Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134338 Brevibacillus brevis strain NCTC2611 genome assembly, chromosome: 1 1 crisprs cas3,csa3,WYL,DEDDh,RT,DinG,cas14j 0 1 12 0

Results visualization

1. LR134338
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134338_1 4256728-4256810 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134338_1 1.1|4256751|37|LR134338|CRISPRCasFinder 4256751-4256787 37 NZ_CP010270 Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence 24055-24091 4 0.892
LR134338_1 1.1|4256751|37|LR134338|CRISPRCasFinder 4256751-4256787 37 NZ_CP010270 Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence 57395-57431 4 0.892
LR134338_1 1.1|4256751|37|LR134338|CRISPRCasFinder 4256751-4256787 37 NZ_CP010270 Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence 20905-20941 4 0.892
LR134338_1 1.1|4256751|37|LR134338|CRISPRCasFinder 4256751-4256787 37 NC_017543 Paenibacillus polymyxa M1 plasmid pPPM1a, complete sequence 340123-340159 5 0.865
LR134338_1 1.1|4256751|37|LR134338|CRISPRCasFinder 4256751-4256787 37 NC_019898 Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence 109364-109400 6 0.838
LR134338_1 1.1|4256751|37|LR134338|CRISPRCasFinder 4256751-4256787 37 NZ_CP013208 Paenibacillus sp. IHB B 3084 plasmid pHD05, complete sequence 22147-22183 8 0.784

1. spacer 1.1|4256751|37|LR134338|CRISPRCasFinder matches to NZ_CP010270 (Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence) position: , mismatch: 4, identity: 0.892

gaaaaataaagtgttagactcggaaaat--agttgaaga	CRISPR spacer
gaaaaataaagtgttagactcgggaaataaagttgta--	Protospacer
***********************.****  ***** *  

2. spacer 1.1|4256751|37|LR134338|CRISPRCasFinder matches to NZ_CP010270 (Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence) position: , mismatch: 4, identity: 0.892

gaaaaataaagtgttagactcggaaa--atagttgaaga	CRISPR spacer
gaaaaataaagtgttagactcagaaaatatagttgta--	Protospacer
*********************.****  ******* *  

3. spacer 1.1|4256751|37|LR134338|CRISPRCasFinder matches to NZ_CP010270 (Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence) position: , mismatch: 4, identity: 0.892

gaaaaataaagtgttagactcggaaa--atagttgaaga	CRISPR spacer
gaaaaataaagtattagactcggaaaagatagttgta--	Protospacer
************.*************  ******* *  

4. spacer 1.1|4256751|37|LR134338|CRISPRCasFinder matches to NC_017543 (Paenibacillus polymyxa M1 plasmid pPPM1a, complete sequence) position: , mismatch: 5, identity: 0.865

gaaaaataaagtgttagactcggaaaat--agttgaaga	CRISPR spacer
caaacataaagtgttagactcggaaaataaagttgta--	Protospacer
 *** ***********************  ***** *  

5. spacer 1.1|4256751|37|LR134338|CRISPRCasFinder matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 6, identity: 0.838

gaaaaataaagtgttagactcggaaaat--agttgaaga	CRISPR spacer
agaaaataaagtattagactcggaaaataaagttgta--	Protospacer
..**********.***************  ***** *  

6. spacer 1.1|4256751|37|LR134338|CRISPRCasFinder matches to NZ_CP013208 (Paenibacillus sp. IHB B 3084 plasmid pHD05, complete sequence) position: , mismatch: 8, identity: 0.784

gaaaaataaagtgttagactcggaaaatagttgaaga	CRISPR spacer
gaaaaataaagtgttagactcaaaaaataaagtatta	Protospacer
*********************..******.   *  *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 282604 : 323629 58 Vibrio_phage(17.86%) tRNA,capsid,plate,protease,tail,portal NA
DBSCAN-SWA_2 432400 : 475507 60 uncultured_Caudovirales_phage(27.27%) protease,transposase,tail,head NA
DBSCAN-SWA_3 927136 : 971340 61 Paenibacillus_phage(23.68%) capsid,plate,protease,tail,portal NA
DBSCAN-SWA_4 1247189 : 1299262 75 Paenibacillus_phage(22.22%) capsid,plate,protease,tail,portal NA
DBSCAN-SWA_5 1718287 : 1769171 39 Moraxella_phage(50.0%) protease,coat,tail NA
DBSCAN-SWA_6 2247564 : 2254435 8 Arthrobacter_phage(33.33%) protease NA
DBSCAN-SWA_7 4022702 : 4096411 89 Paenibacillus_phage(50.0%) tRNA,capsid,terminase,holin,protease,tail,portal,head NA
DBSCAN-SWA_8 4275870 : 4316461 35 Moraxella_phage(40.0%) protease,coat,tRNA NA
DBSCAN-SWA_9 5604029 : 5612358 7 Prochlorococcus_phage(16.67%) NA NA
DBSCAN-SWA_10 5995619 : 6010309 21 Vibrio_phage(41.67%) tail,plate,holin NA
DBSCAN-SWA_11 6026130 : 6034169 14 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_12 6658681 : 6675195 16 Bacillus_phage(40.0%) tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage