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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134286 Legionella oakridgensis strain NCTC11531 genome assembly, chromosome: 1 1 crisprs DEDDh,RT,cas3,WYL,DinG,csa3,PD-DExK 0 0 11 0

Results visualization

1. LR134286
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134286_1 1162502-1162593 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27193 : 39811 14 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_2 77662 : 117766 43 Escherichia_phage(33.33%) transposase,protease,integrase attL 69747:69762|attR 113897:113912
DBSCAN-SWA_3 1450807 : 1528977 58 Tupanvirus(25.0%) transposase,protease,tRNA,integrase attL 1509554:1509571|attR 1529402:1529419
DBSCAN-SWA_4 2134533 : 2262388 115 Escherichia_phage(26.32%) integrase,protease,transposase,holin attL 2133467:2133485|attR 2274001:2274016
DBSCAN-SWA_5 2396699 : 2403516 9 Acinetobacter_phage(42.86%) NA NA
DBSCAN-SWA_6 2563599 : 2618847 41 Lactococcus_phage(16.67%) transposase NA
DBSCAN-SWA_7 2994036 : 3003286 6 Bacillus_phage(16.67%) protease NA
DBSCAN-SWA_8 3186980 : 3237464 43 Caldibacillus_phage(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_9 3427718 : 3505090 60 Staphylococcus_phage(22.22%) integrase,protease,transposase attL 3429159:3429173|attR 3439465:3439479
DBSCAN-SWA_10 3772557 : 3821849 49 Vibrio_phage(12.5%) transposase,tRNA,holin,integrase attL 3787007:3787024|attR 3824249:3824266
DBSCAN-SWA_11 3835823 : 3866361 34 Bacillus_phage(28.57%) transposase,integrase attL 3826229:3826244|attR 3858726:3858741
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage