CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134244	Staphylococcus warneri strain NCTC7291 genome assembly, chromosome: 1	2 crisprs	csa3,WYL,DEDDh,cas3,DinG	1	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134244_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134244_1

514926-515012

Orphan

Consensus_repeat	Method
AAGTACTTCCATTTTAATGGTTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134244_1

>merge|LR134244|1|514926-515012|CRISPRCasFinder
AAGTACTTCCATTTTAATGGTTAGTACTTCTTACGCAGTAGTGAAAGCTACTGTGATCCTTAAAAGTACTTCCATTTTAATGGTTAG

>LR134244|1|1|514926-515012|CRISPRCasFinder
AAGTACTTCCATTTTAATGGTTAG	TACTTCTTACGCAGTAGTGAAAGCTACTGTGATCCTTAA
AAGTACTTCCATTTTAATGGTTAG

Protein	Signature genes	Signature genes Name	Protein_function
LR134244.1\|VED31046.1\|518540_518906_+\|exported-protein	unknown	unknown	gnl\|CDD\|371476
LR134244.1\|VED31039.1\|512710_513163_+\|nreA-protein	unknown	unknown	gnl\|CDD\|379056
LR134244.1\|VED31047.1\|519155_520433_+\|Proton/glutamate-symport-protein-@-Sodium/glutamate-symport-protein	unknown	unknown	gnl\|CDD\|183075
LR134244.1\|VED31033.1\|504848_505163_+\|assimilatory-nitrite-reductase	unknown	unknown	gnl\|CDD\|239606
LR134244.1\|VED31036.1\|509897_511451_+\|nitrate-reductase-Z-subunit-beta	unknown	unknown	gnl\|CDD\|224063
LR134244.1\|VED31034.1\|505153_506080_+\|uroporphyrin-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|381169
LR134244.1\|VED31042.1\|515311_516463_+\|nitrite-transport-protein	unknown	unknown	gnl\|CDD\|225133
LR134244.1\|VED31043.1\|516516_516933_-\|putative-small-heat-shock-protein	unknown	unknown	gnl\|CDD\|223149
LR134244.1\|VED31041.1\|514226_514880_+\|Two-component-response-regulator	unknown	unknown	gnl\|CDD\|225107
LR134244.1\|VED31040.1\|513172_514204_+\|Oxygen-sensor-histidine-kinase-NreB	unknown	unknown	gnl\|CDD\|226951
LR134244.1\|VED31051.1\|524965_525337_-\|type-II-DNA-modification-enzyme	unknown	unknown	gnl\|CDD\|377982
LR134244.1\|VED31032.1\|502440_504846_+\|nitrite-reductase	unknown	unknown	gnl\|CDD\|224171
LR134244.1\|VED31044.1\|517171_517618_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
LR134244.1\|VED31035.1\|506260_509908_+\|nitrate-reductase-Z-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
LR134244.1\|VED31049.1\|521428_521851_-\|general-stress-protein-26	unknown	unknown	gnl\|CDD\|226389
LR134244.1\|VED31038.1\|512011_512689_+\|nitrate-reductase-gamma-chain	unknown	unknown	gnl\|CDD\|376889
LR134244.1\|VED31045.1\|517782_518412_+\|NAD(P)H-flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|380314
LR134244.1\|VED31037.1\|511443_512019_+\|Respiratory-nitrate-reductase-delta-chain	unknown	unknown	gnl\|CDD\|225091
LR134244.1\|VED31050.1\|521927_524030_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
LR134244.1\|VED31048.1\|520721_521066_-\|exported-protein	unknown	unknown	gnl\|CDD\|374445

Protein	Function_ID	Function_description	E-value
LR134244.1\|VED31046.1\|518540_518906_+\|exported-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	1.20166e-10
LR134244.1\|VED31039.1\|512710_513163_+\|nreA-protein	gnl\|CDD\|379056	pfam13185, GAF_2, GAF domain.	1.14511e-05
LR134244.1\|VED31047.1\|519155_520433_+\|Proton/glutamate-symport-protein-@-Sodium/glutamate-symport-protein	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	4.56813e-168
LR134244.1\|VED31033.1\|504848_505163_+\|assimilatory-nitrite-reductase	gnl\|CDD\|239606	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.	9.83242e-54
LR134244.1\|VED31036.1\|509897_511451_+\|nitrate-reductase-Z-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
LR134244.1\|VED31034.1\|505153_506080_+\|uroporphyrin-III-C-methyltransferase	gnl\|CDD\|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	1.36101e-107
LR134244.1\|VED31042.1\|515311_516463_+\|nitrite-transport-protein	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	2.58924e-113
LR134244.1\|VED31043.1\|516516_516933_-\|putative-small-heat-shock-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	1.28361e-24
LR134244.1\|VED31041.1\|514226_514880_+\|Two-component-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.24849e-78
LR134244.1\|VED31040.1\|513172_514204_+\|Oxygen-sensor-histidine-kinase-NreB	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.92804e-62
LR134244.1\|VED31051.1\|524965_525337_-\|type-II-DNA-modification-enzyme	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.09318e-21
LR134244.1\|VED31032.1\|502440_504846_+\|nitrite-reductase	gnl\|CDD\|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	0
LR134244.1\|VED31044.1\|517171_517618_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.30635e-17
LR134244.1\|VED31035.1\|506260_509908_+\|nitrate-reductase-Z-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
LR134244.1\|VED31049.1\|521428_521851_-\|general-stress-protein-26	gnl\|CDD\|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	3.62764e-44
LR134244.1\|VED31038.1\|512011_512689_+\|nitrate-reductase-gamma-chain	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	2.02622e-111
LR134244.1\|VED31045.1\|517782_518412_+\|NAD(P)H-flavin-oxidoreductase	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	2.50759e-56
LR134244.1\|VED31037.1\|511443_512019_+\|Respiratory-nitrate-reductase-delta-chain	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	9.15113e-50
LR134244.1\|VED31050.1\|521927_524030_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.24883e-20
LR134244.1\|VED31048.1\|520721_521066_-\|exported-protein	gnl\|CDD\|374445	pfam16230, DUF4889, Domain of unknown function (DUF4889). This family consists of uncharacterized proteins around 110 residues in length and is mainly found in various Staphylococcus aureus species. The function of this family is unknown.	3.95214e-24

>LR134244.1|VED31041.1|514226_514880_+|Two-component-response-regulator
MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVMEFKPDVLLMDLSMPPGESGLIATSKIHESFPETKILILTMYDDEEYLFHVLRNGAKGYILKNAPDEQLLLAIRTVYNGETYVDMKLTTSLVNEFVNSSNQEYTDTSDPFKVLSKRELEILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMNKLELKSKPELVEYAMKKKLLEF
>LR134244.1|VED31040.1|513172_514204_+|Oxygen-sensor-histidine-kinase-NreB
MTVNNEQLEVLLRRYFESTNEKIVFVNNNGKVIAMNEAAKEVISEEENYSAMTNAICRRCEGYTNEYDLQSCKDCFLDVEQPHHSQFQVFMKTKNRKIAPFTASYITIDPVKGINAFTLQDVAPQIERQEKMNQRRMMRKTISAQENERKRISRELHDSVIQEMLNIDVQLRLLKYQQDKEKILDDVKNIEGLMSQLVDDVRHLSVELRPASLDDLGLEAAFKSYFKQFEENYGMQINYVSNIVNHRFDSEVETVVYRVVQEAVYNALKYAGVSEVEVTIQQNELTLIAEIIDRGQGFDPSSKPRGSGLGLYGMKERSELVEGNLNIETHIGKGTIITLEVPL
>LR134244.1|VED31039.1|512710_513163_+|nreA-protein
MMPDSMFESQNFQENIDRIRLEQGFDFAALAFYESASTFSPIKWQYVSGNKNDRYKLIILRKGRGLAGNVMKTGKRMVIANVDMALTPDEKVKFPILLSENLTAVIAIPLWYQQQVYGVMLFGQRNHKPLPINVYDIDIYEQLGIFNEEI
>LR134244.1|VED31038.1|512011_512689_+|nitrate-reductase-gamma-chain
MINQFLWVIYPYLCIAIFIIGHIARFKYDQFSWTAKSSELIEKKRLKWGSLLFHLGVIPVFFGHVVGLVIPKYWMDSLGVSEHMYHFGAVYIGSIFGIMTLIGMLLLTARRITIKNVRRLSSFSDIFVNILLLIIIFMGCYSTIVTNMMHIEFNYRETISVWFRQLFMFKPHADLMTNVPLQFKLHMLLGFTIFACWPFTRLVHVWSVPLSYTNRRYIIYRKNKL
>LR134244.1|VED31037.1|511443_512019_+|Respiratory-nitrate-reductase-delta-chain
MINFDNLYRYQDSLGYIAMQLCFPEKKTFNENIFNEVIDPSHPGYQDLLAFREQMMQYTLSEIQQIYTDTFDFSKKAPLYMTYNQFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDYLPLMLQFLQTIEWRGDERAEENIQLVIMIIEDGTYVMANELGKLNHPYGYVIQALRKTLKLCLQVPEGVALHD
>LR134244.1|VED31036.1|509897_511451_+|nitrate-reductase-Z-subunit-beta
MKIKAQIAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNVETKPGTGYPKRWEDQEHYKGGWVLNRKGKLQLKSGSKWSKIALGKIFYNPDMPLIQDYYEPWNYNYEHLTTAKAGQHSPVARAYSVISGENMDIEWGPNWEDDLAGGHVTGPKDPNIQKIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQDACRGWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYDADRVEEMASTENEKELYEKQLELFLDPFDEAIIAQAEKDGINHEWIEAAQQSPIYKLAIEYKLAFPLHPEYRTMPMVWYCPPLSPIMSYFEGKNSEQNPDMIFPAIEEMRLPIEYLANMFTAGATKPVKQALQKMAMMRSYMRAQVTQKDFDVERLTQLGLTERQTKDMYRLLGLAKYEERFVIPTTHKETYLDTYHAQGSQGYGGENFGVNCEGCGVAVATDKSGQDIYNERFYGGIFRD
>LR134244.1|VED31035.1|506260_509908_+|nitrate-reductase-Z-subunit-alpha
MGKFGLNFFKPTEKFNGNWSVLESKSREWEKMYRERWSHDKEVRTTHGVNCTGSCSWKVFVKNGVITWENQQTDHPSCGPDMPEYEPRGCPRGASFSWYEYSPLRVKYPYIRGQLLELWQEALEENHGNKIAAWASIVEDEEKAKRYKQARGMGGHVRSNWKDVTDIIAAQLLYTIKKDGPDRIAGFTPIPAMSMVSYAAGARFINLLGGEMLSFYDWYADLPPASPQIWGEQTDVPESSDWYNAAYMIMWGSNVPLTRTPDAHFMTEVRYKGTKVISISPDYAENVKFADNWLAPNPGTDAAVAQAMTHVILQEYYINNPNSRFINYAKQYTDMPFILMLDQDENGLKAGRFLRASDLGQDTTNGEWKPVLFDNLSNQLVVPNGTMGQRWEDGKQWNLKLEDEAGNDIQPSLSMDESDFELQQIQFPYFDSNGDGVFERPIPTKKIKLANGDERYITTVYDLMISQYGIKRFNHELEATGYDDAHSKYTPAWQENITGIKSSLVIQVAKEFAQNAIDTEGRSMIIMGAGINHWFNSDTIYRSILNLVMLCGCQGVNGGGWAHYVGQEKCRPIEGWNTIAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDKLKSPLAKHIKHQHPADYNVTAAKLGWLPSYPQFNKNSLLFAEEAKENGDDSNEAILQRAINEVKTKETKFAVEDPDLRKNHPKTLFVWRSNLISSSAKGQEYFMKHLLGTKSGLLASPNEDDKPDEIQWREETTGKLDLLVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPYVHPFNPAIDPLWESRSDWDIYKTLAKAVSEMAKDYLPGTYKDVVTTPLGIVKDWSKGEIDAIPGKTMPNFTIVERDYTLIYDKYVSVGPKLETDKVGAHGVSFSVKEQYEELKSMLGTWNDKDPKSIKNDKPRIHSARNVADAMLNLSSATNGKLSQKSYQDLEKQTGMTLTDISSERASEKITFLNIGSQPREVIPTAVFPGSNKNGRRYSPFTTNIERLVPFRTLTGRQSYYIDHEIFQQFGESLPIYKPTLPPMVFGTKDKQIKGGTDTLILRYLTPHGKWNIHSMYQDNKHMLTLFRGGPTVWISDEDAVEHDIQDNDWLEVYNRNGVVTARAVISHRMPKGTMFMYHAQDKHIQTPGSEITDTRGGSHNAPTRIHLKPTQLIGGYAQISYHFNYYGPIGNQRDVYVAVRKMKEVNWLED
>LR134244.1|VED31034.1|505153_506080_+|uroporphyrin-III-C-methyltransferase
MPLNRYGTVYLVGAGPGDPNLLTKRAQRLIENADIILYDRLVNPFILQYAKPDIEIIDVGKKPYTKHIQQEAINQKMIEAASKHHHVVRLKGGDPAIFGRVQEEVEALVELNINFEIVPGITSASAAAQSMNLGLTMRSIAKNVTFSTGHFKDSKDNDIDISTLINKGTLAVYMGVKRLPRIISQIRQYTSYDYPIAIVFRASLFDEQVLTGNISNIEQKLNQYKVEGLPGICIIGDIISYSQPQIKTKNKEKIYIVKGDRNQALEKCELLYEQGYGCMIEVDETYHYSQQALYKSVLKQYTHQFIEL
>LR134244.1|VED31033.1|504848_505163_+|assimilatory-nitrite-reductase
MKHMEKIKVSRIDELTPLIGKKVFVNDKEIGLFLTNEGEIFAVNNICPHKEGPLSEGIVSGNYVYCPLHDQKIDLKTGDVQEPDTGCVETYPVEVVDGDIFICL
>LR134244.1|VED31032.1|502440_504846_+|nitrite-reductase
MTKNKLVMIGNGMAGLRTIEEILDRDPQRFEITIIGKEAYPNYNRIMLSNILQNKMTVEETIMNSYDWYAEHDIKLVNNDPVTILDREKKTVLTESGQSFEYDQCIIATGSKAFVLPIPGSDLPSVIGWRTIDDTKRMMEIAQTKHKAIVIGGGLLGLECARGLLDQGMEVTVVHLAEWLMEMQLDRKAGQMLKNDLEQQGMRFELQANTQEILGHEDVESVRLADGRVLEADLVVMAVGIRPYTEVAKAAGLDVNRGIIVNEFMQTNDPNIFAVGECAECEGKVYGLVAPLYEQGIVLADYLTNKETNGYHGSTTFTSLKVSGCDLYSAGIIEETDDIHGIEIFNSIDNNYKKVFLKDGEVVGAVLYGNTDDGSRFYNMMKKHESIEDYTLVSLLTKGGEAANVSIEDMADDETICGCNGVNKGTIVEAITKNGLTSVAEVTKMTKAGNSCGKCKGQIADILQYALGDDFIASKPTGICACTDLSRDQIVTQIRAKGLKTSKEVRHVLNFKDKNGCPKCRPAINYYLNMIYPYEHKDEKESRFANERYHANIQNDGTFSVIPQMRGGVTDADQLIRLGEVAKKYNVPLVKVTGSQRVGLYGLKKEELPSVWEDLGMRSASAYGKKTRSVKSCVGKEFCRFGTQYTTQLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGVKDFGVISVENGFQLYIGGNGGTEVTKGQLLTTVETEDEVIRICGALMQYYRETGIYAERTAPWLERLGFENVKEVLLDPERQQALFDRVMEAKQAIQEEPWQAIVNDKASQKIFEVERV
>LR134244.1|VED31042.1|515311_516463_+|nitrite-transport-protein
MDKTKGGFQLTLQTLSLVVGFMAWSIISPLMPFISQDIKISAGQLSIILAIPVILGSILRVPFGYLTNIVGAKWVFFCSFIVLLFPIYFLGQAQSPKMMMISGFFLGVGGAIFSVGVTSIPKYFPKDKVGLANGIYGMGNIGTAISSFLAPPIAGIIGWQATVRSYLVIIAIFAVLMFIFGDNREPKVKVPLIAQMKILFKNYKLYYTSLWYFITFGAFVAFGLFLPNYLVQHFGIDKVDAGIRSGIFIALATFLRPVGGILGDKLNAVKVLMVDFVIMIIGALILGFSNHIALFTIGCLMISVCAGIGNGLIFKLVPSYFAKEAGSANGIVSMMGGLGGFFPPLVITYVTGMTGSSHLAFIFLAVFGLIALITMVHLNKKEA
>LR134244.1|VED31043.1|516516_516933_-|putative-small-heat-shock-protein
MPSNDFFNNSFLKNDPTDMFRDLGKQVFNQFSTQAFPANLYNESDHYLIEAELAGVKKENISLTFDHHTLTIKANKYLEPHNGQAQLNERSNGELVRRFEFEDVDKDLIKATFEDGVLNIRLPKQQQESEDATTISIL
>LR134244.1|VED31044.1|517171_517618_-|MarR-family-transcriptional-regulator
MYVENSYLSKQLCFLFYVSSKEIIKKYSSYLKEYELTYTGYIVLMAIEEDEKLNIKTLGDRVFLDSGTLTPLLKKLEKKNYVVRTREEKDERNLQISLTDHGKSIKKPLSEVSLKVFGEFDIDVNEAKELINHLQMFVSKNFDKSTEK
>LR134244.1|VED31045.1|517782_518412_+|NAD(P)H-flavin-oxidoreductase
MERISKFDDVLKGRKSVKVFDTEYKISHEEMDEMIQKATKAPSSVNMQPWRIMVVDSDEGKEKILPSFGMNSRQVNTSSAMIIVFGDLKNYEKAEQIYSDAVSKKHMTEEIKDKMLSWVLPHYKGLSREGMKDIVNIDSSLMAMQFMLVAKSHGYDTNPIGGFDKANIADVLGLDSERFVPVVAIAVGKGAQEAHDSVRLPLEDVRQYL
>LR134244.1|VED31046.1|518540_518906_+|exported-protein
MSRKQKLIRIAIILIISLVLAFAFFFALKTYQGHKNIEMVDSYLKEHHLKDKIKKEETLYSAKKGVYYKEVIYKDEPKVTYVIQPISTRKGIFAEGFDTETKKSLKSAKHNYFNKNYKPSN
>LR134244.1|VED31047.1|519155_520433_+|Proton/glutamate-symport-protein-@-Sodium/glutamate-symport-protein
MALFKRKISLPVQVLIALVLGVVVGLILYGNEEAANYIKPFGDVFLNLIKMIVIPVVFCSLALSISNVGESKTVGRYGWKTILYFEIITTIAIGLGIIFGNLFKPGSGLDPSKLPKGDISKYQSSAHAAEQSTYGNHFIDTIVNIVPTNFFEALTKGELLPIIFFAVFFGLGLAAIGEKAEPVKSFLNGTLEAVFWMINKILKLAPLGVFAFICTTIITFGASALLPLLKLVLVVVFAMVFFVVVVLGIVARMCGISIFSIMKILKSEILLAFSTSSSEAVLPVMMKKMEKFGSPKEITSFVIPIGYTFNLDGSALYQSIAALFVAQMYGMHLTLTEQIVLMLTLMLTSKGMAAVPGTSIVVLLTTLGAMGLPAQGLALIIGVDRLLDMVRTVVNVMGNALSTVVIAKWENLYDKKQGQEYLKSL
>LR134244.1|VED31048.1|520721_521066_-|exported-protein
MKSKKGLGFGLIAIMLIVCIVLVVVMMAGGKKETYYGVMKNDTTIDKMISEKDEKIEKNVKLPSDAKVSVKKEDFVMITKNEKTGKIAKVKKVDHDDVPHGLMTQIHDMGHMHM
>LR134244.1|VED31049.1|521428_521851_-|general-stress-protein-26
MDNQKATEAIEKVLDHSKVGVLSTAYNNKPNSRYMVFYNDELTLYTKTNVNSIKVEEIEDNPYAYILLGYNETTNHSFVEIDATIEVVKDQKVIDWLWETQDKSFFDSNKDPELCVLKVTPKSIKLMNDKDLDTPFTIEL
>LR134244.1|VED31050.1|521927_524030_-|AraC-family-transcriptional-regulator
MSCHLTLSTQHQTQPCRNINQIIILFSLSHELSIKINGERKDLDAHIAIINHGDIYEIENATHLVQLSIPIFYFYIEDTSFFQCYFDRHLLQSSDYIKTLLLQLLQQDSKNNIDQQVCPKIIQTLYKEAVVKLEDDYIPNMAVNYPLFANCLQFLEEHLSQPISLKDVATHSSISESYCSNLFNRYLNMNFKDYFTSLKLCHSIQLLMTSHLSINAISEISGFTSHTNFTNQFKNYLQFSPKQYRTYINQIDTMPQLNIGDYDHAAFLPLIEKFNFNDQLTTEITKIDIEHFDPKDHSKASKAFIRLDNFNELFHFTFNDYFDIDFSFLPEPVILINDIKDLTTNQINYHLLYRCFDKLFERHIGLAMTIKSKVDFKAVNQFILTFLQGHTDYQLNKKTVKLMLIFDSATMTIHDIHLCHLKIKNKNRDIKYGVTIDGLLHQHQTLDKTYDILRRLHFDYYLLDIENIETTSLLINKSKTYNRTTSHFDNYKQFIIDSGIESTRFVYDYLSLKCFKYTNNGVNPLQLADLVCHIIALLRYGGGISYQLIATGSIYISLFNEFGNALPLIHIYKMAHAFVDEPIQISNNYIMSRKDGNYHFILFNKINDRYLSDTHLEFILKNNLKANSLITVQTLNNEHGTIDNLLPQNRQQLFLDKEMIEQLDRSNHPKTELSLLELDNQDIKIILKHDEVKYICIKPN
>LR134244.1|VED31051.1|524965_525337_-|type-II-DNA-modification-enzyme
MKERGRIEQLWREEKYRVLLHSQKQYDAIREKLKTQTSYEEIRMMIEHAITIDPSQGSVINAYDHMWGYFKKLATDEEKQKSQTLKQQFVNHEVSIHDLMSFLNVLANKYEVHYIQQSTVLKE

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Crispr_ID: LR134244_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134244_2

2211770-2211864

Orphan

Consensus_repeat	Method
TGCATTTTAATGCTTAGAGTTTTTTATGCATGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134244_2

>merge|LR134244|2|2211770-2211864|CRISPRCasFinder
TGCATTTTAATGCTTAGAGTTTTTTATGCATGAGCTTTGCTCAGGCGCTCCTTAATCTAATGCATTTTAATGCTTAGAGTTTCTTATGCATGAGC

>LR134244|2|2|2211770-2211864|CRISPRCasFinder
TGCATTTTAATGCTTAGAGTTTTTTATGCATGAGC	TTTGCTCAGGCGCTCCTTAATCTAA
TGCATTTTAATGCTTAGAGTTTCTTATGCATGAGC

Protein	Signature genes	Signature genes Name	Protein_function
LR134244.1\|VED33439.1\|2211034_2211535_-\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
LR134244.1\|VED33449.1\|2214635_2215217_-\|RNA-polymerase-sigma-factor-sigW	unknown	unknown	gnl\|CDD\|274357
LR134244.1\|VED33433.1\|2206089_2209641_-\|DNA-directed-RNA-polymerase-beta-subunit	unknown	unknown	gnl\|CDD\|234749
LR134244.1\|VED33445.1\|2213574_2214123_-\|Transcription-antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
LR134244.1\|VED33459.1\|2218340_2218982_-\|Serine-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
LR134244.1\|VED33431.1\|2202330_2205954_-\|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl\|CDD\|234794
LR134244.1\|VED33421.1\|2197259_2198444_-\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
LR134244.1\|VED33447.1\|2214133_2214316_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
LR134244.1\|VED33441.1\|2212059_2212755_-\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
LR134244.1\|VED33451.1\|2215287_2215815_-\|yacP-like-NYN-domain-protein	unknown	unknown	gnl\|CDD\|226213
LR134244.1\|VED33429.1\|2201921_2202182_-\|putative-ribosomal-protein-L7Ae-like-protein	unknown	unknown	gnl\|CDD\|184172
LR134244.1\|VED33425.1\|2200876_2201347_-\|30S-ribosomalprotein-S7p-(S5e)	unknown	unknown	gnl\|CDD\|235398
LR134244.1\|VED33435.1\|2209858_2210467_-\|methyltransferase-domain-protein	unknown	unknown	gnl\|CDD\|225370
LR134244.1\|VED33423.1\|2198675_2200757_-\|protein-translation-elongation-factor-G-(EF-G)	unknown	unknown	gnl\|CDD\|234569
LR134244.1\|VED33455.1\|2216565_2216964_-\|Small-protein;-cysteinyl-tRNA-synthetase-like-protein	unknown	unknown	gnl\|CDD\|224850
LR134244.1\|VED33443.1\|2212971_2213394_-\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
LR134244.1\|VED33427.1\|2201418_2201832_-\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
LR134244.1\|VED33453.1\|2215814_2216561_-\|TrmH-family-tRNA/rRNA-methyltransferase-YacO	unknown	unknown	gnl\|CDD\|223640
LR134244.1\|VED33437.1\|2210626_2210995_-\|50S-ribosomalprotein-L7/L12-(L23e)	unknown	unknown	gnl\|CDD\|234671
LR134244.1\|VED33457.1\|2216956_2218357_-\|cysteinyl-tRNA-ligase	unknown	unknown	gnl\|CDD\|234705

Protein	Function_ID	Function_description	E-value
LR134244.1\|VED33439.1\|2211034_2211535_-\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	9.07084e-72
LR134244.1\|VED33449.1\|2214635_2215217_-\|RNA-polymerase-sigma-factor-sigW	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.60808e-21
LR134244.1\|VED33433.1\|2206089_2209641_-\|DNA-directed-RNA-polymerase-beta-subunit	gnl\|CDD\|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
LR134244.1\|VED33445.1\|2213574_2214123_-\|Transcription-antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	2.09504e-86
LR134244.1\|VED33459.1\|2218340_2218982_-\|Serine-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	1.50525e-93
LR134244.1\|VED33431.1\|2202330_2205954_-\|DNA-directed-RNA-polymerase-subunit-beta'	gnl\|CDD\|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
LR134244.1\|VED33421.1\|2197259_2198444_-\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
LR134244.1\|VED33447.1\|2214133_2214316_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	1.16587e-12
LR134244.1\|VED33441.1\|2212059_2212755_-\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.1535e-150
LR134244.1\|VED33451.1\|2215287_2215815_-\|yacP-like-NYN-domain-protein	gnl\|CDD\|226213	COG3688, COG3688, Predicted RNA-binding protein containing a PIN domain [General function prediction only].	6.72894e-80
LR134244.1\|VED33429.1\|2201921_2202182_-\|putative-ribosomal-protein-L7Ae-like-protein	gnl\|CDD\|184172	PRK13600, PRK13600, putative ribosomal protein L7Ae-like; Provisional.	1.88201e-44
LR134244.1\|VED33425.1\|2200876_2201347_-\|30S-ribosomalprotein-S7p-(S5e)	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	1.88667e-112
LR134244.1\|VED33435.1\|2209858_2210467_-\|methyltransferase-domain-protein	gnl\|CDD\|225370	COG2813, RsmC, 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].	3.68116e-77
LR134244.1\|VED33423.1\|2198675_2200757_-\|protein-translation-elongation-factor-G-(EF-G)	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
LR134244.1\|VED33455.1\|2216565_2216964_-\|Small-protein;-cysteinyl-tRNA-synthetase-like-protein	gnl\|CDD\|224850	COG1939, COG1939, Ribonuclease III family protein [Replication, recombination, and repair].	4.88708e-57
LR134244.1\|VED33443.1\|2212971_2213394_-\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	1.17994e-97
LR134244.1\|VED33427.1\|2201418_2201832_-\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	7.89944e-85
LR134244.1\|VED33453.1\|2215814_2216561_-\|TrmH-family-tRNA/rRNA-methyltransferase-YacO	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	6.23816e-88
LR134244.1\|VED33437.1\|2210626_2210995_-\|50S-ribosomalprotein-L7/L12-(L23e)	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	4.60101e-48
LR134244.1\|VED33457.1\|2216956_2218357_-\|cysteinyl-tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0

>LR134244.1|VED33439.1|2211034_2211535_-|50S-ribosomal-protein-L10
MSAIIEAKKQLVDTIADQLKNSVSTVIVDYRGLTVAEVTELRKQLREAGVEYKVYKNTMVRRAAEKAGIEGLDEFLTGPTAIATSTEDVVAPAKVIAGFAKEHEALEVKSGVMEGNVISAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAVGEQKEESAE
>LR134244.1|VED33437.1|2210626_2210995_-|50S-ribosomalprotein-L7/L12-(L23e)
MANQEQIIEAIKEMSVLELNDLVKTIEEEFGVTAAAPVAAAGAAGGGEAAAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDGAPKVIKEAMPKEDAEKLKEQLEEVGATVELK
>LR134244.1|VED33435.1|2209858_2210467_-|methyltransferase-domain-protein
MSHYYDENPEVKSDEKQITYECYQHSINLITDNGVFSRDKVDFGSDLLIQTFLKANPPGPSKTIADVGCGYGPIGLMIAKVSPHHHITMLDVNRRALELAKKNKKKNHIENADIFESDGMTQVDNNQFDFVLTNPPIRTGKTVVHRIFEEAYQKLKSNGELFVVIQKKQGMPSAKKKMDELFNNVEVVNKSKGYYILKSVKA
>LR134244.1|VED33433.1|2206089_2209641_-|DNA-directed-RNA-polymerase-beta-subunit
MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKETGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKLDKNGRENYDATIIPNRGAWLEYETDAKDVVYVRIDRTRKLPLTVLLRALGFSSDQEIVDLLGDSEYLRNTLEKDGTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKANKKLHLKHRLFNQKLAEPIVNSETGEIVVEEGTVLDRRKLDEIMDVLEANANSEVFELEGTVIDEPVEIQSIKVYVPNDDEGRTTTVIGNALPDSEVKCITPADIIASMSYFFNLLSGIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDLDTNAITDQIDYLTADEEDSYVVAQANSRLDENGRFIDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITANHRGRVEHVESNEILVRRLVEQDGQEYEGELDRYPLAKFKRSNSGTCYNQRPIVAAGDIVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSESALKNLDERGIVYVGAEVKDGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDTVGRVKTYESIVKGENISRPSVPESFRVLMKELQSLGLDVKVMDEQDNEIEMADIEDEDVTERKVDLQQKDAPESQKETTD
>LR134244.1|VED33431.1|2202330_2205954_-|DNA-directed-RNA-polymerase-subunit-beta'
MIDVNNFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEGIRDLLSEIDLDEELKILRDELESATGQRLTRAIKRLEVVESFRNSGNDPAWMILDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGRRGRSVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIVEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERTDAVNTGTIYNDTNEVLKAYANGYVHLHTRIGVHASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQTNLEGTTPDKYFVDPTELGEGGLKEFFETKELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGITVGVSDIVVLPDKKDILDEHEKLVERVTKQFNRGLITEEERYNAVVEIWTDAKDQIQGELMQSLEKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEVIIRPDELITAEIAKKITDAGIEQMYIRSAFTCNTRHGVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGENEIRSYLASGTSRLKVEVGQSVERGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSLVDIHNFTDANRDAFKERKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVQYDKNVALVASSEEEVEVTE
>LR134244.1|VED33429.1|2201921_2202182_-|putative-ribosomal-protein-L7Ae-like-protein
MSNEKVARFNKQQYVVGLKETLKALNKDQVTSLIIARDVEVHLMTRVLSQINQKNIPYTLFSSKKELGEYVGINVNATIVAILNEN
>LR134244.1|VED33427.1|2201418_2201832_-|30S-ribosomal-protein-S12
MPTINQLVRKPRQSKSKKSDSPALNRGFNSKKKQFTELNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN
>LR134244.1|VED33425.1|2200876_2201347_-|30S-ribosomalprotein-S7p-(S5e)
MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEERSGRQAIEVFEEAIENIMPVLEVKARRVGGSNYQVPVEVRPERRSTLGLRWLVNYARLRGEKTMEERLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
>LR134244.1|VED33423.1|2198675_2200757_-|protein-translation-elongation-factor-G-(EF-G)
MAREFSLKNTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSAATTAAWDGHRVNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQATTYGVPRIVFINKMDKLGANFEYSVSTLHDRLQANAAPIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIDEIEIPEDHKERAEEARSTLIEAVAETNDELMEKYLGDEEISVEELKSAIRQATTDVEFYPVLCGTAFKNKGVQLMLNAVIDYLPSPLDVKPIVGHRANDPEEEVIAKPDDSAEFAALAFKVMTDPYVGKLTFFRVYSGTLSSGSYVKNSSKDKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKETGTGDTLCGEKNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVIIGGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKQSAQVQGKFSRQSGGRGQYGDVHIEFTPNETGGGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKLFDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVTARRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSISEEIIKKNKGE
>LR134244.1|VED33421.1|2197259_2198444_-|elongation-factor-Tu
MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDTVAQSYDMIDNAPEEKERGITINTAHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDEKYEEKILELMQAVDDYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVQLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIHE
>LR134244.1|VED33441.1|2212059_2212755_-|50S-ribosomal-protein-L1
MAKKGKKYQEAANKVDRTQYYSVEEAIKLAKETSIANFDASVEVAFRLGIDTRKNDQQIRGAVVLPNGTGKSQRVLVFAKGDKITEAEEAGADYVGESDYVQKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKAGIVHASIGKVSFSDEKLVENFKALQDVLAKAKPSSSKGTYFKSVAVTTTMGPGVKVDTASFKL
>LR134244.1|VED33443.1|2212971_2213394_-|50S-ribosomal-protein-L11
MAKKVEKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQEQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGVEKGSGEPNKNKVASVTKDQVREIANSKMQDLNAADEEAAMRIIEGTARSMGITVE
>LR134244.1|VED33445.1|2213574_2214123_-|Transcription-antitermination-protein-NusG
MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKKLVKKTFPGYVLVELVMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGLKEKTIDVELDVGEQVRIKSGPFANQVGEVQEIEAEKFKLTVLVDMFGRETPVEVEFDQIEKL
>LR134244.1|VED33447.1|2214133_2214316_-|preprotein-translocase-subunit-SecE
MAKKESFFQGVKSEMEKTSWPTKEELFKYTVIVVSTVIFFLVFFYALDLGITALKNLLIG
>LR134244.1|VED33449.1|2214635_2215217_-|RNA-polymerase-sigma-factor-sigW
MTHKNNNLKQQLLLSKSQQLDMELKAMLQQFNSFIMSRINCISQNDFEKDDLYQEVLIKIYLALERHHFQYDDSFIKYISRLIKSVKCDYYRRHYTQQKRYTNVVNDAVVEYQTNLLNRDRVEREILTCEAIKLLNAACEKLTKQEREVFEFYSKGYKPKEIAHLLGIKDKVVYNAIQRCKMKIRHHLEYKLK
>LR134244.1|VED33451.1|2215287_2215815_-|yacP-like-NYN-domain-protein
MKERYLIIDGYNMIGQSPTLSKIAKENLEEAREQLIDAIANYNAVIADEIVCVFDAYEQSGIEREYMYHGVKTVFTKEKETADSFIERYVYELYDKHTTHITVVTSDMSEQHAIFGSGAYRVSSREMWRDLRENQITVSKSLEDITETKPRTRIPLSEDILAEFEKIRRGNQKKD
>LR134244.1|VED33453.1|2215814_2216561_-|TrmH-family-tRNA/rRNA-methyltransferase-YacO
MEDIVIVGRHAVKEAIISGHSINKILIQDGIKKQQINDILKNAKDQKLIVQTVPKSKLDFLSTAPHQGVAALVAPYEYADFDQFLKQQQEKDGLSTVIILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVSLTQTVAKASTGAIQHVPVIRVTNLAKTIDELKNNGFWVAGTEASNATDYRDLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKRHSNGEK
>LR134244.1|VED33455.1|2216565_2216964_-|Small-protein;-cysteinyl-tRNA-synthetase-like-protein
MDNMNIKLLNPLTLAYMGDAVLDQHVRKYIVLKLRSKPNRLHQMSKLYVSAKSQAQTLETLIEEAWFTEEEMDILKRGRNAKSYTKAKNTDVQTYRKSSALEAVIGFLYLEHREERLKVLLDKIIEIVNERS
>LR134244.1|VED33457.1|2216956_2218357_-|cysteinyl-tRNA-ligase
MITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYEVIYVSNFTDVDDKLIKRSKELNESVPEIADKYIKAFYEDVGALNVKKATSNPRVMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGDQKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQIDQILENFEAVMDDDFNTANAVTAWYDLAKLANRYVLENVTSTKVIAKFKEVYQIFSDVLGVPLKGNQQDDLLDEEIEQLIEERNEARKNKDFARADEIRDHLKEQNIILEDTPQGVRFKRG
>LR134244.1|VED33459.1|2218340_2218982_-|Serine-acetyltransferase
MLRRMRDDIKMVFEQDPAARSTIEVVTTYAGLHAVWSHLIAHKLYNNQRYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKEKGKRHPDIGDNVLIAAGSKVLGNIQISSNVNIGANSVVLQSVPSYSTVVGIPGHIVKQDGKRIGKTFDHRNLPDPLYEQIKHLERQLEKTRNGEIQDDYII

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LR134244_1	1.1\|514950\|39\|LR134244\|CRISPRCasFinder	514950-514988	39	LR134244.1	520588-520626	2	0.949

1. spacer 1.1|514950|39|LR134244|CRISPRCasFinder matches to position: 520588-520626, mismatch: 2, identity: 0.949

tacttcttacgcagtagtgaaagctactgtgatccttaa	CRISPR spacer
tacttcttacgcagtagcgcaagctactgtgatccttaa	Protospacer
*****************.* *******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

984993 : 1021455

Staphylococcus_phage(96.15%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED31510.1\|984993_986403_+	O-succinylbenzoic acid-CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.9e-172	63.0
VED31511.1\|986392_987406_+	o-succinylbenzoic acid synthetase	A0A2H4PQM0	Staphylococcus_phage	4.4e-102	55.9
VED31512.1\|987389_987629_-	Putative cytosolic protein	A0A2H4PQM5	Staphylococcus_phage	8.8e-38	90.1
VED31513.1\|987689_988163_+	MutT/NUDIX hydrolase family protein	A0A2H4PQM4	Staphylococcus_phage	8.1e-51	62.4
VED31514.1\|988149_988923_+	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	A0A2H4PQM6	Staphylococcus_phage	9.0e-108	76.1
VED31515.1\|989398_990991_-	phosphoenolpyruvate carboxykinase	A0A2H4PQN1	Staphylococcus_phage	9.7e-290	90.4
VED31516.1\|991368_992568_+	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	2.3e-195	87.1
VED31517.1\|992687_993596_+	Uncharacterised protein	A0A2H4PQQ8	Staphylococcus_phage	4.3e-109	80.2
VED31518.1\|993748_994585_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.1e-106	68.8
VED31519.1\|994644_995004_-	CrcB family protein	NA	NA	NA	NA
VED31520.1\|995000_995363_-	camphor resistance protein CrcB	A0A2H4PQR0	Staphylococcus_phage	3.4e-33	65.0
VED31521.1\|995502_995808_-	membrane protein	NA	NA	NA	NA
VED31522.1\|996063_996777_+	Transaldolase	E3SM94	Prochlorococcus_phage	5.0e-20	34.5
VED31523.1\|996978_997434_+	putative staphylococcal protein	A0A2H4PQT8	Staphylococcus_phage	8.1e-24	59.2
VED31524.1\|997408_997855_-	comK family protein	NA	NA	NA	NA
VED31525.1\|997859_998348_-	RNA polymerase sigma factor sigS	A0A2H4PQT5	Staphylococcus_phage	7.1e-34	52.0
VED31526.1\|998540_998765_+	putative staphylococcal protein	NA	NA	NA	NA
VED31527.1\|999027_999882_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JNR1	Staphylococcus_phage	1.3e-38	42.3
VED31528.1\|1000204_1001704_+	pyridine nucleotide-disulfide oxidoreductase family protein	A0A2H4PQX2	Staphylococcus_phage	4.7e-20	82.5
VED31529.1\|1002195_1003239_+	riboflavin biosynthesis protein RibD	A0A2H4PQS8	Staphylococcus_phage	1.1e-137	66.8
VED31530.1\|1003245_1003878_+	riboflavin synthase subunit alpha	A0A2H4PQS5	Staphylococcus_phage	4.8e-83	73.8
VED31531.1\|1003892_1005074_+	riboflavin biosynthesis protein	A0A2H4PQS2	Staphylococcus_phage	3.3e-178	77.4
VED31532.1\|1005086_1005545_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-61	86.7
VED31533.1\|1005816_1006818_-	Proline dehydrogenase (Proline oxidase)	A0A2H4PQT6	Staphylococcus_phage	7.7e-144	78.4
VED31534.1\|1007050_1007878_+	lysophospholipase	NA	NA	NA	NA
VED31535.1\|1008281_1008683_+	repressor of toxins	NA	NA	NA	NA
VED31536.1\|1008736_1009300_-	SAM-dependent methyltransferase, MraW methylase family	A0A2H4PQV0	Staphylococcus_phage	7.6e-72	70.3
VED31537.1\|1009296_1010250_-	Fe-S oxidoreductase	A0A2H4PQV5	Staphylococcus_phage	3.0e-68	84.0
VED31538.1\|1010356_1011547_+	drug transporter	A0A2H4PQR6	Staphylococcus_phage	1.6e-175	78.8
VED31539.1\|1011830_1014245_+\|tRNA	leucyl-tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.3
VED31540.1\|1014268_1014580_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	1.1e-32	65.0
VED31541.1\|1014885_1021455_+	cell wall surface anchor family protein	A0A2H4PQU6	Staphylococcus_phage	2.5e-126	49.0

DBSCAN-SWA_2

1153143 : 1162167

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED31657.1\|1153143_1154148_+	Holliday junction DNA helicase RuvB	B3GAM6	uncultured_virus	2.0e-06	30.8
VED31658.1\|1154149_1155175_+\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
VED31659.1\|1155196_1156336_+\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.4e-85	46.1
VED31660.1\|1156351_1156612_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	3.3e-06	42.6
VED31661.1\|1156950_1159230_+	bifunctional preprotein translocase subunit SecD/SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	34.1
VED31662.1\|1159351_1161634_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	9.6e-65	29.4
VED31663.1\|1161648_1162167_+	Adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	7.3e-29	45.8

DBSCAN-SWA_3

1647379 : 1690665

uncultured_Caudovirales_phage(85.45%)

capsid,portal,tail,protease,integrase,terminase

attL 1646907:1646928|attR 1690727:1690748

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1646907:1646928	attL	NA	NA	NA	NA
VED32350.1\|1647379_1648609_-	phage protein	Q9AZ49	Lactococcus_phage	7.0e-46	31.8
VED32351.1\|1649518_1650931_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4J1Y5	uncultured_Caudovirales_phage	1.8e-279	96.6
VED32352.1\|1650942_1651194_-	Uncharacterised protein	A0A1W6JPX4	Staphylococcus_phage	1.3e-39	97.6
VED32353.1\|1651232_1651784_-	phage protein	A0A1W6JPW1	Staphylococcus_phage	1.5e-93	91.8
VED32354.1\|1651783_1652281_-	phage protein	A0A2H4J3H3	uncultured_Caudovirales_phage	3.0e-88	95.8
VED32355.1\|1652326_1652728_-	hypothetical phage membrane protein	A0A2H4J9S2	uncultured_Caudovirales_phage	2.1e-63	96.2
VED32356.1\|1652711_1653131_-	hypothetical phage membrane protein	A0A2H4J968	uncultured_Caudovirales_phage	3.9e-73	97.8
VED32357.1\|1653141_1653432_-	phi PVL ORF 22-like protein	A0A2H4JB13	uncultured_Caudovirales_phage	9.4e-34	79.1
VED32358.1\|1653475_1653622_-	phage protein	A0A2H4J4L2	uncultured_Caudovirales_phage	1.2e-16	97.9
VED32359.1\|1653611_1657853_-	phage minor structural, N-terminal region domain protein	A0A2H4J300	uncultured_Caudovirales_phage	0.0e+00	79.0
VED32360.1\|1657865_1659356_-	bacteriophage protein	A0A2H4J1X6	uncultured_Caudovirales_phage	1.7e-272	91.7
VED32361.1\|1659359_1665062_-	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	0.0e+00	89.9
VED32362.1\|1665338_1665656_-	Uncharacterised protein	A0A2H4J3G5	uncultured_Caudovirales_phage	6.8e-54	100.0
VED32363.1\|1665751_1666255_-\|tail	phage major tail, phi13 family protein	A0A2H4J9R4	uncultured_Caudovirales_phage	6.5e-83	99.4
VED32364.1\|1666319_1666724_-	phage protein	A0A2H4J6T2	uncultured_Caudovirales_phage	2.2e-73	99.3
VED32365.1\|1666724_1667120_-	putative phiSLT protein	A0A2H4JA97	uncultured_Caudovirales_phage	3.1e-64	87.0
VED32366.1\|1667116_1667470_-	Uncharacterised protein	A0A2H4J225	uncultured_Caudovirales_phage	2.6e-62	100.0
VED32367.1\|1667450_1667738_-	Bacteriophage	A0A2H4JAM0	uncultured_Caudovirales_phage	7.3e-47	96.8
VED32368.1\|1667743_1667914_-	Bacteriophage	A0A2H4JAK4	uncultured_Caudovirales_phage	4.3e-23	100.0
VED32369.1\|1667926_1669147_-\|capsid	phage major capsid protein	A0A2H4J1Z5	uncultured_Caudovirales_phage	2.4e-224	99.5
VED32370.1\|1669164_1669941_-\|protease	phage protease	A0A2H4J9Z1	uncultured_Caudovirales_phage	1.4e-129	92.6
VED32371.1\|1669930_1671097_-\|portal	putative phage portal protein	A0A2H4J9T2	uncultured_Caudovirales_phage	3.8e-219	99.5
VED32372.1\|1671108_1672761_-\|terminase	Phage terminase large subunit	A0A2H4J6U3	uncultured_Caudovirales_phage	0.0e+00	99.8
VED32373.1\|1672757_1673123_-	phage protein	A0A2H4J959	uncultured_Caudovirales_phage	6.6e-61	100.0
VED32374.1\|1673264_1673576_-	phage-associated homing endonuclease	A0A2H4J213	uncultured_Caudovirales_phage	6.5e-57	100.0
VED32375.1\|1673718_1674117_-	Phage protein	A0A2H4J2R3	uncultured_Caudovirales_phage	2.7e-68	100.0
VED32376.1\|1674129_1674282_-	Protein of uncharacterised function (DUF1514)	A0A2H4J823	uncultured_Caudovirales_phage	2.6e-19	96.0
VED32377.1\|1674281_1674656_-	phage transcriptional activator RinB	A0A2H4J9B5	uncultured_Caudovirales_phage	3.7e-22	96.4
VED32378.1\|1674648_1674798_-	phage-like protein	A0A2H4J497	uncultured_Caudovirales_phage	1.4e-09	67.4
VED32379.1\|1674802_1675036_-	Uncharacterised protein	NA	NA	NA	NA
VED32380.1\|1675072_1675393_-	mazG nucleotide pyrophosphohydrolase domain protein	A0A2H4J4F6	uncultured_Caudovirales_phage	7.1e-51	96.2
VED32381.1\|1675385_1675634_-	phage protein	A0A2H4JHI8	uncultured_Caudovirales_phage	2.4e-30	87.8
VED32382.1\|1675633_1675846_-	Uncharacterised protein	A1BU09	Staphylococcus_virus	1.5e-25	90.6
VED32383.1\|1675835_1676327_-	phage protein	A0A2H4J207	uncultured_Caudovirales_phage	8.5e-27	89.9
VED32384.1\|1676564_1676927_-	phage protein	A0A1W6JPT5	Staphylococcus_phage	2.2e-64	100.0
VED32385.1\|1676963_1677209_-	phage protein	A0A2H4J205	uncultured_Caudovirales_phage	1.0e-36	94.9
VED32386.1\|1677214_1677403_-	Uncharacterised protein	A0A1W6JPR6	Staphylococcus_phage	3.6e-26	93.5
VED32387.1\|1677407_1677818_-	PVL ORF-50 family protein	A0A2H4JAE5	uncultured_Caudovirales_phage	2.6e-61	89.0
VED32388.1\|1677818_1678010_-	Uncharacterised protein	A0A2H4J209	uncultured_Caudovirales_phage	3.6e-26	100.0
VED32389.1\|1678010_1678322_-	VRR-NUC domain	A0A2H4JAY8	uncultured_Caudovirales_phage	3.1e-51	98.1
VED32390.1\|1678595_1680905_-	primase, superantigen-encoding pathogenicity islands SaPI	A0A2H4J4H0	uncultured_Caudovirales_phage	0.0e+00	98.3
VED32391.1\|1680882_1681431_-	Protein of uncharacterised function (DUF669)	A0A2H4J2X4	uncultured_Caudovirales_phage	1.9e-99	98.4
VED32392.1\|1681445_1682852_-	putative helicase	A0A2H4JBR2	uncultured_Caudovirales_phage	1.9e-268	97.0
VED32393.1\|1682848_1683172_-\|integrase	putative integrase	NA	NA	NA	NA
VED32394.1\|1683164_1683860_-	phage nucleotide-binding protein	A0A2H4J2Z5	uncultured_Caudovirales_phage	4.0e-131	99.6
VED32395.1\|1683849_1684080_-	phage protein	A0A2H4J633	uncultured_Caudovirales_phage	1.3e-33	93.4
VED32396.1\|1684135_1684300_-	Uncharacterised protein	A0A2H4J9U2	uncultured_Caudovirales_phage	1.3e-24	98.1
VED32397.1\|1684379_1684580_-	SaPI1 Orf21	A0A1W6JQE8	Staphylococcus_phage	1.8e-12	54.4
VED32398.1\|1684583_1684748_-	Uncharacterised protein	A0A2H4J2X5	uncultured_Caudovirales_phage	2.6e-17	94.3
VED32399.1\|1684819_1685095_+	phage protein	NA	NA	NA	NA
VED32400.1\|1685069_1685219_-	Uncharacterised protein	NA	NA	NA	NA
VED32401.1\|1685221_1685539_-	Uncharacterized protein conserved in bacteria	A0A2H4JAF6	uncultured_Caudovirales_phage	5.2e-54	98.1
VED32402.1\|1685584_1685878_+	Uncharacterised protein	NA	NA	NA	NA
VED32403.1\|1685878_1686022_-	Uncharacterised protein	NA	NA	NA	NA
VED32404.1\|1686035_1686281_-	phage protein	A0A2H4JBS5	uncultured_Caudovirales_phage	1.5e-40	100.0
VED32405.1\|1686320_1686533_-	phage regulatory protein	A0A2H4J3K6	uncultured_Caudovirales_phage	7.1e-31	94.3
VED32406.1\|1686685_1687000_+	phage repressor	A0A2H4JCJ2	uncultured_Caudovirales_phage	4.0e-38	76.7
VED32407.1\|1687016_1687481_+	phage protein	A0A2H4J2Y7	uncultured_Caudovirales_phage	2.9e-69	83.1
VED32408.1\|1687494_1688091_+	Uncharacterised protein	NA	NA	NA	NA
VED32409.1\|1688163_1688328_+	Uncharacterised protein	A0A2H4JAG5	uncultured_Caudovirales_phage	4.3e-20	100.0
VED32410.1\|1688491_1689460_+	Protein of uncharacterised function (DUF3644)	A0A0N9RUA4	Staphylococcus_phage	1.9e-86	50.2
VED32411.1\|1689639_1690665_+\|integrase	integrase	A0A2H4JB04	uncultured_Caudovirales_phage	3.2e-193	98.5
1690727:1690748	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1763192 : 1771662

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED32536.1\|1763192_1763759_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.7e-29	40.3
VED32538.1\|1763761_1764790_-	phosphoribosylaminoimidazole synthetase	Q58MH8	Prochlorococcus_phage	2.7e-67	45.0
VED32539.1\|1764782_1766267_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.9e-46	32.8
VED32541.1\|1766245_1768435_-	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	4.8e-138	38.8
VED32543.1\|1768427_1769099_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
VED32545.1\|1769100_1769361_-	phosphoribosylformylglycinamidine synthase, PurS protein	NA	NA	NA	NA
VED32547.1\|1769360_1770065_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	G8EYA2	Synechococcus_phage	1.5e-48	43.8
VED32549.1\|1770065_1771193_-	phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA
VED32551.1\|1771179_1771662_-	phosphoribosylaminoimidazole carboxylase PurE	A0A2P0VNU7	Tetraselmis_virus	4.4e-20	42.7

DBSCAN-SWA_5

1999192 : 2010941

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED33021.1\|1999192_2000161_-	FecCD transport family protein	A0A2H4IY97	uncultured_Caudovirales_phage	3.7e-143	81.4
VED33023.1\|2000387_2001362_-	ribonucleotide reductase of class Ib (aerobic), beta subunit	A0A2H4J4P3	uncultured_Caudovirales_phage	1.1e-179	96.3
VED33025.1\|2001606_2003712_-	ribonucleotide-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	93.7
VED33028.1\|2003674_2004073_-	ribonucleotide reductase stimulatory protein	A0A2H4J545	uncultured_Caudovirales_phage	2.4e-56	78.8
VED33030.1\|2004870_2005737_+	Integral membrane domain protein	NA	NA	NA	NA
VED33032.1\|2005760_2006261_+	NADPH dependent preQ0 reductase	E7DN65	Pneumococcus_phage	3.8e-51	64.9
VED33034.1\|2006595_2008101_+	Di/tripeptide permease YjdL	A0A0P0IY73	Acinetobacter_phage	1.6e-55	31.5
VED33036.1\|2008250_2009180_+	putative diacylglycerol kinase protein	NA	NA	NA	NA
VED33038.1\|2009261_2009798_-	putative 5'(3')-deoxyribonucleotidase	A0A0A0PKY7	Bacillus_phage	2.9e-28	37.8
VED33040.1\|2009885_2010941_-	histidinol-phosphate aminotransferase	A0A0H3TLT9	Faustovirus	5.7e-20	27.4

DBSCAN-SWA_6

2023718 : 2030921

Pandoravirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED33062.1\|2023718_2024867_-	para-aminobenzoate synthase component	S4VNU7	Pandoravirus	3.2e-24	39.6
VED33063.1\|2024850_2025444_-	para-aminobenzoate synthase, glutamine amidotransferase, component II	A0A0P0IKJ1	Acinetobacter_phage	4.9e-37	40.4
VED33065.1\|2025768_2026440_+	exoenzyme S synthesis protein B	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.2e-65	55.1
VED33067.1\|2026441_2026861_+	6-pyruvoyl tetrahydrobiopterin synthase	S4U060	uncultured_phage	1.7e-07	26.9
VED33069.1\|2026860_2027574_+	coenzyme PQQ synthesis-like protein	E7DN68	Pneumococcus_phage	6.5e-52	42.7
VED33071.1\|2027676_2028276_+	Uncharacterised protein	NA	NA	NA	NA
VED33073.1\|2028742_2029849_-	glucosyl transferase	A8CG95	Salmonella_phage	1.4e-61	41.0
VED33074.1\|2030078_2030921_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.6e-52	41.7

DBSCAN-SWA_7

2368909 : 2386463

uncultured_Caudovirales_phage(43.75%)

transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED33702.1\|2368909_2369395_-\|terminase	putative phage terminase	Q4ZE85	Staphylococcus_phage	1.6e-65	79.0
VED33704.1\|2369743_2370340_-\|transposase	transposase	A0A2H4JBG0	uncultured_Caudovirales_phage	7.1e-36	43.8
VED33706.1\|2370353_2371115_-	pathogenicity island protein	A0A2H4JD56	uncultured_Caudovirales_phage	5.7e-38	39.1
VED33708.1\|2371759_2372401_-\|transposase	transposase	Q4ZE67	Staphylococcus_phage	1.4e-90	76.1
VED33710.1\|2372402_2372666_-	pathogenicity island protein	NA	NA	NA	NA
VED33712.1\|2372667_2373024_-	pathogenicity island protein	A0A2H4JBD4	uncultured_Caudovirales_phage	1.5e-54	84.7
VED33714.1\|2373273_2374629_-	putative DNA primase-phage associated	A0A2H4JBE3	uncultured_Caudovirales_phage	4.0e-228	86.9
VED33716.1\|2374640_2375510_-	putative phage primase	A0A2H4JEH3	uncultured_Caudovirales_phage	1.2e-145	82.7
VED33718.1\|2375601_2375910_-	mobile element-associated DUF1474-containing protein, putative	A0A2H4JB50	uncultured_Caudovirales_phage	1.4e-19	46.7
VED33720.1\|2375909_2376323_-	pathogenicity island protein	A0A2H4JBF1	uncultured_Caudovirales_phage	2.5e-64	93.3
VED33722.1\|2376324_2376462_-	Uncharacterised protein	NA	NA	NA	NA
VED33724.1\|2376477_2376750_-	pathogenicity island protein	Q4ZE77	Staphylococcus_phage	2.4e-39	87.8
VED33726.1\|2376750_2376972_-	putative transcriptional regulator	NA	NA	NA	NA
VED33728.1\|2377144_2377717_+	Lambda repressor-like protein	NA	NA	NA	NA
VED33730.1\|2377743_2379060_+	exported protein	M1NRY5	Streptococcus_phage	5.2e-63	43.3
VED33732.1\|2379081_2380305_+	Integrase	Q4ZE80	Staphylococcus_phage	5.5e-176	78.3
VED33734.1\|2380531_2380774_-	30S ribosomalprotein S18p	NA	NA	NA	NA
VED33736.1\|2380818_2381334_-	single-strand DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	2.7e-60	73.1
VED33738.1\|2381355_2381652_-	30S ribosomal protein S6	NA	NA	NA	NA
VED33740.1\|2382027_2382849_+	1,4-beta-N-acetylmuramidase	A0A291I9H5	Lactobacillus_phage	1.8e-37	46.4
VED33742.1\|2382910_2383102_+	Uncharacterised protein	U3PCX8	Staphylococcus_phage	2.2e-23	81.7
VED33744.1\|2383264_2384362_-	GTP-binding and nucleic acid-binding protein YchF	NA	NA	NA	NA
VED33746.1\|2384373_2384577_-	Putative cytosolic protein	NA	NA	NA	NA
VED33748.1\|2384597_2385476_-	potassium efflux system KefA protein/Small-conductance mechanosensitive channel	NA	NA	NA	NA
VED33750.1\|2385623_2386463_-	transcription terminator	A0A1C9EHW0	Gordonia_phage	3.5e-12	33.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134244

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection