CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134320	Streptococcus mutans strain NCTC10832 genome assembly, chromosome: 1	2 crisprs	DEDDh,cas3,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	1	29	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134320_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134320_1

1647055-1648543

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CRT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CRISPRCasFinder
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	PILER-CR
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	PILER-CR

22 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LR134320_1

>merge|LR134320|1|1647055-1648543|CRT,CRISPRCasFinder,PILER-CR,PILER-CR
GTTTTAGTAAATCAGTAACTAACATGGCTCTAAAACATGTGCCGCCTTTACGGATTATATATGCCGATTTTGGAACCATTCGAAACAACACAGCTCTAAAACAAACGTGGCTGGTACTTCAGGACGCAAATAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACATAGACACATTCATCAATGCCCATGTAGTTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACACTGCGCAAGTTGAGAAAAAGATTGGTCGAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACTCAACTGGATGCTGGTTCGATAATAGTACGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACAATATTCAACGGATACCAGTTAATAATGGAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGCATTATAGATAATATGTAATTCATATCCGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGTGCCTGGTGTGGCATCGTCATTAAGCTTGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGAAATTACCTCTGAAATGTGGGGCACTAAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACATTAAATCTCAGATTGCCATTCGCTTTATCGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGAAAGAAGGTGATTAATTGGTAAAATATGTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACAAAAGGGATTGCTGATGGGAACCATAATAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACACCTGACTAATCAAGAGCAAGAATGGAAAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGTCCCACTGTCCTTGCTGTCGCTTCCTGATGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCAGTATGATTAAAGAGCTGACAAAAGACAGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACACTCCGAAATTCCCAAAACTTGCCTCTGCTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGACGAGATGATAGCGCTAGAGTTTAAAGAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACTACGACAGAGAGCTAGCAGAGGCAAGTTTTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCTTTGGCGACTTTACAAGTCTTGTCCGCAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGATATGCTGTTTCTGGTTCTAACGCTTATCGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACAAGATATCGTTACCATTAGCCGCCCAAACAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACATTAAGGGTATGATTTGATGAAATTCATTGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

>LR134320|1|1|1647055-1648543|CRT
GTTTTAGTAAATCAGTAACTAACATGGCTCTAAAAC	ATGTGCCGCCTTTACGGATTATATATGCCG
ATTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAACGTGGCTGGTACTTCAGGACGCAAATAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATAGACACATTCATCAATGCCCATGTAGTT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTGCGCAAGTTGAGAAAAAGATTGGTCGA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TCAACTGGATGCTGGTTCGATAATAGTACG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AATATTCAACGGATACCAGTTAATAATGGA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GCATTATAGATAATATGTAATTCATATCCG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GTGCCTGGTGTGGCATCGTCATTAAGCTTG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GAAATTACCTCTGAAATGTGGGGCACTAAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATTAAATCTCAGATTGCCATTCGCTTTATC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GAAAGAAGGTGATTAATTGGTAAAATATGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAAAGGGATTGCTGATGGGAACCATAATAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACCTGACTAATCAAGAGCAAGAATGGAAAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GTCCCACTGTCCTTGCTGTCGCTTCCTGAT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGTATGATTAAAGAGCTGACAAAAGACAG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTCCGAAATTCCCAAAACTTGCCTCTGCT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GACGAGATGATAGCGCTAGAGTTTAAAGAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TACGACAGAGAGCTAGCAGAGGCAAGTTTT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CTTTGGCGACTTTACAAGTCTTGTCCGCAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GATATGCTGTTTCTGGTTCTAACGCTTATC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAGATATCGTTACCATTAGCCGCCCAAACA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATTAAGGGTATGATTTGATGAAATTCATTG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

>LR134320|1|1|1647121-1648543|CRISPRCasFinder
ATTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAACGTGGCTGGTACTTCAGGACGCAAATAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATAGACACATTCATCAATGCCCATGTAGTT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTGCGCAAGTTGAGAAAAAGATTGGTCGA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TCAACTGGATGCTGGTTCGATAATAGTACG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AATATTCAACGGATACCAGTTAATAATGGA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GCATTATAGATAATATGTAATTCATATCCG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GTGCCTGGTGTGGCATCGTCATTAAGCTTG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GAAATTACCTCTGAAATGTGGGGCACTAAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATTAAATCTCAGATTGCCATTCGCTTTATC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GAAAGAAGGTGATTAATTGGTAAAATATGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAAAGGGATTGCTGATGGGAACCATAATAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACCTGACTAATCAAGAGCAAGAATGGAAAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GTCCCACTGTCCTTGCTGTCGCTTCCTGAT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGTATGATTAAAGAGCTGACAAAAGACAG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTCCGAAATTCCCAAAACTTGCCTCTGCT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GACGAGATGATAGCGCTAGAGTTTAAAGAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TACGACAGAGAGCTAGCAGAGGCAAGTTTT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CTTTGGCGACTTTACAAGTCTTGTCCGCAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GATATGCTGTTTCTGGTTCTAACGCTTATC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAGATATCGTTACCATTAGCCGCCCAAACA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATTAAGGGTATGATTTGATGAAATTCATTG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

>LR134320|1|1|1647122-1647553|PILER-CR
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAACGTGGCTGGTACTTCAGGACGCAAATAAG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATAGACACATTCATCAATGCCCATGTAGTTG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTGCGCAAGTTGAGAAAAAGATTGGTCGAG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TCAACTGGATGCTGGTTCGATAATAGTACGG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AATATTCAACGGATACCAGTTAATAATGGAG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GCATTATAGATAATATGTAATTCATATCCGG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAACGTGCCTGGTGTGGCATCGTCATTAAGCTTGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGAAATTACCTCTGAAATGTGGGGCACTAAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACATTAAATCTCAGATTGCCATTCGCTTTATCGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGAAAGAAGGTGATTAATTGGTAAAATATGTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACAAAAGGGATTGCTGATGGGAACCATAATAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACACCTGACTAATCAAGAGCAAGAATGGAAAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGTCCCACTGTCCTTGCTGTCGCTTCCTGATGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCAGTATGATTAAAGAGCTGACAAAAGACAGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTCCGAAATTCCCAAAACTTGCCTCTGCT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GACGAGATGATAGCGCTAGAGTTTAAAGAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TACGACAGAGAGCTAGCAGAGGCAAGTTTT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CTTTGGCGACTTTACAAGTCTTGTCCGCAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GATATGCTGTTTCTGGTTCTAACGCTTATC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAGATATCGTTACCATTAGCCGCCCAAACA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATTAAGGGTATGATTTGATGAAATTCATTG


>LR134320|1|2|1648046-1648543|PILER-CR
	AAACGTGGCTGGTACTTCAGGACGCAAATAAG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATAGACACATTCATCAATGCCCATGTAGTTG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTGCGCAAGTTGAGAAAAAGATTGGTCGAG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TCAACTGGATGCTGGTTCGATAATAGTACGG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AATATTCAACGGATACCAGTTAATAATGGAG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GCATTATAGATAATATGTAATTCATATCCGG
TTTTGGAACCATTCGAAACAACACAGCTCTAAAACGTGCCTGGTGTGGCATCGTCATTAAGCTTGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGAAATTACCTCTGAAATGTGGGGCACTAAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACATTAAATCTCAGATTGCCATTCGCTTTATCGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGAAAGAAGGTGATTAATTGGTAAAATATGTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACAAAAGGGATTGCTGATGGGAACCATAATAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACACCTGACTAATCAAGAGCAAGAATGGAAAAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGTCCCACTGTCCTTGCTGTCGCTTCCTGATGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCAGTATGATTAAAGAGCTGACAAAAGACAGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACTCCGAAATTCCCAAAACTTGCCTCTGCT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GACGAGATGATAGCGCTAGAGTTTAAAGAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TACGACAGAGAGCTAGCAGAGGCAAGTTTT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CTTTGGCGACTTTACAAGTCTTGTCCGCAA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GATATGCTGTTTCTGGTTCTAACGCTTATC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAGATATCGTTACCATTAGCCGCCCAAACA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATTAAGGGTATGATTTGATGAAATTCATTG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134320.1\|VEF19401.1\|1646078_1646972_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|119397
LR134320.1\|VEF19408.1\|1655671_1656538_-\|NADPH-dependent-FMN-reductase	unknown	unknown	gnl\|CDD\|377026
LR134320.1\|VEF19394.1\|1638870_1639479_-\|signal-peptide	unknown	unknown	unknown
LR134320.1\|VEF19393.1\|1638149_1638806_+\|membrane-protein	unknown	unknown	unknown
LR134320.1\|VEF19392.1\|1636188_1637829_-\|phosphoenolpyruvate-carboxykinase	unknown	unknown	gnl\|CDD\|236471
LR134320.1\|VEF19400.1\|1645478_1645763_-\|putative-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
LR134320.1\|VEF19402.1\|1648696_1649074_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family	unknown	unknown	gnl\|CDD\|374224
LR134320.1\|VEF19397.1\|1640969_1642805_-\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
LR134320.1\|VEF19410.1\|1657647_1659138_+\|reductase	unknown	unknown	gnl\|CDD\|180854
LR134320.1\|VEF19406.1\|1650372_1651239_-\|CRISPR-associated-protein-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LR134320.1\|VEF19407.1\|1651238_1655291_-\|CRISPR-associated-protein-csn1	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LR134320.1\|VEF19395.1\|1639558_1640035_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|366181
LR134320.1\|VEF19398.1\|1643041_1643170_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134320.1\|VEF19403.1\|1649091_1649283_-\|toxin-antitoxin-system,-HicA-family-protein	unknown	unknown	gnl\|CDD\|377942
LR134320.1\|VEF19396.1\|1640113_1640941_-\|alpha/beta-fold-family-hydrolase	unknown	unknown	gnl\|CDD\|223669
LR134320.1\|VEF19411.1\|1659147_1660323_+\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|341026
LR134320.1\|VEF19409.1\|1656645_1657524_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
LR134320.1\|VEF19399.1\|1643564_1645316_-\|Glucan-binding-protein-C	unknown	unknown	gnl\|CDD\|369832
LR134320.1\|VEF19405.1\|1650031_1650376_-\|CRISPR-associated-protein-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LR134320.1\|VEF19404.1\|1649379_1650042_-\|CRISPR-associated-protein-csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408

Protein	Function_ID	Function_description	E-value
LR134320.1\|VEF19401.1\|1646078_1646972_+\|transcriptional-regulator	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	1.55409e-23
LR134320.1\|VEF19408.1\|1655671_1656538_-\|NADPH-dependent-FMN-reductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	9.21475e-38
LR134320.1\|VEF19411.1\|1659147_1660323_+\|major-facilitator-superfamily-protein	gnl\|CDD\|341026	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily. This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.38686e-51
LR134320.1\|VEF19392.1\|1636188_1637829_-\|phosphoenolpyruvate-carboxykinase	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	4.15747e-12
LR134320.1\|VEF19400.1\|1645478_1645763_-\|putative-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.00976e-07
LR134320.1\|VEF19402.1\|1648696_1649074_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	2.66065e-14
LR134320.1\|VEF19397.1\|1640969_1642805_-\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LR134320.1\|VEF19410.1\|1657647_1659138_+\|reductase	gnl\|CDD\|180854	PRK07121, PRK07121, FAD-binding protein.	6.20453e-42
LR134320.1\|VEF19406.1\|1650372_1651239_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.88856e-129
LR134320.1\|VEF19407.1\|1651238_1655291_-\|CRISPR-associated-protein-csn1	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LR134320.1\|VEF19395.1\|1639558_1640035_-\|acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.46244e-16
LR134320.1\|VEF19404.1\|1649379_1650042_-\|CRISPR-associated-protein-csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.55029e-116
LR134320.1\|VEF19403.1\|1649091_1649283_-\|toxin-antitoxin-system,-HicA-family-protein	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.38968e-15
LR134320.1\|VEF19396.1\|1640113_1640941_-\|alpha/beta-fold-family-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.19512e-07
LR134320.1\|VEF19409.1\|1656645_1657524_-\|transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	7.84875e-21
LR134320.1\|VEF19399.1\|1643564_1645316_-\|Glucan-binding-protein-C	gnl\|CDD\|369832	pfam08363, GbpC, Glucan-binding protein C. This domain is found in the Streptococcus Glucan-binding protein C (GbpC) and also in surface protein antigen (Spa)-family proteins which show sequence similarity to GbpC.	1.80859e-109
LR134320.1\|VEF19405.1\|1650031_1650376_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.91246e-50

>LR134320.1|VEF19401.1|1646078_1646972_+|transcriptional-regulator
MGRGKLTPQDLEAMKAISANLQRLLAESGMKQSHLATILNIPTSSLNEYVKGKSLPKIGNIQKIADYFGLQKSDIDPRFASKKDSSTLDKINHIAKQLEMKRQIKVLDFCYQQSKEQDETASLSASDETTDDKVADKSNHTQYQKVVDSFIAKELNDQTIIHWDNVIKAKDLYQTFGRQYENIQIYGEVSAGTGIWVGHEKQETIKYPIPIPEHDIALTVNGNSMEPLFYNGDVIFVKKTKAIHHGQIIVVIVNNEAYVKKLYRKNKEIRLISLNPDYDDIILKEDDTIEVIGTVIT
>LR134320.1|VEF19400.1|1645478_1645763_-|putative-transcriptional-regulator
MQFVWESNGKLKGDAEVEKLTLRALRVNYSLSPKEVADCLGIPQHTLLRYEEDSSEIPIQLANDLANYYDISLDSIFFGKNSDLKQKFKNKNNR
>LR134320.1|VEF19399.1|1643564_1645316_-|Glucan-binding-protein-C
MKSKTAKITLLSSLALAAFGATNVFADEASTQLNSDTVAAPTADTQASEPAATEKEQSPVVTVVESHTQGNTTTTTSQVTSKELEDAKANANQEGLEVTETETQKQPSVEAADADNKAQAQTINTAVADYQKAKAEFPQKQEQYNKDFEKYQSDVKEYEAQKAAYEQYKKEVAQGLASGRVEKAQGLVFINEPEAKLSIEGVNQYLTKEARQKHATEDILQQYNTDNYTAADFTQANPYDPKEDTWFKMKVGDQISVTYDNIVNSKYNDKKISKVKINYTLNSSTNNEGSALVNLFHDPTKTIFIGAQTSNAGRNDKISVTMQIIFYDENGNEIDLSGNNAIMSLSSLNHWTTKYGDHVEKVNLGDNEFVKIPGSSVDLHGNEIYSAKDNQYKANGATFNGDGADGWDAVNADGTPRAATAYYGAGAMTYKGEPFTFTVGGNDQNLPTTIWFATNSAVAVPKDPGAKPTPPEKPELKKPTVTWHKNLVVETKTEEVPPVTPPTTPDEPTPEKPKTPEDPQSPVVAKSVSFRTARKGEMRVRERDYQPTLPHTGAAKQNGLATLGAISTAFAAATLIAARKKEN
>LR134320.1|VEF19398.1|1643041_1643170_-|Uncharacterised-protein
MTDQELEHLIVTELESKRLDFTYSKDITEFFDEAFPEYDQNY
>LR134320.1|VEF19397.1|1640969_1642805_-|GTP-binding-protein-LepA
MTIEQLKNRQEKIRNFSIIAHIDHGKSTLADRILEQTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYKAKNGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRTEIEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPKGDVEAPLKALIFDSVYDAYRGVILQIRVMDGMVKPGDKIELMSNGKTFDVTEVGIFTPKAVNRDFLATGDVGYLAASIKTVADTRVGDTVTLADCPAEAPLHGYKQLNPMVFAGIYPIDSSKYNDLREALEKLQLNDASLHFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVYTTDGERLEVSNPSEFPEPTKVDSIEEPYVKAQIMVPQEYVGAVMELSQRKRGDFVTMDYIDNNRVNVIYQIPLAEIVFDFFDRLKSSTRGYASFDYDISEYRKSKLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDDDDKKK
>LR134320.1|VEF19396.1|1640113_1640941_-|alpha/beta-fold-family-hydrolase
MAALNKEMVNTLLGPIYTCHREGNPCLVFLSGAGFFSTADNFANIVDQLPDNIGILTIDSPNSGYSPVSNQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALHIINQSSKACLGFIGLEPTTAMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRRLNDSQSLPDFKIRLALGEEDFKTVISEKVPSIVFSESFREKEYLESEYLNKHTQTKLILCGQHHYLHWSETNSILKKAKQLLSNDEKL
>LR134320.1|VEF19395.1|1639558_1640035_-|acetyltransferase
MSIRLAQVTDIPVLKELLNQIFQVHQTVGPDLFKNTDKGSKYSETELKELLQDESKPIFVYTDGKNRVLGHLFLVIKETKGSSVSKPLKTLFIDDLCVSKEARGQKIGQELFEFALKYAKKLGCYDLTLNVWNDNKGALAFYERQGLKARETKMEKIL
>LR134320.1|VEF19394.1|1638870_1639479_-|signal-peptide
MPRRRASRRKSKKKAVFSILLTGITLIIIGLAVYFISAYFTNTKKTANKEKTQTHIVNPKKDPEEKKEADSASKATSKFDLTTIATGDYSSAAGTWQNELGDQLKFNASGLESATIQNATDFTISSGQATNDGLYQATLTSADSTVVYNLLFVKGGTAIPENYFTTGYSDTSDTSRDRLYISSQTTFGSDDFSKGIFYKSEN
>LR134320.1|VEF19393.1|1638149_1638806_+|membrane-protein
MSKTQAFRSLIALLGLIGVSIQIKQSGWGMLLYYTTLSNVIVFSFLTYLVIKEKRNGSINSDPKLLRLKGGVTMTIMITFMVYHFLLAPKVRSYDYYTIRNFLVHYIVPLSTIFDTLICDRRKIYRWFDPIIWTCLPLLYFGFALINGLLLKWPIPGTADSPFPYFFINMNKYGAQQVLINALVIALLYLLFGYILLGIKQMIGQKRQVTDNSSLNMS
>LR134320.1|VEF19392.1|1636188_1637829_-|phosphoenolpyruvate-carboxykinase
MVTRQHFSEDSMRKNNSYFSALKATIETAFYENHVVPLKELAEAYRLAAKSPNTIVLDTPVAHAEDLGLPKDAKILLENSGGIVGRTAKARRIFGQDSKEDAKILQIIREAIFQARHRTFYRADAVVGLDEAFMLRAHLMVPQDDINNLYSWLNNFQVLNDTYRERLKKSKRYEETDIYIFSDPEWSHPDYPDGLVYFDTNHNCAAILGLHYFGELKKATLTLAWGTANRNKYVACHGGLKIFEKEGQKPYVASFFGLSGSGKSTLTHAKHNGKYRIDVLHDDAFVISEEDGSTIALEPAYFDKTNDYPAGHREQKYFVAVQNCGAALDKEGHLRLVTEDIRNGNGRTIKSRFSTPNRVDRINHPIQSIFWIMKDDSLPPLIRVTDPIMASTMGCTLVTTRSTAENTTDSLDTLIIEPYANPFRVYPLVEDYIKFQHLFESGVNCYIINTGSYLGQDIPKETTLDVIEQVVDGTAKFEPFGSVEGFEYLSSSHYKIPNFDKAYVKIIRQRMKIRLQYLEAFNRKNPKLSLPDEAISHLKDVLANLG
>LR134320.1|VEF19402.1|1648696_1649074_-|toxin-antitoxin-system,-antitoxin-component,-HicB-family
MLKSYPAIFHKEEEGYWVEFPEFGGGTQGEDLEEAMKNARQMLESVLASYLDEGMKLPNPSEIRKLSVEDGFATMIQADPNPYLKNNKAIRKNVTVPEWLVQLADRDQVNYSEVLTKALEKKLQL
>LR134320.1|VEF19403.1|1649091_1649283_-|toxin-antitoxin-system,-HicA-family-protein
MPLTGKELARLAINNGWEEVRVRGSHHHFKKDGVPYIVTIPIHGNKVLKIGLEKKLLRDLNLL
>LR134320.1|VEF19404.1|1649379_1650042_-|CRISPR-associated-protein-csn2
MKLNFPILDEPITLEKSTILVLEDVQVFAQMVRNLYQYDEDSELKFFNRKFKSLKPSELMLVTDILGYDVNAPSLLKLVHADLENQFNEKPEVKSMVEKLANTITELIAYECLENELDLEYDEITILELIKALGVKIETQSDTIFEKMFEVLQVYKYLNKKKLLVFINTLSYFKREEIAQILEYIHLSDMVVLFLEPRKIDGFAQYILDEDYFLITESNN
>LR134320.1|VEF19405.1|1650031_1650376_-|CRISPR-associated-protein-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNSANTAMIARLKENNPKKGNITLLTVTEKQFARMIYLNGERDTSIANSDSRLVFLGEAFPNET
>LR134320.1|VEF19406.1|1650372_1651239_-|CRISPR-associated-protein-Cas1
MGWRTVVVNTHSKLSYKNNHLIFKDTYQTEMIHLSEIDILLLETTDIVLSTMLVKRLVDENILLIFCDDKRLPTAMLMPYYARHDSSLQLNNQISWAEEVKCDVWTTIIAQKILNQSCYLGECSYFEKSQSIMDLYHDLEPFDPSNREGHSARIYFNTLFGNDFSREQDNDINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPIVDRIVYENRNNSFIKIKRELFSMFSDTYLYNNKEMYLTNIVSDYTKKVIKALNNDGKGVPEFRI
>LR134320.1|VEF19407.1|1651238_1655291_-|CRISPR-associated-protein-csn1
MKKPYSIGLDIGTNSVGWAVVTDDYKVPAKKMKVLGNTDKSHIEKNLLGALLFDSGNTAEDRRLKRTARRRYTRRRNRILYLQEIFSEEMGKVDDSFFHRLEDSFLVTEDKRGERHPIFGNLEEEVKYHENFPTIYHLRQYLADNPEKVDLRLVYLALAHIIKFRGHFLIEGKFDTRNNDVQRLFQEFLAVYDNTFENSSLQEQNVQVEEILTDKISKSAKKDRVLKLFPNEKSNGRFAEFLKLIVGNQADFKKHFELEEKAPLQFSKDTYEEELEVLLAQIGDNYAELFLSAKKLYDSILLSGILTVTDVGTKAPLSASMIQRYNEHQMDLTQLKQFIRQKLSDKYNEVFSDVSKDGYAGYIDGKTNQEAFYKYLKGLLNKIEGSGYFLDKIEREDFLRKQRTFDNGSILHQIHLQEMRAIIRRQAEFYPFLADNQDRIEKILTFRIPYYVGPLARGKSDFAWLSRKSADKITPWNFDEIVDKESSAEAFINRMTNYDLYLPNQKVLPKHSLLYEKFTVYNELTKVKYKTEQGKTAFFDANMKQEIFDGVFKVYRKVTKDKLMDFLEKEFDEFRIVDLTGLDKENKAFNASYGTYHDLRKILDKDFLDNSKNEKILEDIVLTLTLFEDREMIRKRLKNYSDLLTKEQLKKLERRHYTGWGRLSAELIHGIRNKESRKTILDYLIDDGNSNRNFMQLINDDALSFKEEIAKAQVIGETDNLNQVVSDIAGSPAIKKGILQSLKIVDELVKIMGHQPENIVVEMARENQFTNQGRQNSQQRLKGLTDSIKEFGSQILKEHPVENSQLQNDRLFLYYLQNGRDMYTGEELDIDYLSQYDIDHIIPQAFIKDNSIDNRVLTSSKENRGKSDDVPSEDVVNRMRPFWNKLLSSGLISQRKYNNLTKKELTLDDKAGFIKRQLVETRQITKHVARMLDERFNKEFDDNNKRIRKVKIVTLKSNLVSSFRKEFELYKVREINDYHHAHDAYLNAVVVKALLVKYSKLEPEFVYGEYPKYNSYRERKTATQKMFFYSNIMNMFKSKVKLADDQIVERPMIEVNDETGEIAWDKTKHITTVKKVLSYPQVNIVKKVEEQTIGQNGGLFDDNPKSPLEVIPSKLVPLKKALNPEKYGGYQKPTTAYPILLIVDTKQLIPISVMDKKRFEQNPVKFLKDKGYQQIEKNNFVKLPKYTLVDIGNGIKRLWASSKEVHKGNQLVVSKKSQDLLYHAHHLDNDYSNEYVKNHYQQFDILFNEITSFSKKCKLGKEHIQKIEEAYSKERDSASIEELADGFIKLLGFTQLGATSPFSFLGIKLNQKQYTGKKDYLLPCMEATLIHQSITGLYETRIDLSKLGGD
>LR134320.1|VEF19408.1|1655671_1656538_-|NADPH-dependent-FMN-reductase
MKLVAIVGSNASFSYNRLLLQFIKERFGQAFALEILEIKELPLFNQDSSAADCPLIQKLNEDILNADGIIIATAEHNQTITASLKSMLEWLSYQLHPFKNKPVMIVGASYYNQGTSHAQEHLRQILNAPGLDAWVMSGNEFFLGNASEVFDENNQIKDDDTVIYLAQCLQRFIRYVTVVQELKGDSIQLSDAISGASESVQEDSATSAMLEKQLSLQKKETNTPFERALDKTYGPALKDTLEDPFDKDLDAQYKAIKKQPIPFEKALDNIFGKDLGIETTDPLDNLLR
>LR134320.1|VEF19409.1|1656645_1657524_-|transcriptional-regulator
MVRFISNTLSQTLNEPFQQSHKSCKHLYILEILSQVVIVSDQKQVPLQPYDIILAQSFNHLQIDSLDRNPILLRLYSLDFDLPSPLNQYTVGDNPLIHDLMNDHTSEDAYILFTNLSDLICHAYLDALEKLENLRDNNDEQVYIDFQRQKLAGLLFTELLRQHDAKVSKFASRFPSVNVKYASKDSQSGAIMKYVSDNVHHISLKEAAAHFSYQANYFSRLCHDLFGISFNQLKTTIRLEIAKEQLRLTTKSVEEISQELGYKAVSNFHRNFKSQTGMTPNDYRQDKQWKDT
>LR134320.1|VEF19410.1|1657647_1659138_+|reductase
MEKEYKVDVVVAGAGGAGLAAAHAAAQNGLKVLVLEKLKRIGGNTRISSGFFAINTKEQNAAGLKLSTQEAIRQLQEHNHFLSNGALLKNIIEHAKETLEEIEKLGMEIKLNPTKNSTQFAHFGNDYQGGSYHMYMNKDSSYLQIQKSLEAMGVTFIFGVRMTELLQDSNGHVRGLKALNDAGESMTVHAKASIITTGGFGGDKRRVAKVMRTLNLRTLGVPNMGEGLSAMEAAGGVNIDGSALIHAAQMAQSTVTQETKGKQLAGFNDSPLTQLLLSPLLWVDPNGSRFTNEDVVYDTVQWSNAAYGVGSKYYYVMDTATLESYTKQPLLTISKSGPGASQAKGDFVSLAEQAVQQGIAFKGDSLEELAQNSGMDPIAFKATVAEYNKAIANQNDEIFSKSASSLKYDVKKGPFYAFIAQVVYLGTVGGVRVDKDLRVLDAYMKAIPGLYTGGANAGGYYAPRNYPAYEGLASGFSWTSGRLAGLAAANDIKKYN
>LR134320.1|VEF19411.1|1659147_1660323_+|major-facilitator-superfamily-protein
MNQKNLSPSSWFFKISVLSLSILAMTAPSISIANNLLQKTFTQQSTAEIEMISTLPNFGVLLLILFADTIANKFGIKRTIMAGLLMYLLGGVLPAFIPNYYAIVFLRFLMGCGIGLFNPFSVSLMYRFYKDQELSDMLGFQNTGQNLGNAGFGFLLGALVLAGWKVAFMGYFIALIPLILFGAFVVIPDDQPTIKKERPKLADSINGHILLLALLFLIIFGMFMMMTIKMALFGAETGLISASAASSILAVLGLSSMFSAIAFGKLSKRVGNFMLPISLTGIAMGFFIVASASNAAMVVLGVIIAGIFFGWVFPQAFLRAAQVSPKEGGTLTTSVILMGINLGAFLSPSVVNFVANLLGNKTAASVLAMCGWGFALLAILEYLYTFFNQRT

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Crispr_ID: LR134320_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134320_2

1750112-1751849

TypeI-E

Consensus_repeat	Method
AGGATCACCCCCGCTCGTGCGGGTAAAAT	PILER-CR
GGATCACCCCCGCTCGTGCGGGTAAAAT	CRISPRCasFinder
GGATCACCCCCGCTCGTGCGGGTAAAAT	CRT
GGATCACCCCCGCTCGTGCGGGTAAAAT	PILER-CR

28 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL

The CRISPR arrays of LR134320_2

>merge|LR134320|2|1750112-1751849|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GGATCACCCCCGCTCGTGCGGGTAAAATATTGAGAGACGCTATAGAATTTCTAGAAACTCAGGATCACCCCCGCTCGTGCGGGTAAAATGTCTATTTCATTGTATTTCTCATCGTTCAGTTAGGATCACCCCCGCTCGTGCGGGTAAAATTCGCAAAATCCCGCTGATTATAAGTGGATAGCAGGATCACCCCCGCTCGTGCGGGTAAAATTTTGCAAGCTCTTGCTGTACTGAAGTCAAGCCGGGATCACCCCCGCTCGTGCGGGTAAAATGTGGATAACCGATGAAACTTAAAAAAATATTAGGGATCACCCCCGCTCGTGCGGGTAAAATCATAAGATTTGCAATTTACTAATATAGAGTAATAGGATCACCCCCGCTCGTGCGGGTAAAATGTTCCATCAGCATAGCTTTTGTGCTTTCACTGAGGATCACCCCCGCTCGTGCGGGTAAAATCATCTAACGAGATTTTGAAAGAATATCCAACCGGGATCACCCCCGCTCGTGCGGGTAAAATTCGAGTCTTTGTTAGATAGCAGCCCTTACGAACAGGATCACCCCCGCTCGTGCGGGTAAAATAATCCCCAATTTATCGACCCATGTATCGTGGTAGGATCACCCCCGCTCGTGCGGGTAAAATCAAATCCCGAAAAACTTTAAAGCTTGTTCTGCGGGATCACCCCCGCTCGTGCGGGTAAAATTGTTCAGAAGATGGAACAAAAATATGCAAAATAGGATCACCCCCGCTCGTGCGGGTAAAATTGAAAGACCTGATGAATTGGCGCGTGCTGTTCAGGATCACCCCCGCTCGTGCGGGTAAAATTGTGGGAGATAATCGCAGTTTCACGGTGTATCAGGATCACCCCCGCTCGTGCGGGTAAAATCGGTTAAAGGCTTAGCCAGAAGCTTCTCAACTAGGATCACCCCCGCTCGTGCGGGTAAAATTGTCGGATACATCAACACGTATTCTATCGCCCGGGATCACCCCCGCTCGTGCGGGTAAAATCTTCGTTTAGTCTAGCTCTTACTAGTGATTGTGGGATCACCCCCGCTCGTGCGGGTAAAATAATGCCTCTGTCGAGTCAGGCGCTGTACTTCCAGGATCACCCCCGCTCGTGCGGGTAAAATTTGGTGATATTGCCCGTTACCCATCCAGTTATAGGATCACCCCCGCTCGTGCGGGTAAAATGCTCTTTCCTCGGAACTTTTGCAGGAAACGTAAGGATCACCCCCGCTCGTGCGGGTAAAATCCAGCAAACAAAGCGCCCCGAGCGGGTGACTTGGGATCACCCCCGCTCGTGCGGGTAAAATGCCTAATGGAACTTATTTCCTGCTCGACTTACGGGATCACCCCCGCTCGTGCGGGTAAAATGCTAACTACAATTTGTGCAGGCGCAGAGCCGTAGGATCACCCCCGCTCGTGCGGGTAAAATTCATGCTTACGTTTCAGCGCTTCAGTTTCAGCGGGATCACCCCCGCTCGTGCGGGTAAAATTCAGCGGTGCAATCGATATATTGCGTGTTATTGGGATCACCCCCGCTCGTGCGGGTAAAATTGGTCTGTAACTTGCAAATTAAGCTTAGATTTGGGATCACCCCCGCTCGTGCGGGTAAAATTCTCTTTATCCAAAATGACGGCACAGTGTACGGGGATCACCCCCGCTCGTGCGGGTAAAATTAGCCATCAATGACCAATTCGGGCGCAAGAACAGGATCACCCCCGCTCGTGCGGGTAAAAT

>LR134320|2|3|1750112-1750322|PILER-CR
GGATCACCCCCGCTCGTGCGGGTAAAATA	TTGAGAGACGCTATAGAATTTCTAGAAACTCA
GGATCACCCCCGCTCGTGCGGGTAAAATG	TCTATTTCATTGTATTTCTCATCGTTCAGTTA
GGATCACCCCCGCTCGTGCGGGTAAAATT	CGCAAAATCCCGCTGATTATAAGTGGATAGCA
GGATCACCCCCGCTCGTGCGGGTAAAATTTTGCAAGCTCTTGCTGTACTGAAGTCAAGCCGGGATCACCCCCGCTCGTGCGGGTAAAATGTGGATAACCGATGAAACTTAAAAAAATATTAGGGATCACCCCCGCTCGTGCGGGTAAAATCATAAGATTTGCAATTTACTAATATAGAGTAATAGGATCACCCCCGCTCGTGCGGGTAAAATGTTCCATCAGCATAGCTTTTGTGCTTTCACTGAGGATCACCCCCGCTCGTGCGGGTAAAAT	CATCTAACGAGATTTTGAAAGAATATCCAACCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCGAGTCTTTGTTAGATAGCAGCCCTTACGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATCCCCAATTTATCGACCCATGTATCGTGGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CAAATCCCGAAAAACTTTAAAGCTTGTTCTGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTTCAGAAGATGGAACAAAAATATGCAAAATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGAAAGACCTGATGAATTGGCGCGTGCTGTTCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTGGGAGATAATCGCAGTTTCACGGTGTATCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CGGTTAAAGGCTTAGCCAGAAGCTTCTCAACTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTCGGATACATCAACACGTATTCTATCGCCCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	CTTCGTTTAGTCTAGCTCTTACTAGTGATTGTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATGCCTCTGTCGAGTCAGGCGCTGTACTTCCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TTGGTGATATTGCCCGTTACCCATCCAGTTATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTCTTTCCTCGGAACTTTTGCAGGAAACGTAA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CCAGCAAACAAAGCGCCCCGAGCGGGTGACTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCCTAATGGAACTTATTTCCTGCTCGACTTACG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTAACTACAATTTGTGCAGGCGCAGAGCCGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCATGCTTACGTTTCAGCGCTTCAGTTTCAGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCAGCGGTGCAATCGATATATTGCGTGTTATTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGGTCTGTAACTTGCAAATTAAGCTTAGATTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCTCTTTATCCAAAATGACGGCACAGTGTACGG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TAGCCATCAATGACCAATTCGGGCGCAAGAACA


>LR134320|2|2|1750112-1751849|CRISPRCasFinder
GGATCACCCCCGCTCGTGCGGGTAAAAT	ATTGAGAGACGCTATAGAATTTCTAGAAACTCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GTCTATTTCATTGTATTTCTCATCGTTCAGTTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCGCAAAATCCCGCTGATTATAAGTGGATAGCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TTTGCAAGCTCTTGCTGTACTGAAGTCAAGCCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GTGGATAACCGATGAAACTTAAAAAAATATTAG
GGATCACCCCCGCTCGTGCGGGTAAAAT	CATAAGATTTGCAATTTACTAATATAGAGTAATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GTTCCATCAGCATAGCTTTTGTGCTTTCACTGA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CATCTAACGAGATTTTGAAAGAATATCCAACCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCGAGTCTTTGTTAGATAGCAGCCCTTACGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATCCCCAATTTATCGACCCATGTATCGTGGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CAAATCCCGAAAAACTTTAAAGCTTGTTCTGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTTCAGAAGATGGAACAAAAATATGCAAAATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGAAAGACCTGATGAATTGGCGCGTGCTGTTCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTGGGAGATAATCGCAGTTTCACGGTGTATCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CGGTTAAAGGCTTAGCCAGAAGCTTCTCAACTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTCGGATACATCAACACGTATTCTATCGCCCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	CTTCGTTTAGTCTAGCTCTTACTAGTGATTGTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATGCCTCTGTCGAGTCAGGCGCTGTACTTCCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TTGGTGATATTGCCCGTTACCCATCCAGTTATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTCTTTCCTCGGAACTTTTGCAGGAAACGTAA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CCAGCAAACAAAGCGCCCCGAGCGGGTGACTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCCTAATGGAACTTATTTCCTGCTCGACTTACG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTAACTACAATTTGTGCAGGCGCAGAGCCGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCATGCTTACGTTTCAGCGCTTCAGTTTCAGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCAGCGGTGCAATCGATATATTGCGTGTTATTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGGTCTGTAACTTGCAAATTAAGCTTAGATTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCTCTTTATCCAAAATGACGGCACAGTGTACGG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TAGCCATCAATGACCAATTCGGGCGCAAGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT

>LR134320|2|2|1750112-1751849|CRT
GGATCACCCCCGCTCGTGCGGGTAAAAT	ATTGAGAGACGCTATAGAATTTCTAGAAACTCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GTCTATTTCATTGTATTTCTCATCGTTCAGTTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCGCAAAATCCCGCTGATTATAAGTGGATAGCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TTTGCAAGCTCTTGCTGTACTGAAGTCAAGCCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GTGGATAACCGATGAAACTTAAAAAAATATTAG
GGATCACCCCCGCTCGTGCGGGTAAAAT	CATAAGATTTGCAATTTACTAATATAGAGTAATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GTTCCATCAGCATAGCTTTTGTGCTTTCACTGA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CATCTAACGAGATTTTGAAAGAATATCCAACCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCGAGTCTTTGTTAGATAGCAGCCCTTACGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATCCCCAATTTATCGACCCATGTATCGTGGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CAAATCCCGAAAAACTTTAAAGCTTGTTCTGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTTCAGAAGATGGAACAAAAATATGCAAAATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGAAAGACCTGATGAATTGGCGCGTGCTGTTCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTGGGAGATAATCGCAGTTTCACGGTGTATCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CGGTTAAAGGCTTAGCCAGAAGCTTCTCAACTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTCGGATACATCAACACGTATTCTATCGCCCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	CTTCGTTTAGTCTAGCTCTTACTAGTGATTGTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATGCCTCTGTCGAGTCAGGCGCTGTACTTCCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TTGGTGATATTGCCCGTTACCCATCCAGTTATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTCTTTCCTCGGAACTTTTGCAGGAAACGTAA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CCAGCAAACAAAGCGCCCCGAGCGGGTGACTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCCTAATGGAACTTATTTCCTGCTCGACTTACG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTAACTACAATTTGTGCAGGCGCAGAGCCGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCATGCTTACGTTTCAGCGCTTCAGTTTCAGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCAGCGGTGCAATCGATATATTGCGTGTTATTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGGTCTGTAACTTGCAAATTAAGCTTAGATTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCTCTTTATCCAAAATGACGGCACAGTGTACGG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TAGCCATCAATGACCAATTCGGGCGCAAGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT

>LR134320|2|4|1750540-1751849|PILER-CR
	TTGAGAGACGCTATAGAATTTCTAGAAACTCA
GGATCACCCCCGCTCGTGCGGGTAAAATG	TCTATTTCATTGTATTTCTCATCGTTCAGTTA
GGATCACCCCCGCTCGTGCGGGTAAAATT	CGCAAAATCCCGCTGATTATAAGTGGATAGCA
GGATCACCCCCGCTCGTGCGGGTAAAATTTTGCAAGCTCTTGCTGTACTGAAGTCAAGCCGGGATCACCCCCGCTCGTGCGGGTAAAATGTGGATAACCGATGAAACTTAAAAAAATATTAGGGATCACCCCCGCTCGTGCGGGTAAAATCATAAGATTTGCAATTTACTAATATAGAGTAATAGGATCACCCCCGCTCGTGCGGGTAAAATGTTCCATCAGCATAGCTTTTGTGCTTTCACTGAGGATCACCCCCGCTCGTGCGGGTAAAAT	CATCTAACGAGATTTTGAAAGAATATCCAACCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCGAGTCTTTGTTAGATAGCAGCCCTTACGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATCCCCAATTTATCGACCCATGTATCGTGGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CAAATCCCGAAAAACTTTAAAGCTTGTTCTGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTTCAGAAGATGGAACAAAAATATGCAAAATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGAAAGACCTGATGAATTGGCGCGTGCTGTTCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTGGGAGATAATCGCAGTTTCACGGTGTATCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CGGTTAAAGGCTTAGCCAGAAGCTTCTCAACTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGTCGGATACATCAACACGTATTCTATCGCCCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	CTTCGTTTAGTCTAGCTCTTACTAGTGATTGTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	AATGCCTCTGTCGAGTCAGGCGCTGTACTTCCA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TTGGTGATATTGCCCGTTACCCATCCAGTTATA
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTCTTTCCTCGGAACTTTTGCAGGAAACGTAA
GGATCACCCCCGCTCGTGCGGGTAAAAT	CCAGCAAACAAAGCGCCCCGAGCGGGTGACTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCCTAATGGAACTTATTTCCTGCTCGACTTACG
GGATCACCCCCGCTCGTGCGGGTAAAAT	GCTAACTACAATTTGTGCAGGCGCAGAGCCGTA
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCATGCTTACGTTTCAGCGCTTCAGTTTCAGCG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCAGCGGTGCAATCGATATATTGCGTGTTATTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TGGTCTGTAACTTGCAAATTAAGCTTAGATTTG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TCTCTTTATCCAAAATGACGGCACAGTGTACGG
GGATCACCCCCGCTCGTGCGGGTAAAAT	TAGCCATCAATGACCAATTCGGGCGCAAGAACA
GGATCACCCCCGCTCGTGCGGGTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
LR134320.1\|VEF19611.1\|1752776_1753718_-\|CRISPR-associated-protein	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LR134320.1\|VEF19595.1\|1742943_1746582_-\|exonuclease-RexA	unknown	unknown	gnl\|CDD\|274299
LR134320.1\|VEF19621.1\|1755089_1756310_-\|CRISPR-system-CASCADE-complex-protein-CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LR134320.1\|VEF19581.1\|1740687_1741203_-\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506
LR134320.1\|VEF19618.1\|1754367_1755084_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
LR134320.1\|VEF19586.1\|1741228_1741657_-\|galactose-6-phosphate-isomerase-subunit-LacA	unknown	unknown	gnl\|CDD\|181505
LR134320.1\|VEF19565.1\|1738261_1738735_-\|putative-PTS-family-fructose/mannitol-porter-component-IIA	unknown	unknown	gnl\|CDD\|334031
LR134320.1\|VEF19641.1\|1763195_1763459_-\|integral-membrane-protein	unknown	unknown	unknown
LR134320.1\|VEF19576.1\|1739736_1740669_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|273515
LR134320.1\|VEF19613.1\|1753720_1754362_-\|transcriptional-regulator	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
LR134320.1\|VEF19626.1\|1756299_1756899_-\|CRISPR-associated-Cse2-family-protein	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
LR134320.1\|VEF19632.1\|1758570_1761357_-\|helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
LR134320.1\|VEF19606.1\|1751872_1752775_-\|DNA-polymerase-III-subunit-alpha	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
LR134320.1\|VEF19556.1\|1736518_1737919_-\|putative-PTS-family-fructose/mannitol-porter-component-IIC	unknown	unknown	gnl\|CDD\|226298
LR134320.1\|VEF19570.1\|1738751_1739732_-\|tagatose-1,6-diphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
LR134320.1\|VEF19600.1\|1746571_1749814_-\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291
LR134320.1\|VEF19591.1\|1741963_1742719_-\|lactose-repressor	unknown	unknown	gnl\|CDD\|224268
LR134320.1\|VEF19636.1\|1761546_1762530_-\|Uncharacterised-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
LR134320.1\|VEF19629.1\|1756895_1758578_-\|CRISPR-system-CASCADE-complex-protein-CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
LR134320.1\|VEF19560.1\|1737944_1738247_-\|putative-PTS-family-fructose/mannitol-porter-component-IIB	unknown	unknown	gnl\|CDD\|225948

Protein	Function_ID	Function_description	E-value
LR134320.1\|VEF19611.1\|1752776_1753718_-\|CRISPR-associated-protein	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.08399e-131
LR134320.1\|VEF19595.1\|1742943_1746582_-\|exonuclease-RexA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134320.1\|VEF19621.1\|1755089_1756310_-\|CRISPR-system-CASCADE-complex-protein-CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.65533e-145
LR134320.1\|VEF19581.1\|1740687_1741203_-\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	8.58673e-124
LR134320.1\|VEF19618.1\|1754367_1755084_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.34468e-43
LR134320.1\|VEF19586.1\|1741228_1741657_-\|galactose-6-phosphate-isomerase-subunit-LacA	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	3.84241e-90
LR134320.1\|VEF19565.1\|1738261_1738735_-\|putative-PTS-family-fructose/mannitol-porter-component-IIA	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	1.58856e-23
LR134320.1\|VEF19576.1\|1739736_1740669_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|273515	TIGR01231, Tagatose-6-phosphate_kinase, tagatose-6-phosphate kinase. This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
LR134320.1\|VEF19613.1\|1753720_1754362_-\|transcriptional-regulator	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	6.09186e-69
LR134320.1\|VEF19626.1\|1756299_1756899_-\|CRISPR-associated-Cse2-family-protein	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	2.44356e-38
LR134320.1\|VEF19632.1\|1758570_1761357_-\|helicase	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	6.79642e-94
LR134320.1\|VEF19606.1\|1751872_1752775_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	1.61823e-41
LR134320.1\|VEF19556.1\|1736518_1737919_-\|putative-PTS-family-fructose/mannitol-porter-component-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	2.89783e-161
LR134320.1\|VEF19570.1\|1738751_1739732_-\|tagatose-1,6-diphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
LR134320.1\|VEF19600.1\|1746571_1749814_-\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134320.1\|VEF19591.1\|1741963_1742719_-\|lactose-repressor	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	3.66928e-78
LR134320.1\|VEF19636.1\|1761546_1762530_-\|Uncharacterised-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	9.10188e-10
LR134320.1\|VEF19629.1\|1756895_1758578_-\|CRISPR-system-CASCADE-complex-protein-CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	1.78806e-85
LR134320.1\|VEF19560.1\|1737944_1738247_-\|putative-PTS-family-fructose/mannitol-porter-component-IIB	gnl\|CDD\|225948	COG3414, SgaB, Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism].	1.94496e-17

>LR134320.1|VEF19600.1|1746571_1749814_-|ATP-dependent-nuclease-subunit-B
MKLLYTDIPYNITEILAEEAQIAAKAGKRVFYIAPNSLSFEKERAVLETLPERASFAITITRFEQMARYFVLNDIHQGETIDDNGLAMVFYRALSSFSDQDLRVFGRLKQDAHFINQLVDLYKELKASNLTVLELNQLNSAEKQEDLIKIFTEVETILSAGHFDNQSKIAFFAQQIKFGHLDTALQDLTIVVDGFTRFSAEEENLIGLLYEKGVDIIIGTYISQKAYRSTFSNENVYQASLDFIRGLAGKFQTKPEYVVSKQEALPAFTKLSQLFESCHDFSDSQLVLTDKDKEHVTIWDVINQKEEVEHVAKSIRRKLYEGHRYKDILVLLGDADAYKLQIGKIFDKYEIPYYFGKAESMSSHPLVHFVDSLERVKRYNFRAEDVMNLLKSGLYGKIRQNQLDKLEQYVIYADIKGKTKFFKDFTLDNHGQFDLKALNKLRAEVMSPLQELIKIQAQKGDSILQKLTNFLEAISLTNNFSKLIQGVSDTEQEKNEQVWKTFTVILEQFHTIFGQEKMKLADFLALLRSGMLAADYRTVPASVDVVTVKSYDLVEPHSNKFVFALGMTQSHFPKIVQNKSLISDEERAKINEATPDNRRFDIVTKENLKKNHFTALSLFNAATQELVLTLPQILNEAEDNTSSYLLELQDMGVPVVEKGGNRLAADPEDIGNYKALLSRVIELNRSAIDQELSKEEQTFWSVAVRYLRQKLAKEGLTIPEVNDKMQTKQVAAEVMAARFPIDQPLNLSSSALTTFYNNQYLYFLQYILGLQELETIHPDARNHGTYLHRVFELVMQDQSTDDFDSKLNRAIDITNHEDSFHLVYNEDEESRYALGILEDIARSTATVLKGDNPVQAESEEEAFELMLDQAVKIRGVIDRIDRLSDGSLGIVDYKSSKNTFDLQKFYNGLSPQLVTYIEALRSCKNLNDTDKIFGAMYLHMQEPKTDLANMKSIEKIPETVHKNLSYKGLFLEDEKAHLANGKYHLHDAVYSQKEVDLLLDYNKRLYRSAAKQIRKGNFLINPYSQDGKSVQGEQLKAITHFEADRHMPYARKLYQLPRKEKRQGFLALMQSKKEEEGNDL
>LR134320.1|VEF19595.1|1742943_1746582_-|exonuclease-RexA
MTFKPFLTDQEIASLQIQEAQSDKKQKRTPEQIEAIYTSGTNILVSASAGSGKTFVMIERIMDKILRGVTIDQLFISTFTVKAAGELKERLEKKITEQLRLTNDTALKQFLSEQLLGLQTADIGTMDAFTQKLVTQYGYTLGISPNFRILQDKSEQDLLKNDVFDDLFTDYRTGDQAELFTKLVRNFAGNRKDSSNFRQIIYKIYDFSQATDNPQRWLLENFLKGANTYKDFSAIPEQEVKDFLNTLQETALALRDVTDLEDYKQVTAKGTPTAAYQRHLKMIEQLQDWVLHFDSLYGRDGLGKLANDIATLIPSGNDVTVAGVKYPVFRSLHSRLRGLKHLETIFKYQDQSLPLLQVLQSFTLDFSKQYLQAKMQENAFEFSDIAHFAIQILEENDAIRQLYIDKYHEVMVDEYQDNNHTQERMLELLSNGRNRFMVGDIKQSIYRFRQADPQIFNQKFKDFQEHPEHGKLILLKENFRSQSEVLDATNSVFTHLMDETVGEILYDDTHQLVAGSSAQKIPYPQNETQVLIYDTKDQQNQDLAVEDDSNQISLGEVKLVAKEIIRLHNEEKVQFEDITLLVSSRTRNDGILQTFDDYGIPLVTDGGEQNYLKSVEVMVMLDTLRSIDNPLNDYALVALLRSPMFAFDEDDLARLALQNLPDQHKQNLYEKMENARNGQGQQVQLITEALSAKLDAFFETFLSWREFSLLNSLYDLIWKIYNDKFYYDYVGSLPKSEQRQANLYALALRADNFEKTGFKGLSRFIRMIDKILENQNDLADVEVALPKNAVTLMTIHKSKGLEFKYVFILNIDKKFSIQDMTSPLILSRQNGVGIKYIADMKEELEEKLLPTVKVSMDTLPYQLNKRELRLATLSEQMRLLYVAMTRSEKKLYLVGKGSQEKLGDQYDGKSENNHLPVADREHYLTFQDWLLAIEAAYAADELHFKTSFITDEDLTEDKMGSLEAEQAYDADNLKDNRQSDDIARALDMLEAVEKLNQHYKAAIHLPTVRTPSQIKKFYEPVMETEGVEVMQTSYQTKPKFELPQFSKKAKQDPTALGSSVHELMQRLHLSEQVSLEDILTALAELSVEENVKKAIQVDKILHFFQTSQLGKLIQANADKVYREAPFAMLQADPASGEDYVVRGIIDGYILFDNRIVLFDYKTDKFTNSQAIKERYRGQMTLYAQALSQSYNIQQVDSYLILLGGEKLEVVEI
>LR134320.1|VEF19591.1|1741963_1742719_-|lactose-repressor
MRKEERLEEITKLINKRGTIRVTEVVERLKVSDMTVRRDLTELEGLGVLTRIHGGARSNNIFQYKEMSHEEKHSRQIEEKHYIAQKAAELVEEGDTIFLGPGTTVELLAEEINKTTLQVITNCLPVFQILSQKQSETFRVHLLGGEMRSITQSFIGEITNIVLEKMHFSKMFFSGNGVKGNEVMTSSFQEAYTQKMALGRAIEKYLLIDSSKIGKEDFTSFYQLSQLTALITDCQDDDKLQKLSKYTEIIN
>LR134320.1|VEF19586.1|1741228_1741657_-|galactose-6-phosphate-isomerase-subunit-LacA
MAIIIGSDAAGKRLKDVIKTFLKDNNHEVLDVTERKDLDFVDSTLAVVHEVQKNDKNLGIAIDAYGAGSFMVATKVKGMIAAEVSDERSAYMTRGHNNARIITLGAEIVGDELAKNIVKDFVEAKYDGGRHQIRVDMLNKMC
>LR134320.1|VEF19581.1|1740687_1741203_-|galactose-6-phosphate-isomerase-subunit-LacB
MKIAIGCDHIVTDVKMELSKHLKEEGYEVLDVGTYDFTRTHYPIFGKKVGEAVSSGEADLGVCMCGTGVGISNAANKVPGVRTALVRDMTSALYSKEELNANVVSFGGAIIGKLLLFDIVDAFIKAQYKPTEENKKLIAKIKHLEAHNDKQADPHFFDEFLEKWNRGDYHD
>LR134320.1|VEF19576.1|1739736_1740669_-|tagatose-6-phosphate-kinase
MMLTVTMNPSIDIAYQLDDLKVDTVNRVIETHKTPGGKGLNVTRVLSQLGDDVLASGLLGGKLGEFLEAELDKSAIKHSFYKISAETRNCIAILHGGYQTEILEQGPYVSAKESKGFLEFFEKLLPKLEVVAISGSLPKGVPVDYYSQMIAICKQHQVPIVLDCSGQALLEVLNGAAKPTVIKPNTEELSQIMEREITNDVAVLKHALASPIFSGIDWIIVSLGSQGAFAKHGQTFYKVTIPKIAVVNPVGSGDSTVAGIISALAAGASDEKLLKKANTLGMLNAQEKLTGHVNLENYDNLYQQIEVAEV
>LR134320.1|VEF19570.1|1738751_1739732_-|tagatose-1,6-diphosphate-aldolase
MTLTQEKRSYMEKLSDENGIISALAFDQRGALKRLMAQYQTQEPTIAQMEELKVLVAEELTPYASSMLLDPEYGLPATKHLDKNAGLLLAYEKTGYDTTSTKRLPDCLVEWSAKRLKKQGADAVKFLLYYDVDGDEEVNQQKQAYIERIGSECKAEDIPFFLEILAYDETITDAASVEYAKVKPHKVLDAMKVFSDERFGIDVLKVEVPVNMKYVEGFGDGPIVHTQDQAANFFKQQDQATPLPYIYLSAGVSAKLFQDTLVFAKESGANFNGVLCGRATWAGSVKDYIEKGEAAARQWLRTEGFKNIDELNKVLKATATSWEERA
>LR134320.1|VEF19565.1|1738261_1738735_-|putative-PTS-family-fructose/mannitol-porter-component-IIA
MSQLFSEDTVFISKQKEKEEVFKEIAGKLLERKLVTSEYINNLIEREKNYPTALSLSPIDTSLPNIAIPHTESEYVTETRIVPVKLKYPIVFHNMILPDEEVTVSFLFMILNYNESEQAGLLAGIMDFINRQSISDLKVFFNLEDSHKIFDYLKQHY
>LR134320.1|VEF19560.1|1737944_1738247_-|putative-PTS-family-fructose/mannitol-porter-component-IIB
MIKILAACGAGVNSSHQIKSALESELTKRGYQVSCDAVMIKDINEDLLSHYDIFAQISKTDLGFDVTIPVVDAGPILYRIPVMAEPVYQKMEEIIKSLHT
>LR134320.1|VEF19556.1|1736518_1737919_-|putative-PTS-family-fructose/mannitol-porter-component-IIC
MNVIIEFANAVFKPIIDLGAAPLMTVILTIIALCFRVKFTKALEGGIKLGIALTGISAIINILSTAFSGAMTDFVDRTGLHLNITDVGWAPLATITWGSPYTLYFLLVMLIVNIIMLVFHQTNTLDVDIFDIWHLSIVGLFAIFSGANLLVATVLVIFIGVLKIINSDVMKPTFNDLLGTGNDNPMTTTHMNYMMNPIIMVFDKIFDKLFPWLDKYDFDAAKLNAKIGFWGSKFAIGVYLGIFVGLLAGQTPTQVISLAFTAAVCLELFSLIGSWFIAAVEPLSQGITNFASSKLKGRTLNIGLDWPFLAGRAEIWAAANILAPIMLFEAIILPGNKLLPLAGIIAMGVTPALLVVTRGKLIRMIIIGTIELPLFLWSGSLMAPFITETAKKVGAFPKGISSSTLISHTTMEGPIEKFLAYFAGKGTAGDVQYMLYAVIALAIYTLLFFWYVAQMKKRNQAYEEAK
>LR134320.1|VEF19606.1|1751872_1752775_-|DNA-polymerase-III-subunit-alpha
MPLTVITVKNAPTSLRGDLTKWMQEIATGVYVGNFNTKVREQLWSRVKDSVSNGEATLSFAYRNEIGYCFDTMNAQRKVVDFEGIPLVQLPNSNNNIKEEMNLGFSHAAKFRKIRRYSSHSKNNSPSLVPYVVIDIETDGLDENENSIIEIGAVKIGPSQLEEFNYLVKYDKILPKQISKLTGISQELLDRDGKDLQVVLQEFLNFIGNHDLVGYGINFDIKFINKKLKELNQPLLKNRVYDLMQYAKKEKLFLDNYKLQTVLKAYEIEDEVPHRALHDSKLIYDLSTKMNKFLKGINQK
>LR134320.1|VEF19611.1|1752776_1753718_-|CRISPR-associated-protein
MKEKSGAKKTSLKELPKISDRVSFIYVEHAKINRVDSAITVSDSNGTVRIPAAMLGVLLLGPGTDISHRAVELIGDTGTSIVWIGERGVRQYAHGRALAHSTKFLEKQARLVSNSRSRLKVARKMYQMRFPNEDVSSLTMQQLRGREGARIRKVYKLQSKKYKVPWTKREYSPDNFEDGTAVNQSLSAANVALYGLVHSIVVALGASPGLGFVHTGHDLSFVYDVADLYKAEFTIPIAFEVAANHEIGDDIGRITRLKIRDSFVDGKLMARIVKDIQYLLDIEAEDELLIDILALWDDREKLVKHGVSYKENS
>LR134320.1|VEF19613.1|1753720_1754362_-|transcriptional-regulator
MYISRVEIDMNNRRKVKNLTHVGAFHDWVERSFPNEIEKQIRTRKLWRIDTLQGKNYLIIISSEKPDLLLLEKYGVEGSAQTKLYDNFLNTLKKGNRMKFRVALNPVISLPSSDNKKRGIVKPHVTSEYQMKYLKDRSEKNGFLLDEAEFLIVERGYEVFKKAKPKPIRLIKTVYEGTLTISDVDRFRKVLTEGIGKKKAYGFGLMTVIPAGD
>LR134320.1|VEF19618.1|1754367_1755084_-|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI
MKTILLKFAGPLQSWGTSSHFETRHTDFYPSKSAVIGMIAASLGYRRNEDEKIRKLNELDFAVRVDQQGNLLRDWHNAKSDKRKDPYTTNRYYLEDAVFVVAISHQNYAFIQMIEDGLRSPYFQPFMGRRACPLPVDFIVQVTNDSALDSLKQLDWQAATWYMKRQSTDDRISLEIYTDSYLTGKESYQLRQDKVLSFSQKERKFGFRYESRVRVEVLNPLWQEQSSTEHDIFNSIGD
>LR134320.1|VEF19621.1|1755089_1756310_-|CRISPR-system-CASCADE-complex-protein-CasC
MTTNQEKLFLDIHVIQTLPPSNINRDDTGGPKTAQYGGVRRARVSSQSWKRAMREYLVNSLKLENTSARTVKIVEYIAKQIQLIDQSIEIDIAKKLVKEMLERVVKKKSGKDEKIFVIDNEYKLSALFFISKFQSIKLAELALNPEFVEICNKFDALSGKVKEDKEYKKSKEYKEIDAAYKIQMKKIKEILNELLSIDIAFFGRMLASDPSLNEDASSQVAHAISTHAIQTEFDFFTAIDDLAPEDNAGAGMLGTVEFNSSTLYRYANIAIHELESQLDDGESAVNALKLFVEAFAKSLPTGKVNTFANQTLPQALVVTVRNDRPVNLVSAFEEPVKSSNGYVTKSIEKLSKEFVKVEKMVKKPVLSFYVSLEEVEALTKVGIEKNSITELVEDFSQELSELIQNR
>LR134320.1|VEF19626.1|1756299_1756899_-|CRISPR-associated-Cse2-family-protein
MMSEESYVRMYFVTKQILIKLNKQQNTSAGKAMLARLRHSVGKPISEAKEVWPILFENVPENFLSQYDNASYEEIAILTAIQLYALYQQGMSHNVFDDSAKKFQNIGYSLKSIRTRVDTVAVDRRFNTMITATTFEELVHHLRQLITLLKSKTPETKIDFARLATDLYCFLRDYQETVRLKWARQYYKHSSEEEAENDN
>LR134320.1|VEF19629.1|1756895_1758578_-|CRISPR-system-CASCADE-complex-protein-CasA
MSRFNLLDEPWISVVFDEKGSTKEVSLLDFFQNAHHYKDLAGDTKTQDFAVLRVLLAVLHTVFSRFDANGNVYGYLEIDEKYRQIEEIEEDDLEEYEDDLYETWLTLWQNRQFPDIIEEYLKKWRDRFYLFDEEYPFFQVRREDISEDKINQKSATSIFGRNVNKTISESNNKITLFSPRDNRNKDILSASEVARWLLTFQGYTGVFDKTTFKGGKGSPSKGWIYDLGGVFVKGSNLFTTLLLNFILPYQERDNLINIQSPSWEFDSNELISMYLAGKEINNIAGLYTVWSRGIYIDSNPDLSLPFSFEIVKLPDINHQDNFLEPMTLWIYNQLGNNKGHYTPKKHVSNQSLWRSFGLLVNGQNNQRRPGIIDWLEVECIRDVIGIIPITICSVSMKDDGNTSSRMPTDEIIDTFSINEFVLTDFQENGWTTRINNIVEETKTVISVIYKDYVDDIRKIRNIKSGTFITQKLEELYFKIDQPFRQWLSGIHYGDEKDEKVFKWRGVLKKLVHQEAKILLQDGGPRDYIGIVDKDNETVKNIVTAYESFNYRLNKNLKEKK
>LR134320.1|VEF19632.1|1758570_1761357_-|helicase
MDKKVLRYNFWAKKREEKGQFLWLPLMQHLEDTKNVAGLLWEHWLGEGQKALIIASLKTGKKDEKTAKQLAQFLAAVHDIGKATPVFQSKKGYANSKDLDLELLEKLERAGFEGISSITLANPEKSPHALAGQYILHYNKVKEDIATIVGGHHGKPVDDRATYKNQRSQESNYYQSGKSGNTIYQKWERAQEEILNWALEVSGFKSVDELPTIKQSAQVILSGLLIMADWIASNEDYFPLISIDEREVENKADRLSGFEKWKRSSLWVSRNTWDFEGLYQARFDFEPRDVQAVLSKTIADTEQPGIFILEAPMGIGKTEAALVATEQLAEKTDRNGIFFGLPTQATSNGIFPRIEKWLESIKEDLDDNISIQLVHGKAALNADFSELPKGISINIDDFENGSVIVNEWFSGRKTAVLDDFVVGTVDQFLMLALKQKHLALRHLGFSKKVVVIDEVHAYDAYMNQYLLEALRWMGAYGVPVIILSATLPAERREKLLKSYMFGMGKRFEEKEKEQLSKQLKTEAYPLITYNNGFDICQITEFKKGENKKILLSQLEEEDLLDTVKGLLSDGGVAGIIVNTVKRAQKIAKVFADSLGEDMVEIFHSGFIATERVRKEQELLKMIGKDANRPYRKIIIGTQVIEQSLDIDFDVMISDLAPMDLLIQRMGRLHRHKIDRPQKHVFPKFYVIGMNDDLKFEEGSSFVYGDYLLARTQYYLPDSINLPEDISILVQKVYDEKLELDYPTELLDKKYHNAKSEHETKIGNKESKARDYRIADPVLRETRSRKENLIGWLENSHPDDSDERAYAQVRDIEDIVEVIALKKVGDGYALFGEGEDLSELITDFNIAKKVAQNTLRLPIALTKSYNVDDTIKELEMYSRMNLNNWQDSSWLKGALGIIFDENNEFLIGGYKLVYDEKYGVRMEEIENHE
>LR134320.1|VEF19636.1|1761546_1762530_-|Uncharacterised-protein
MDEFNQVERFLYLYTELYKGNTISKQVYLDKFGVSDASFNKDIRKLKDAARHLNLDFDIKINKKESYYYLDYTSETGGNLSDIEAYTLSKILLESRALSKKKTKNIIKKLINRTVNEDYRTILDKQTENELSFYKQLNYFNDENHDQNYLSNLGKLSQAVEDTLKTEIPIKIEYSSKGETKSALILPFAILFHEYYFYITSYKFENEEWVSRTYRLDRIESISNADGKEIVKAQAFFHKYPSPSLIRDQVIMMFSGEPYLIRLKIVDKTITEYLKDALPTLQVIDEEEAIYEIRTLGVEGIQLFLRRYGSQVEFVSMTELNTGDNEG
>LR134320.1|VEF19641.1|1763195_1763459_-|integral-membrane-protein
MRKEKNMLILGWVATFMSIMMYVSYIPQIMNNLAGNKGDFIQPSVAALNCTLWVIYGLCKEKRDLPLAAANMPGIVFGLIAAITALV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LR134320_2	2.8\|1750384\|33\|LR134320\|CRISPRCasFinder,CRT	1750384-1750416	33	LR134320.1	136011-136043	0	1.0

1. spacer 2.8|1750384|33|LR134320|CRISPRCasFinder,CRT matches to position: 136011-136043, mismatch: 0, identity: 1.0

gtggataaccgatgaaacttaaaaaaatattag	CRISPR spacer
gtggataaccgatgaaacttaaaaaaatattag	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134320_2	2.23\|1751301\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751301-1751333	33	MT430910	Streptococcus phage smHBZ8, complete genome	23158-23190	0	1.0
LR134320_1	1.2\|1647157\|31\|LR134320\|CRT,CRISPRCasFinder	1647157-1647187	31	AM749121	Streptococcus phage M102 complete genome	18718-18748	1	0.968
LR134320_1	1.2\|1647157\|31\|LR134320\|CRT,CRISPRCasFinder	1647157-1647187	31	NC_012884	Streptococcus phage M102, complete genome	18718-18748	1	0.968
LR134320_1	1.2\|1647157\|31\|LR134320\|CRT,CRISPRCasFinder	1647157-1647187	31	DQ386162	Streptococcus phage M102AD, complete genome	18840-18870	1	0.968
LR134320_1	1.19\|1648280\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648280-1648309	30	NC_029030	Streptococcus phage APCM01, complete genome	5760-5789	1	0.967
LR134320_1	1.19\|1648280\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648280-1648309	30	AM749121	Streptococcus phage M102 complete genome	5623-5652	1	0.967
LR134320_1	1.19\|1648280\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648280-1648309	30	NC_012884	Streptococcus phage M102, complete genome	5623-5652	1	0.967
LR134320_1	1.19\|1648280\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648280-1648309	30	DQ386162	Streptococcus phage M102AD, complete genome	5744-5773	1	0.967
LR134320_1	1.20\|1648346\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648346-1648375	30	NC_029030	Streptococcus phage APCM01, complete genome	18211-18240	1	0.967
LR134320_1	1.22\|1648478\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648478-1648507	30	AM749121	Streptococcus phage M102 complete genome	13311-13340	1	0.967
LR134320_1	1.22\|1648478\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648478-1648507	30	NC_012884	Streptococcus phage M102, complete genome	13311-13340	1	0.967
LR134320_2	2.1\|1750141\|32\|LR134320\|PILER-CR	1750141-1750172	32	DQ386162	Streptococcus phage M102AD, complete genome	817-848	1	0.969
LR134320_2	2.4\|1750140\|33\|LR134320\|CRISPRCasFinder,CRT	1750140-1750172	33	DQ386162	Streptococcus phage M102AD, complete genome	817-849	1	0.97
LR134320_2	2.26\|1751484\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751484-1751516	33	DQ386162	Streptococcus phage M102AD, complete genome	24371-24403	1	0.97
LR134320_2	2.29\|1751667\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751667-1751699	33	MT430910	Streptococcus phage smHBZ8, complete genome	12192-12224	1	0.97
LR134320_2	2.29\|1751667\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751667-1751699	33	NC_029030	Streptococcus phage APCM01, complete genome	19912-19944	1	0.97
LR134320_1	1.2\|1647157\|31\|LR134320\|CRT,CRISPRCasFinder	1647157-1647187	31	NC_029030	Streptococcus phage APCM01, complete genome	18810-18840	2	0.935
LR134320_1	1.9\|1647620\|30\|LR134320\|CRT,CRISPRCasFinder	1647620-1647649	30	AM749121	Streptococcus phage M102 complete genome	7376-7405	2	0.933
LR134320_1	1.9\|1647620\|30\|LR134320\|CRT,CRISPRCasFinder	1647620-1647649	30	NC_012884	Streptococcus phage M102, complete genome	7376-7405	2	0.933
LR134320_1	1.9\|1647620\|30\|LR134320\|CRT,CRISPRCasFinder	1647620-1647649	30	DQ386162	Streptococcus phage M102AD, complete genome	7497-7526	2	0.933
LR134320_1	1.13\|1647884\|30\|LR134320\|CRT,CRISPRCasFinder	1647884-1647913	30	MT430910	Streptococcus phage smHBZ8, complete genome	16482-16511	2	0.933
LR134320_1	1.19\|1648280\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648280-1648309	30	MT430910	Streptococcus phage smHBZ8, complete genome	26441-26470	2	0.933
LR134320_1	1.20\|1648346\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648346-1648375	30	MT430910	Streptococcus phage smHBZ8, complete genome	13944-13973	2	0.933
LR134320_1	1.21\|1648412\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648412-1648441	30	NC_029030	Streptococcus phage APCM01, complete genome	7881-7910	2	0.933
LR134320_1	1.22\|1648478\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648478-1648507	30	MT430910	Streptococcus phage smHBZ8, complete genome	18752-18781	2	0.933
LR134320_1	1.23\|1647157\|32\|LR134320\|PILER-CR	1647157-1647188	32	AM749121	Streptococcus phage M102 complete genome	18718-18749	2	0.938
LR134320_1	1.23\|1647157\|32\|LR134320\|PILER-CR	1647157-1647188	32	NC_012884	Streptococcus phage M102, complete genome	18718-18749	2	0.938
LR134320_1	1.23\|1647157\|32\|LR134320\|PILER-CR	1647157-1647188	32	DQ386162	Streptococcus phage M102AD, complete genome	18840-18871	2	0.938
LR134320_2	2.1\|1750141\|32\|LR134320\|PILER-CR	1750141-1750172	32	MT430910	Streptococcus phage smHBZ8, complete genome	31382-31413	2	0.938
LR134320_2	2.4\|1750140\|33\|LR134320\|CRISPRCasFinder,CRT	1750140-1750172	33	MT430910	Streptococcus phage smHBZ8, complete genome	31381-31413	2	0.939
LR134320_2	2.11\|1750568\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1750568-1750600	33	DQ386162	Streptococcus phage M102AD, complete genome	17425-17457	2	0.939
LR134320_2	2.26\|1751484\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751484-1751516	33	MT430910	Streptococcus phage smHBZ8, complete genome	7218-7250	2	0.939
LR134320_1	1.9\|1647620\|30\|LR134320\|CRT,CRISPRCasFinder	1647620-1647649	30	MT430910	Streptococcus phage smHBZ8, complete genome	24688-24717	3	0.9
LR134320_1	1.15\|1648016\|30\|LR134320\|CRT,CRISPRCasFinder	1648016-1648045	30	NC_029030	Streptococcus phage APCM01, complete genome	23421-23450	3	0.9
LR134320_1	1.15\|1648016\|30\|LR134320\|CRT,CRISPRCasFinder	1648016-1648045	30	AM749121	Streptococcus phage M102 complete genome	23371-23400	3	0.9
LR134320_1	1.15\|1648016\|30\|LR134320\|CRT,CRISPRCasFinder	1648016-1648045	30	NC_012884	Streptococcus phage M102, complete genome	23371-23400	3	0.9
LR134320_1	1.22\|1648478\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648478-1648507	30	NC_029030	Streptococcus phage APCM01, complete genome	13402-13431	3	0.9
LR134320_1	1.23\|1647157\|32\|LR134320\|PILER-CR	1647157-1647188	32	NC_029030	Streptococcus phage APCM01, complete genome	18810-18841	3	0.906
LR134320_1	1.17\|1648148\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648148-1648177	30	MT430910	Streptococcus phage smHBZ8, complete genome	6157-6186	4	0.867
LR134320_1	1.17\|1648148\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648148-1648177	30	NC_029030	Streptococcus phage APCM01, complete genome	25685-25714	4	0.867
LR134320_2	2.10\|1750507\|33\|LR134320\|CRISPRCasFinder,CRT	1750507-1750539	33	MT430910	Streptococcus phage smHBZ8, complete genome	7777-7809	4	0.879
LR134320_2	2.10\|1750507\|33\|LR134320\|CRISPRCasFinder,CRT	1750507-1750539	33	DQ386162	Streptococcus phage M102AD, complete genome	23813-23845	4	0.879
LR134320_1	1.13\|1647884\|30\|LR134320\|CRT,CRISPRCasFinder	1647884-1647913	30	AM749121	Streptococcus phage M102 complete genome	15581-15610	5	0.833
LR134320_1	1.13\|1647884\|30\|LR134320\|CRT,CRISPRCasFinder	1647884-1647913	30	NC_012884	Streptococcus phage M102, complete genome	15581-15610	5	0.833
LR134320_1	1.13\|1647884\|30\|LR134320\|CRT,CRISPRCasFinder	1647884-1647913	30	DQ386162	Streptococcus phage M102AD, complete genome	15703-15732	5	0.833
LR134320_1	1.15\|1648016\|30\|LR134320\|CRT,CRISPRCasFinder	1648016-1648045	30	DQ386162	Streptococcus phage M102AD, complete genome	23207-23236	5	0.833
LR134320_1	1.3\|1647224\|30\|LR134320\|CRT,CRISPRCasFinder	1647224-1647253	30	NC_031230	Gordonia phage Yvonnetastic, complete genome	24221-24250	6	0.8
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	MN718463	Clostridium phage phiCDKH01, complete genome	595-624	6	0.8
LR134320_1	1.15\|1648016\|30\|LR134320\|CRT,CRISPRCasFinder	1648016-1648045	30	NC_014642	Achromobacter xylosoxidans A8 plasmid pA82, complete sequence	113378-113407	6	0.8
LR134320_1	1.22\|1648478\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648478-1648507	30	MK448727	Streptococcus phage Javan291, complete genome	22496-22525	6	0.8
LR134320_2	2.2\|1750202\|32\|LR134320\|PILER-CR	1750202-1750233	32	MN693497	Marine virus AFVG_25M179, complete genome	49970-50001	6	0.812
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	110013-110042	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	81857-81886	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	64848-64877	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	94912-94941	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	11958-11987	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	40114-40143	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	LN681537	Clostridium phage phiCD211, complete genome	20820-20849	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	LN681537	Clostridium phage phiCD211, complete genome	48976-49005	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP014218	Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence	21679-21708	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP014147	Clostridium botulinum strain CDC_67190 plasmid pNPD12_2, complete sequence	27154-27183	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	CP033573	Acinetobacter nosocomialis strain 2010N17-248 plasmid p2010N17-248, complete sequence	10230-10259	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP014173	Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence	30164-30193	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	MF547662	Clostridioides phage LIBA6276, complete genome	48775-48804	7	0.767
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	MF547663	Clostridioides phage LIBA2945, complete genome	48775-48804	7	0.767
LR134320_1	1.13\|1647884\|30\|LR134320\|CRT,CRISPRCasFinder	1647884-1647913	30	NZ_LT963411	Pseudomonas syringae isolate CFBP3840 plasmid PP2, complete sequence	83516-83545	7	0.767
LR134320_1	1.13\|1647884\|30\|LR134320\|CRT,CRISPRCasFinder	1647884-1647913	30	MN693026	Marine virus AFVG_117M72, complete genome	81180-81209	7	0.767
LR134320_1	1.24\|1647224\|31\|LR134320\|PILER-CR	1647224-1647254	31	NC_031230	Gordonia phage Yvonnetastic, complete genome	24221-24251	7	0.774
LR134320_2	2.23\|1751301\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751301-1751333	33	NC_007486	Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence	62043-62075	7	0.788
LR134320_2	2.25\|1751423\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751423-1751455	33	NC_008308	Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence	77153-77185	7	0.788
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	NC_020124	Bacillus thuringiensis YBT-1518 plasmid pBMB0228, complete sequence	16890-16919	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MG770897	Staphylococcus phage SH-St 15644, complete genome	39840-39869	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	NC_011344	Staphylococcus phage phi2958PVL, complete genome	15657-15686	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MG029513	Staphylococcus phage phiSa2wa_st72, complete genome	16037-16066	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MH384261	Staphylococcus phage SA137ruMSSAST121PVL, complete genome	14828-14857	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	KY056620	Staphylococcus phage P240, complete genome	40867-40896	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MK801681	Staphylococcus phage SAP11, complete genome	25831-25860	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	NC_004616	Staphylococcus prophage phi 12, complete genome	15422-15451	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MG029511	Staphylococcus phage phiSa2wa_st30, complete genome	14625-14654	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	AF424782	Staphylococcus aureus phage phi 12, complete genome	15422-15451	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MK940809	Staphylococcus phage Sa2wa_st8, complete genome	14740-14769	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MF580410	Staphylococcus phage phiSa2wa_st1, complete genome	14410-14439	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	JQ779023	Staphylococcus phage SMSAP5, complete genome	5079-5108	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	KT186243	Staphylococcus phage vB_SauS_phi2, complete genome	39114-39143	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	AY954956	Bacteriophage 3A, complete genome	38046-38075	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	AP009363	Staphylococcus phage phi2958PVL proviral DNA, complete seqeunce	15657-15686	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	KF598856	Staphylococcus phage YMC/09/04/R1988, complete genome	39340-39369	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	NC_007053	Staphylococcus phage 3A, complete genome	38046-38075	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	AY954957	Bacteriophage 47, complete genome	39669-39698	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MG029517	Staphylococcus phage phiSa2wa_st93, complete genome	14740-14769	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MG029516	Staphylococcus phage phiSa2wa_st93mssa, complete genome	14740-14769	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MK801680	Staphylococcus phage SAP8, complete genome	40427-40456	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	NC_007054	Staphylococcus phage 47, complete genome	39669-39698	8	0.733
LR134320_1	1.7\|1647488\|30\|LR134320\|CRT,CRISPRCasFinder	1647488-1647517	30	MK448458	Streptococcus satellite phage Javan373, complete genome	4169-4198	8	0.733
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	HG796274	Uncultured bacterium plasmid pRGI00185	2412-2441	8	0.733
LR134320_1	1.11\|1647752\|30\|LR134320\|CRT,CRISPRCasFinder	1647752-1647781	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	578961-578990	8	0.733
LR134320_1	1.15\|1648016\|30\|LR134320\|CRT,CRISPRCasFinder	1648016-1648045	30	MK448987	Streptococcus phage Javan576, complete genome	43273-43302	8	0.733
LR134320_1	1.16\|1648082\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648082-1648111	30	MN694430	Marine virus AFVG_250M44, complete genome	3621-3650	8	0.733
LR134320_1	1.16\|1648082\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648082-1648111	30	MN692992	Marine virus AFVG_117M93, complete genome	3619-3648	8	0.733
LR134320_1	1.21\|1648412\|30\|LR134320\|CRT,CRISPRCasFinder,PILER-CR	1648412-1648441	30	MH618488	Enterococcus phage vB_EfaS_HEf13, complete genome	54966-54995	8	0.733
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MG770897	Staphylococcus phage SH-St 15644, complete genome	39839-39869	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	NC_011344	Staphylococcus phage phi2958PVL, complete genome	15656-15686	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MG029513	Staphylococcus phage phiSa2wa_st72, complete genome	16036-16066	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MH384261	Staphylococcus phage SA137ruMSSAST121PVL, complete genome	14827-14857	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	KY056620	Staphylococcus phage P240, complete genome	40866-40896	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	NC_004616	Staphylococcus prophage phi 12, complete genome	15421-15451	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MG029511	Staphylococcus phage phiSa2wa_st30, complete genome	14624-14654	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	AF424782	Staphylococcus aureus phage phi 12, complete genome	15421-15451	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MK940809	Staphylococcus phage Sa2wa_st8, complete genome	14739-14769	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MF580410	Staphylococcus phage phiSa2wa_st1, complete genome	14409-14439	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	KT186243	Staphylococcus phage vB_SauS_phi2, complete genome	39113-39143	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	AY954956	Bacteriophage 3A, complete genome	38045-38075	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	AP009363	Staphylococcus phage phi2958PVL proviral DNA, complete seqeunce	15656-15686	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	KF598856	Staphylococcus phage YMC/09/04/R1988, complete genome	39339-39369	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	NC_007053	Staphylococcus phage 3A, complete genome	38045-38075	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	AY954957	Bacteriophage 47, complete genome	39668-39698	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MG029517	Staphylococcus phage phiSa2wa_st93, complete genome	14739-14769	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MG029516	Staphylococcus phage phiSa2wa_st93mssa, complete genome	14739-14769	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MK801680	Staphylococcus phage SAP8, complete genome	40426-40456	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	NC_007054	Staphylococcus phage 47, complete genome	39668-39698	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	MK801681	Staphylococcus phage SAP11, complete genome	25831-25861	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	JQ779023	Staphylococcus phage SMSAP5, complete genome	5079-5109	8	0.742
LR134320_1	1.28\|1647488\|31\|LR134320\|PILER-CR	1647488-1647518	31	NC_020124	Bacillus thuringiensis YBT-1518 plasmid pBMB0228, complete sequence	16889-16919	9	0.71
LR134320_2	2.2\|1750202\|32\|LR134320\|PILER-CR	1750202-1750233	32	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	487091-487122	9	0.719
LR134320_2	2.2\|1750202\|32\|LR134320\|PILER-CR	1750202-1750233	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	342869-342900	9	0.719
LR134320_2	2.5\|1750201\|33\|LR134320\|CRISPRCasFinder,CRT	1750201-1750233	33	MN693497	Marine virus AFVG_25M179, complete genome	49970-50002	9	0.727
LR134320_2	2.5\|1750201\|33\|LR134320\|CRISPRCasFinder,CRT	1750201-1750233	33	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	487090-487122	9	0.727
LR134320_2	2.9\|1750445\|34\|LR134320\|CRISPRCasFinder,CRT	1750445-1750478	34	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	371875-371908	9	0.735
LR134320_2	2.14\|1750752\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1750752-1750784	33	AP013379	Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C43	1300-1332	9	0.727
LR134320_2	2.24\|1751362\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751362-1751394	33	NZ_CP021045	Phaeobacter gallaeciensis strain P129 plasmid pP129_e, complete sequence	53490-53522	9	0.727
LR134320_2	2.24\|1751362\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751362-1751394	33	NZ_CP010678	Phaeobacter gallaeciensis strain P75 plasmid pP75_e, complete sequence	53583-53615	9	0.727
LR134320_2	2.24\|1751362\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751362-1751394	33	NC_023142	Phaeobacter gallaeciensis DSM 26640 plasmid pGal_F69, complete sequence	53612-53644	9	0.727
LR134320_2	2.24\|1751362\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751362-1751394	33	NZ_CP010789	Phaeobacter gallaeciensis strain P63 plasmid pP63_e, complete sequence	53577-53609	9	0.727
LR134320_2	2.24\|1751362\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751362-1751394	33	NZ_CP010642	Phaeobacter gallaeciensis strain P73 plasmid pP73_f, complete sequence	53583-53615	9	0.727
LR134320_2	2.24\|1751362\|33\|LR134320\|CRISPRCasFinder,CRT,PILER-CR	1751362-1751394	33	NZ_CP010593	Phaeobacter gallaeciensis strain P11 plasmid pP11_e, complete sequence	53609-53641	9	0.727
LR134320_2	2.5\|1750201\|33\|LR134320\|CRISPRCasFinder,CRT	1750201-1750233	33	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	342869-342901	10	0.697

1. spacer 2.23|1751301|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 0, identity: 1.0

gctctttcctcggaacttttgcaggaaacgtaa	CRISPR spacer
gctctttcctcggaacttttgcaggaaacgtaa	Protospacer
*********************************

2. spacer 1.2|1647157|31|LR134320|CRT,CRISPRCasFinder matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 1, identity: 0.968

aaacgtggctggtacttcaggacgcaaataa	CRISPR spacer
aagcgtggctggtacttcaggacgcaaataa	Protospacer
**.****************************

3. spacer 1.2|1647157|31|LR134320|CRT,CRISPRCasFinder matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 1, identity: 0.968

aaacgtggctggtacttcaggacgcaaataa	CRISPR spacer
aagcgtggctggtacttcaggacgcaaataa	Protospacer
**.****************************

4. spacer 1.2|1647157|31|LR134320|CRT,CRISPRCasFinder matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 1, identity: 0.968

aaacgtggctggtacttcaggacgcaaataa	CRISPR spacer
aagcgtggctggtacttcaggacgcaaataa	Protospacer
**.****************************

5. spacer 1.19|1648280|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 1, identity: 0.967

ctttggcgactttacaagtcttgtccgcaa	CRISPR spacer
ctttggcgacttcacaagtcttgtccgcaa	Protospacer
************.*****************

6. spacer 1.19|1648280|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 1, identity: 0.967

ctttggcgactttacaagtcttgtccgcaa	CRISPR spacer
ctttggcgacttcacaagtcttgtccgcaa	Protospacer
************.*****************

7. spacer 1.19|1648280|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 1, identity: 0.967

ctttggcgactttacaagtcttgtccgcaa	CRISPR spacer
ctttggcgacttcacaagtcttgtccgcaa	Protospacer
************.*****************

8. spacer 1.19|1648280|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 1, identity: 0.967

ctttggcgactttacaagtcttgtccgcaa	CRISPR spacer
ctttggcgacttcacaagtcttgtccgcaa	Protospacer
************.*****************

9. spacer 1.20|1648346|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 1, identity: 0.967

gatatgctgtttctggttctaacgcttatc	CRISPR spacer
gatatgctgtttctggctctaacgcttatc	Protospacer
****************.*************

10. spacer 1.22|1648478|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 1, identity: 0.967

attaagggtatgatttgatgaaattcattg	CRISPR spacer
attaagggtatgatttgatgaaatacattg	Protospacer
************************ *****

11. spacer 1.22|1648478|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 1, identity: 0.967

attaagggtatgatttgatgaaattcattg	CRISPR spacer
attaagggtatgatttgatgaaatacattg	Protospacer
************************ *****

12. spacer 2.1|1750141|32|LR134320|PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 1, identity: 0.969

attgagagacgctatagaatttctagaaactc	CRISPR spacer
attaagagacgctatagaatttctagaaactc	Protospacer
***.****************************

13. spacer 2.4|1750140|33|LR134320|CRISPRCasFinder,CRT matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 1, identity: 0.97

attgagagacgctatagaatttctagaaactca	CRISPR spacer
attaagagacgctatagaatttctagaaactca	Protospacer
***.*****************************

14. spacer 2.26|1751484|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 1, identity: 0.97

gctaactacaatttgtgcaggcgcagagccgta	CRISPR spacer
gctgactacaatttgtgcaggcgcagagccgta	Protospacer
***.*****************************

15. spacer 2.29|1751667|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 1, identity: 0.97

tggtctgtaacttgcaaattaagcttagatttg	CRISPR spacer
tggtctgtaacttgcaaattaagtttagatttg	Protospacer
***********************.*********

16. spacer 2.29|1751667|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 1, identity: 0.97

tggtctgtaacttgcaaattaagcttagatttg	CRISPR spacer
tggtctgtaacttgcaagttaagcttagatttg	Protospacer
*****************.***************

17. spacer 1.2|1647157|31|LR134320|CRT,CRISPRCasFinder matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 2, identity: 0.935

aaacgtggctggtacttcaggacgcaaataa	CRISPR spacer
aagagtggctggtacttcaggacgcaaataa	Protospacer
**. ***************************

18. spacer 1.9|1647620|30|LR134320|CRT,CRISPRCasFinder matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 2, identity: 0.933

gaaattacctctgaaatgtggggcactaaa	CRISPR spacer
gaaattacctctgaaatgtggggaactaag	Protospacer
*********************** *****.

19. spacer 1.9|1647620|30|LR134320|CRT,CRISPRCasFinder matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 2, identity: 0.933

gaaattacctctgaaatgtggggcactaaa	CRISPR spacer
gaaattacctctgaaatgtggggaactaag	Protospacer
*********************** *****.

20. spacer 1.9|1647620|30|LR134320|CRT,CRISPRCasFinder matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 2, identity: 0.933

gaaattacctctgaaatgtggggcactaaa	CRISPR spacer
gaaattacctctgaaatgtggggaactaag	Protospacer
*********************** *****.

21. spacer 1.13|1647884|30|LR134320|CRT,CRISPRCasFinder matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.933

acctgactaatcaagagcaagaatggaaaa	CRISPR spacer
acctgaccaatcaggagcaagaatggaaaa	Protospacer
*******.*****.****************

22. spacer 1.19|1648280|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.933

ctttggcgactttacaagtcttgtccgcaa	CRISPR spacer
ctttggtgactttacaagccttgtccgcaa	Protospacer
******.***********.***********

23. spacer 1.20|1648346|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.933

gatatgctgtttctggttctaacgcttatc	CRISPR spacer
gatatgccgtttctggctctaacgcttatc	Protospacer
*******.********.*************

24. spacer 1.21|1648412|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 2, identity: 0.933

aagatatcgttaccattagccgcccaaaca	CRISPR spacer
aagatatcgttaccgtttgccgcccaaaca	Protospacer
**************.** ************

25. spacer 1.22|1648478|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.933

attaagggtatgatttgatgaaattcattg	CRISPR spacer
attaagggtatgatttgatgaaatttatcg	Protospacer
*************************.**.*

26. spacer 1.23|1647157|32|LR134320|PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 2, identity: 0.938

aaacgtggctggtacttcaggacgcaaataag	CRISPR spacer
aagcgtggctggtacttcaggacgcaaataac	Protospacer
**.****************************

27. spacer 1.23|1647157|32|LR134320|PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 2, identity: 0.938

aaacgtggctggtacttcaggacgcaaataag	CRISPR spacer
aagcgtggctggtacttcaggacgcaaataac	Protospacer
**.****************************

28. spacer 1.23|1647157|32|LR134320|PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 2, identity: 0.938

aaacgtggctggtacttcaggacgcaaataag	CRISPR spacer
aagcgtggctggtacttcaggacgcaaataac	Protospacer
**.****************************

29. spacer 2.1|1750141|32|LR134320|PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.938

attgagagacgctatagaatttctagaaactc	CRISPR spacer
gttgagagacgctatagaatttctagaagctc	Protospacer
.***************************.***

30. spacer 2.4|1750140|33|LR134320|CRISPRCasFinder,CRT matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.939

attgagagacgctatagaatttctagaaactca	CRISPR spacer
gttgagagacgctatagaatttctagaagctca	Protospacer
.***************************.****

31. spacer 2.11|1750568|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 2, identity: 0.939

catctaacgagattttgaaagaatatccaaccg	CRISPR spacer
catctaatgagattttaaaagaatatccaaccg	Protospacer
*******.********.****************

32. spacer 2.26|1751484|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 2, identity: 0.939

gctaactacaatttgtgcaggcgcagagccgta	CRISPR spacer
gctaaccacaatttgtgcaggcgcagaaccgta	Protospacer
******.********************.*****

33. spacer 1.9|1647620|30|LR134320|CRT,CRISPRCasFinder matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 3, identity: 0.9

gaaattacctctgaaatgtggggcactaaa	CRISPR spacer
gaaatcacttctgaaatgtggggcactaag	Protospacer
*****.**.********************.

34. spacer 1.15|1648016|30|LR134320|CRT,CRISPRCasFinder matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 3, identity: 0.9

cagtatgattaaagagctgacaaaagacag	CRISPR spacer
tagtatgattaaagagctaacaaaagatag	Protospacer
.*****************.********.**

35. spacer 1.15|1648016|30|LR134320|CRT,CRISPRCasFinder matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 3, identity: 0.9

cagtatgattaaagagctgacaaaagacag	CRISPR spacer
tagcgtgattaaagagctgacaaaagacag	Protospacer
.**..*************************

36. spacer 1.15|1648016|30|LR134320|CRT,CRISPRCasFinder matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 3, identity: 0.9

cagtatgattaaagagctgacaaaagacag	CRISPR spacer
tagcgtgattaaagagctgacaaaagacag	Protospacer
.**..*************************

37. spacer 1.22|1648478|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 3, identity: 0.9

attaagggtatgatttgatgaaattcattg	CRISPR spacer
attaaaggtatgatttgatgaaatttatcg	Protospacer
*****.*******************.**.*

38. spacer 1.23|1647157|32|LR134320|PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 3, identity: 0.906

aaacgtggctggtacttcaggacgcaaataag	CRISPR spacer
aagagtggctggtacttcaggacgcaaataac	Protospacer
**. ***************************

39. spacer 1.17|1648148|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 4, identity: 0.867

gacgagatgatagcgctagagtttaaagaa	CRISPR spacer
gacgagatgatagctctagagtttaaaacg	Protospacer
************** ************. .

40. spacer 1.17|1648148|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to NC_029030 (Streptococcus phage APCM01, complete genome) position: , mismatch: 4, identity: 0.867

gacgagatgatagcgctagagtttaaagaa	CRISPR spacer
gatgagatgatagcgctagaatttaaagcg	Protospacer
**.*****************.******* .

41. spacer 2.10|1750507|33|LR134320|CRISPRCasFinder,CRT matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 4, identity: 0.879

gttccatcagcatagcttttgtgctttcactga	CRISPR spacer
gcttcatcagcatagcttttgtgctgttactga	Protospacer
*.*.********************* *.*****

42. spacer 2.10|1750507|33|LR134320|CRISPRCasFinder,CRT matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 4, identity: 0.879

gttccatcagcatagcttttgtgctttcactga	CRISPR spacer
gtgtcaccagcatagcttttgtgctatcactga	Protospacer
** .**.****************** *******

43. spacer 1.13|1647884|30|LR134320|CRT,CRISPRCasFinder matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 5, identity: 0.833

acctgactaatcaagagcaagaatggaaaa	CRISPR spacer
atttaacaaaccaagagcaagaatggaaaa	Protospacer
*..*.** **.*******************

44. spacer 1.13|1647884|30|LR134320|CRT,CRISPRCasFinder matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 5, identity: 0.833

acctgactaatcaagagcaagaatggaaaa	CRISPR spacer
atttaacaaaccaagagcaagaatggaaaa	Protospacer
*..*.** **.*******************

45. spacer 1.13|1647884|30|LR134320|CRT,CRISPRCasFinder matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 5, identity: 0.833

acctgactaatcaagagcaagaatggaaaa	CRISPR spacer
atttaaccaaccaagagcaagaatggaaaa	Protospacer
*..*.**.**.*******************

46. spacer 1.15|1648016|30|LR134320|CRT,CRISPRCasFinder matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 5, identity: 0.833

cagtatgattaaagagctgacaaaagacag	CRISPR spacer
tagtatgattaaaaagctgacaaaaggtgg	Protospacer
.************.************...*

47. spacer 1.3|1647224|30|LR134320|CRT,CRISPRCasFinder matches to NC_031230 (Gordonia phage Yvonnetastic, complete genome) position: , mismatch: 6, identity: 0.8

atagacacattcatcaatgcccatgtagtt	CRISPR spacer
gtagcagcattcatcattgcccatgttgtt	Protospacer
.***  .********* ********* ***

48. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 6, identity: 0.8

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgattaattgctaaatgaaga	Protospacer
.****************** ****  * *

49. spacer 1.15|1648016|30|LR134320|CRT,CRISPRCasFinder matches to NC_014642 (Achromobacter xylosoxidans A8 plasmid pA82, complete sequence) position: , mismatch: 6, identity: 0.8

cagtat-gattaaagagctgacaaaagacag	CRISPR spacer
-ggcacggattgaagagctgtcaaaagacag	Protospacer
 .*.*. ****.******** **********

50. spacer 1.22|1648478|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MK448727 (Streptococcus phage Javan291, complete genome) position: , mismatch: 6, identity: 0.8

attaagggtatgatttgatgaaattcattg	CRISPR spacer
ataattcggatgatttaatgaaattcattg	Protospacer
** *   * *******.*************

51. spacer 2.2|1750202|32|LR134320|PILER-CR matches to MN693497 (Marine virus AFVG_25M179, complete genome) position: , mismatch: 6, identity: 0.812

gtctatttcattgtatttctcatc--gttcagtt	CRISPR spacer
gtctatttcattgtaatactcatctgattctg--	Protospacer
*************** * ******  .*** *

52. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
gaaagaaggtgataaattggtatttttaga	Protospacer
************* ********   *  *

53. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgataaattgttaaatgaaga	Protospacer
.************ ***** ****  * *

54. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
gaaagaaggtgataaattggtatttttaga	Protospacer
************* ********   *  *

55. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgataaattgttaaatgaaga	Protospacer
.************ ***** ****  * *

56. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
gaaagaaggtgataaattggtatttttaga	Protospacer
************* ********   *  *

57. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgataaattgttaaatgaaga	Protospacer
.************ ***** ****  * *

58. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
gaaagaaggtgataaattggtatttttaga	Protospacer
************* ********   *  *

59. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgataaattgttaaatgaaga	Protospacer
.************ ***** ****  * *

60. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP014218 (Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
atcataaagtgattacttggtaaaatatct	Protospacer
.  * **.******* ************ *

61. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP014147 (Clostridium botulinum strain CDC_67190 plasmid pNPD12_2, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
atcataaagtgattacttggtaaaatatct	Protospacer
.  * **.******* ************ *

62. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to CP033573 (Acinetobacter nosocomialis strain 2010N17-248 plasmid p2010N17-248, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaggaaggtgattatttggtaaattttta	Protospacer
.**.*********** ******** * *

63. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP014173 (Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
atcataaagtgattacttggtaaaatatct	Protospacer
.  * **.******* ************ *

64. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgataaattgttaaatgaaga	Protospacer
.************ ***** ****  * *

65. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 7, identity: 0.767

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
aaaagaaggtgataaattgttaaatgaaga	Protospacer
.************ ***** ****  * *

66. spacer 1.13|1647884|30|LR134320|CRT,CRISPRCasFinder matches to NZ_LT963411 (Pseudomonas syringae isolate CFBP3840 plasmid PP2, complete sequence) position: , mismatch: 7, identity: 0.767

acctgactaatcaagagcaagaatggaaaa	CRISPR spacer
gccacccccatcaatagcaagaatggaaaa	Protospacer
.**   *. ***** ***************

67. spacer 1.13|1647884|30|LR134320|CRT,CRISPRCasFinder matches to MN693026 (Marine virus AFVG_117M72, complete genome) position: , mismatch: 7, identity: 0.767

acctgactaatcaagagcaagaatggaaaa	CRISPR spacer
aagagtataaacaagaacaagaatggaaaa	Protospacer
*   *  *** *****.*************

68. spacer 1.24|1647224|31|LR134320|PILER-CR matches to NC_031230 (Gordonia phage Yvonnetastic, complete genome) position: , mismatch: 7, identity: 0.774

atagacacattcatcaatgcccatgtagttg	CRISPR spacer
gtagcagcattcatcattgcccatgttgttc	Protospacer
.***  .********* ********* ***

69. spacer 2.23|1751301|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NC_007486 (Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence) position: , mismatch: 7, identity: 0.788

gctctttcctcggaacttttgcaggaaacgtaa	CRISPR spacer
gccatttcctcgcaactttcgcaggaaaggaat	Protospacer
**. ******** ******.******** * *

70. spacer 2.25|1751423|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NC_008308 (Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence) position: , mismatch: 7, identity: 0.788

gcctaatgg-aacttatttcctgctcgacttacg	CRISPR spacer
-tatagcggcaacttatttcctgctcgatttgcg	Protospacer
 . **..** ******************.**.**

71. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to NC_020124 (Bacillus thuringiensis YBT-1518 plasmid pBMB0228, complete sequence) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
taattattaataatatgtaattcattttgt	Protospacer
  ***** .**************** *.

72. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MG770897 (Staphylococcus phage SH-St 15644, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

73. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to NC_011344 (Staphylococcus phage phi2958PVL, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

74. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MG029513 (Staphylococcus phage phiSa2wa_st72, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

75. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MH384261 (Staphylococcus phage SA137ruMSSAST121PVL, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

76. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to KY056620 (Staphylococcus phage P240, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

77. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MK801681 (Staphylococcus phage SAP11, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

78. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to NC_004616 (Staphylococcus prophage phi 12, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

79. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MG029511 (Staphylococcus phage phiSa2wa_st30, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

80. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to AF424782 (Staphylococcus aureus phage phi 12, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

81. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MK940809 (Staphylococcus phage Sa2wa_st8, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

82. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MF580410 (Staphylococcus phage phiSa2wa_st1, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

83. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to JQ779023 (Staphylococcus phage SMSAP5, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

84. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to KT186243 (Staphylococcus phage vB_SauS_phi2, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

85. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to AY954956 (Bacteriophage 3A, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

86. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to AP009363 (Staphylococcus phage phi2958PVL proviral DNA, complete seqeunce) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

87. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to KF598856 (Staphylococcus phage YMC/09/04/R1988, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

88. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to NC_007053 (Staphylococcus phage 3A, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

89. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to AY954957 (Bacteriophage 47, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

90. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MG029517 (Staphylococcus phage phiSa2wa_st93, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

91. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MG029516 (Staphylococcus phage phiSa2wa_st93mssa, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

92. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MK801680 (Staphylococcus phage SAP8, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

93. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to NC_007054 (Staphylococcus phage 47, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
aaaacatagataatatgtcagtcatatctt	Protospacer
. * .************* * *******.

94. spacer 1.7|1647488|30|LR134320|CRT,CRISPRCasFinder matches to MK448458 (Streptococcus satellite phage Javan373, complete genome) position: , mismatch: 8, identity: 0.733

gcattatagataatatgtaattcatatccg	CRISPR spacer
atctgaatgataatatctaattcatatcca	Protospacer
.. * *  ******** ************.

95. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to HG796274 (Uncultured bacterium plasmid pRGI00185) position: , mismatch: 8, identity: 0.733

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
ggtgagcgatgattaactggtaaaatatgt	Protospacer
*. ... *.*******.*************

96. spacer 1.11|1647752|30|LR134320|CRT,CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

gaaagaaggtgattaattggtaaaatatgt	CRISPR spacer
ttaagaatgtgattcattggtaaaaattta	Protospacer
  ***** ****** **********  *

97. spacer 1.15|1648016|30|LR134320|CRT,CRISPRCasFinder matches to MK448987 (Streptococcus phage Javan576, complete genome) position: , mismatch: 8, identity: 0.733

cagtatgattaaagagctgacaaaagacag	CRISPR spacer
tggagtgactaaagagctgacaaatgactt	Protospacer
..* .***.*************** ***

98. spacer 1.16|1648082|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MN694430 (Marine virus AFVG_250M44, complete genome) position: , mismatch: 8, identity: 0.733

actccgaaattcccaaaacttgcctctgct	CRISPR spacer
gtctgggaattcccaaaacttgcctttgat	Protospacer
.... *.******************.** *

99. spacer 1.16|1648082|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MN692992 (Marine virus AFVG_117M93, complete genome) position: , mismatch: 8, identity: 0.733

actccgaaattcccaaaacttgcctctgct	CRISPR spacer
gtctgggaattcccaaaacttgcctttgat	Protospacer
.... *.******************.** *

100. spacer 1.21|1648412|30|LR134320|CRT,CRISPRCasFinder,PILER-CR matches to MH618488 (Enterococcus phage vB_EfaS_HEf13, complete genome) position: , mismatch: 8, identity: 0.733

aagatatcgttaccattagccgcccaaaca	CRISPR spacer
gctgcagcgttaacaatagccgcccaaaca	Protospacer
.  ..* ***** ** **************

101. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MG770897 (Staphylococcus phage SH-St 15644, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

102. spacer 1.28|1647488|31|LR134320|PILER-CR matches to NC_011344 (Staphylococcus phage phi2958PVL, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

103. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MG029513 (Staphylococcus phage phiSa2wa_st72, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

104. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MH384261 (Staphylococcus phage SA137ruMSSAST121PVL, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

105. spacer 1.28|1647488|31|LR134320|PILER-CR matches to KY056620 (Staphylococcus phage P240, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

106. spacer 1.28|1647488|31|LR134320|PILER-CR matches to NC_004616 (Staphylococcus prophage phi 12, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

107. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MG029511 (Staphylococcus phage phiSa2wa_st30, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

108. spacer 1.28|1647488|31|LR134320|PILER-CR matches to AF424782 (Staphylococcus aureus phage phi 12, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

109. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MK940809 (Staphylococcus phage Sa2wa_st8, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

110. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MF580410 (Staphylococcus phage phiSa2wa_st1, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

111. spacer 1.28|1647488|31|LR134320|PILER-CR matches to KT186243 (Staphylococcus phage vB_SauS_phi2, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

112. spacer 1.28|1647488|31|LR134320|PILER-CR matches to AY954956 (Bacteriophage 3A, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

113. spacer 1.28|1647488|31|LR134320|PILER-CR matches to AP009363 (Staphylococcus phage phi2958PVL proviral DNA, complete seqeunce) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

114. spacer 1.28|1647488|31|LR134320|PILER-CR matches to KF598856 (Staphylococcus phage YMC/09/04/R1988, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

115. spacer 1.28|1647488|31|LR134320|PILER-CR matches to NC_007053 (Staphylococcus phage 3A, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

116. spacer 1.28|1647488|31|LR134320|PILER-CR matches to AY954957 (Bacteriophage 47, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

117. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MG029517 (Staphylococcus phage phiSa2wa_st93, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

118. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MG029516 (Staphylococcus phage phiSa2wa_st93mssa, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

119. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MK801680 (Staphylococcus phage SAP8, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

120. spacer 1.28|1647488|31|LR134320|PILER-CR matches to NC_007054 (Staphylococcus phage 47, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

121. spacer 1.28|1647488|31|LR134320|PILER-CR matches to MK801681 (Staphylococcus phage SAP11, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

122. spacer 1.28|1647488|31|LR134320|PILER-CR matches to JQ779023 (Staphylococcus phage SMSAP5, complete genome) position: , mismatch: 8, identity: 0.742

gcattatagataatatgtaattcatatccgg	CRISPR spacer
aaaacatagataatatgtcagtcatatcttg	Protospacer
. * .************* * *******. *

123. spacer 1.28|1647488|31|LR134320|PILER-CR matches to NC_020124 (Bacillus thuringiensis YBT-1518 plasmid pBMB0228, complete sequence) position: , mismatch: 9, identity: 0.71

gcattatagataatatgtaattcatatccgg	CRISPR spacer
taattattaataatatgtaattcattttgta	Protospacer
  ***** .**************** *.  .

124. spacer 2.2|1750202|32|LR134320|PILER-CR matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 9, identity: 0.719

gtctatttcattgtatttctcatcgttcagtt	CRISPR spacer
atctttttcattgtatttctcctcgcaaacaa	Protospacer
.*** **************** ***.  *

125. spacer 2.2|1750202|32|LR134320|PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.719

gtctatttcattgtatttctcatcgttcagtt	CRISPR spacer
agcaatttcactgtatttttcatcgttccacc	Protospacer
. * ******.*******.********* ...

126. spacer 2.5|1750201|33|LR134320|CRISPRCasFinder,CRT matches to MN693497 (Marine virus AFVG_25M179, complete genome) position: , mismatch: 9, identity: 0.727

gtctatttcattgtatttctcatcgttcagtta	CRISPR spacer
gtctatttcattgtaatactcatctgattctga	Protospacer
*************** * ******   .  * *

127. spacer 2.5|1750201|33|LR134320|CRISPRCasFinder,CRT matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 9, identity: 0.727

gtctatttcattgtatttctcatcgttcagtta	CRISPR spacer
atctttttcattgtatttctcctcgcaaacaaa	Protospacer
.*** **************** ***.  *   *

128. spacer 2.9|1750445|34|LR134320|CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.735

cataagatttgcaatttactaatatagagtaata	CRISPR spacer
cataagatttacaatttactaaaatatatcggcg	Protospacer
**********.*********** *** * .....

129. spacer 2.14|1750752|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to AP013379 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C43) position: , mismatch: 9, identity: 0.727

caaatcccgaaaaactttaaagcttgttctgcg	CRISPR spacer
tagttgtaaaaaaactttaaagcttgtagtgcg	Protospacer
.*. * . .******************  ****

130. spacer 2.24|1751362|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021045 (Phaeobacter gallaeciensis strain P129 plasmid pP129_e, complete sequence) position: , mismatch: 9, identity: 0.727

ccagcaaacaaagcgccccgagcgggtgacttg	CRISPR spacer
ctccaaaagatagcgccccgagcgggtgacccc	Protospacer
*.   *** * *******************..

131. spacer 2.24|1751362|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010678 (Phaeobacter gallaeciensis strain P75 plasmid pP75_e, complete sequence) position: , mismatch: 9, identity: 0.727

ccagcaaacaaagcgccccgagcgggtgacttg	CRISPR spacer
ctccaaaagatagcgccccgagcgggtgacccc	Protospacer
*.   *** * *******************..

132. spacer 2.24|1751362|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NC_023142 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_F69, complete sequence) position: , mismatch: 9, identity: 0.727

ccagcaaacaaagcgccccgagcgggtgacttg	CRISPR spacer
ctccaaaagatagcgccccgagcgggtgacccc	Protospacer
*.   *** * *******************..

133. spacer 2.24|1751362|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010789 (Phaeobacter gallaeciensis strain P63 plasmid pP63_e, complete sequence) position: , mismatch: 9, identity: 0.727

ccagcaaacaaagcgccccgagcgggtgacttg	CRISPR spacer
ctccaaaagatagcgccccgagcgggtgacccc	Protospacer
*.   *** * *******************..

134. spacer 2.24|1751362|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010642 (Phaeobacter gallaeciensis strain P73 plasmid pP73_f, complete sequence) position: , mismatch: 9, identity: 0.727

ccagcaaacaaagcgccccgagcgggtgacttg	CRISPR spacer
ctccaaaagatagcgccccgagcgggtgacccc	Protospacer
*.   *** * *******************..

135. spacer 2.24|1751362|33|LR134320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010593 (Phaeobacter gallaeciensis strain P11 plasmid pP11_e, complete sequence) position: , mismatch: 9, identity: 0.727

ccagcaaacaaagcgccccgagcgggtgacttg	CRISPR spacer
ctccaaaagatagcgccccgagcgggtgacccc	Protospacer
*.   *** * *******************..

136. spacer 2.5|1750201|33|LR134320|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 10, identity: 0.697

gtctatttcattgtatttctcatcgttcagtta	CRISPR spacer
agcaatttcactgtatttttcatcgttccacct	Protospacer
. * ******.*******.********* ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23654 : 80509

Bacillus_phage(23.53%)

protease,bacteriocin,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEF17906.1\|23654_24386_-\|bacteriocin	bacteriocin operon protein ScnG homolog	NA	NA	NA	NA
VEF17907.1\|24385_25138_-\|bacteriocin	bacteriocin operon component, ScnE-like protein	NA	NA	NA	NA
VEF17908.1\|25139_26048_-\|bacteriocin	bacteriocin component ScnF-like protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-39	44.9
VEF17909.1\|26335_27592_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	1.5e-128	56.6
VEF17910.1\|28007_28118_+\|transposase	transposase fragment	NA	NA	NA	NA
VEF17911.1\|28170_29550_-	histidine kinase	W8CYF6	Bacillus_phage	2.6e-12	25.9
VEF17912.1\|29567_30266_-	response regulator	W8CYM9	Bacillus_phage	1.7e-28	33.0
VEF17913.1\|31868_33308_-\|tRNA	glutamyl-tRNA(Gln) amidotransferase subunit B	NA	NA	NA	NA
VEF17914.1\|33307_34774_-\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	NA	NA	NA	NA
VEF17915.1\|34773_35076_-\|tRNA	asparaginyl/glutamyl-tRNA amidotransferase subunit C	NA	NA	NA	NA
VEF17916.1\|35203_36955_-\|tRNA	aspartyl-tRNA ligase	A0A2K9L0E9	Tupanvirus	4.4e-17	32.1
VEF17917.1\|37212_37764_-	pyrazinamidase/nicotinamidase	G3MA16	Bacillus_virus	8.3e-23	36.3
VEF17918.1\|37765_38551_-	transcriptional repressor CodY	NA	NA	NA	NA
VEF17919.1\|38659_39874_-	aminotransferase AlaT	NA	NA	NA	NA
VEF17920.1\|40050_40587_+	biotin biosynthesis protein	NA	NA	NA	NA
VEF17921.1\|40684_41134_+	universal stress protein	NA	NA	NA	NA
VEF17922.1\|41411_42812_-	haloacid dehalogenase-like hydrolase	A0A0H3UZF4	Geobacillus_virus	5.0e-24	37.7
VEF17923.1\|42911_43829_+	L-asparaginase	NA	NA	NA	NA
VEF17924.1\|43855_44020_+	Uncharacterised protein	NA	NA	NA	NA
VEF17925.1\|44162_46178_-	ATP-dependent DNA helicase, RecG	NA	NA	NA	NA
VEF17926.1\|46351_47467_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	3.4e-31	31.2
VEF17927.1\|47463_47823_-	4'-phosphopantetheinyl transferase	NA	NA	NA	NA
VEF17928.1\|48092_49127_-	phospho-2-dehydro-3-deoxyheptonate aldolase	S4W5F1	Pandoravirus	3.3e-41	33.8
VEF17929.1\|49128_50160_-	DAHP synthase	S4W5F1	Pandoravirus	1.1e-44	34.4
VEF17930.1\|50179_52699_-	preprotein translocase subunit SecA	NA	NA	NA	NA
VEF17931.1\|52875_53826_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
VEF17932.1\|53994_54876_-	fructokinase	NA	NA	NA	NA
VEF17933.1\|55075_57070_-	PTS system sucrose-specific transporter subunits IIBCA	NA	NA	NA	NA
VEF17934.1\|57265_58705_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	5.7e-15	24.4
VEF17935.1\|58707_59670_+	sucrose operon repressor	NA	NA	NA	NA
VEF17936.1\|59863_60292_-	transcription termination factor	NA	NA	NA	NA
VEF17937.1\|60284_60674_-	Alkaline shock protein	NA	NA	NA	NA
VEF17938.1\|60716_61277_-	elongation factor P	NA	NA	NA	NA
VEF17939.1\|61416_62121_+	potassium channel family protein	NA	NA	NA	NA
VEF17940.1\|62168_62621_-	deoxycytidylate deaminase	A7KUY9	Bacillus_phage	7.3e-33	55.6
VEF17941.1\|62782_63847_-	aminopeptidase	A0A0P0I8D7	Acinetobacter_phage	5.9e-17	25.9
VEF17942.1\|63836_66668_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.8e-310	55.4
VEF17943.1\|67338_68283_+	magnesium/cobalt transport protein	NA	NA	NA	NA
VEF17944.1\|68436_69099_+	membrane protein	NA	NA	NA	NA
VEF17945.1\|69192_69594_+	LytTr DNA-binding domain-containing protein	NA	NA	NA	NA
VEF17946.1\|69590_70277_+	putative uncharacterized conserved secreted protein	NA	NA	NA	NA
VEF17947.1\|70284_71004_-	TraX family protein	NA	NA	NA	NA
VEF17948.1\|71322_71562_-	SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent	NA	NA	NA	NA
VEF17949.1\|71591_72086_-	single-stranded DNA-binding protein	A0A286QNX2	Streptococcus_phage	1.8e-56	70.5
VEF17950.1\|72103_72394_-	30S ribosomal protein S6	NA	NA	NA	NA
VEF17951.1\|72549_72795_-	Uncharacterised protein	NA	NA	NA	NA
VEF17952.1\|73099_73303_+	Uncharacterised protein	NA	NA	NA	NA
VEF17953.1\|74340_75486_+	A/G-specific DNA glycosylase	NA	NA	NA	NA
VEF17954.1\|75677_76727_-	alcohol dehydrogenase	NA	NA	NA	NA
VEF17955.1\|76824_77139_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.1e-16	46.2
VEF17956.1\|77213_79544_-	DNA mismatch repair protein	Q94M10	Lactobacillus_phage	1.6e-22	50.9
VEF17957.1\|79762_80509_-\|protease	CAAX amino terminal protease	NA	NA	NA	NA

DBSCAN-SWA_2

494312 : 557782

Cafeteria_roenbergensis_virus(16.67%)

bacteriocin,transposase,integrase,tRNA,protease

attL 513220:513234|attR 560684:560698

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEF18322.1\|494312_494759_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
VEF18323.1\|495088_497794_+	dextranase precursor	NA	NA	NA	NA
VEF18324.1\|498139_498853_-	transcriptional regulator	NA	NA	NA	NA
VEF18325.1\|499026_500994_+	PTS system trehalose-specific transporter subunits IIBCA	NA	NA	NA	NA
VEF18326.1\|501019_502648_+	trehalose-6-phosphate hydrolase TreA	NA	NA	NA	NA
VEF18327.1\|503196_505092_+	peptidase	E3T4I7	Cafeteria_roenbergensis_virus	5.2e-64	28.6
VEF18328.1\|505237_506194_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEF18329.1\|506984_508838_+	Predicted membrane protein	NA	NA	NA	NA
VEF18330.1\|509026_509812_+	30S ribosomal protein S2	NA	NA	NA	NA
VEF18331.1\|509878_510925_+	elongation factor Ts	NA	NA	NA	NA
VEF18332.1\|511455_512535_+	3-oxoacyl-[acyl-carrier-protein] synthase,KASIII	NA	NA	NA	NA
VEF18333.1\|512549_513761_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
513220:513234	attL	NA	NA	NA	NA
VEF18334.1\|513761_514208_+	Predicted nucleic-acid-binding protein containing a Zn-ribbon	NA	NA	NA	NA
VEF18335.1\|514214_517289_+	bacitracin synthetase 1	A0A2K9KZV5	Tupanvirus	8.4e-64	26.0
VEF18336.1\|517292_520034_+	polyketide synthase	D0R7J2	Paenibacillus_phage	2.0e-40	35.8
VEF18337.1\|520222_520726_-	Uncharacterised protein	NA	NA	NA	NA
VEF18338.1\|520855_521398_+	transcriptional regulator	NA	NA	NA	NA
VEF18339.1\|521539_522082_-	transcriptional regulator	NA	NA	NA	NA
VEF18340.1\|522260_524057_+	permease	NA	NA	NA	NA
VEF18341.1\|524262_524601_-	putative small multi-drug export proteins	NA	NA	NA	NA
VEF18342.1\|524631_524727_-	putative small multi-drug export proteins	NA	NA	NA	NA
VEF18343.1\|524898_525363_+	transcriptional repressor CtsR	NA	NA	NA	NA
VEF18344.1\|525359_527801_+\|protease	class III stress response-related ATP-dependent Clp protease, ATP-binding subunit	A0A2C9CXH0	Yersinia_phage	2.0e-121	42.1
VEF18345.1\|528086_530474_+	beta-D-fructosyltransferase	NA	NA	NA	NA
VEF18346.1\|530663_531350_-	transcriptional regulator	E8ZDN4	Streptococcus_phage	2.6e-66	52.7
VEF18347.1\|531669_531978_+	SSU ribosomal protein S10p (S20e)	NA	NA	NA	NA
VEF18348.1\|532212_532839_+	LSU ribosomal protein L3p (L3e)	NA	NA	NA	NA
VEF18349.1\|532863_533487_+	50S ribosomal protein L4	NA	NA	NA	NA
VEF18350.1\|533486_533786_+	50S ribosomal protein L23	NA	NA	NA	NA
VEF18351.1\|533803_534637_+	50S ribosomal protein L2	NA	NA	NA	NA
VEF18352.1\|534738_535017_+	30S ribosomal protein S19	NA	NA	NA	NA
VEF18353.1\|535033_535378_+	LSU ribosomal protein L22p (L17e)	NA	NA	NA	NA
VEF18354.1\|535390_536044_+	SSU ribosomal protein S3p (S3e)	NA	NA	NA	NA
VEF18355.1\|536047_536461_+	LSU ribosomal protein L16p (L10e)	NA	NA	NA	NA
VEF18356.1\|536470_536680_+	50S ribosomal protein L29	NA	NA	NA	NA
VEF18357.1\|536700_536961_+	SSU ribosomal protein S17p (S11e)	NA	NA	NA	NA
VEF18358.1\|536987_537356_+	LSU ribosomal protein L14p (L23e)	NA	NA	NA	NA
VEF18359.1\|537521_537827_+	LSU ribosomal protein L24p (L26e)	NA	NA	NA	NA
VEF18360.1\|537850_538393_+	LSU ribosomal protein L5p (L11e)	NA	NA	NA	NA
VEF18361.1\|538849_539248_+	30S ribosomal protein S8	NA	NA	NA	NA
VEF18362.1\|539661_540198_+	50S ribosomal protein L6	NA	NA	NA	NA
VEF18363.1\|540287_540644_+	50S ribosomal protein L18	NA	NA	NA	NA
VEF18364.1\|540662_541157_+	SSU ribosomal protein S5p (S2e)	NA	NA	NA	NA
VEF18365.1\|541170_541353_+	50S ribosomal protein L30	NA	NA	NA	NA
VEF18366.1\|541645_542086_+	50S ribosomal protein L15	NA	NA	NA	NA
VEF18367.1\|542085_543390_+	preprotein translocase subunit SecY	NA	NA	NA	NA
VEF18368.1\|543619_544258_+	adenylate kinase	NA	NA	NA	NA
VEF18369.1\|544376_544595_+	translation initiation factor IF-1	NA	NA	NA	NA
VEF18370.1\|544620_544737_+	LSU ribosomal protein L36p	NA	NA	NA	NA
VEF18371.1\|544756_545122_+	SSU ribosomal protein S13p (S18e)	NA	NA	NA	NA
VEF18372.1\|545139_545523_+	SSU ribosomal protein S11p (S14e)	NA	NA	NA	NA
VEF18373.1\|545568_546507_+	DNA-directed RNA polymerase alpha subunit	NA	NA	NA	NA
VEF18374.1\|546525_546912_+	LSU ribosomal protein L17p	NA	NA	NA	NA
VEF18375.1\|547137_548424_+	gamma-glutamylcysteine synthetase putative	NA	NA	NA	NA
VEF18376.1\|554881_555100_-\|integrase	integrase	A0A2D1GPE8	Lactobacillus_phage	3.9e-08	41.2
VEF18377.1\|555762_556017_-\|integrase	putative integrase	NA	NA	NA	NA
VEF18378.1\|556218_556407_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEF18379.1\|556442_556835_-	phosphoglycolate phosphatase	NA	NA	NA	NA
VEF18380.1\|556929_557445_-\|transposase	putative transposase	NA	NA	NA	NA
VEF18381.1\|557677_557782_-\|transposase	putative transposase	NA	NA	NA	NA
560684:560698	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1232300 : 1239149

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEF18999.1\|1232300_1232789_-	7-cyano-7-deazaguanine reductase	E7DN65	Pneumococcus_phage	5.6e-47	57.9
VEF19000.1\|1232801_1233518_-	pyruvate-formate lyase-activating enzyme	E7DN68	Pneumococcus_phage	1.4e-62	48.0
VEF19001.1\|1233514_1233961_-	6-pyruvoyl-tetrahydropterin synthase	J9PV91	Bacillus_phage	3.8e-42	60.6
VEF19002.1\|1233960_1234614_-	ATPase, confers aluminum resistance	A0A2H4J8Q7	uncultured_Caudovirales_phage	5.9e-60	52.8
VEF19003.1\|1235164_1235599_+	transcriptional regulator	NA	NA	NA	NA
VEF19004.1\|1235602_1237405_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-32	24.7
VEF19005.1\|1237394_1239149_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.1e-43	27.8

DBSCAN-SWA_4

1385683 : 1394467

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEF19146.1\|1385683_1387399_+	putative phosphoglucomutase	A0A1X9I671	Streptococcus_phage	7.5e-272	82.5
VEF19147.1\|1387529_1389275_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.6e-54	29.2
VEF19148.1\|1389271_1391005_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.9e-39	25.8
VEF19149.1\|1391014_1391629_-	transposon-like protein	A0A223LKM8	Bacillus_phage	1.2e-22	37.6
VEF19150.1\|1391630_1392608_-	Pseudouridylate synthases, 23S RNA-specific	NA	NA	NA	NA
VEF19151.1\|1392604_1393867_-	serine hydroxymethyltransferase	A0A219YB23	Aeromonas_phage	1.3e-98	52.1
VEF19152.1\|1393876_1394467_-	putative translation factor	A0A291ATS8	Pandoravirus	6.2e-16	33.2

DBSCAN-SWA_5

1888876 : 1902786

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEF20261.1\|1888876_1889770_+	putative exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.8e-123	76.9
VEF20267.1\|1889834_1890458_-	endonuclease III	NA	NA	NA	NA
VEF20272.1\|1890522_1890876_-	arsenate reductase	M1PLC0	Streptococcus_phage	4.8e-40	67.0
VEF20278.1\|1890912_1891407_-	methylated-DNA--protein-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	5.7e-47	56.7
VEF20283.1\|1891495_1892677_-	D-3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.8e-179	79.3
VEF20289.1\|1892762_1893317_-	acetyltransferase	M1PSC3	Streptococcus_phage	4.7e-50	63.9
VEF20294.1\|1893725_1894817_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	1.2e-169	79.3
VEF20301.1\|1895036_1895378_-	nitrogen regulatory protein PII	NA	NA	NA	NA
VEF20306.1\|1895393_1896629_-	ammonium transporter	NA	NA	NA	NA
VEF20312.1\|1896934_1897801_-	putative methylase	M1PLC5	Streptococcus_phage	1.7e-115	73.9
VEF20321.1\|1897806_1898139_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	6.1e-29	58.2
VEF20323.1\|1898131_1898938_-	signal peptidase II	NA	NA	NA	NA
VEF20325.1\|1898934_1899810_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.6e-79	54.1
VEF20327.1\|1899822_1900461_-	thymidylate kinase	M1PSC7	Streptococcus_phage	3.4e-76	65.6
VEF20329.1\|1900536_1901196_-	acetoin utilization protein, acetoin dehydrogenase	M1NSC5	Streptococcus_phage	8.6e-67	60.6
VEF20331.1\|1901311_1902022_-	putative branched chain amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-19	28.9
VEF20333.1\|1902021_1902786_-	branched-chain amino acid ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-16	26.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134320

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection