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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134294 Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1 2 crisprs cas3,DinG,DEDDh,RT 0 0 13 0

Results visualization

1. LR134294
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134294_1 1161750-1161835 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134294_2 1755217-1755312 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 108076 : 169460 52 Staphylococcus_phage(33.33%) bacteriocin,transposase,protease,tRNA NA
DBSCAN-SWA_2 257590 : 368162 107 Streptococcus_phage(12.9%) transposase,integrase,tRNA,protease attL 349195:349254|attR 351600:352141
DBSCAN-SWA_3 379660 : 436249 60 Streptococcus_phage(40.0%) transposase,tRNA,integrase,holin,protease attL 435847:435862|attR 436415:436430
DBSCAN-SWA_4 446203 : 551485 108 Streptococcus_phage(24.0%) transposase,tRNA NA
DBSCAN-SWA_5 580003 : 707701 116 Bacillus_virus(10.34%) bacteriocin,transposase,tRNA,holin,protease NA
DBSCAN-SWA_6 729734 : 764435 40 Staphylococcus_phage(33.33%) transposase,bacteriocin,holin,protease NA
DBSCAN-SWA_7 834507 : 886788 60 Bacillus_virus(15.0%) transposase,holin,tRNA NA
DBSCAN-SWA_8 952281 : 998699 53 Streptococcus_phage(23.53%) transposase,tRNA,protease NA
DBSCAN-SWA_9 1225445 : 1277671 45 Streptococcus_phage(33.33%) transposase,holin,integrase attL 1232001:1232017|attR 1241225:1241241
DBSCAN-SWA_10 1448810 : 1586309 120 Bacillus_phage(21.05%) holin,transposase,protease,tRNA NA
DBSCAN-SWA_11 1600779 : 1711689 113 Streptococcus_phage(68.92%) bacteriocin,tail,transposase,tRNA,integrase,capsid,terminase,holin,portal,protease,head attL 1647606:1647626|attR 1682267:1682287
DBSCAN-SWA_12 1921086 : 1967420 45 Pneumococcus_phage(20.0%) integrase,transposase,protease attL 1912748:1912778|attR 1959332:1959362
DBSCAN-SWA_13 1982613 : 2029792 39 Aeribacillus_phage(16.67%) holin,transposase,integrase,tRNA attL 2012705:2012720|attR 2020041:2020056
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage