CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134266	Streptococcus viridans strain NCTC3166 genome assembly, chromosome: 1	1 crisprs	csa3,DEDDh,cas3,csm6,DinG	1	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134266_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134266_1

886023-886109

TypeIII-A

Consensus_repeat	Method
TGAACACGAGCGGAAAGTTTTCT	CRISPRCasFinder

1 spacers

csm6

The CRISPR arrays of LR134266_1

>merge|LR134266|1|886023-886109|CRISPRCasFinder
TGAACACGAGCGGAAAGTTTTCTAAACAAAATACACACAGAAAGGTAGAGCATGTGTTCTGATTTGAACACGAGCGGAAAGCTTTTC

>LR134266|1|1|886023-886109|CRISPRCasFinder
TGAACACGAGCGGAAAGTTTTCT	AAACAAAATACACACAGAAAGGTAGAGCATGTGTTCTGATT
TGAACACGAGCGGAAAGCTTTTC

Protein	Signature genes	Signature genes Name	Protein_function
LR134266.1\|VED67128.1\|883773_884583_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
LR134266.1\|VED67123.1\|878809_879622_+\|putative-repair-protein	unknown	unknown	gnl\|CDD\|225217
LR134266.1\|VED67129.1\|884588_885854_+\|voltage-gated-chloride-channel-family-protein,CIC-family	unknown	unknown	gnl\|CDD\|238505
LR134266.1\|VED67134.1\|889594_890965_+\|membrane-protein	unknown	unknown	unknown
LR134266.1\|VED67139.1\|895176_895704_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|235668
LR134266.1\|VED67126.1\|882004_883216_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
LR134266.1\|VED67138.1\|894243_894876_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
LR134266.1\|VED67127.1\|883220_883760_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|226319
LR134266.1\|VED67120.1\|877395_877758_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134266.1\|VED67122.1\|878141_878570_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134266.1\|VED67133.1\|888543_889452_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
LR134266.1\|VED67136.1\|891973_892912_+\|Dihydroorotate-dehydrogenase-B	unknown	unknown	gnl\|CDD\|235982
LR134266.1\|VED67131.1\|886971_887730_+\|histidine-protein-kinase	csm6	cd09746_csm6_CAS-III-A	gnl\|CDD\|312974
LR134266.1\|VED67124.1\|879664_881038_-\|tRNA-modification-GTPase-TrmE	unknown	unknown	gnl\|CDD\|235392
LR134266.1\|VED67135.1\|891156_891963_+\|dihydroorotate-dehydrogenase-electron-transfer-subunit	unknown	unknown	gnl\|CDD\|234601
LR134266.1\|VED67121.1\|877872_877992_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134266.1\|VED67125.1\|881200_881878_+\|ribose-5-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234816
LR134266.1\|VED67130.1\|886261_886972_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
LR134266.1\|VED67137.1\|893286_893979_+\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
LR134266.1\|VED67132.1\|887740_888472_+\|NAD-dependent-deacetylase	unknown	unknown	gnl\|CDD\|234777

Protein	Function_ID	Function_description	E-value
LR134266.1\|VED67128.1\|883773_884583_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	2.35826e-165
LR134266.1\|VED67123.1\|878809_879622_+\|putative-repair-protein	gnl\|CDD\|225217	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones].	4.4384e-22
LR134266.1\|VED67129.1\|884588_885854_+\|voltage-gated-chloride-channel-family-protein,CIC-family	gnl\|CDD\|238505	cd01033, ClC_like, Putative ClC chloride channel. Clc proteins are putative halogen ion (Cl-, Br- and I-) transporters found in eubacteria. They belong to the ClC superfamily of halogen ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. This superfamily lacks any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge.	2.21968e-86
LR134266.1\|VED67136.1\|891973_892912_+\|Dihydroorotate-dehydrogenase-B	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	3.80926e-174
LR134266.1\|VED67139.1\|895176_895704_+\|Uncharacterised-protein	gnl\|CDD\|235668	PRK06007, fliF, flagellar basal body M-ring protein FliF.	3.07847e-05
LR134266.1\|VED67126.1\|882004_883216_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
LR134266.1\|VED67138.1\|894243_894876_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	9.27831e-77
LR134266.1\|VED67127.1\|883220_883760_+\|phosphopentomutase	gnl\|CDD\|226319	COG3797, COG3797, Uncharacterized protein conserved in bacteria [Function unknown].	7.1169e-53
LR134266.1\|VED67133.1\|888543_889452_-\|transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.45689e-35
LR134266.1\|VED67131.1\|886971_887730_+\|histidine-protein-kinase	gnl\|CDD\|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	3.05735e-18
LR134266.1\|VED67124.1\|879664_881038_-\|tRNA-modification-GTPase-TrmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
LR134266.1\|VED67135.1\|891156_891963_+\|dihydroorotate-dehydrogenase-electron-transfer-subunit	gnl\|CDD\|234601	PRK00054, PRK00054, dihydroorotate dehydrogenase electron transfer subunit; Reviewed.	7.09043e-118
LR134266.1\|VED67125.1\|881200_881878_+\|ribose-5-phosphate-isomerase	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	7.80955e-118
LR134266.1\|VED67130.1\|886261_886972_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.84101e-152
LR134266.1\|VED67137.1\|893286_893979_+\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	2.02969e-132
LR134266.1\|VED67132.1\|887740_888472_+\|NAD-dependent-deacetylase	gnl\|CDD\|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.70352e-115

>LR134266.1|VED67129.1|884588_885854_+|voltage-gated-chloride-channel-family-protein,CIC-family
MERIVRTLQAIPYKLRMVLAACLLGLVSGFAGIILHDLLEFVEGLVFGHSEHESSFLTDGVPPYRIGISLLIVGLTSALVWYSLQRKGKLLSIKGQMKEEDSRLALHFWRQLLHSSWQIIAVGGGAPIGKEGAPREIGALLAGRLAKGFGLPLADRIFLIACGAGAGLAAVYQVPLTSVFFIFETLGIAFSLKRFFLAGISTYVAAYTAGWVISDHALYKLPITTWSLQGLWLLPILVLVLTPLAYGFARLTKQATAHRIKDKRILLTLPLAFLFLAGLSLKLPHLLGNGRMVAQEVINGISWKTAFLLFVLKALVVLLTLWAGAYGGTLTPSFALGMAGAALFTLAFGLESPSTILLLGAVCFLTVTLKAPFSATGLVIGFTGQGLDALPYLLLTAFLTVGLTQRLDCLFGRKLKESSSR
>LR134266.1|VED67128.1|883773_884583_+|purine-nucleoside-phosphorylase
MTLLAKINETAAFLKGKGIEAPEFGLILGSGLGELAEEIENAVVVDYSDIPNWGQSTVVGHAGKLVYGDLAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVLVTNAAGGIGFGPGTLMAITDHINMTGQNPLIGENLDDFGPRFPDMSKAYTPEYRETAHQVADKLGIKLDDGVYIGVTGPTYETPAEIRAYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNHAAGFQEELNHEEVVEVTERVKGDFKGLLKAILAEL
>LR134266.1|VED67127.1|883220_883760_+|phosphopentomutase
MRFALLVRGINVGGKNKVVMAQLRQELTELGLEQVETYINSGNIFFTTDLSRSQLVECLSTFFENHYPFIQCFSLLSREDYEAECANLPQWWTEEMPRKDVLFYTEGLDRESVEEKLLALKLGDEVLHLGKLAVFWGKFSEASYAKTAYHKHLMKMPFYRQITIRNANTFDKIGRLLKK
>LR134266.1|VED67126.1|882004_883216_+|phosphopentomutase
MPKFNRMHLVVLDSVGIGAAPDANNFVNAGVPDGASDTLGHISKAVGLNVPNMAKLGLGNIPREQALKTVPAESNPTGYATKLEEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEEILTKIEEFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPLDELYRICEYARSITLERPALLGRIIARPYVGEPGNFTRTANRRDLAVSPFAPTVLDKLNEAGIDTYAVGKINDIFNGAGINHDMGHNKSNSHGIDNLIKAMKSEEFKHGFSFTNLVDFDALYGHRRDPHGYRDCLHEFDERLPEIIAAMKEDDLLMITADHGNDPTYVGTDHTREYIPFLAYSPSFKGSGLIPVGHFADISATVADNFGVEKAMIGESFLDKLV
>LR134266.1|VED67125.1|881200_881878_+|ribose-5-phosphate-isomerase
MVNLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVAELGRRIKEEGLQITAVTTSSVTYEQAEGLGIPLKAIDNVEVVDLTVDGADEVDPALNGIKGGGGALLMEKIVATNSKDCIWIVDESKQVETLGAFKLPVEVVQYGAENLFRHFEKKGYSPAYREKDGQRFVTDQGNFIIDLDLKVIPDAEALAEELDRTVGVVDHGLFLGMVSKVIVGTPEGPKIISKSL
>LR134266.1|VED67124.1|879664_881038_-|tRNA-modification-GTPase-TrmE
MITREFDTIAAISTPLGEGAIGIVRLSGTDSFKIAQKIFKGKDLTSVASHTLNYGHIVDPDKDEILDEVMVGAMRSPKTFTREDIIEINTHGGIAVTNEILQLVIREGARLAEPGEFTKRAFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNTRQEILNTLAQVEVNIDYPEYDDVEEATTEIIREKSTEFEALLTNLLKTARRGKILREGISTAIIGRPNVGKSSLLNNLLREEKAIVTDIEGTTRDVIEEYVNINGVPLKLFDTAGIRETEDIVERIGVERSRKALKEADLVLLVLNASEPLTDQDRQLLEISQDSNRIILLNKVDLPQQIELDEIPADHIKISVLKNQNINEIEDRINALFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNEGLAMGMPVDLLQVDLTRTWEILGEITGDAAPDELITQLFSQFCLGK
>LR134266.1|VED67123.1|878809_879622_+|putative-repair-protein
MKRKSILFLFLFLLAIGLAYETQSITAGWMTGSQYGIIGVSFLLLLVYAIPAVWALFHFAKKWKLSWIPVLFSLLGGGFIAGWLSSFTNTYFHEMIQAVAPNSDFWNQYESAIAGPLFEEPFKLIPIFFVLYLFNVRRIKSIFLLAIASGLGFQIVEDFAYIRQDMPEGFSYAVSGILGRIMNGVVSHWTYTALFMVGLYLILQATKGRKELMLTGWFYFVAGFGLHFVGNSPFGQIETELPLAIPFLTAVGLFLIYQAYLTVQSLDQGN
>LR134266.1|VED67122.1|878141_878570_+|Uncharacterised-protein
MDKLYIVVDGIEHQYFDCDSTGYYLISYDPLSENNGYKLFDSELKQYREYLTEKQIEKKYKIIDHIWFNEQKWDIFQRSDDNLDKPNSWVTIVSDDIQFLKRNGLWKKENLVESRYGHLYYCSLPIEAEKFSLIRTRKNLPI
>LR134266.1|VED67121.1|877872_877992_+|Uncharacterised-protein
MNNTEFKKIVGETLKSQGFAYENKYYTFENTDLKVFIGF
>LR134266.1|VED67120.1|877395_877758_+|Uncharacterised-protein
MIFVKKIEWIDIDTKEAEVTLSDNQYELVCFSDEFFGKIGGKFDDMLYAIVDGDVYKSEDKLFLVKHLNSFEYFIIAKIIDKTRNIAQVGEFLINIGGGIPNDLENGEFVEFRVRRIDIY
>LR134266.1|VED67130.1|886261_886972_+|purine-nucleoside-phosphorylase
MSIHIAAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNEVRNMFGYTGIYKGHRVSVMGTGMGMPSISIYARELIVDYDVKKLIRVGTAGSLNGDVHVRELVLAQAASTNSNIIRNDWPQYDFPQIASFDLLDKAYHIAKDLGMTTHVGNVLSSDVFYSNYFEKNLELGKWGVKAVEMEAAALYYLAAQHQVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAD
>LR134266.1|VED67131.1|886971_887730_+|histidine-protein-kinase
MTEYLHYEWLYDLQTYQYSRVLRSAKKQKEVPELVLTLLQLMTERRELNIQPIMNQKLRTDLLEATGFQLFWHEDPEEEQLANYLYDLEAKLRNDQIIDFIRAVSPAIYRIFMRLIEMQIPDIADYIHNSKESSYDHWKFEKIRSSDNAALQNFHSESAVNSSSLTELIILLDLPDSTKDAAKQLRELEKSVRNPLAHLIKPFDEEELHRTTGFSSQHFMELLVSLAQETGIVYQREPFYFDQANALIEALL
>LR134266.1|VED67132.1|887740_888472_+|NAD-dependent-deacetylase
MDKLKDLQDVIDHSQNIVFFGGAGVSTESNIPDFRSSDGVYSVTLGRHFTAEQLVSHTMFVRYPEDFFDFYKKYLIYPDAKPNAAHRYLAWLEQTGKLKAVVTQNIDSLHEMAGSKKVLKLHGSADHNYCTGCQRFYDLEAFLALEGPIPYCLDCGKVVKPDVTLYEEALDMDVFSQAARAIQEADVLIIGGTSLVVYPAASLIQYFHGKHLVVINKTNIPQDKQADLVIEGKIGQVFSQLRQ
>LR134266.1|VED67133.1|888543_889452_-|transcriptional-regulator
MRIQQLHYIIKIVETGSMNEASKQLFITQPSLSNAVRDLEKEMGIDIFIRNPKGITLTKDGMEFLSYARQVVEQTQLLEERYKNPVANRELFSVSSQHYAFVVEAFVSLLKKSDMEKYELFLRETRTWEIIDDVKNFRSEIGVLFLNGYNRDVLSKMLDDSHLKATHLFTAQPHIFVSKTNPLANKEVVKLEDLEDFPYLSYDQGTHNSFYFSEEILSQEHHKKSIVVSDRATLFNLLIGLDGYTIATGILNSNLNGDNIVSIPLDIDDPIELVYIQHEKASLSKMGEKFIEYLLEEVQFDK
>LR134266.1|VED67134.1|889594_890965_+|membrane-protein
MKRIAHWYKKWNQELETKFLASLVKINFMTNFLIFLSLSVFLIIRSLPGNIQSLGFWNAIFGVGIYSVTILVHALVVSYFVPNIFVILYVISRWSTIQAQTLEKELVGVYDEKEEEKIKRRVNNRKYFVILWIGVFGSILEFFVIYLVKDLTRYDWTKQLINEQKHTMIWSEALPTILILALISFLALVIYSYRDANSLSPLLNIFCISGILMGLVLVVVFDIQLQVIGCHTVFLLVYSISLLRTRMKEWEGESDLERVYDNPILQRFHLILHQSKHWPWLAVIFALPLLAVLVMVLMLFGQRPDSLVKAWTNTADWTFSEKIPPQNLIIDEHYLCTVAAGGHEKVVKPQRMGVRHGHPVVVNRQLCIANAFEQVLEEKTPRFHRFLRRNYDRYGYPFAKHIKKKWAMDVIYYLMKPLEWLFLLVLYLVDHKPENRIALQYIPPVPEGFSPETDGK
>LR134266.1|VED67135.1|891156_891963_+|dihydroorotate-dehydrogenase-electron-transfer-subunit
MVSDSCKKRFGKIMMEDMELIAQEEIAPRIFSMVLKGKMVEQMLPGQFLHIRVPDDSKLLRRPISISEIDPDNQTCRLIYRVEGGGTAIFSHLPVGSFLSVMGPQGNGFDLKGLSQGARALIIGGGIGVPPLVQVAKQLHEQGVEVHSVLGFANKEAVILEEELRQYGQVTITTDDGSYGTEGYVSTVIDQMDQEFDAIYSCGAPGMLKYVNTKFHNHPRAYISMESRMACGMGACYACVVHLENASQAANKRVCEDGPVFETGTIVM
>LR134266.1|VED67136.1|891973_892912_+|Dihydroorotate-dehydrogenase-B
MTSNRLAVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTAEARFGNPTPRVAETPAGMLNAIGLQNPGVDVVLAEKLPWLAENYPDLPIIANVAGFSNEEYATVSRKISQAPNVTAIELNISCPNVDHGNNGLLIGQVPELAYDAVKAAVEASSVPVYVKLTPSVADITQVAKAAEDAGATGLTMINTLVGMRFDLKTGKPIIANGTGGMSGPAIFPVALKLIRQVAQSTKLPIIGMGGVDSAEAAIEMMIAGASAIGVGTANFTDPYACPTIIQELPKVMDQYGITSLKGLRRHVRENLL
>LR134266.1|VED67137.1|893286_893979_+|orotidine-5'-phosphate-decarboxylase
MREERPIIALDFPAFEDVKNFLEHFPEDEKLFVKIGMEFFYAVGPEIVHYLKGRGHSIFLDLKLHDIPNTVKSAMSVLGTFGVDMVTVHAAGGVEMMCEAKKALGPGAKLVAVTQLTSTSEEDMRDCQNIQTTVQESVVNYARKAQEAGLDGVVCSAHEVDLIKKATAEDFVCVTPGIRPAGAEIGDQKRVMTPQEAHAIGSDYIVVGRPIIQAENPWDAYHEIKRQWNA
>LR134266.1|VED67138.1|894243_894876_+|orotate-phosphoribosyltransferase
MSLAKDIASHLLKIEAVYLKPEEPFTWASGIKSPIYTDNRVTLAYPETRTLIENGFVDKIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVPQGQKMVVVEDLISTGGSVLDAVAAAKREGADVLGVVAIFTYQLEKADKKFAEAGVQLETLSNYTELIHLAEEQGYITSEGLELLRRFKENQETWQDN
>LR134266.1|VED67139.1|895176_895704_+|Uncharacterised-protein
MTKEKYLEMKKQAIVWFTVNIIISLIAITGGILVIISKSRHIPFLLMSLGAISLMNQVLITPAFNAKKATEEQHPEWKELSTKGTKMPVEDFQKGFLISVAALLIVITGFFMFYRPLPKADPTVSNLTPKDVQILQELEEDIDSNISSDSNSLDIDEAKDLAEKAQKENWLKRDE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LR134266_3	3.1\|1128184\|26\|LR134266\|CRISPRCasFinder	1128184-1128209	26	LR134266.1	1128229-1128254	2	0.923

1. spacer 3.1|1128184|26|LR134266|CRISPRCasFinder matches to position: 1128229-1128254, mismatch: 2, identity: 0.923

tcttactagaacttgaagaagagtat	CRISPR spacer
tcgtactagaatttgaagaagagtat	Protospacer
** ********.**************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

29649 : 37799

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED66280.1\|29649_29895_+	acyl carrier protein	E3SMK8	Prochlorococcus_phage	2.0e-05	37.3
VED66281.1\|30064_30772_+	phosphoribosylaminoimidazole-succinocarboxamide synthetase	A0A1D8KNF0	Synechococcus_phage	5.1e-41	39.7
VED66282.1\|30835_34561_+	phosphoribosylformylglycinamidine synthase II (FGAM synthetase)	A6N228	Microbacterium_phage	1.9e-38	26.4
VED66283.1\|34573_36013_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.0e-51	33.6
VED66284.1\|36043_37066_+	phosphoribosylaminoimidazole synthetase	A0A1D7SE90	Cyanophage	1.6e-64	44.0
VED66285.1\|37250_37799_+	phosphoribosylglycinamide (GAR) formyltransferase	M4QRX9	Synechococcus_phage	2.7e-26	37.2

DBSCAN-SWA_2

247845 : 307251

Pithovirus(15.38%)

protease,transposase,integrase,tRNA,bacteriocin

attL 247601:247615|attR 265454:265468

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
247601:247615	attL	NA	NA	NA	NA
VED66507.1\|247845_250401_+\|transposase	putative transposase	NA	NA	NA	NA
VED66508.1\|250417_250957_+	Domain of uncharacterised function (DUF1851)	NA	NA	NA	NA
VED66509.1\|251450_252596_-	putative low temperature requirement protein A	NA	NA	NA	NA
VED66510.1\|252943_253954_-	membrane protein	NA	NA	NA	NA
VED66511.1\|254294_254987_-	membrane protein	NA	NA	NA	NA
VED66512.1\|254988_255816_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	9.3e-18	28.1
VED66513.1\|255889_256399_-	transcriptional regulator, xre family protein	A0A1S5SDT3	Streptococcus_phage	4.2e-05	30.4
VED66514.1\|256593_256791_+\|integrase	integrase/recombinase, phage associated	NA	NA	NA	NA
VED66515.1\|256836_257814_+	replication initiator protein	NA	NA	NA	NA
VED66516.1\|257825_258014_+	Domain of uncharacterised function (DUF3173)	NA	NA	NA	NA
VED66517.1\|258015_259155_+\|integrase	integrase/recombinase, phage associated protein	Q9AZR0	Lactococcus_phage	1.6e-39	30.9
VED66518.1\|259576_260848_-	AAA family ATPase	A0A127AWE7	Bacillus_phage	1.8e-97	46.6
VED66519.1\|260962_261433_+	Protein of uncharacterised function (DUF3013)	NA	NA	NA	NA
VED66520.1\|261450_262524_+	putative peptidase	NA	NA	NA	NA
VED66521.1\|262546_263089_+	Uncharacterised protein	NA	NA	NA	NA
VED66522.1\|263116_263572_+	MutT/NUDIX family protein	NA	NA	NA	NA
VED66523.1\|263568_264042_+	GNAT family acetyltransferase	NA	NA	NA	NA
VED66524.1\|264176_265130_+	ribosomal protein methyltransferase	NA	NA	NA	NA
VED66525.1\|265131_265881_+	RsmE family RNA methyltransferase	NA	NA	NA	NA
265454:265468	attR	NA	NA	NA	NA
VED66526.1\|265922_268376_-	bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein	NA	NA	NA	NA
VED66527.1\|268637_270857_+	GTP diphosphokinase	A0A2I2L310	Orpheovirus	5.0e-10	36.5
VED66528.1\|271234_271678_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
VED66529.1\|271700_272354_-	iron-dependent repressor	NA	NA	NA	NA
VED66530.1\|272494_273520_+	Protein of uncharacterised function (DUF3114)	NA	NA	NA	NA
VED66531.1\|273627_274122_-	thiol peroxidase	NA	NA	NA	NA
VED66532.1\|274209_275142_-	zinc/manganese ABC transporter binding protein	NA	NA	NA	NA
VED66533.1\|275153_275996_-	metal ABC transporter membrane protein	NA	NA	NA	NA
VED66534.1\|275992_276715_-	iron ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.0e-17	29.2
VED66535.1\|276863_278759_+	endopeptidase O	E3T4I7	Cafeteria_roenbergensis_virus	6.7e-72	30.0
VED66536.1\|279032_280124_+	glycerol dehydrogenase	NA	NA	NA	NA
VED66537.1\|280305_281052_-	ABC transporter	NA	NA	NA	NA
VED66538.1\|281044_281878_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	4.2e-18	26.2
VED66539.1\|281874_282105_-	Uncharacterised protein	NA	NA	NA	NA
VED66540.1\|282334_283258_-	transcription activator plcR	NA	NA	NA	NA
VED66541.1\|283549_283690_+	Uncharacterised protein	NA	NA	NA	NA
VED66542.1\|283784_284459_+\|protease	putative metal-dependent membrane protease	NA	NA	NA	NA
VED66543.1\|284646_286629_+	AliA protein	NA	NA	NA	NA
VED66544.1\|286832_289334_+\|tRNA	leucyl-tRNA synthetase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	66.7
VED66545.1\|289544_289703_-	Uncharacterised protein	NA	NA	NA	NA
VED66546.1\|289917_290106_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
VED66547.1\|290274_290967_+	glutamine amidotransferase	NA	NA	NA	NA
VED66548.1\|291095_292493_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
VED66549.1\|292711_293638_+	putative transcriptional regulator	NA	NA	NA	NA
VED66550.1\|293976_294906_+	ABC transporter-like protein CylA	A0A2H4PQG7	Staphylococcus_phage	3.5e-21	31.2
VED66551.1\|294898_295777_+	ABC transporter-like protein CylB	NA	NA	NA	NA
VED66552.1\|296103_297912_+	glucosamine-fructose-6-phosphate aminotransferase	A7IW18	Paramecium_bursaria_Chlorella_virus	1.5e-100	39.1
VED66553.1\|298184_299006_-	cof family hydrolase	NA	NA	NA	NA
VED66554.1\|299329_300331_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
VED66555.1\|300348_300549_+	Uncharacterised protein	NA	NA	NA	NA
VED66556.1\|300648_301650_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
VED66557.1\|301677_302556_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
VED66558.1\|302621_303314_+	amino acid ABC transporter permease	NA	NA	NA	NA
VED66559.1\|303317_304004_+	amino acid ABC transporter permease	NA	NA	NA	NA
VED66560.1\|304023_304788_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.3e-37	42.1
VED66561.1\|305145_307251_+\|protease	ATP-dependent Clp protease, ATP-binding subunit ClpL	H6X3M6	Enterobacteria_phage	9.6e-120	38.2

DBSCAN-SWA_3

505698 : 512539

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED66747.1\|505698_506919_+	cytosine-specific methyltransferase	V5URQ5	Oenococcus_phage	2.4e-131	58.4
VED66748.1\|506996_508586_+	Uncharacterised protein	V5US45	Oenococcus_phage	3.2e-19	27.6
VED66749.1\|508607_508913_-	Uncharacterised protein	NA	NA	NA	NA
VED66750.1\|508893_509265_-	Uncharacterised protein	A0A1B0RXA8	Streptococcus_phage	1.8e-13	40.2
VED66751.1\|509261_510674_-	DNA-directed DNA polymerase IV	Q6DMX4	Streptococcus_phage	1.2e-177	66.5
VED66752.1\|510676_511354_-	Transcriptional regulator, SOS-response transcriptional repressor	A0A1B0RXB1	Streptococcus_phage	1.6e-52	47.8
VED66753.1\|511536_512076_+	methyltransferase	NA	NA	NA	NA
VED66754.1\|512065_512539_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	7.1e-15	29.1

DBSCAN-SWA_4

1216849 : 1228740

Staphylococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED67452.1\|1216849_1218385_-	putative ABC transporter, ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.5e-18	32.9
VED67453.1\|1218522_1219578_-	lipoprotein	A0A0A7DN02	Lactobacillus_phage	6.6e-53	37.0
VED67454.1\|1219656_1220046_-	cytidine deaminase	NA	NA	NA	NA
VED67455.1\|1220032_1220695_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
VED67456.1\|1220717_1221995_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	1.9e-115	54.7
VED67457.1\|1221991_1222585_-	methyltransferase domain-containing protein	NA	NA	NA	NA
VED67458.1\|1222680_1223601_+	pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	1.9e-35	36.0
VED67459.1\|1223722_1223956_+	30S ribosomal protein S20	NA	NA	NA	NA
VED67460.1\|1224021_1224552_+	DNA topology modulation protein FlaR	A0A097BYE2	Leuconostoc_phage	1.7e-25	40.0
VED67461.1\|1224578_1225157_-	TetR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	2.2e-18	49.1
VED67462.1\|1225284_1226127_+	DegV family protein	A0A1X9I5J4	Streptococcus_phage	5.8e-100	66.2
VED67463.1\|1226360_1228007_-	ABC transporter membrane protein	NA	NA	NA	NA
VED67464.1\|1227996_1228740_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-26	27.6

DBSCAN-SWA_5

1420909 : 1436098

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VED67634.1\|1420909_1423177_-	DNA segregation ATPase FtsK	S5VNE3	Mycobacterium_phage	8.3e-85	49.2
VED67635.1\|1423364_1423649_-	Uncharacterised protein	NA	NA	NA	NA
VED67636.1\|1423803_1424724_-	Uncharacterised protein	NA	NA	NA	NA
VED67637.1\|1424787_1425570_-	Uncharacterised protein	NA	NA	NA	NA
VED67638.1\|1425763_1426588_+	cyclophilin type peptidyl-prolyl cis-trans isomerase	A0A1V0S9I2	Catovirus	4.1e-18	35.1
VED67639.1\|1426621_1428163_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.4e-51	27.3
VED67640.1\|1428247_1428601_-	Arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.9e-36	60.7
VED67641.1\|1428610_1429135_-	methylated-DNA-protein-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	4.5e-18	31.2
VED67642.1\|1429091_1429664_-	GNAT family acetyltransferase	M1PSC3	Streptococcus_phage	6.3e-58	57.8
VED67643.1\|1429653_1430538_-	tetrapyrrole methylase	M1PLC5	Streptococcus_phage	5.3e-112	71.1
VED67644.1\|1430540_1430861_-	initiation-control protein YabA	M1PFV3	Streptococcus_phage	1.8e-30	65.1
VED67645.1\|1430865_1431765_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.2e-80	53.4
VED67646.1\|1431761_1432400_-	thymidylate kinase	M1PSC7	Streptococcus_phage	3.0e-72	63.6
VED67647.1\|1432572_1433460_+	YitT family protein	M1Q1P6	Streptococcus_phage	8.3e-81	51.5
VED67648.1\|1433616_1434273_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	4.5e-84	76.4
VED67649.1\|1434623_1435334_-	branched-chain amino acid transport protein	G9BWD6	Planktothrix_phage	2.3e-17	28.1
VED67650.1\|1435333_1436098_-	branched-chain amino acid ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-15	25.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage