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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134343 Moraxella cuniculi strain NCTC10297 genome assembly, chromosome: 1 1 crisprs csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas5,cas7f,cas3f,cas1,cas3,DEDDh,csa3 0 17 0 0

Results visualization

1. LR134343
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134343_2 500934-502942 Unclear I-F
33 spacers
cas1,cas3f,cas7f,cas5,cas6f

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 JQ015307 Pectobacterium phage phiTE, complete genome 118574-118605 5 0.844
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KY514263 Pectobacterium phage vB_PatM_CB7, complete genome 10220-10251 5 0.844
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 NZ_CP031279 Staphylococcus hominis strain 19A plasmid unnamed2, complete sequence 20777-20808 6 0.812
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 MT774383 CrAssphage cr11_1, complete genome 58646-58677 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MF158042 Shigella phage Sd1, complete genome 31621-31652 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 AF151091 Prophage P-EibA J protein-like protein (J) gene, partial cds; and Lom (lom), ORF-401-like protein (orf-401), ORF-191A (orf-191A), immunoglobulin-binding protein EibA (eibA), ORF-156A (orf-156A), ORF-60A (orf-60A), and EaaA (eaaA) genes, complete cds 1849-1880 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MN855617 Myoviridae sp. isolate 527, complete genome 7459-7490 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KC954774 Cronobacter phage CR8, complete genome 11148-11179 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MN395285 Klebsiella phage PhiKpNIH-10, complete genome 44-75 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MN395285 Klebsiella phage PhiKpNIH-10, complete genome 8-39 6 0.812
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MF612072 Klebsiella phage MezzoGao, complete genome 33-64 6 0.812
LR134343_1 1.1|434399|28|LR134343|CRISPRCasFinder 434399-434426 28 NZ_CP046571 Xanthomonas albilineans strain Xa-FJ1 plasmid pXaFJ1, complete sequence 2448-2475 7 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MF158039 Shigella phage Sf12, complete genome 35565-35596 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_017974 Cronobacter phage CR3, complete genome 11146-11177 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MF042360 Pseudomonas phage Phabio, complete genome 159552-159583 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_019718 Enterobacteria phage vB_EcoS_Rogue1, complete genome 10124-10155 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KR296684 UNVERIFIED: Salmonella phage 19, complete genome 9941-9972 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MF417874 Uncultured Caudovirales phage clone 3S_14, partial genome 26212-26243 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_029072 Salmonella phage 19, complete genome 9941-9972 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KR296695 UNVERIFIED: Salmonella phage 41, complete genome 9949-9980 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NZ_CP006906 Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence 18578-18609 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MK448874 Streptococcus phage Javan206, complete genome 31278-31309 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_022968 Enterobacteria phage 4MG, complete genome 50143-50174 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_011282 Klebsiella variicola strain 342 plasmid pKP187, complete sequence 91011-91042 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MH533020 Acinetobacter phage ABPH49, complete genome 6654-6685 7 0.781
LR134343_2 2.7|501322|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501322-501353 32 NZ_CP013927 Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence 90059-90090 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_AP017382 Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence 45485-45516 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP024188 Moraxella osloensis strain TT16 plasmid p3, complete sequence 19547-19578 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP024179 Moraxella osloensis strain YHS plasmid pYHS3, complete sequence 19895-19926 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_KM406490 Salmonella enterica subsp. enterica serovar Typhimurium strain 202 plasmid pSEM, complete sequence 47773-47804 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_KP294351 Escherichia coli strain CZD1527 plasmid pIGT15, complete sequence 41796-41827 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_KU315015 Serratia marcescens strain NCTC 50331 plasmid R1215, complete sequence 52852-52883 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NC_024997 Klebsiella oxytoca plasmid pACM1, complete sequence 85225-85256 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 KP294350 Uncultured bacterium plasmid pARM26, complete sequence 43626-43657 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_LT985264 Escherichia coli strain 717 plasmid RCS51TR717_p, complete sequence 35985-36016 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP017904 Vibrio alginolyticus strain K05K4 plasmid pL289, complete sequence 248082-248113 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP017901 Vibrio alginolyticus strain K04M5 plasmid pL294, complete sequence 253738-253769 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP017909 Vibrio alginolyticus strain K06K5 plasmid pL291, complete sequence 250302-250333 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP017893 Vibrio alginolyticus strain K04M1 plasmid pL280, complete sequence 239631-239662 7 0.781
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP017898 Vibrio alginolyticus isolate K04M3 plasmid pL294, complete sequence 253103-253134 7 0.781
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_042038 Enterobacteriophage phiKP26, complete genome 9658-9689 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KT825490 Escherichia phage C119, complete genome 1806-1837 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_019718 Enterobacteria phage vB_EcoS_Rogue1, complete genome 10544-10575 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_007291 Enterobacteria phage JK06, complete genome 15185-15216 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 DQ121662 Escherichia virus Jk06, complete genome 15185-15216 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MH576968 Streptomyces phage Wofford, complete genome 74066-74097 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MN395285 Klebsiella phage PhiKpNIH-10, complete genome 49413-49444 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MN334766 Serratia phage PCH45, complete genome 119836-119867 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MH892353 Streptococcus phage SW2, complete genome 18752-18783 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KY705288 Streptococcus phage P9901, complete genome 16878-16909 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MG552615 Klebsiella virus GML-KpCol1, complete genome 27622-27653 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 KT717083 Streptococcus phage 73, complete genome 16876-16907 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MH973661 Streptococcus phage SW5, complete genome 18613-18644 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 GU070616 Salmonella phage PVP-SE1, complete genome 52785-52816 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 JX181824 Salmonella phage SSE-121, complete genome 14519-14550 8 0.75
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_003390 Synechococcus phage P60, complete genome 39087-39118 8 0.75
LR134343_2 2.11|501562|31|LR134343|PILER-CR,CRISPRCasFinder,CRT 501562-501592 31 MF805809 Escherichia phage vB_EcoM_PHB05, complete genome 75642-75672 8 0.742
LR134343_2 2.13|501681|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501681-501712 32 NZ_CP033099 Staphylococcus warneri strain SWO plasmid unnamed1, complete sequence 13051-13082 8 0.75
LR134343_2 2.13|501681|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501681-501712 32 NZ_CP033099 Staphylococcus warneri strain SWO plasmid unnamed1, complete sequence 17078-17109 8 0.75
LR134343_2 2.22|502222|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502222-502253 32 NC_004688 Mycobacterium phage Omega, complete genome 85735-85766 8 0.75
LR134343_2 2.22|502222|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502222-502253 32 AY129338 Mycobacterium virus Omega, complete genome 85735-85766 8 0.75
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_CP014235 Moraxella osloensis strain CCUG 350 plasmid unnamed4, complete sequence 33465-33496 8 0.75
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 KM262192 Leuconostoc phage Ln-9, complete genome 18775-18806 8 0.75
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 75784-75815 8 0.75
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 NZ_CP019364 Borrelia turicatae 91E135 isolate Oz1 plasmid lpB34, complete sequence 20454-20485 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 NZ_CP038185 Staphylococcus aureus strain MJ015 plasmid unnamed2, complete sequence 627-658 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 NZ_CP015635 Borrelia turicatae strain BTE5EL plasmid lp44 22005-22036 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 AP013409 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C105A-MedDCM-OCT-S28-C49 6482-6513 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 MN694105 Marine virus AFVG_250M210, complete genome 13561-13592 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 MG945554 UNVERIFIED: Microviridae sp. isolate 3163-1602, complete genome 947-978 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 MN694723 Marine virus AFVG_250M211, complete genome 18784-18815 9 0.719
LR134343_2 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501202-501233 32 MN694661 Marine virus AFVG_250M209, complete genome 13767-13798 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 LC487410 Vibrio phage KIT04 DNA, complete genome 91421-91452 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MF612072 Klebsiella phage MezzoGao, complete genome 1-28 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MK448834 Streptococcus phage Javan91, complete genome 32139-32170 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MH622943 Myoviridae sp. isolate ctbc_4, complete genome 27993-28024 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 JN882284 Cronobacter phage vB_CsaM_GAP31, complete genome 100455-100486 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MK449009 Streptococcus phage Javan88, complete genome 33843-33874 9 0.719
LR134343_2 2.10|501502|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501502-501533 32 NC_013164 Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence 36138-36169 9 0.719
LR134343_2 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501861-501892 32 NZ_KU356480 Vibrio parahaemolyticus strain VPS92 plasmid pVPS92-VEB, complete sequence 91181-91212 9 0.719
LR134343_2 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501861-501892 32 NZ_CP053812 Vibrio cholerae strain W6G plasmid pW6G, complete sequence 216294-216325 9 0.719
LR134343_2 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501861-501892 32 NZ_CP053815 Vibrio cholerae strain W7G plasmid pW7G, complete sequence 172126-172157 9 0.719
LR134343_2 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501861-501892 32 NZ_LN831184 Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence 24087-24118 9 0.719
LR134343_2 2.20|502102|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 502102-502133 32 AP014367 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C79, *** SEQUENCING IN PROGRESS *** 27081-27112 9 0.719
LR134343_2 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502282-502313 32 NZ_CP009640 Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence 54789-54820 9 0.719
LR134343_2 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502282-502313 32 NZ_CP053961 Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence 2743-2774 9 0.719
LR134343_2 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502282-502313 32 KX119177 Helicobacter phage SwA626G, complete genome 3548-3579 9 0.719
LR134343_2 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502282-502313 32 KX119204 Helicobacter phage Sw577G, complete genome 3476-3507 9 0.719
LR134343_2 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502462-502493 32 NZ_CP050068 Klebsiella aerogenes strain 035 plasmid p35, complete sequence 199569-199600 9 0.719
LR134343_2 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502462-502493 32 NZ_CP029448 Serratia marcescens strain CAV1761 plasmid pCAV1761-205, complete sequence 141845-141876 9 0.719
LR134343_2 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502462-502493 32 MN310380 Raoultella ornithinolytica strain 170602815 plasmid p602815-NR, complete sequence 24226-24257 9 0.719
LR134343_2 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502462-502493 32 NZ_CP011641 Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence 173092-173123 9 0.719
LR134343_2 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502582-502613 32 NZ_CP013193 Escherichia coli strain FORC_031 plasmid pFORC31.3, complete sequence 42454-42485 9 0.719
LR134343_2 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502582-502613 32 NC_009788 Escherichia coli O139:H28 str. E24377A plasmid pETEC_73, complete sequence 35337-35368 9 0.719
LR134343_2 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502582-502613 32 NC_014234 Escherichia coli ETEC 1392/75 plasmid p746, complete sequence 6718-6749 9 0.719
LR134343_2 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502582-502613 32 NC_007635 Escherichia coli plasmid pCoo, complete sequence 8971-9002 9 0.719
LR134343_2 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502703-502734 32 MN693472 Marine virus AFVG_25M86, complete genome 24844-24875 9 0.719
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MT066160 Vibrio phage Saratov-12, complete genome 4519-4550 10 0.688
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_025416 Staphylococcus phage MCE-2014, complete genome 10851-10882 10 0.688
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 NC_023610 Erwinia phage PhiEaH1, complete genome 69821-69852 10 0.688
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MT767883 Vibrio phage Saratov-15, complete genome 10829-10860 10 0.688
LR134343_2 2.12|501621|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501621-501652 32 NZ_AP019842 Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p1, complete sequence 30700-30731 10 0.688
LR134343_2 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502282-502313 32 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 603437-603468 10 0.688
LR134343_2 2.32|502823|32|LR134343|CRISPRCasFinder,CRT,PILER-CR 502823-502854 32 KT224359 Bacillus phage TsarBomba, complete genome 75344-75375 10 0.688
LR134343_2 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501262-501293 32 MK061416 Rothia phage Spartoi, complete genome 18141-18172 11 0.656
LR134343_2 2.14|501741|32|LR134343|PILER-CR,CRISPRCasFinder,CRT 501741-501772 32 AP013364 Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S37-C18 1021-1052 11 0.656

1. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to JQ015307 (Pectobacterium phage phiTE, complete genome) position: , mismatch: 5, identity: 0.844 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
gatcacctttgtcacctttagggcc--ttgcggt	Protospacer
 *********.**************  ** **

2. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KY514263 (Pectobacterium phage vB_PatM_CB7, complete genome) position: , mismatch: 5, identity: 0.844 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
gatcacctttgtcacctttagggcc--ttgcggt	Protospacer
 *********.**************  ** **

3. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031279 (Staphylococcus hominis strain 19A plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
tgcataatcaaaatattcaacatcaaaatcgt	Protospacer
  ***** * ********************.

4. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MT774383 (CrAssphage cr11_1, complete genome) position: , mismatch: 6, identity: 0.812 

accataagctaaatattcaacatca---aaatcaa	CRISPR spacer
aacataagctaaattttcaacagcagcgaaat---	Protospacer
* ************ ******* **   ****

5. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
catcacctttatcacctttagggccggccgga	Protospacer
.**************************..  .

6. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to AF151091 (Prophage P-EibA J protein-like protein (J) gene, partial cds; and Lom (lom), ORF-401-like protein (orf-401), ORF-191A (orf-191A), immunoglobulin-binding protein EibA (eibA), ORF-156A (orf-156A), ORF-60A (orf-60A), and EaaA (eaaA) genes, complete cds) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gttcacctttatcccctttcgggccggtttgc	Protospacer
  *********** ***** **********

7. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN855617 (Myoviridae sp. isolate 527, complete genome) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcacctttctcacctttagggccggtggtt	Protospacer
*.******** *****************  .

8. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KC954774 (Cronobacter phage CR8, complete genome) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tatcacctttgtcacctttcgggccaggtgtg	Protospacer
**********.******** *****.* * .*

9. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN395285 (Klebsiella phage PhiKpNIH-10, complete genome) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
gatcgcctttgtcacctttagggcc--ttgcggg	Protospacer
 ***.*****.**************  ** **

10. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN395285 (Klebsiella phage PhiKpNIH-10, complete genome) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
tgtcgcctttatcacctttcgggcc--ttgcggg	Protospacer
*.**.************** *****  ** **

11. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 6, identity: 0.812 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
gatcgcctttgtcacctttagggcc--ttgcggg	Protospacer
 ***.*****.**************  ** **

12. spacer 1.1|434399|28|LR134343|CRISPRCasFinder matches to NZ_CP046571 (Xanthomonas albilineans strain Xa-FJ1 plasmid pXaFJ1, complete sequence) position: , mismatch: 7, identity: 0.75 

caaaggtgcagccaaagatagcgacatc	CRISPR spacer
gaaagctgcagccaaagacagcgaggcg	Protospacer
 **** ************.***** ..

13. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
catcacctttatcacctttagggccagcagga	Protospacer
.************************.*.   .

14. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_017974 (Cronobacter phage CR3, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tatcacctttgtcacctttcgggccgggagta	Protospacer
**********.******** *******   ..

15. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF042360 (Pseudomonas phage Phabio, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gatcccctttatcacctttaggaccggtgata	Protospacer
 *** *****************.*****  ..

16. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_019718 (Enterobacteria phage vB_EcoS_Rogue1, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
catcacctttatcaccttttggtccggatgga	Protospacer
.****************** ** **** *  .

17. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KR296684 (UNVERIFIED: Salmonella phage 19, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
ggtcacctttatcacctttaggccc--ctgcggc	Protospacer
 .******************** **  .* **

18. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF417874 (Uncultured Caudovirales phage clone 3S_14, partial genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tatcacctttgtctcctttagggccttgtgct	Protospacer
**********.** ***********   * *

19. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_029072 (Salmonella phage 19, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
ggtcacctttatcacctttaggccc--ctgcggc	Protospacer
 .******************** **  .* **

20. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KR296695 (UNVERIFIED: Salmonella phage 41, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggc----cggtttcg	CRISPR spacer
ggtcacctttatcacctttaggcccctgcggt----	Protospacer
 .******************** *    ****

21. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggcc----ggtttcg	CRISPR spacer
gatcacccttatcacctttaggtccttgtggt----	Protospacer
 ******.************** **    ***

22. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MK448874 (Streptococcus phage Javan206, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcacctttatcacctttagcaccgtcagcg	Protospacer
*.******************* .*** .  **

23. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_022968 (Enterobacteria phage 4MG, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg--	CRISPR spacer
gatcacctttgtcacctttaggtcc--ttgtggc	Protospacer
 *********.*********** **  ** .*

24. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_011282 (Klebsiella variicola strain 342 plasmid pKP187, complete sequence) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tagcgtctttatcgcctttagggctggttagg	Protospacer
** *..*******.**********.****  *

25. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MH533020 (Acinetobacter phage ABPH49, complete genome) position: , mismatch: 7, identity: 0.781 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcacctttatcaccttttggtcccggtgtg	Protospacer
*.***************** ** ** * * .*

26. spacer 2.7|501322|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013927 (Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence) position: , mismatch: 7, identity: 0.781 

tacctttggctatgttcgcactacagaagtaa	CRISPR spacer
tacctttggctttgttctcactagcaaggtag	Protospacer
*********** ***** *****  .*.***.

27. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017382 (Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
agatttagatttaaccttaaaagccggtattg	Protospacer
*************** *********.  *  .

28. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024188 (Moraxella osloensis strain TT16 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
agatttagatttaaccttaaaagccggtattg	Protospacer
*************** *********.  *  .

29. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024179 (Moraxella osloensis strain YHS plasmid pYHS3, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
agatttagatttaaccttaaaagccggtattg	Protospacer
*************** *********.  *  .

30. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM406490 (Salmonella enterica subsp. enterica serovar Typhimurium strain 202 plasmid pSEM, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
atatttagatttagcactaaaagccaattgat	Protospacer
* ***********.**.*********   **

31. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP294351 (Escherichia coli strain CZD1527 plasmid pIGT15, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
atatttagatttagcactaaaagccaattgat	Protospacer
* ***********.**.*********   **

32. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU315015 (Serratia marcescens strain NCTC 50331 plasmid R1215, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
atatttagatttagcactaaaagccaattgat	Protospacer
* ***********.**.*********   **

33. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NC_024997 (Klebsiella oxytoca plasmid pACM1, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
atatttagatttagcactaaaagccaattgat	Protospacer
* ***********.**.*********   **

34. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to KP294350 (Uncultured bacterium plasmid pARM26, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
atatttagatttagcactaaaagccaattgat	Protospacer
* ***********.**.*********   **

35. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985264 (Escherichia coli strain 717 plasmid RCS51TR717_p, complete sequence) position: , mismatch: 7, identity: 0.781 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
atatttagatttagcactaaaagccaattgat	Protospacer
* ***********.**.*********   **

36. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017904 (Vibrio alginolyticus strain K05K4 plasmid pL289, complete sequence) position: , mismatch: 7, identity: 0.781 

--agatttagatttaacattaaaagccatgagaa	CRISPR spacer
gccgattc--atttaacactaagagccatgagat	Protospacer
   ****.  ********.***.**********

37. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017901 (Vibrio alginolyticus strain K04M5 plasmid pL294, complete sequence) position: , mismatch: 7, identity: 0.781 

--agatttagatttaacattaaaagccatgagaa	CRISPR spacer
gccgattc--atttaacactaagagccatgagat	Protospacer
   ****.  ********.***.**********

38. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017909 (Vibrio alginolyticus strain K06K5 plasmid pL291, complete sequence) position: , mismatch: 7, identity: 0.781 

--agatttagatttaacattaaaagccatgagaa	CRISPR spacer
gccgattc--atttaacactaagagccatgagat	Protospacer
   ****.  ********.***.**********

39. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017893 (Vibrio alginolyticus strain K04M1 plasmid pL280, complete sequence) position: , mismatch: 7, identity: 0.781 

--agatttagatttaacattaaaagccatgagaa	CRISPR spacer
gccgattc--atttaacactaagagccatgagat	Protospacer
   ****.  ********.***.**********

40. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017898 (Vibrio alginolyticus isolate K04M3 plasmid pL294, complete sequence) position: , mismatch: 7, identity: 0.781 

--agatttagatttaacattaaaagccatgagaa	CRISPR spacer
gccgattc--atttaacactaagagccatgagat	Protospacer
   ****.  ********.***.**********

41. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_042038 (Enterobacteriophage phiKP26, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
catcacctttatcaccttttgggccagccgga	Protospacer
.****************** *****.*..  .

42. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KT825490 (Escherichia phage C119, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
catcacctttatcaccttttgggccagccgga	Protospacer
.****************** *****.*..  .

43. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_019718 (Enterobacteria phage vB_EcoS_Rogue1, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
cgtcacctttatcgcctttagggccaattgga	Protospacer
..***********.***********..**  .

44. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_007291 (Enterobacteria phage JK06, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
cgtcacctttatcgcctttagggccaattgga	Protospacer
..***********.***********..**  .

45. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to DQ121662 (Escherichia virus Jk06, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
cgtcacctttatcgcctttagggccaattgga	Protospacer
..***********.***********..**  .

46. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MH576968 (Streptomyces phage Wofford, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tatcacccttttcacctttagggccaggaata	Protospacer
*******.** **************.*   ..

47. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN395285 (Klebsiella phage PhiKpNIH-10, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcgcctttatcacctttcgggcctttcagg	Protospacer
*.**.************** *****  *.  *

48. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN334766 (Serratia phage PCH45, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gatcacctttatcgcctttaggtccacgtgca	Protospacer
 ************.******** **.  * *.

49. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MH892353 (Streptococcus phage SW2, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gctcacctctatcacctttaggtcctttctca	Protospacer
  ******.************* **  *.**.

50. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KY705288 (Streptococcus phage P9901, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gctcacctctatcacctttaggtcctttctca	Protospacer
  ******.************* **  *.**.

51. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MG552615 (Klebsiella virus GML-KpCol1, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcgcctttatcacctttcgggcctttcagg	Protospacer
*.**.************** *****  *.  *

52. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to KT717083 (Streptococcus phage 73, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gctcacctctatcacctttaggtcctttctca	Protospacer
  ******.************* **  *.**.

53. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MH973661 (Streptococcus phage SW5, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gctcacctctatcacctttaggtcctttctca	Protospacer
  ******.************* **  *.**.

54. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to GU070616 (Salmonella phage PVP-SE1, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggc----cggtttcg	CRISPR spacer
ggtcacctttatcgcctttaggcccctgcggt----	Protospacer
 .***********.******** *    ****

55. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to JX181824 (Salmonella phage SSE-121, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggc----cggtttcg	CRISPR spacer
ggtcacctttatcgcctttaggcccctgcggt----	Protospacer
 .***********.******** *    ****

56. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_003390 (Synechococcus phage P60, complete genome) position: , mismatch: 8, identity: 0.75 

tatcacctttatcacctttagggccggtttcg----	CRISPR spacer
tgtcacctttatcaccttttggacc----ttgagga	Protospacer
*.***************** **.**    *.*

57. spacer 2.11|501562|31|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF805809 (Escherichia phage vB_EcoM_PHB05, complete genome) position: , mismatch: 8, identity: 0.742 

----taatagcccagtggttagccacaacgctaca	CRISPR spacer
gctgta----cccagtggtaagccacaacggtaag	Protospacer
    **    ********* ********** ** .

58. spacer 2.13|501681|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033099 (Staphylococcus warneri strain SWO plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

tccaattagttttactgttacttagttgccat	CRISPR spacer
tgacattagtattactgttatttagttataat	Protospacer
*   ****** *********.******.. **

59. spacer 2.13|501681|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033099 (Staphylococcus warneri strain SWO plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

tccaattagttttactgttacttagttgccat	CRISPR spacer
tgacattagtattactgttatttagttataat	Protospacer
*   ****** *********.******.. **

60. spacer 2.22|502222|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NC_004688 (Mycobacterium phage Omega, complete genome) position: , mismatch: 8, identity: 0.75 

gtgcaccgatacaccagtttttatacgtttcc	CRISPR spacer
cagcaccgatccaccagttcttatacataagc	Protospacer
  ******** ********.******.*   *

61. spacer 2.22|502222|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to AY129338 (Mycobacterium virus Omega, complete genome) position: , mismatch: 8, identity: 0.75 

gtgcaccgatacaccagtttttatacgtttcc	CRISPR spacer
cagcaccgatccaccagttcttatacataagc	Protospacer
  ******** ********.******.*   *

62. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014235 (Moraxella osloensis strain CCUG 350 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
tgatttagatttaaccttaaaagccggtattg	Protospacer
 ************** *********.  *  .

63. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to KM262192 (Leuconostoc phage Ln-9, complete genome) position: , mismatch: 8, identity: 0.75 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
tgattttgatttaacattaaaaacctatccaa	Protospacer
 ***** ***************.**     **

64. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 8, identity: 0.75 

agatttagatttaacattaaaagccatgagaa	CRISPR spacer
agatttagatttaacaattaaagaatttttaa	Protospacer
**************** * ****   *   **

65. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019364 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpB34, complete sequence) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
tagtcaaaataaatattaaacatcaaaataaa	Protospacer
    .**. ******** *********** **

66. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038185 (Staphylococcus aureus strain MJ015 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
atcataagctaaatattcatcttcatcgatat	Protospacer
*.***************** * ***  . .*

67. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015635 (Borrelia turicatae strain BTE5EL plasmid lp44) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
tagtcaaaataaatattaaacatcaaaataaa	Protospacer
    .**. ******** *********** **

68. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to AP013409 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C105A-MedDCM-OCT-S28-C49) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
attaggtcttaaatattctccatcaaaatcaa	Protospacer
*..* .  .*********  ************

69. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN694105 (Marine virus AFVG_250M210, complete genome) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
ttcataagctaaattttcaaaatcatctaaaa	Protospacer
 .************ ***** ****     **

70. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MG945554 (UNVERIFIED: Microviridae sp. isolate 3163-1602, complete genome) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
ttggttaactaaatagtcaacatcacaatcat	Protospacer
 . .* *.******* ********* *****

71. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN694723 (Marine virus AFVG_250M211, complete genome) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
ttcataagctaaattttcaaaatcatctaaaa	Protospacer
 .************ ***** ****     **

72. spacer 2.5|501202|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MN694661 (Marine virus AFVG_250M209, complete genome) position: , mismatch: 9, identity: 0.719 

accataagctaaatattcaacatcaaaatcaa	CRISPR spacer
ttcataagctaaattttcaaaatcatctaaaa	Protospacer
 .************ ***** ****     **

73. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to LC487410 (Vibrio phage KIT04 DNA, complete genome) position: , mismatch: 9, identity: 0.719 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gatcccccttatcacctttagggcctctacta	Protospacer
 *** **.*****************  * ...

74. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 9, identity: 0.719 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcgcctttatcacctttcgggccttt----	Protospacer
*.**.************** *****  *

75. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MK448834 (Streptococcus phage Javan91, complete genome) position: , mismatch: 9, identity: 0.719 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
ggtcacctttatcacctttatcgccttttatc	Protospacer
 .******************  ***  ** .

76. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 9, identity: 0.719 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
cttcacctttgtcaccttttgggccaattata	Protospacer
. ********.******** *****..** ..

77. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to JN882284 (Cronobacter phage vB_CsaM_GAP31, complete genome) position: , mismatch: 9, identity: 0.719 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcacccttatcacctttaggtccttgtgga	Protospacer
*.*****.************** **   *  .

78. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MK449009 (Streptococcus phage Javan88, complete genome) position: , mismatch: 9, identity: 0.719 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
ggtcacctttatcacctttatcgccttttatc	Protospacer
 .******************  ***  ** .

79. spacer 2.10|501502|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_013164 (Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence) position: , mismatch: 9, identity: 0.719 

tttgtcagagcttagcttttgctatccttaag	CRISPR spacer
cgcttttgagcttatcttttgctatacttaat	Protospacer
. . *. ******* ********** *****

80. spacer 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU356480 (Vibrio parahaemolyticus strain VPS92 plasmid pVPS92-VEB, complete sequence) position: , mismatch: 9, identity: 0.719 

tgaagtctacagggagatgttgatcgtcatct------	CRISPR spacer
cgaagtctacagggagattt------ttatctgttgag	Protospacer
.***************** *      *.****

81. spacer 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053812 (Vibrio cholerae strain W6G plasmid pW6G, complete sequence) position: , mismatch: 9, identity: 0.719 

tgaagtctacagggagatgttgatcgtcatct------	CRISPR spacer
cgaagtctacagggagattt------ttatctgttgag	Protospacer
.***************** *      *.****

82. spacer 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053815 (Vibrio cholerae strain W7G plasmid pW7G, complete sequence) position: , mismatch: 9, identity: 0.719 

tgaagtctacagggagatgttgatcgtcatct------	CRISPR spacer
cgaagtctacagggagattt------ttatctgttgag	Protospacer
.***************** *      *.****

83. spacer 2.16|501861|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN831184 (Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence) position: , mismatch: 9, identity: 0.719 

tgaagtctacagggagatgttgatcgtcatct------	CRISPR spacer
cgaagtctacagggagattt------ttatctgttgag	Protospacer
.***************** *      *.****

84. spacer 2.20|502102|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to AP014367 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C79, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719 

tccaaagttggatacttgccatcata-atcgcg	CRISPR spacer
aaaaaagttggatacttgccaggatatactac-	Protospacer
   ******************  *** *...*

85. spacer 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009640 (Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence) position: , mismatch: 9, identity: 0.719 

gtttcttttgattttttccacgctttctgggt	CRISPR spacer
atttcttttgcttttttccatgctagtttttt	Protospacer
.********* *********.***  .*   *

86. spacer 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053961 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gtttcttttgattttttccacgctttctgggt	CRISPR spacer
atttcttttgcttttttccatgctagtttttt	Protospacer
.********* *********.***  .*   *

87. spacer 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to KX119177 (Helicobacter phage SwA626G, complete genome) position: , mismatch: 9, identity: 0.719 

gtttcttttgattttttccacgctttctgggt	CRISPR spacer
gctcgttgtgattttttccatgctttctcatc	Protospacer
*.*. ** ************.******* . .

88. spacer 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to KX119204 (Helicobacter phage Sw577G, complete genome) position: , mismatch: 9, identity: 0.719 

gtttcttttgattttttccacgctttctgggt	CRISPR spacer
gctcgttgtgattttttccatgctttctcatc	Protospacer
*.*. ** ************.******* . .

89. spacer 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050068 (Klebsiella aerogenes strain 035 plasmid p35, complete sequence) position: , mismatch: 9, identity: 0.719 

gtaagtcctgtgtggtgttcagaatacccatt	CRISPR spacer
agactgcctgtgtggagttcagaatacgcagc	Protospacer
. *   ********* *********** ** .

90. spacer 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029448 (Serratia marcescens strain CAV1761 plasmid pCAV1761-205, complete sequence) position: , mismatch: 9, identity: 0.719 

gtaagtcctgtgtggtgttcagaatacccatt	CRISPR spacer
agactgcctgtgtggagttcagaatacgcagc	Protospacer
. *   ********* *********** ** .

91. spacer 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to MN310380 (Raoultella ornithinolytica strain 170602815 plasmid p602815-NR, complete sequence) position: , mismatch: 9, identity: 0.719 

gtaagtcctgtgtggtgttcagaatacccatt	CRISPR spacer
agactgcctgtgtggagttcagaatacgcagc	Protospacer
. *   ********* *********** ** .

92. spacer 2.26|502462|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011641 (Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence) position: , mismatch: 9, identity: 0.719 

gtaagtcctgtgtggtgttcagaatacccatt	CRISPR spacer
agactgcctgtgtggagttcagaatacgcagc	Protospacer
. *   ********* *********** ** .

93. spacer 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013193 (Escherichia coli strain FORC_031 plasmid pFORC31.3, complete sequence) position: , mismatch: 9, identity: 0.719 

----ttatgttttatcacccaagagcggtattctct	CRISPR spacer
agcatca----ttatcacccaagagcagtcttctta	Protospacer
    *.*    ***************.** ****.

94. spacer 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NC_009788 (Escherichia coli O139:H28 str. E24377A plasmid pETEC_73, complete sequence) position: , mismatch: 9, identity: 0.719 

----ttatgttttatcacccaagagcggtattctct	CRISPR spacer
agcatca----ttatcacccaagagcagtcttctta	Protospacer
    *.*    ***************.** ****.

95. spacer 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NC_014234 (Escherichia coli ETEC 1392/75 plasmid p746, complete sequence) position: , mismatch: 9, identity: 0.719 

----ttatgttttatcacccaagagcggtattctct	CRISPR spacer
agcatca----ttatcacccaagagcagtcttctta	Protospacer
    *.*    ***************.** ****.

96. spacer 2.28|502582|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NC_007635 (Escherichia coli plasmid pCoo, complete sequence) position: , mismatch: 9, identity: 0.719 

----ttatgttttatcacccaagagcggtattctct	CRISPR spacer
agcatca----ttatcacccaagagcagtcttctta	Protospacer
    *.*    ***************.** ****.

97. spacer 2.30|502703|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to MN693472 (Marine virus AFVG_25M86, complete genome) position: , mismatch: 9, identity: 0.719 

agatttagatttaacattaaaag----ccatgagaa	CRISPR spacer
agatttagatttaatagtaaaagattattttg----	Protospacer
**************.* ******    .. **

98. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MT066160 (Vibrio phage Saratov-12, complete genome) position: , mismatch: 10, identity: 0.688 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
agtcacccttatcacctttcgggccaactggt	Protospacer
 .*****.*********** *****...*

99. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_025416 (Staphylococcus phage MCE-2014, complete genome) position: , mismatch: 10, identity: 0.688 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
gttcacctttatcacccttaggtccttgtgga	Protospacer
  **************.***** **   *  .

100. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NC_023610 (Erwinia phage PhiEaH1, complete genome) position: , mismatch: 10, identity: 0.688 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
tgtcacctttatcacctttcaggccctggata	Protospacer
*.***************** .****     ..

101. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MT767883 (Vibrio phage Saratov-15, complete genome) position: , mismatch: 10, identity: 0.688 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
agtcacccttatcacctttcgggccaactggt	Protospacer
 .*****.*********** *****...*

102. spacer 2.12|501621|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019842 (Leptotrichia wadei strain JMUB3936 plasmid pJMUB3934p1, complete sequence) position: , mismatch: 10, identity: 0.688 

acacatttctacgtcttcatataagcgggcta	CRISPR spacer
tcatatttctacgttttcatataaaacctcct	Protospacer
 **.**********.*********.    *.

103. spacer 2.23|502282|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.688 

gtttcttttgattttttccacgctttctgggt	CRISPR spacer
cgggatattgatgttttccacgctttcaggac	Protospacer
     * ***** ************** **..

104. spacer 2.32|502823|32|LR134343|CRISPRCasFinder,CRT,PILER-CR matches to KT224359 (Bacillus phage TsarBomba, complete genome) position: , mismatch: 10, identity: 0.688 

tttagtccagcttcgatgtacgtttgcttggt	CRISPR spacer
aaaatgaaagcttcgatgtacgtatgctaggg	Protospacer
   *    *************** **** **

105. spacer 2.6|501262|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to MK061416 (Rothia phage Spartoi, complete genome) position: , mismatch: 11, identity: 0.656 

tatcacctttatcacctttagggccggtttcg	CRISPR spacer
ggataccctgatcacctttagggccgggcgta	Protospacer
 . .***.* ***************** . ..

106. spacer 2.14|501741|32|LR134343|PILER-CR,CRISPRCasFinder,CRT matches to AP013364 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G11, isolate: uvMED-CGR-C52A-MedDCM-OCT-S37-C18) position: , mismatch: 11, identity: 0.656 

tagaggtaaagcaccaagccgagtaatgttta	CRISPR spacer
tagaggtaaagcaacaagcagagctggacaag	Protospacer
************* ***** ***. . ..  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage