.6
VEC71242.1\|4292800_4293094_-	IS1 protein InsB	U5P0U6	Shigella_phage	4.2e-42	89.0
VEC71244.1\|4293579_4294101_+	RNA polymerase sigma factor	NA	NA	NA	NA
VEC71246.1\|4294097_4295051_+	iron(III) dicitrate sensor protein	NA	NA	NA	NA
VEC71248.1\|4295137_4297462_+	iron(III) dicitrate TonB-dependent receptor	NA	NA	NA	NA
4296126:4296141	attL	NA	NA	NA	NA
VEC71250.1\|4297506_4298409_+	iron-dicitrate transporter substrate-binding subunit	NA	NA	NA	NA
VEC71252.1\|4298405_4299404_+	iron(III) dicitrate transport system, permease protein	NA	NA	NA	NA
VEC71254.1\|4299400_4300357_+	iron-dicitrate transporter subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1
VEC71256.1\|4300357_4301125_+	iron(III) dicitrate transport system, ATP-binding protein	G3M9Y6	Bacillus_virus	6.4e-13	24.8
VEC71258.1\|4301533_4302685_-\|transposase	IS30 transposase encoded within prophage CP-933T	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
VEC71260.1\|4302977_4303655_+\|transposase	IS911 transposase orfB	Q716C2	Shigella_phage	1.2e-79	61.0
VEC71262.1\|4303647_4304652_-\|transposase	IS66 family transposase orfB	A0A0P0ZEB3	Stx2-converting_phage	7.4e-86	53.8
VEC71264.1\|4304671_4305019_-\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	4.4e-46	75.7
VEC71266.1\|4305018_4305669_-\|transposase	putative transposase subunit	A0A0P0ZCV4	Stx2-converting_phage	3.1e-16	43.6
VEC71268.1\|4305960_4307325_-	transporter protein	NA	NA	NA	NA
VEC71270.1\|4307858_4308941_+	regulatory protein	NA	NA	NA	NA
VEC71272.1\|4308937_4310947_+	regulatory protein	NA	NA	NA	NA
VEC71274.1\|4310936_4312184_+	transport activator	NA	NA	NA	NA
VEC71276.1\|4312528_4313023_+\|transposase	transposase	NA	NA	NA	NA
VEC71278.1\|4314145_4314679_+	PixA protein	NA	NA	NA	NA
VEC71280.1\|4314764_4315352_+	PixH protein	NA	NA	NA	NA
VEC71282.1\|4315472_4317983_+	fimbrial usher protein PixC	NA	NA	NA	NA
VEC71284.1\|4318051_4318783_+	PixD protein	NA	NA	NA	NA
VEC71286.1\|4318819_4319383_+	PixJ protein	NA	NA	NA	NA
VEC71288.1\|4319466_4319985_+	PixF protein	NA	NA	NA	NA
VEC71290.1\|4320007_4321000_+	PixG protein	NA	NA	NA	NA
VEC71292.1\|4321056_4321839_+	inner membrane protein	NA	NA	NA	NA
VEC71294.1\|4321890_4322268_-\|transposase	IS1 transposase	Q71TF0	Escherichia_phage	1.3e-67	100.0
VEC71296.1\|4322312_4322588_-\|transposase	IS1 transposase	Q71TE9	Escherichia_phage	3.1e-47	100.0
VEC71298.1\|4324192_4325458_-\|integrase	phage integrase family site specific recombinase	Q7M297	Enterobacteria_phage	2.2e-79	38.0
VEC71300.1\|4325924_4326944_+	oxidoreductase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	1.4e-44	30.7
VEC71302.1\|4327073_4328576_+	ATPase	A0A248XCZ8	Klebsiella_phage	1.8e-83	44.6
VEC71304.1\|4328694_4329777_-	putative permease	NA	NA	NA	NA
VEC71306.1\|4329776_4330877_-	putative permease	NA	NA	NA	NA
VEC71308.1\|4331143_4332655_+	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
VEC71310.1\|4333008_4333452_+	DNA polymerase III subunit chi	NA	NA	NA	NA
VEC71312.1\|4333451_4336307_+\|tRNA	valyl-tRNA synthetase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
4338935:4338950	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4558346 : 4605694

Burkholderia_virus(30.0%)

tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEC71718.1\|4558346_4559384_-\|tRNA	tRNA-dihydrouridine synthase A	NA	NA	NA	NA
VEC71720.1\|4559744_4560737_-	yjbL	NA	NA	NA	NA
VEC71722.1\|4561054_4561570_+	zinc uptake regulation protein	NA	NA	NA	NA
VEC71723.1\|4561611_4561821_-	putative general stress response protein	NA	NA	NA	NA
VEC71725.1\|4561936_4563262_-	DNA-damage-inducible SOS response protein	NA	NA	NA	NA
VEC71727.1\|4563334_4563943_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
VEC71729.1\|4564052_4564421_-	diacylglycerol kinase	NA	NA	NA	NA
VEC71731.1\|4564591_4567015_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
VEC71733.1\|4567169_4568042_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
VEC71735.1\|4568054_4568552_-	chorismate lyase	NA	NA	NA	NA
VEC71737.1\|4568774_4570103_-	putative type III effector protein	NA	NA	NA	NA
VEC71739.1\|4570160_4570355_-	putative type III effector protein	NA	NA	NA	NA
VEC71741.1\|4570456_4570609_+	Uncharacterised protein	NA	NA	NA	NA
VEC71743.1\|4570583_4571504_-	maltose regulon periplasmic protein	NA	NA	NA	NA
VEC71745.1\|4571746_4573087_-	maltoporin (maltose-inducible porin)	NA	NA	NA	NA
VEC71747.1\|4573158_4574274_-	maltose/maltodextrin transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	4.3e-18	31.7
VEC71749.1\|4574450_4574546_+	sugar ABC transporter	NA	NA	NA	NA
VEC71751.1\|4574638_4575829_+	maltose transport system, substrate-binding protein	NA	NA	NA	NA
VEC71753.1\|4575982_4577527_+	maltose transporter membrane protein	NA	NA	NA	NA
VEC71755.1\|4577541_4578432_+	maltose transporter permease	NA	NA	NA	NA
VEC71757.1\|4578803_4580279_+	D-xylose transporter XylE	NA	NA	NA	NA
VEC71759.1\|4580322_4580733_-	protein psie	NA	NA	NA	NA
VEC71761.1\|4581327_4583424_-	putative lipoprotein	NA	NA	NA	NA
VEC71763.1\|4583423_4584161_-	group 4 capsule (G4C) polysaccharide, YmcB	NA	NA	NA	NA
VEC71765.1\|4584157_4584796_-	lipoprotein yjbF	NA	NA	NA	NA
VEC71767.1\|4584909_4585152_-	protein	NA	NA	NA	NA
VEC71769.1\|4585650_4587300_-	glucosephosphate isomerase	NA	NA	NA	NA
VEC71771.1\|4587824_4589174_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA
VEC71773.1\|4589235_4589577_-	putative transcriptional regulator	Q6QIE8	Burkholderia_phage	2.2e-21	48.1
VEC71775.1\|4590113_4590401_+	putative inner membrane protein	Q6QIC8	Burkholderia_phage	1.8e-16	48.6
VEC71777.1\|4590403_4591009_+	soluble lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	6.7e-58	58.2
VEC71779.1\|4591021_4591336_+	putative inner membrane protein	Q5ZQY8	Pseudomonas_phage	9.2e-19	43.2
VEC71781.1\|4591482_4591938_+	phage-related protein Gp37-like protein	NA	NA	NA	NA
VEC71783.1\|4591934_4592132_+	phage-like protein	NA	NA	NA	NA
VEC71785.1\|4592121_4593546_+\|tail	putative phage tail sheath protein	A4JWK5	Burkholderia_virus	1.9e-191	70.4
VEC71787.1\|4593545_4594070_+\|tail	phage tail core protein	A4JWK6	Burkholderia_virus	1.2e-68	69.0
VEC71789.1\|4594120_4594438_+	putative phage-like protein	NA	NA	NA	NA
VEC71791.1\|4594627_4597003_+\|tail	putative phage tail protein	A4JWL0	Burkholderia_virus	1.1e-58	25.5
VEC71793.1\|4597002_4597956_+	putative phage P2 GpU family protein	A4JWL1	Burkholderia_virus	5.6e-35	50.8
VEC71795.1\|4597955_4598165_+\|tail	putative phage tail protein	A4JWL2	Burkholderia_virus	3.7e-16	58.8
VEC71797.1\|4598152_4599193_+	putative control protein for phage late genes expression	A4JWL3	Burkholderia_virus	4.4e-73	44.2
VEC71799.1\|4599202_4599904_+\|plate	putative phage baseplate component	A0A067ZIM2	Vibrio_phage	6.4e-12	36.3
VEC71801.1\|4600002_4600362_+\|plate	putative phage baseplate protein	Q6QIA0	Burkholderia_phage	4.7e-35	64.2
VEC71803.1\|4600352_4601468_+\|plate	putative phage baseplate protein	Q6QI99	Burkholderia_phage	3.4e-100	51.7
VEC71805.1\|4601460_4601820_+\|tail	phage tail protein	Q6QI98	Burkholderia_phage	5.1e-21	52.1
VEC71807.1\|4602178_4603759_+\|tail	putative side tail phage protein	A0A0M3ULH6	Salmonella_phage	2.0e-85	41.1
VEC71809.1\|4603755_4604463_+\|tail	putative phage tail fiber assembly protein	A0A0E3JQ06	Enterobacteria_phage	9.1e-14	43.5
VEC71811.1\|4604459_4604915_+	Uncharacterised protein	F6MIM0	Haemophilus_phage	3.0e-26	43.3
VEC71813.1\|4604929_4605694_-	nucleotidyltransferase	Q8SCS5	Pseudomonas_phage	9.7e-46	44.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134228

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection