CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134386	Chryseobacterium nakagawai strain NCTC13529 genome assembly, chromosome: 1	3 crisprs	DEDDh,cas3,PD-DExK,csa3,RT,WYL,cas2,cas1,cas9	0	12	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134386_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134386_1

3442734-3444089

TypeII

Consensus_repeat	Method
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	CRISPRCasFinder
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	PILER-CR

17 spacers

cas2,cas1,cas9

The CRISPR arrays of LR134386_1

>merge|LR134386|1|3442734-3444089|CRISPRCasFinder,PILER-CR
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACATGAATGTTTTAAGTCCCAACGTCTTTTATGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTGCTGAAGTCGTAGGTGAGTGGCAAGACATGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTATGGAAAACGTTATCGACGCAGCTCAAAGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTTTAAGACGAATTATAAAAACTAATTTATAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACAGGCTAAAAGAAAAGAGGCTCTTAAGTGTAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTGGTCAATCTGCTGAAAATGCACAGGGTCTGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTTCATTTGAAAAATCCTATCTGTTTTAATGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTGATCGTCAAATTTCAAACAAGTTTACAGAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTGTATTGTTTTTTAGTGGTTAATCAATCCGGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACCGAGATCAGTCGCTTTATTATGGCGAGTCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACGAATATTATTCGATCCGGCAATCCAATAATGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACGAAAATAGTATTTGCAACCGTAGAAAGTATGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACATGCAGATGTGAATTTGTACAGCATGTACCGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTAATATTGGGGTTTTTCTTCAATTGAAGGAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACATAGTACATTTTCGCAAGAACATATTATCAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACTGAACAGATAATTACCAATATTTCCCTTGAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAACAAAAATAAAATATACTGTAAGCCTTACAAAGTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC

>LR134386|1|1|3442734-3444089|CRISPRCasFinder
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	ATGAATGTTTTAAGTCCCAACGTCTTTTAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGCTGAAGTCGTAGGTGAGTGGCAAGACAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TATGGAAAACGTTATCGACGCAGCTCAAAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TTTAAGACGAATTATAAAAACTAATTTATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	AGGCTAAAAGAAAAGAGGCTCTTAAGTGTA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGGTCAATCTGCTGAAAATGCACAGGGTCT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TTCATTTGAAAAATCCTATCTGTTTTAATG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGATCGTCAAATTTCAAACAAGTTTACAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGTATTGTTTTTTAGTGGTTAATCAATCCG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	CGAGATCAGTCGCTTTATTATGGCGAGTCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	GAATATTATTCGATCCGGCAATCCAATAAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	GAAAATAGTATTTGCAACCGTAGAAAGTAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	ATGCAGATGTGAATTTGTACAGCATGTACC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TAATATTGGGGTTTTTCTTCAATTGAAGGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	ATAGTACATTTTCGCAAGAACATATTATCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGAACAGATAATTACCAATATTTCCCTTGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	AAAAATAAAATATACTGTAAGCCTTACAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC

>LR134386|1|1|3442811-3444089|PILER-CR
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGCTGAAGTCGTAGGTGAGTGGCAAGACAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TATGGAAAACGTTATCGACGCAGCTCAAAG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TTTAAGACGAATTATAAAAACTAATTTATA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	AGGCTAAAAGAAAAGAGGCTCTTAAGTGTA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGGTCAATCTGCTGAAAATGCACAGGGTCT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TTCATTTGAAAAATCCTATCTGTTTTAATG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGATCGTCAAATTTCAAACAAGTTTACAGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGTATTGTTTTTTAGTGGTTAATCAATCCG
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	CGAGATCAGTCGCTTTATTATGGCGAGTCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	GAATATTATTCGATCCGGCAATCCAATAAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	GAAAATAGTATTTGCAACCGTAGAAAGTAT
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	ATGCAGATGTGAATTTGTACAGCATGTACC
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TAATATTGGGGTTTTTCTTCAATTGAAGGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	ATAGTACATTTTCGCAAGAACATATTATCA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	TGAACAGATAATTACCAATATTTCCCTTGA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC	AAAAATAAAATATACTGTAAGCCTTACAAA
GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134386.1\|VEH21149.1\|3452295_3452928_+\|5'-nucleotidase	unknown	unknown	gnl\|CDD\|223620
LR134386.1\|VEH21142.1\|3441928_3442090_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21135.1\|3435374_3437180_-\|Tyrosine-phosphorylated-protein-A	unknown	unknown	gnl\|CDD\|273597
LR134386.1\|VEH21143.1\|3442407_3442548_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21146.1\|3445390_3449002_-\|Uncharacterized-protein-conserved-in-bacteria	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187774
LR134386.1\|VEH21134.1\|3433620_3435234_-\|Uncharacterized-protein-conserved-in-bacteria	unknown	unknown	gnl\|CDD\|224563
LR134386.1\|VEH21139.1\|3439733_3440090_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21153.1\|3457351_3457855_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|379472
LR134386.1\|VEH21136.1\|3437315_3437522_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21150.1\|3452967_3453534_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21148.1\|3450019_3452143_+\|general-stress-protein-13	unknown	unknown	gnl\|CDD\|225094
LR134386.1\|VEH21145.1\|3444481_3445375_-\|CRISPR-associated-endonuclease-Cas1,-subtype-II/NMENI	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
LR134386.1\|VEH21137.1\|3437734_3439306_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21152.1\|3454696_3457330_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|366659
LR134386.1\|VEH21141.1\|3440948_3441623_-\|Uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|377274
LR134386.1\|VEH21140.1\|3440157_3440814_-\|hydroperoxidase-II	unknown	unknown	gnl\|CDD\|153228
LR134386.1\|VEH21151.1\|3453836_3454694_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH21138.1\|3439340_3439646_-\|Protein-of-uncharacterised-function-(DUF1294)	unknown	unknown	gnl\|CDD\|377743
LR134386.1\|VEH21147.1\|3449264_3449930_+\|Putative-O-methyltransferase-MSMEG_5073	unknown	unknown	gnl\|CDD\|226607
LR134386.1\|VEH21144.1\|3444146_3444485_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043

Protein	Function_ID	Function_description	E-value
LR134386.1\|VEH21135.1\|3435374_3437180_-\|Tyrosine-phosphorylated-protein-A	gnl\|CDD\|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
LR134386.1\|VEH21144.1\|3444146_3444485_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.44341e-21
LR134386.1\|VEH21146.1\|3445390_3449002_-\|Uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	4.73039e-51
LR134386.1\|VEH21147.1\|3449264_3449930_+\|Putative-O-methyltransferase-MSMEG_5073	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	5.26338e-60
LR134386.1\|VEH21138.1\|3439340_3439646_-\|Protein-of-uncharacterised-function-(DUF1294)	gnl\|CDD\|377743	pfam06961, DUF1294, Protein of unknown function (DUF1294). This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.	1.44797e-19
LR134386.1\|VEH21153.1\|3457351_3457855_-\|Uncharacterised-protein	gnl\|CDD\|379472	pfam14107, DUF4280, Domain of unknown function (DUF4280). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 129 and 456 amino acids in length. There is a single completely conserved residue C that may be functionally important.	2.3394e-23
LR134386.1\|VEH21134.1\|3433620_3435234_-\|Uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.4344e-61
LR134386.1\|VEH21148.1\|3450019_3452143_+\|general-stress-protein-13	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
LR134386.1\|VEH21145.1\|3444481_3445375_-\|CRISPR-associated-endonuclease-Cas1,-subtype-II/NMENI	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.63927e-93
LR134386.1\|VEH21149.1\|3452295_3452928_+\|5'-nucleotidase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	2.52646e-30
LR134386.1\|VEH21152.1\|3454696_3457330_-\|Uncharacterised-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	0.000169321
LR134386.1\|VEH21141.1\|3440948_3441623_-\|Uncharacterized-conserved-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	8.81878e-30
LR134386.1\|VEH21140.1\|3440157_3440814_-\|hydroperoxidase-II	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	2.31797e-84

>LR134386.1|VEH21143.1|3442407_3442548_-|Uncharacterised-protein
MSSMSWEVFHTTKRTISLNSDVIGTRIVNVKASFEEKTLFNTTSLY
>LR134386.1|VEH21142.1|3441928_3442090_+|Uncharacterised-protein
MKQLKKITRENLKAIKGGIDYCPAGYLYTCDDMAICDAELGIPCSCRCIPYVP
>LR134386.1|VEH21141.1|3440948_3441623_-|Uncharacterized-conserved-protein
MKKISVIALVAVGLLAASCNSKEKTDTAVATEQTVAESKGEVLAVDTATSLVNWKAFHKGGMAPRWGTLTVKSGDLSVDGGQVSAGNFVIDMNSIKVDPASVTEKDKKPADLEAHLKNPDFFDVAKNPTSDFKITSVTDLKETPKDAVAGANKTVSGNLTLSGKTMNVTFPAKVDVAEGTAAIQAKFTVNRADWGIKFGTSEADPAEWMISKDIEIAIDVKAKK
>LR134386.1|VEH21140.1|3440157_3440814_-|hydroperoxidase-II
MIYFFTDHLNLILGLDNAWTALFFLSIRDNIQNHNIMSKKIAILATNGFEESELQSPKEYLEQQGWTAHVVSPEGETIRSWAEKDWGKDYHVDKTLNEVTASEYDALVLPGGVINPDQLRTNGQALSFVRDFFIQNKPVAAICHGPQILINAKVVKGRKMTSVKSISKDLINAGAHWEDSEVVVDNGLVTSRTPKDLPAFNAKMVEEFKEGKHVSQGL
>LR134386.1|VEH21139.1|3439733_3440090_+|Uncharacterised-protein
MTVHDLAGTYSIKGSNQEASDQVSYQGTLILSVDENARIIAQWVIGDHIQNGTGFYKDHILVLNFNYEGDDHKIYKGVAVYRCLSQDILDGFWSEKHGNPLYLGSEYCVRIQNSWIFN
>LR134386.1|VEH21138.1|3439340_3439646_-|Protein-of-uncharacterised-function-(DUF1294)
MVFSMYKLNLFLQQINFIMIPFLLITNLITFGVFGFDKLQAKRHQWRISENVLLGLSLIGIIGAAAGMIIFNHKVSKKSFLVKFFIVLLIDVVLLYRLIRH
>LR134386.1|VEH21137.1|3437734_3439306_+|Uncharacterised-protein
MTNNLNLLTIDSFFSSSDPASDLNIVSLIDPFSGEIANFKKQDLPVPDGKYLYRIKKNGNGPVSYYKRIITDDISITIADVRGDGMTDDSVEIQKLIDEMEAGQVLKLDNRRYMLYQPLQINKAIKITGSSTKSTIGLPPFLITNNNHGIIINAYKTVINGKEITTNASGTVLEGFGIYNATLYTTTPNNVTGIKIIGTPEVHAYDIILKNLAINGYQTGLEANYLWSSQIQTVKIGNCQIGMHIKNNSVNNEISNNTSISIDVKVINEETNEEELIDIPGSKGIFFEGSTSQEGWRIIDTFIFNVYQGIYAEKTSHVNVLNSMIDFCRHIGIVIGAESHNWNINSNYIALSHPGYGIYLANSIKNSSFTRGNKIIDNDILIYDNAIPDDTSIGVNIMGKESLYDDVRGNSIKNFKVYDIRADSGLKTTITHNKCLSGISPNIIGNFITNDNLGTVYYQNLNDSLHLGKVKITYADTFPSVSSPDWKRGDIILNTGPSVNMPIGWVNTTDGTNTWKPFGIINN
>LR134386.1|VEH21136.1|3437315_3437522_-|Uncharacterised-protein
MKNVRKITRSEMKTLTGGIAKGMVRCKDPDTCILRWGWPTGSSSNCDEMAIICGDAPAVDPCDSSLCP
>LR134386.1|VEH21135.1|3435374_3437180_-|Tyrosine-phosphorylated-protein-A
MQNIRNIAIIAHVDHGKTTLVDKIIHATNIFRENQESGELIMDNNDLERERGITILSKNISVTYKDTKINVIDTPGHADFGGEVERVLKMADGVILLVDAFEGPMPQTRFVLQKALELGLRPLVVINKVDKPNCRPDEVHDQVFDLFFNLEATEEQLDFPTFYGSSKQGWFNTSLEQTEDILPLLDGILQYVPEPKVTEGNLQMQITSLDFSSFLGRIAIGKVTRGELKESQWIGLAQADGKVVKGKVKELYVFEGLGKKKVTEVKAGDICAVVGFDSFQIGDSFVDLENPEPLERTAIDEPTLNMTFSINNSPFFGKDGKYVTSNHLKERLTKELEKNLALRVQQTDDANTFLVFGRGILHLSVLIETMRREGYEMTIGQPQVILREIDGEKCEPYESLVVDVPEEYASRVIDLATQRKGDLHIMETKGEMQHMEFEIPSRGLIGLRSQMLTATAGEAIMAHRFTEYKPFKGAIPGRNNGVLISKTQGPATEYSIAKLQDRGKFFVDPGEEIYAGMIIGEQNKPGDLVVNIVEAKQLNNMRASGKDKDTGVAPKILFSLEECMEYIQGDEAIEVTPNFIRMRKKLLSEEERKRVERSAKS
>LR134386.1|VEH21134.1|3433620_3435234_-|Uncharacterized-protein-conserved-in-bacteria
MKMSKLKLIVLMGVLASYSTSCSTQNNVTKTPPVKNTTKPNTNNTTNQPKPPVAVKPTPGTSTEETFRTNLPEINREFRGAWIASVANINWPSKNNLTVEQQKAEAISMLDMLKDNNFNAAIFQIRPSADALYTSNIEPWSYFLTGETGAAPYPNYDPLLFWIEEAHKRGLELHVWLNPYRAHHTNGGTVNKMSMANRMSDIVVRLKNGMYWFDPANPKTQDHVSNVVKDIVKRYDIDAIHFDDYFYPYATYNKGADFPDYASWNVYQSNGGTLSRADWRRDNVNKFVERIYKEIHAEKNNVRFGISPFGIWKPGYPAGIVGSSQFDELYADAKLWLNKGWVDYFSPQLYWPIDSKGQGFEALLNWWQSENTMKRHLWPGLNTVEIKTYDRPTEIKNQIDISRKILKNDAGEIHWSIAGLTKNPGMLPTLKNGPYSEKALIPKSPWIKTVPLQTPTLFISDNGSFAQTRWSTKNASEVFQWVLFSQYDGVWQTEILPLDTLFKDVPKFKNGKKLNGVAIKAIDRLGNESDYMAKKVK
>LR134386.1|VEH21144.1|3444146_3444485_-|CRISPR-associated-endoribonuclease-Cas2
MNAERFNAYRIMWVLVLYDLPTETKANMKDANRFRKSLLDDGFTLFQFSMYVRHCPSRENAEVHIKRVKFMLPKAGKVAIMCITDKQFGDIEIFFARNKEEPPPTFQQLELF
>LR134386.1|VEH21145.1|3444481_3445375_-|CRISPR-associated-endonuclease-Cas1,-subtype-II/NMENI
MITRSIYIGNPAYLKLKDEQMKILCPETKAEKGSVPVEDLGLLMLDHFQITVSHQLIQKMMGNNVVVISCDSHHLPHGIMLPMYGHTEHSDRVKDQLEASEPLKKQLWKQTVECKIENQKEVLRILGSYYEPMIDYQANVKSGDITNMEGIAAQHYWKYLISLDFLRQRFGDSPNQFFNFGYSVLRSIVARAIVETGLLPVLGIFHKNKYNPYCLADDLMEPYRPFVDILIMHWLAIHSETEELTKEFKAFILQIATKDVKIDDKTRPLLVAIKTTATSLYKCYTGEKRLISYPELI
>LR134386.1|VEH21146.1|3445390_3449002_-|Uncharacterized-protein-conserved-in-bacteria
MKKIIVGVDVGVSSVGIAVMSEENQKKTIENLAVRIVPEDPDFHGKFYSGNTASKNLERTIKRGIRKNNQRYKARRDKLCQTLKNNNMFPANNLFHLSATELYGLRAKAASEQISLQELGRVLILINQRRGFLSNRKSVSEEENSTEYKERIAELEKALENKTIGQKLYSELEESNNTFEVLIRERTYQRSSYIEEFDRIWDEQKKYYQILTGSPNEDNNKGTLYDLIRNRIIYYQRPLKSQKGLIAECLFEKYHKAAVKSSPYFELFRIWQKVNDLSWKTTNGETFKPTPEQKQKLKDALWNGGNLNAKYKLSITEIKKLLGYGKNEKIYLNFTELDGSRTCAILKNALEEAGIENTEQYLLFNLDISDEKGGLFELWHITYSLPTEKEVVNALKNRFGFSENQSKIIAKKVGYPSDYGSLSTRAIRKLLPHLEKGLGYSEACDEVGYDHSGYKTEIGLKPKLKQLKKNELRNPVVEQILNQVVNVINLVIEKYGKIDEIRVELARELRNSAKTRKNISQGNSKNKRNNDVIRKKLIEEYGFRLVNGRDVKRYILWEETTHECLYCNNPINGTDMLTGNADIEHILPKSRSFNNAMTNYIIAHRKCNSNKRQKTAYDFMESKGEEALGQYIEKVNALYNDGKGSISKSKFDNLLCKGEDIPSDFVERMKKDSQYISKEAVKMLKTICPNVYTTTGQVTDFLREEWELKNLLQELTFDKYKAIGQIEEKTIKTNNGQTKTFEVITDWSKRDDHRHHAVDALICALTDQKIIFKLNNLNKIYQYERDALSQKEIEEIEEFLEGKFSLKEFSTQQGNIIECSIPNIRKEVQKHLENILISFKKENSKVLTKNINAPKNIEQKTTWVPRARLHEDTIMGRVKRISEKKIKLNDKILMEEIEMVVNPEIKEMLYQHLAKFDNNLKIAFDQKTLKREPISYKDNEVKEFGVYEWVNTKRVNIESFLTDNQKTKSAKDKFIENVLKSDRGIGILLEKRLKEFNGDYKEAFKNLFENPFITKNGMTVKNVTIYDESKVERVRNGYAKTGGNHHALIYKDENGKYNDKVVSFWVAVEIGLLNISEHNNPYPIINRNDHDELGIFQFSMQINDLFVFDLKHSENPQEENEIDFFDVKNGKLISDKLFRVQKMTKKSSGAFEITYRHHLEANLNRSDKALKGYTWDEHGSNKHLERLTKIRISHLGEIIKIGE
>LR134386.1|VEH21147.1|3449264_3449930_+|Putative-O-methyltransferase-MSMEG_5073
MNQQLFEKVDQYISNLVATEDSVLQETIQSLDDASMPQISISPTQGKFLQLMLLTCKAKRVLELGTLGAYSTIWMTRALPADGRVITVEFDPHHADIASQNIAKAGLSDQIDLRIGKAMDVLNELIATGEEAFDFIFIDADKPPYTEYFELALQLSHPGTIIICDNVIREGQILDENSNDEKVRGVQRFNQMLAGNPKVTATIMQTVGAKEYDGMAIAIVN
>LR134386.1|VEH21148.1|3450019_3452143_+|general-stress-protein-13
MTTVEFIQKQLDISEKSINNTLQLLAEDCTIPFISRYRKDKTGNLDETQIEQIAKISKQFEEMMKRKESILKSIEEQGALTPELRQRIEESFDIQELEDLYLPFKKRKKTKADAAKEKGLGPLAKIIMSQKNNDVQFLASKYLNNEVLSEADALQGARDIMAEWINENMYVRKNLRRLFQRKAVVTSKVVKAKKDEEDAQKFSQYFEWEENLSRIPSHRLLAMLRAETEGFVKTNVGIDKEEAIDFIEKAIIKSNNESSEQIALAIKDSYKRLLEPAISNEALQEAKEKADKKAIEIFSENLSQLLLAPPLGEKRILAIDPGYRSGCKVVCIDEKGDLLHNETLYPHAPQNESGMAMKKIRSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPLQVFVVSEAGASVYSASKIAREEFPTYDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTQLKNELDSTVMKCVNSVGINLNTASKSLLSYVSGIGEKMAENIVNYRAENGAFEDRKQLKKVPRLGEKAFQQAAAFVRITNSKNPLDNSAVHPESYGIVEKMAKDLGIKADELIGNKEKVALIQPENYITGDIGILGIKDILKELEKPGLDPRKAAKVFEFDPHVKSIRDLRAGMILPGIVNNITAFGCFVDLGIKESGLVHISQLKDGFVSDVNEVVKLHQHVRVKVTEVDEARKRVQLSMIL
>LR134386.1|VEH21149.1|3452295_3452928_+|5'-nucleotidase
MNYKNLIFDLDGTLWDSRATIIKIWNDVLSKRQLIQQELKPDDMNQYMGLLAHDILKDMLPGISDLQIEELLSEVVAQENKISRIQGGILYPGVEDTLKSLANTHNLFIVSNCQDGYIESFLEYYQFNTLFVDFESHGRTQKTKSENIHLLMERNGLSIENSIYIGDTQTDYNSAASNELPFIFCDYGFGKLSKPHEAQVSTLSDLKNYI
>LR134386.1|VEH21150.1|3452967_3453534_-|Uncharacterised-protein
MKKIILSIFYFIGTLLISCFGDGSHKQKNIKQKINVDTINTRRADNINNYDNELESNDEIIEDKQFSKWKDEYHYFFQYIDHKGISSDLKAKINLIKSDSCVFESWFEDPNDEQYNKNGYLKLLGHIYVSDDKNLKIIFLENTVLNGESPELDPVFTLINKKNEFYIESFLTSPPHNGIIEMPIQKIK
>LR134386.1|VEH21151.1|3453836_3454694_-|Uncharacterised-protein
MKNLVLFLCIIVVSLLNVSCKKGEALLISSKNKNNEAYNIQVNEQNNNALLNFVKSTSFDFKGYSLGKVGAYIDNIANNFALIKIYIENSGGTGTLGWIKVDFLSDKAYDITINPENPKGLTFNKEKYLAFKNEILDNEPANKAINDTIKAHKLPIEWSSENNLLSVKLSDTFFNIEMDNPNNDHFITYLSKTKSFIPIILSNCYESGYCEEYLITIKDNKEYSKLKIYYNTAPDGNLKNYETRVYKINEDFVIELKTEKYINDELISEKKEKYKINPEGKIILH
>LR134386.1|VEH21152.1|3454696_3457330_-|Uncharacterised-protein
MAKLTITGNTQPIVGNTEAYSLSVFDNLMSSNSFSFPPLKVQWNIHVKDQKGWRITHGNVKDGEQITYKFTHKSLKYKALKIEVTRGKDKGELYIQPQPAEEPKILRVDLLDINSQRLQKGKLLYYTDTLIAKAHCVGMFGHKVSFTLWEDDAIGEGHDPVINMMNRINPVPLVGEVDHEGIAKVIFRLPSYTMAVQIANAQVARGDQNEGKTHEYYVTAEMASKHILKASPNVNVANPTHVPEPPKKQKPKETLLAHRKPPVAPEKKDTKPAKPKPKENTPKFPQTPAAWKQADPEGKIISVEFTDATGKPLKNAKTGDVVSIKISTRNMSGKNVKVRIWEEDFSRYSNDLVYEVSAKLAYNTTNFINGVVLTKDMYTKSYEWGEGNEREYFIEVEHLNTSVTSQVIPVSPDAEPVKVEANDSPSIIKGAKLETKNCGGKYCIDKNSPPSELIREINIRLAGFGGNVPTDKFTDRTEKMIKQFQRDYMKVPETGKVCGSVLKAIDEFSNKYSIPFKRIKCKCGKCSGFGNGKYFEQAQKNNISEKYRKYEYPGIHRSIYWATKAIMHYFATLESALGYKIGDISSGYRCQEDNVINKRGTTNHMGKALDLHVYKTNDNKRANGKDRGAKEGRSLFSKYSNARINWTTKNEFSLEPANIAPTWIHVDVREFELIYLKDQFFVSSAQTAEGGNIISIAMKFSNNMCSCGGDFSSDHKEQKIEHIDKEFGIEDAREALKYINDNFGRERAVVIEKMYRLETSHFTSLQYKETGTPGMEAHGEAPYYGWNSKYWEKNPEYIPMGLTGIKEGIGIGYNKQDTKNNKQFIVFPSVKAGMLYLNAYIDRYNGNYARWYSTSEEGQKKYIESLKGIKPHIVNNF
>LR134386.1|VEH21153.1|3457351_3457855_-|Uncharacterised-protein
MSENLSTHNGKHFVIQKGKASCNQGDVFPQFKVNSHQKHYWNQQDVTADYLAVTEEDIHFNPAGPSFGKCRLKPTSGGYLPCAYVPAGKWQKTYEKVNIMGKSCLSEISELMCSTGGMITVKEHGQTSTMNRQGITLADPQSYHLINPFMDLKESQAELEEPDPIYE

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Crispr_ID: LR134386_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134386_3

4516524-4516677

Orphan

Consensus_repeat	Method
AGCTTCCAGCCTATTTCTTTTCCAAAATCTGTCAATAAATTGTAATCAAAAAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134386_3

>merge|LR134386|3|4516524-4516677|CRISPRCasFinder
AGCTTCCAGCCTATTTCTTTTCCAAAATCTGTCAATAAATTGTAATCAAAAAACTGTAATTTATCAATAACCTGACAGTACCTCCTGCATCCCTCTTCCAGCTTCCAGCCTATTTCTTTTCCAAAATCTGTCAATAAATTGCAATCAAAAAACT

>LR134386|3|3|4516524-4516677|CRISPRCasFinder
AGCTTCCAGCCTATTTCTTTTCCAAAATCTGTCAATAAATTGTAATCAAAAAACT	GTAATTTATCAATAACCTGACAGTACCTCCTGCATCCCTCTTCC
AGCTTCCAGCCTATTTCTTTTCCAAAATCTGTCAATAAATTGCAATCAAAAAACT

Protein	Signature genes	Signature genes Name	Protein_function
LR134386.1\|VEH22115.1\|4513307_4514018_+\|Barstar-(barnase-inhibitor)	unknown	unknown	gnl\|CDD\|240166
LR134386.1\|VEH22126.1\|4526555_4528415_+\|Cocaine-esterase	unknown	unknown	gnl\|CDD\|225487
LR134386.1\|VEH22118.1\|4515936_4516392_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22120.1\|4519365_4520178_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22121.1\|4520272_4520995_-\|Phytanoyl-CoA-dioxygenase-(PhyH)	unknown	unknown	gnl\|CDD\|368580
LR134386.1\|VEH22116.1\|4514381_4514630_-\|Fe/S-biogenesis-protein-NfuA	unknown	unknown	gnl\|CDD\|376458
LR134386.1\|VEH22111.1\|4508613_4509267_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|187560
LR134386.1\|VEH22128.1\|4529458_4530301_-\|Regulatory-protein-of-adaptative-response	unknown	unknown	gnl\|CDD\|185333
LR134386.1\|VEH22109.1\|4506973_4507066_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22127.1\|4528616_4529228_-\|alkylated-DNA-repair-protein-AlkB	unknown	unknown	gnl\|CDD\|372627
LR134386.1\|VEH22110.1\|4507295_4508180_+\|Guanosine-5'-triphosphate,3'-diphosphate-pyrophosphatase	unknown	unknown	gnl\|CDD\|274735
LR134386.1\|VEH22124.1\|4522963_4523383_+\|Uncharacterized-protein-with-a-bacterial-SH3-domain-homologue	unknown	unknown	gnl\|CDD\|377965
LR134386.1\|VEH22117.1\|4514679_4515786_-\|Cell-division-inhibitor-MinD	unknown	unknown	gnl\|CDD\|378455
LR134386.1\|VEH22123.1\|4522470_4522953_+\|Predicted-periplasmic-or-secreted-lipoprotein	unknown	unknown	gnl\|CDD\|225379
LR134386.1\|VEH22119.1\|4516725_4519068_-\|Outer-membrane-receptor-for-ferrienterochelin-and-colicins	unknown	unknown	gnl\|CDD\|379720
LR134386.1\|VEH22112.1\|4509263_4509413_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22113.1\|4509542_4512581_+\|Por-secretion-system-C-terminal-sorting-domain	unknown	unknown	gnl\|CDD\|379073
LR134386.1\|VEH22125.1\|4523459_4526165_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|379720
LR134386.1\|VEH22114.1\|4512898_4513288_+\|Protein-of-uncharacterised-function-(DUF3060)	unknown	unknown	gnl\|CDD\|371435
LR134386.1\|VEH22122.1\|4520998_4522249_-\|Glutamate-aspartate-carrier-protein	unknown	unknown	gnl\|CDD\|234968

Protein	Function_ID	Function_description	E-value
LR134386.1\|VEH22115.1\|4513307_4514018_+\|Barstar-(barnase-inhibitor)	gnl\|CDD\|240166	cd05143, Barstar_SaI14_like, Barstar_SaI14_like contains sequences that are similar to SaI14, an RNAase inhibitor, which are members of the Barstar family. Barstar is an intracellular inhibitor of barnase, an extracellular ribonuclease of Bacillus amyloliquefaciens. Barstar binds tightly to the barnase active site and sterically blocks it thus inhibiting its potentially lethal RNase activity inside the cell. The sequences in this subfamily are mostly uncharacterized, but believed to have a similar function and role.	2.97363e-16
LR134386.1\|VEH22126.1\|4526555_4528415_+\|Cocaine-esterase	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	5.80728e-88
LR134386.1\|VEH22122.1\|4520998_4522249_-\|Glutamate-aspartate-carrier-protein	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	9.49262e-116
LR134386.1\|VEH22116.1\|4514381_4514630_-\|Fe/S-biogenesis-protein-NfuA	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	3.55764e-26
LR134386.1\|VEH22111.1\|4508613_4509267_+\|Uncharacterised-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.19185e-19
LR134386.1\|VEH22128.1\|4529458_4530301_-\|Regulatory-protein-of-adaptative-response	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	8.16167e-54
LR134386.1\|VEH22127.1\|4528616_4529228_-\|alkylated-DNA-repair-protein-AlkB	gnl\|CDD\|372627	pfam13532, 2OG-FeII_Oxy_2, 2OG-Fe(II) oxygenase superfamily.	8.20093e-29
LR134386.1\|VEH22110.1\|4507295_4508180_+\|Guanosine-5'-triphosphate,3'-diphosphate-pyrophosphatase	gnl\|CDD\|274735	TIGR03706, exo_poly_only, exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response. [Central intermediary metabolism, Phosphorus compounds].	3.56384e-60
LR134386.1\|VEH22124.1\|4522963_4523383_+\|Uncharacterized-protein-with-a-bacterial-SH3-domain-homologue	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	1.02515e-14
LR134386.1\|VEH22117.1\|4514679_4515786_-\|Cell-division-inhibitor-MinD	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.74679e-130
LR134386.1\|VEH22123.1\|4522470_4522953_+\|Predicted-periplasmic-or-secreted-lipoprotein	gnl\|CDD\|225379	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only].	0.000356077
LR134386.1\|VEH22119.1\|4516725_4519068_-\|Outer-membrane-receptor-for-ferrienterochelin-and-colicins	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.79889e-82
LR134386.1\|VEH22113.1\|4509542_4512581_+\|Por-secretion-system-C-terminal-sorting-domain	gnl\|CDD\|379073	pfam13205, Big_5, Bacterial Ig-like domain.	6.14967e-09
LR134386.1\|VEH22125.1\|4523459_4526165_+\|Uncharacterised-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.14896e-19
LR134386.1\|VEH22114.1\|4512898_4513288_+\|Protein-of-uncharacterised-function-(DUF3060)	gnl\|CDD\|371435	pfam11259, DUF3060, Protein of unknown function (DUF3060). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed.	1.46111e-08
LR134386.1\|VEH22121.1\|4520272_4520995_-\|Phytanoyl-CoA-dioxygenase-(PhyH)	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	2.79753e-10

>LR134386.1|VEH22118.1|4515936_4516392_+|Uncharacterised-protein
METIAYPSKYALPKEIFRIGKTRFKWYDLANNPSEISSDDIQNAKICIENANENFQNIEDLGFVIMHRCGENYLLLVCTWRSENELWESVYYDGSGKFEIWDRNKTHLPTYCVWEMGIVYHESQAWKKYLGTTRYESHKLEYLNNLFEGEV
>LR134386.1|VEH22117.1|4514679_4515786_-|Cell-division-inhibitor-MinD
MLTKEKVQDFLKEIEVDDLVSNFQVMGNDVYIDMTAHSPAMHEKKKLEAAMKQAFASEFGEEIHLKLKIVSPEPSEIQQSQIKGKQIPGIQNIIAIASGKGGVGKSTVSANMAVTLAKMGFKVGLLDADIYGPSVPTMFDTEGAKPISVEVNGKNLMKPVENYEVKMLSIGYFSGANQAVVWRGPMASKALNQMIRDAAWGELDFLLIDLPPGTGDIHLSIIQEVPVTGAVIVSTPQHVALADVRKGIAMFQMESINIPVLGLIENMAYFTPEELPDNKYYIFGNQGAQYLAEDLGIPVLGEIPLIQSIREAGDVGRPAALQEGSKIADIYTETARKMVESLVERNKNLPPTEAVKISTMAGCSPKAK
>LR134386.1|VEH22116.1|4514381_4514630_-|Fe/S-biogenesis-protein-NfuA
METNITHEDTVTRVMEALESIRPFLNKDGGDIELIDVKDNQVFVKLLGNCSGCSLNFSTLKLGVENTIKQHAPEIEKVINVE
>LR134386.1|VEH22115.1|4513307_4514018_+|Barstar-(barnase-inhibitor)
MFGFELDQGENSKIISFIDEVKNIEGTHSIAYKKVKLLNVNDMDAFKSAIESSSKAYDNHGFISVLDEQKNIVARTFISNIKIIKSKHNNITFVGHVWQHPKGFQRALDKKINKEITEKNIWKTFKKDELQGWLVCALNSNNIDKPKTNITIQIDGNEFHNLDGFLCTLGEEIHGPGGYFGRNLVALYDCLGGNFGVESVSELIWINHQKSKKLLKSKFKEILEIFEDYNVKISLN
>LR134386.1|VEH22114.1|4512898_4513288_+|Protein-of-uncharacterised-function-(DUF3060)
MKSIKTAGILAILLLGTGTAFSQSRKTESTKGVEQSNGKTIQVDGVGHTLNYTLNGGNVEVSGGDNTVTVKGSARKVSVSGTGNKIYIDKVDNVTIEGGNNTVYYRSSGTKSGKPNAALTGVGNKVSKQ
>LR134386.1|VEH22113.1|4509542_4512581_+|Por-secretion-system-C-terminal-sorting-domain
MINNYLLKGSVVAAFFFQSGLFGQTLIHYWNFNNNSSEAAITAPSSTLGNGSLVSIAGGTSVIDFAGGTGQNFNIDNLNARNGDLSGTHLRFNNPIGGALQFNLPTTGYNNVIVKFTTRRSGQGAGTQTWSYTTDGTTFVPYQTVTPQDANPQLISFDFSAVAGVSNNPNFKLKVEFSAIGGGTGGNNRFDNFTVDASPAGGVDTTPPTTAYLPTNNTNNASSIINPTISFNENVRLTDNSAITDSNAQNLVDFRLGNATGTQVPFTTTFSNNTITIIPTSGLVPGQMYYLALKPNTVEDFSDNAVTAITSSTFTTAGTSISLEKNFIKVEENAGTLAFKINVANPSTATVNLVVKPAPFSTADSNDFTLANQTININPSTTSYTVNIPIIDDTLEEQKAEYFVVSLENPTGATISGDHSATIYIVDNDKPAPVPSHEIKLNYIGSFDPSGNNNSSTEIVVHDPATQRLFTISSLTDVFDIIDFSSPTTPSVIKTVNMASYGGITSIAVKNGIIAAASPNTNPQQNGSVVFFDINGNFLKQVTVGALPDMVTFTPDGTKVITANEGEPNDTYTVDPEGTISIIDISGGIANLTQNNVTTLNFNNFDSQVAALTATGLRKVRTNNTLSQDLEPEYVTVSTDSQKAWVTLQENNAIAEVDLTTKNITGIWGLGKKDMSLPGNGFDASDNNGEILIANWPVKAYYLPDAVQNYKVGNTNYIVTANEGDEKDLPGYSERTTVGANIYTLDPAIFPNADILKASYNLGRFRVSSATGNTDGDADFEEIAALGARSFSIFNADTKQQVYDSGDQFERYIAANHPLIFNADNESNTIKSRSRAKGPEPEGVALGKINGQTYAFITLERTGGVMVYNITNPNNPTFTDYKHSRSTSAYGGDNGPEGIIYIAPENTTTQKGYAIIANEISGTLSMYEVAQSPTLATGEVKSEKETFNLFPNPVNKGNTLYFNRKQDYELYDMSGKLIGKEKNALLINTSTLSTGVYLVKTSEGHLKRVIVK
>LR134386.1|VEH22112.1|4509263_4509413_+|Uncharacterised-protein
MRDMLKRIVLVIFVLLVLTAVSGFLYMQKHPLEGAKSGTMLNFSGKTAK
>LR134386.1|VEH22111.1|4508613_4509267_+|Uncharacterised-protein
MNSIKIILTGATGMVGEGVLMECLENPNVSEILSVSRKPSGKKHPKLKEYLVPDFLSIDIHDENLKGYDACFFCAGISSVGMNEEDYTKITYETTIHFAEAVLHQNPEIVFNYVSGASTDSTESGKLMWARVKGRTENTLKRMSFKGAYNFRPGFMKPVEGQINVKWFFKPFIWFFPIFLPSKSLTLHEVGKAMINAVKKGYPSSTLEIRDIKNLAI
>LR134386.1|VEH22110.1|4507295_4508180_+|Guanosine-5'-triphosphate,3'-diphosphate-pyrophosphatase
MKIAAIDIGSNAARLLINEVKINNKKPEFIKLNLLRIPLRLGMDVFTIGKIGPEREKMVVDSMKIFSDLMKIYKVDHYRACATSAMRDAANGDEIIRQVQEASGINIEIISGDEEATLIYENHVAEGLDKEFAYLYIDVGGGSTELTFYENGKMVYERSFNIGTIRLLNNLVTIENWKEMREEIKKNIVSKKPIVAIGSGGNINKVFSMSKTKDGKPMSLAHLKKVHKEFNELSVEERMTKHSLREDRADVLVHALSIFNNVMAWSDINKIFVPKISVADGLIQNIYSQLQHKK
>LR134386.1|VEH22109.1|4506973_4507066_+|Uncharacterised-protein
MIKLLFFLIPVVFVSAQQKAISHFSIEDYK
>LR134386.1|VEH22119.1|4516725_4519068_-|Outer-membrane-receptor-for-ferrienterochelin-and-colicins
MKKILLSAIILLPAALFSQTITGKITQTGKAISYVEVIAVKGQKKQTAISDEKGNYSLRLSENGNYTIKLIQDGMEISNTDIAVNGDVKQDFFIEEKKEKQIEGVTLTARKKLIERKADRLVFNVAHSVASQGMDGADALATTPLVKVDENAGVSIAGKSGVAIMINERILNLSSAELVTYLKSLRSENIEKIEVITAPPAKYEAQGNSGLINIVLKKNQNLGWNGSFTTGFQQQTYSGFSNSTTINYQNEKLRSSLKLRQSKYQKHSFENYRITGAEGLKSHDDRIDFGDGLGANLSVDYQLGKKSNIGFIYDYGVGHSNMDIQNTSDYFQNDNYTNTLSTYAEHRGKSTQQTISAYYDVKFGKRDNKLSITGNYFSNLPKTTIDFTTIENSGDQFIVKSPSVVDYKIYSGQADLTLPYEFAKTEAGIKFTNFDNNSSIFYQNLEDGNYVTDVSKSNEFKYNEKNYAAYFSLEKSFNEKWSVKAGLRYEYSVVKGNSLTSGQQSESSYGNFFPTAYVSYKSDENNTFSLNYSKRIDRPGFRAINPYRWYTNINSYFTGNPFLQPSINHNFEFSHVYKGKLSTTLYFQRTLDGFGQLASLSGESRTSTFFNYYNQNSIGATINYSNTFFKRWETNYSADIAYSSMEVFATDALTKKGYSYVFDFQNNISLDKKKNIQLIANYWLRLPSNFGNKYSAFVGNFVAGFKMNLMDKNLQMSVIVSDIFKQARSRGEIYFTTGTHYFNNYYDARRLTVSVTYTFGNKKVKGVRRNVNFDEKDRAN
>LR134386.1|VEH22120.1|4519365_4520178_+|Uncharacterised-protein
MKKGLFVLSLLMTQIIDAQNHSQPKDHTTTLQEVIASPHIKADRIFDFSTKVEIIPQSPGDKIYYMMMDANDVNKKKKFIVYKKPFTISRTTRIQAYTERKREKSSIATANFNRRPNYWEVTTLSKVDPQYEATGKLALIDGIRGDIDWKKGDWQGYLGHNFEAVIDFQSPLQITQISSTYLQDNKARIIMPKKVEYYASMNAKDFILLNTIDNDIDPKDEKIQTKDFTTEILPTEARYLKVKAYYFGKLPGWHQKTGGETYIFVDEISV
>LR134386.1|VEH22121.1|4520272_4520995_-|Phytanoyl-CoA-dioxygenase-(PhyH)
MSLTNLSHSKSHIEKYGFSVINEVFAEAEVAQIINVLDTIDTSKENFRKSGDLFAIRQFLKEVPEIKNLIFNDNIQNLIKEIFGDRYFVVKSIYFDKPETSNWYVAYHQDLTISVDKKLELPNFGPWTTKQNQFAVQPPLSILENIYTIRIHLDDTDEHNGALKVVPDSHAKGIYRPETIDWNIETEEVCKVERGGVMLMKPLTLHGSNRTTNGKKRRVIHIEFSDMELPEVLQWAERMN
>LR134386.1|VEH22122.1|4520998_4522249_-|Glutamate-aspartate-carrier-protein
MKGQNKLFIAIIIALILGVGIGGIVHVQYPESAVPFSKNIKLLGTVFIRLVQMIIAPLVFTTLVVGIAKMSDIKMIGRVGTKAMLWFISASLISLFIGLILVNWLEPGHVTKLPVQDVASAEDLLKSSKSFSLEDFVKHMIPKSLFEAFATNEVLQIVVFAIMFGVALANLGEEYSKPVVKLFDIIAHGILKMVGYIMWFAPLGVLGAIAAVVATNGFEIFKVYAIYLRDFFFALGVLWLVLLLVGYFILGNRLFDLLKRIKEPLLIAFSTTSSEAVFPKLVEELEKFGCNSRVVSFILPLGYSFNLDGSMMYMTFASIFIAQIYGIEMTIGQQITMLLVLMLTSKGIAGVPRASLVIIVATCSMFGIPPEGIALILPIDHFCDMGRSMTNVLGNTLATSAVSKWEGQLTEPLDKI
>LR134386.1|VEH22123.1|4522470_4522953_+|Predicted-periplasmic-or-secreted-lipoprotein
MKKTIAMAALAVAVSFGAVSCKKKVSDADLQTQATTVVTSNPNASVEVKEGVAHLSGTFADQQSKDAMIAQLKAIKGVKEVMDMSKIEVAPAPVETKSAVDPAVQKKVQDAVKDFPTVKVEVINDELTLTGNVSKEQAKKIKQSVDALKVGKVKFNYTVK
>LR134386.1|VEH22124.1|4522963_4523383_+|Uncharacterized-protein-with-a-bacterial-SH3-domain-homologue
MSTLQDKYSGVVSAAQSAGISNLQVQEQDGILYVSGDASNTAAKDAVWNALGAIDSTYSASDINIDVQVAGLASGASLTVATDESNLNIRQEPSTEAAVVGKAAKGSAVTLIEQTSDDWWKVKTADGQEGYAYSRYLRA
>LR134386.1|VEH22125.1|4523459_4526165_+|Uncharacterised-protein
MKKILLFVFLVCNLLIVHAQRLHIDGKIFDPEKKTVENATIYLLKAKDSSIINYTATNKEGKFSLQTDEVREPSFLKIDTEKLSYSKALENIEQSLSLGDIQLEKKKVINIDEVKITVSPVKIKNDTIEFNASALKVRPDSQIDELLKQVPGVEIGNDGKITVNGKAVDQIMVNGKPFFDKDGKTALQNLPADIIKNIQFTTTKTKEEELTKRAPKSQNTTINFNIDEKKNKGLISKILAGYGSDKRYEGNVFLNYFKGDTKISALASANNINSKSSSGDQIFDTMGRGSGQQGGGIQKFSSFGLNYNDKLGKDANLDNLSLQYTDSETETRSKASKTTLLPDSTLKTDSESSNENESRQYNFNSSVGIKLDSLTNVYIAPSFSKSETFSAGRSISSTLKDNQLLNESKNITQTRGETNTFSPNINFFRNFRKKNRSLMAMINTSITESNNNNINQSLNTFYKDSGMTTDNRDQLQKTRSQDNNYSFMAKYTEPVSDSATIGFSLQYNSKLTRDIKDFNDFDPATGQYSQYNTRLSNSMDQRINQFTPELSYYLYKKKFGLWAMVNADISDMNVNSVFNGQLYNLQKNFVLPRYSTNIRYSFKDRQSLILSNSSSFTIPDPGKMIPFKDESNPLITNTGNPDLKNTWSNETNLSFNSYNIIKNLNYYIMAGFTYRNNDVINYSKYDNSGRQIITYSNISGNKSFSFSTGLTKTFKWNDHKLRIAPRFSMNYNYNNGFINGEAYKSRAYSFNPGLNLNYEIKDIFTIKPSYSLGYSFSNYTNYNVNTVNTTNQSLKVEVTNYLFQKTFFIGNDFSYNTNSNIAPGFKKDFYFWNASVGYSFYNKQLTAKIKVYDVLNQNQSVKRTITDSYFEDREDLILKRYIMFSLSMKLNKFAGKKPKKK
>LR134386.1|VEH22126.1|4526555_4528415_+|Cocaine-esterase
MKTPISVVFILLFILGKAQNTEQKDNFVKDNFTKKEFYIPMRDGVKLFTAVYIPKDISTKNKYPFLMQRTCYSIAPYGENEYKTKVGPNTYLMKDKYIFVYQDVRGRYMSEGTFTNMTPQVERKTKKDVDESTDTYDTIDWLLKNVKDNNGKVGQFGTSYPGFYTAVGTLAQHPALVASSPQAPISDFWNDDFLHNGRFMLGYFRTFPVFGVQKTKPEQKAWYMDSFIKQTSEDGLKFYRDMGTLKDGYEKYYKNNFFMTEIMNHTNYDEFWQKRGLLPHLKNINHAVMTVGGWFDAEDLSGPLNIYKTIEKTSPKAKNTIVMGPFSHGGWSQEQGKHFHSETYFGDSIATYYQKNVETKFFSHYLKGNTKEDAGLPEALMYDTGAKQWKEFTSYPPKNAQKVNFYLSDKTLKNTSGQGYSEYYSDPNNPVLSSDHLKDFNGFTPKNYMSEDQRFAVGRPDVLTFTTDVLTEDMTFAGEIMAKLNISSSSTDADFAVKLIDVYPEDFKPAEKKDGVIYGNYHQMVRSEIMPARFRNTKEKGEALVPDQKTAVNFRLQDVVHTFKKGHKIQIQISSTWFPLFALNPQKFMDNPNFASKEDYTKAFIKVYGDSSIEAEILK
>LR134386.1|VEH22127.1|4528616_4529228_-|alkylated-DNA-repair-protein-AlkB
MLSLFDETPDYPLSLLSYDGTVLYYGKVFSKDESDVYYDYLLNQIPWQNDEAVVFGKLILTKRKVAWFGEKAFEYTYSNRTKYAKPWTPELLKLKQKCEEVSGETYNSCLLNLYHDGSEGMAYHSDGETDLKKNGAIASLTFGAERKFLFKHKTTKEKVEIFLENGSLLIMKGTTQDNWLHRLPPTTKVKTPRVNLTFRTIEE
>LR134386.1|VEH22128.1|4529458_4530301_-|Regulatory-protein-of-adaptative-response
MSTQSQIDYNRIAKAIEYIQSNFRLQPSLEEVAENIHLSPAHFQKIFTDWAGTSPKKFLQFISLEHAKNLLKEEKASIFDTAYETGLSSTSRLHDLFVKIEGMSPAEYKNGGKSLVINYSFSESPFGNILVASTEKGICYMAFENDKETALGNLQHKFPNASFFEKQDILQKNALSIFNKDWTKLNTIKLHLKGTDFQLKVWESLLTIPMGKLSTYGSLAEKIGNPKASRAVGTAIGSNPVAFLIPCHRVIQSTGHLGGYRWGSDRKQMIVGWESSQLYS

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Crispr_ID: LR134386_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134386_4

4528519-4528628

Orphan

Consensus_repeat	Method
AATCTGCGAGAGCTTTTAATTCTTCAAT	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of LR134386_4

>merge|LR134386|4|4528519-4528628|CRISPRCasFinder
AATCTGCGAGAGCTTTTAATTCTTCAATAAAGACGATTATTTCCCACTGATTACACAGATTTTCACAGATGATTGCGTTATCAATCTGCGAGAGCTTTTTATTCTTCAAT

>LR134386|4|4|4528519-4528628|CRISPRCasFinder
AATCTGCGAGAGCTTTTAATTCTTCAAT	AAAGACGATTATTTCCCACTGATTACACAGATTTTCACAGATGATTGCGTTATC
AATCTGCGAGAGCTTTTTATTCTTCAAT

Protein	Signature genes	Signature genes Name	Protein_function
LR134386.1\|VEH22137.1\|4537726_4538683_-\|bifunctional-biotin--[acetyl-CoA-carboxylase]-synthetase/biotin-operon-repressor	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
LR134386.1\|VEH22133.1\|4534879_4535509_-\|Thiamine-pyrophosphokinase	unknown	unknown	gnl\|CDD\|153431
LR134386.1\|VEH22126.1\|4526555_4528415_+\|Cocaine-esterase	unknown	unknown	gnl\|CDD\|225487
LR134386.1\|VEH22118.1\|4515936_4516392_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22120.1\|4519365_4520178_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22121.1\|4520272_4520995_-\|Phytanoyl-CoA-dioxygenase-(PhyH)	unknown	unknown	gnl\|CDD\|368580
LR134386.1\|VEH22131.1\|4532268_4533663_-\|Biosynthetic-arginine-decarboxylase	unknown	unknown	gnl\|CDD\|143503
LR134386.1\|VEH22130.1\|4531493_4532153_+\|Phosphorylated-carbohydrates-phosphatase-TM_1254	unknown	unknown	gnl\|CDD\|319859
LR134386.1\|VEH22132.1\|4533785_4534661_-\|Tyrosine-protein-phosphatase-precursor	unknown	unknown	gnl\|CDD\|379135
LR134386.1\|VEH22124.1\|4522963_4523383_+\|Uncharacterized-protein-with-a-bacterial-SH3-domain-homologue	unknown	unknown	gnl\|CDD\|377965
LR134386.1\|VEH22129.1\|4530370_4531231_-\|Proclavaminate-amidinohydrolase	unknown	unknown	gnl\|CDD\|212539
LR134386.1\|VEH22117.1\|4514679_4515786_-\|Cell-division-inhibitor-MinD	unknown	unknown	gnl\|CDD\|378455
LR134386.1\|VEH22123.1\|4522470_4522953_+\|Predicted-periplasmic-or-secreted-lipoprotein	unknown	unknown	gnl\|CDD\|225379
LR134386.1\|VEH22119.1\|4516725_4519068_-\|Outer-membrane-receptor-for-ferrienterochelin-and-colicins	unknown	unknown	gnl\|CDD\|379720
LR134386.1\|VEH22136.1\|4537156_4537648_+\|DinB-family	unknown	unknown	gnl\|CDD\|225200
LR134386.1\|VEH22125.1\|4523459_4526165_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|379720
LR134386.1\|VEH22134.1\|4535498_4536158_-\|Cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
LR134386.1\|VEH22135.1\|4536395_4536980_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134386.1\|VEH22128.1\|4529458_4530301_-\|Regulatory-protein-of-adaptative-response	unknown	unknown	gnl\|CDD\|185333
LR134386.1\|VEH22122.1\|4520998_4522249_-\|Glutamate-aspartate-carrier-protein	unknown	unknown	gnl\|CDD\|234968

Protein	Function_ID	Function_description	E-value
LR134386.1\|VEH22137.1\|4537726_4538683_-\|bifunctional-biotin--[acetyl-CoA-carboxylase]-synthetase/biotin-operon-repressor	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.64095e-52
LR134386.1\|VEH22133.1\|4534879_4535509_-\|Thiamine-pyrophosphokinase	gnl\|CDD\|153431	cd07995, TPK, Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.	2.12358e-47
LR134386.1\|VEH22126.1\|4526555_4528415_+\|Cocaine-esterase	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	5.80728e-88
LR134386.1\|VEH22121.1\|4520272_4520995_-\|Phytanoyl-CoA-dioxygenase-(PhyH)	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	2.79753e-10
LR134386.1\|VEH22131.1\|4532268_4533663_-\|Biosynthetic-arginine-decarboxylase	gnl\|CDD\|143503	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase. This subfamily includes plants and biosynthetic prokaryotic arginine decarboxylases (ADC, EC 4.1.1.19). ADC is involved in the biosynthesis of putrescine, which is the precursor of aliphatic polyamines in many organisms. It catalyzes the decarboxylation of L-arginine to agmatine, which is then hydrolyzed to putrescine by agmatinase. ADC is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Homodimer formation and the presence of both PLP and Mg2+ cofactors may be required for catalytic activity. Prokaryotic ADCs (biodegradative), which are fold type I PLP-dependent enzymes, are not included in this family.	3.68943e-133
LR134386.1\|VEH22130.1\|4531493_4532153_+\|Phosphorylated-carbohydrates-phosphatase-TM_1254	gnl\|CDD\|319859	cd16423, HAD_BPGM-like, uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized Bacillus subtilis YhcW. This subfamily includes the uncharacterized Bacillus subtilis YhcW. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.83263e-49
LR134386.1\|VEH22132.1\|4533785_4534661_-\|Tyrosine-protein-phosphatase-precursor	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	4.90611e-69
LR134386.1\|VEH22124.1\|4522963_4523383_+\|Uncharacterized-protein-with-a-bacterial-SH3-domain-homologue	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	1.02515e-14
LR134386.1\|VEH22129.1\|4530370_4531231_-\|Proclavaminate-amidinohydrolase	gnl\|CDD\|212539	cd11593, Agmatinase-like_2, Agmatinase and related proteins. This family includes known and predicted bacterial and archaeal agmatinase (agmatine ureohydrolase; AUH; SpeB; EC=3.5.3.11), a binuclear manganese metalloenzyme that belongs to the ureohydrolase superfamily. It is a key enzyme in the synthesis of polyamine putrescine; it catalyzes hydrolysis of agmatine to yield urea and putrescine, the precursor for biosynthesis of higher polyamines, spermidine, and spermine. As compared to E. coli where two paths to putrescine exist, via decarboxylation of an amino acid, ornithine or arginine, a single path is found in Bacillus subtilis, where polyamine synthesis starts with agmatine; the speE and speB encode spermidine synthase and agmatinase, respectively. The level of agmatinase synthesis is very low, allowing strict control on the synthesis of putrescine and therefore, of all polyamines, consistent with polyamine levels in the cell. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	3.39924e-100
LR134386.1\|VEH22117.1\|4514679_4515786_-\|Cell-division-inhibitor-MinD	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.74679e-130
LR134386.1\|VEH22123.1\|4522470_4522953_+\|Predicted-periplasmic-or-secreted-lipoprotein	gnl\|CDD\|225379	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only].	0.000356077
LR134386.1\|VEH22119.1\|4516725_4519068_-\|Outer-membrane-receptor-for-ferrienterochelin-and-colicins	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.79889e-82
LR134386.1\|VEH22136.1\|4537156_4537648_+\|DinB-family	gnl\|CDD\|225200	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown].	1.21816e-12
LR134386.1\|VEH22125.1\|4523459_4526165_+\|Uncharacterised-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.14896e-19
LR134386.1\|VEH22134.1\|4535498_4536158_-\|Cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	4.3687e-85
LR134386.1\|VEH22128.1\|4529458_4530301_-\|Regulatory-protein-of-adaptative-response	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	8.16167e-54
LR134386.1\|VEH22122.1\|4520998_4522249_-\|Glutamate-aspartate-carrier-protein	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	9.49262e-116

>LR134386.1|VEH22126.1|4526555_4528415_+|Cocaine-esterase
MKTPISVVFILLFILGKAQNTEQKDNFVKDNFTKKEFYIPMRDGVKLFTAVYIPKDISTKNKYPFLMQRTCYSIAPYGENEYKTKVGPNTYLMKDKYIFVYQDVRGRYMSEGTFTNMTPQVERKTKKDVDESTDTYDTIDWLLKNVKDNNGKVGQFGTSYPGFYTAVGTLAQHPALVASSPQAPISDFWNDDFLHNGRFMLGYFRTFPVFGVQKTKPEQKAWYMDSFIKQTSEDGLKFYRDMGTLKDGYEKYYKNNFFMTEIMNHTNYDEFWQKRGLLPHLKNINHAVMTVGGWFDAEDLSGPLNIYKTIEKTSPKAKNTIVMGPFSHGGWSQEQGKHFHSETYFGDSIATYYQKNVETKFFSHYLKGNTKEDAGLPEALMYDTGAKQWKEFTSYPPKNAQKVNFYLSDKTLKNTSGQGYSEYYSDPNNPVLSSDHLKDFNGFTPKNYMSEDQRFAVGRPDVLTFTTDVLTEDMTFAGEIMAKLNISSSSTDADFAVKLIDVYPEDFKPAEKKDGVIYGNYHQMVRSEIMPARFRNTKEKGEALVPDQKTAVNFRLQDVVHTFKKGHKIQIQISSTWFPLFALNPQKFMDNPNFASKEDYTKAFIKVYGDSSIEAEILK
>LR134386.1|VEH22125.1|4523459_4526165_+|Uncharacterised-protein
MKKILLFVFLVCNLLIVHAQRLHIDGKIFDPEKKTVENATIYLLKAKDSSIINYTATNKEGKFSLQTDEVREPSFLKIDTEKLSYSKALENIEQSLSLGDIQLEKKKVINIDEVKITVSPVKIKNDTIEFNASALKVRPDSQIDELLKQVPGVEIGNDGKITVNGKAVDQIMVNGKPFFDKDGKTALQNLPADIIKNIQFTTTKTKEEELTKRAPKSQNTTINFNIDEKKNKGLISKILAGYGSDKRYEGNVFLNYFKGDTKISALASANNINSKSSSGDQIFDTMGRGSGQQGGGIQKFSSFGLNYNDKLGKDANLDNLSLQYTDSETETRSKASKTTLLPDSTLKTDSESSNENESRQYNFNSSVGIKLDSLTNVYIAPSFSKSETFSAGRSISSTLKDNQLLNESKNITQTRGETNTFSPNINFFRNFRKKNRSLMAMINTSITESNNNNINQSLNTFYKDSGMTTDNRDQLQKTRSQDNNYSFMAKYTEPVSDSATIGFSLQYNSKLTRDIKDFNDFDPATGQYSQYNTRLSNSMDQRINQFTPELSYYLYKKKFGLWAMVNADISDMNVNSVFNGQLYNLQKNFVLPRYSTNIRYSFKDRQSLILSNSSSFTIPDPGKMIPFKDESNPLITNTGNPDLKNTWSNETNLSFNSYNIIKNLNYYIMAGFTYRNNDVINYSKYDNSGRQIITYSNISGNKSFSFSTGLTKTFKWNDHKLRIAPRFSMNYNYNNGFINGEAYKSRAYSFNPGLNLNYEIKDIFTIKPSYSLGYSFSNYTNYNVNTVNTTNQSLKVEVTNYLFQKTFFIGNDFSYNTNSNIAPGFKKDFYFWNASVGYSFYNKQLTAKIKVYDVLNQNQSVKRTITDSYFEDREDLILKRYIMFSLSMKLNKFAGKKPKKK
>LR134386.1|VEH22124.1|4522963_4523383_+|Uncharacterized-protein-with-a-bacterial-SH3-domain-homologue
MSTLQDKYSGVVSAAQSAGISNLQVQEQDGILYVSGDASNTAAKDAVWNALGAIDSTYSASDINIDVQVAGLASGASLTVATDESNLNIRQEPSTEAAVVGKAAKGSAVTLIEQTSDDWWKVKTADGQEGYAYSRYLRA
>LR134386.1|VEH22123.1|4522470_4522953_+|Predicted-periplasmic-or-secreted-lipoprotein
MKKTIAMAALAVAVSFGAVSCKKKVSDADLQTQATTVVTSNPNASVEVKEGVAHLSGTFADQQSKDAMIAQLKAIKGVKEVMDMSKIEVAPAPVETKSAVDPAVQKKVQDAVKDFPTVKVEVINDELTLTGNVSKEQAKKIKQSVDALKVGKVKFNYTVK
>LR134386.1|VEH22122.1|4520998_4522249_-|Glutamate-aspartate-carrier-protein
MKGQNKLFIAIIIALILGVGIGGIVHVQYPESAVPFSKNIKLLGTVFIRLVQMIIAPLVFTTLVVGIAKMSDIKMIGRVGTKAMLWFISASLISLFIGLILVNWLEPGHVTKLPVQDVASAEDLLKSSKSFSLEDFVKHMIPKSLFEAFATNEVLQIVVFAIMFGVALANLGEEYSKPVVKLFDIIAHGILKMVGYIMWFAPLGVLGAIAAVVATNGFEIFKVYAIYLRDFFFALGVLWLVLLLVGYFILGNRLFDLLKRIKEPLLIAFSTTSSEAVFPKLVEELEKFGCNSRVVSFILPLGYSFNLDGSMMYMTFASIFIAQIYGIEMTIGQQITMLLVLMLTSKGIAGVPRASLVIIVATCSMFGIPPEGIALILPIDHFCDMGRSMTNVLGNTLATSAVSKWEGQLTEPLDKI
>LR134386.1|VEH22121.1|4520272_4520995_-|Phytanoyl-CoA-dioxygenase-(PhyH)
MSLTNLSHSKSHIEKYGFSVINEVFAEAEVAQIINVLDTIDTSKENFRKSGDLFAIRQFLKEVPEIKNLIFNDNIQNLIKEIFGDRYFVVKSIYFDKPETSNWYVAYHQDLTISVDKKLELPNFGPWTTKQNQFAVQPPLSILENIYTIRIHLDDTDEHNGALKVVPDSHAKGIYRPETIDWNIETEEVCKVERGGVMLMKPLTLHGSNRTTNGKKRRVIHIEFSDMELPEVLQWAERMN
>LR134386.1|VEH22120.1|4519365_4520178_+|Uncharacterised-protein
MKKGLFVLSLLMTQIIDAQNHSQPKDHTTTLQEVIASPHIKADRIFDFSTKVEIIPQSPGDKIYYMMMDANDVNKKKKFIVYKKPFTISRTTRIQAYTERKREKSSIATANFNRRPNYWEVTTLSKVDPQYEATGKLALIDGIRGDIDWKKGDWQGYLGHNFEAVIDFQSPLQITQISSTYLQDNKARIIMPKKVEYYASMNAKDFILLNTIDNDIDPKDEKIQTKDFTTEILPTEARYLKVKAYYFGKLPGWHQKTGGETYIFVDEISV
>LR134386.1|VEH22119.1|4516725_4519068_-|Outer-membrane-receptor-for-ferrienterochelin-and-colicins
MKKILLSAIILLPAALFSQTITGKITQTGKAISYVEVIAVKGQKKQTAISDEKGNYSLRLSENGNYTIKLIQDGMEISNTDIAVNGDVKQDFFIEEKKEKQIEGVTLTARKKLIERKADRLVFNVAHSVASQGMDGADALATTPLVKVDENAGVSIAGKSGVAIMINERILNLSSAELVTYLKSLRSENIEKIEVITAPPAKYEAQGNSGLINIVLKKNQNLGWNGSFTTGFQQQTYSGFSNSTTINYQNEKLRSSLKLRQSKYQKHSFENYRITGAEGLKSHDDRIDFGDGLGANLSVDYQLGKKSNIGFIYDYGVGHSNMDIQNTSDYFQNDNYTNTLSTYAEHRGKSTQQTISAYYDVKFGKRDNKLSITGNYFSNLPKTTIDFTTIENSGDQFIVKSPSVVDYKIYSGQADLTLPYEFAKTEAGIKFTNFDNNSSIFYQNLEDGNYVTDVSKSNEFKYNEKNYAAYFSLEKSFNEKWSVKAGLRYEYSVVKGNSLTSGQQSESSYGNFFPTAYVSYKSDENNTFSLNYSKRIDRPGFRAINPYRWYTNINSYFTGNPFLQPSINHNFEFSHVYKGKLSTTLYFQRTLDGFGQLASLSGESRTSTFFNYYNQNSIGATINYSNTFFKRWETNYSADIAYSSMEVFATDALTKKGYSYVFDFQNNISLDKKKNIQLIANYWLRLPSNFGNKYSAFVGNFVAGFKMNLMDKNLQMSVIVSDIFKQARSRGEIYFTTGTHYFNNYYDARRLTVSVTYTFGNKKVKGVRRNVNFDEKDRAN
>LR134386.1|VEH22118.1|4515936_4516392_+|Uncharacterised-protein
METIAYPSKYALPKEIFRIGKTRFKWYDLANNPSEISSDDIQNAKICIENANENFQNIEDLGFVIMHRCGENYLLLVCTWRSENELWESVYYDGSGKFEIWDRNKTHLPTYCVWEMGIVYHESQAWKKYLGTTRYESHKLEYLNNLFEGEV
>LR134386.1|VEH22117.1|4514679_4515786_-|Cell-division-inhibitor-MinD
MLTKEKVQDFLKEIEVDDLVSNFQVMGNDVYIDMTAHSPAMHEKKKLEAAMKQAFASEFGEEIHLKLKIVSPEPSEIQQSQIKGKQIPGIQNIIAIASGKGGVGKSTVSANMAVTLAKMGFKVGLLDADIYGPSVPTMFDTEGAKPISVEVNGKNLMKPVENYEVKMLSIGYFSGANQAVVWRGPMASKALNQMIRDAAWGELDFLLIDLPPGTGDIHLSIIQEVPVTGAVIVSTPQHVALADVRKGIAMFQMESINIPVLGLIENMAYFTPEELPDNKYYIFGNQGAQYLAEDLGIPVLGEIPLIQSIREAGDVGRPAALQEGSKIADIYTETARKMVESLVERNKNLPPTEAVKISTMAGCSPKAK
>LR134386.1|VEH22128.1|4529458_4530301_-|Regulatory-protein-of-adaptative-response
MSTQSQIDYNRIAKAIEYIQSNFRLQPSLEEVAENIHLSPAHFQKIFTDWAGTSPKKFLQFISLEHAKNLLKEEKASIFDTAYETGLSSTSRLHDLFVKIEGMSPAEYKNGGKSLVINYSFSESPFGNILVASTEKGICYMAFENDKETALGNLQHKFPNASFFEKQDILQKNALSIFNKDWTKLNTIKLHLKGTDFQLKVWESLLTIPMGKLSTYGSLAEKIGNPKASRAVGTAIGSNPVAFLIPCHRVIQSTGHLGGYRWGSDRKQMIVGWESSQLYS
>LR134386.1|VEH22129.1|4530370_4531231_-|Proclavaminate-amidinohydrolase
MKTYAGIPEENATLENSKVMLVTVPYDGTSTWGKGADKGPELFLDASENMELYDIETQTEPYLQGVYLAGEVSENSSPEAMTEAVYQKTKELLNNEGKVFTLFGGEHSVSIGSIRAVGEKFENLTVLQLDAHTDLRPEFHGSTSNHACAVFEANQKHNLVQVGIRSMDAEEAQYLPEGRVFFAHEIAHNENWVNDVLEKVSGNVYITIDLDAFDPSIAPSTGTPEPGGLQWYPTLELLRKVFEKCNVVAFDIVELMDSPMAKPTAFLAAKLYYKMLAYNDIYNNDN
>LR134386.1|VEH22130.1|4531493_4532153_+|Phosphorylated-carbohydrates-phosphatase-TM_1254
MSLKAVLFDMDGVIVDTEPLHRKAYFKTFDELEIAVSEDLYTSFTGASTKRVCETLISQFDLSHTHEAIAGIKRSHFKDYFYNDDEFDLIPGVKNLIQHYHENGIKLILASSATMITINMVFEKFGLEKYFSGKISGADLKESKPHPEVFLLAAEMAAESVENCMVIEDSTNGILAAHRANIFCAAYRSPHSKNQDYTLADTVVSDYEDLELDKISKYF
>LR134386.1|VEH22131.1|4532268_4533663_-|Biosynthetic-arginine-decarboxylase
MKIKYSELIDQTLYFPTEEFNVSENNLLFHDVPLMDVVEQFGTPLKISYLPRISQNIQKAKSWFKEAFEKIEYKKNYTYCYCTKSSHFNFVLEEALKNDISIETSSAYDMDIVKSLYEKGKVDKNIEVICNGFKTDDYLTNISDMINSGFGNITPILDNYRELDKLTESIDSTFNIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLKMLHFFINTGIKDTSYYWNELYKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYQYMVEEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANLYKIISQKRQNDREKWNMIDSSFMTTLPDTWAISRHFIMLPLNRWEDSYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDTKPLYIGFFHTGAYQETIGGYGGVHHCLMPQPRHVLIQKDENGELQYEIFREKQEPEDILRLLGYK
>LR134386.1|VEH22132.1|4533785_4534661_-|Tyrosine-protein-phosphatase-precursor
MNTFIKISVVTISLFCIFSCKTQHFERPEYGKNQTEKVIKIKKVHNFRAVGNIKNTEGRSLKEGMFYRSAHLHKLKEKSFDEFEKLGITEIIDLRNSKEIFESPDHLPNGITYKKYSAFEDEGDQLSQARKLVLKGKVNASDADKRMIDFYREYVTENPEIIKTIITEILESEKPVLYHCTAGKDRTGIVTALLLTILKFDKETIYNEYLLSNNFRKPLVEKRLRLANNLHFLYPKMDLQVLEKLSWVEKRYLDAAFGEIDKKYGSIDDYIQQVLGISEVKREGYIQKFTL
>LR134386.1|VEH22133.1|4534879_4535509_-|Thiamine-pyrophosphokinase
MRDKVLLFINGEAPRTFPNPDYYDLIACTDGAFHYLKRIGFPLDKLDFISGDFDSHSGSDENIYQEKFIHTPDQNHTDFYKALDIIIEKGGKNVDVFGGSGGEQDHFLGNLTVAYAFKDKLEVKFYDEFSEYYFIPKNFIIKGIKDKMVSLYPFPSAEKIITKGLNWPLDNGSLNITSRIGTRNFAVEDEVSITYEKGDLLIFIGKNYL
>LR134386.1|VEH22134.1|4535498_4536158_-|Cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MAKYILIIVLHTYHKYILLFTLSKKRYFSTMKIYTKTGDKGQTALYGGTRVSKASARVDSYGNIDELNSFIGIAKSHIEDEEVLRQLKKIQFDLFTVGSEAATPVDKLMLANGKSRLPIIISETEIEELEQWMDIFDEKLEPLQYFILPGGGKPATFLHAARTICRRAERSLVFLNEAEEVRPELIKYLNRLSDYLFVLARYISKLNNEPEEYWNPNER
>LR134386.1|VEH22135.1|4536395_4536980_-|Uncharacterised-protein
MKKYILPVMAAFLLVSCNKIEDKIDQTVQETTEKIQQKAQEAVEETVKKTVNESINSLTNSEDVKFNTVFPNAGSDMISEEKGKKIKLPTGTEGYIFKYKADIAVLLPFLENQATSNEEKSDKTARKIDGQSIINKISLLSKFLPNNTFDTSFLEDIKTDKSIQYYKLKRFPNSSTLIYNPKNQTIIQYVEVNK
>LR134386.1|VEH22136.1|4537156_4537648_+|DinB-family
MTTTATATQQFMTTEQLLKDWQGHRNLTRRVIEAFPEKELFEFSIGGMRPFAKMATELLNIGGVALKGIIENNMEAYNEEGFTPKTKEELLKKWDEETEVINHYFRQITETRFQETFNLFGQYEFPVYENILYFVDNEIHHRAQGYVYLRALGIEPPFFWERF
>LR134386.1|VEH22137.1|4537726_4538683_-|bifunctional-biotin--[acetyl-CoA-carboxylase]-synthetase/biotin-operon-repressor
MNDHYLKKLDRVTAILTQLQSKPVVRAQDLAEKFDVSVRTIYRDVKTLENAGIPIVGEAGNGYSLMEGYKLPPVMFTKEEVLSFITAEKLMQKFSHQSLGNHYQTAMEKVRSVLRYSDKNLIQNIEKQIDVFNFHTQQKEEDSLKNVIPIILESIAEKTQLTIEYQTVDSKVTNRTIEAVGIFFEFNFWYIMAYCTLRKDFRQFRVDRILQIFKTQTPFLQEYGQINDYRKSHGNKVKAKLLVDKKIMAHLVNSKKYYGLIEEVETDLGMELTFETEWINDGFPRWVITFADYATILEPESLRVRMGELLVKMMERHQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134386_1	1.4\|3443012\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443012-3443041	30	NC_014535	Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence	3632-3661	4	0.867
LR134386_1	1.3\|3442935\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3442935-3442964	30	NZ_CP017304	Rhodococcus sp. YL-1 plasmid pYLL2 sequence	195926-195955	6	0.8
LR134386_1	1.4\|3443012\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443012-3443041	30	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	35075-35104	6	0.8
LR134386_1	1.14\|3443782\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443782-3443811	30	NC_018687	Bacillus thuringiensis MC28 plasmid pMC189, complete sequence	35798-35827	6	0.8
LR134386_1	1.7\|3443243\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443243-3443272	30	MH937473	Streptococcus phage CHPC929, complete genome	4931-4960	7	0.767
LR134386_1	1.7\|3443243\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443243-3443272	30	MH937479	Streptococcus phage CHPC952, complete genome	5920-5949	7	0.767
LR134386_1	1.7\|3443243\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443243-3443272	30	MH937503	Streptococcus phage CHPC1084, complete genome	6043-6072	7	0.767
LR134386_1	1.7\|3443243\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443243-3443272	30	HE861935	Streptococcus phage TP-J34 complete genome	19062-19091	7	0.767
LR134386_1	1.7\|3443243\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443243-3443272	30	NC_002214	Streptococcus thermophilus bacteriophage Sfi11, complete genome	5879-5908	7	0.767
LR134386_1	1.11\|3443551\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443551-3443580	30	NC_015426	Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence	62299-62328	7	0.767
LR134386_1	1.2\|3442858\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3442858-3442887	30	NC_047824	Shewanella phage SppYZU05, complete genome	27673-27702	8	0.733
LR134386_1	1.5\|3443089\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443089-3443118	30	MN694751	Marine virus AFVG_250M1010, complete genome	20025-20054	8	0.733
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN693835	Marine virus AFVG_250M729, complete genome	6301-6330	8	0.733
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN694058	Marine virus AFVG_250M728, complete genome	6299-6328	8	0.733
LR134386_1	1.11\|3443551\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443551-3443580	30	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	245432-245461	8	0.733
LR134386_1	1.12\|3443628\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443628-3443657	30	NC_019516	Cyanophage S-TIM5, complete genome	73611-73640	8	0.733
LR134386_1	1.12\|3443628\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443628-3443657	30	MN698246	Pelagibacter phage HTVC112P, complete genome	7539-7568	8	0.733
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP039152	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-9, complete sequence	7550-7579	8	0.733
LR134386_1	1.17\|3444013\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3444013-3444042	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	119487-119516	8	0.733
LR134386_1	1.17\|3444013\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3444013-3444042	30	NZ_CP041249	Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence	38919-38948	8	0.733
LR134386_1	1.2\|3442858\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3442858-3442887	30	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	105724-105753	9	0.7
LR134386_1	1.5\|3443089\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443089-3443118	30	MN694136	Marine virus AFVG_250M984, complete genome	42598-42627	9	0.7
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN694733	Marine virus AFVG_250M925, complete genome	35983-36012	9	0.7
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN694340	Marine virus AFVG_250M926, complete genome	3977-4006	9	0.7
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN693955	Marine virus AFVG_250M927, complete genome	36153-36182	9	0.7
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN694131	Marine virus AFVG_250M1109, complete genome	4006-4035	9	0.7
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN693622	Marine virus AFVG_250M928, complete genome	36161-36190	9	0.7
LR134386_1	1.6\|3443166\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443166-3443195	30	MN694300	Marine virus AFVG_250M1108, complete genome	36042-36071	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MH807820	Dickeya phage Coodle, complete genome	61622-61651	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN813053	Dickeya phage Ds25CZ, complete genome	58824-58853	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN813049	Dickeya phage Ds9CZ, complete genome	61111-61140	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	KM209320	Dickeya phage phiDP23.1 clone pD23.contig.46_1 genomic sequence	39011-39040	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	KM209228	Dickeya phage phiD3, complete genome	60361-60390	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN788369	Dickeya phage Ds3CZ, complete genome	61111-61140	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	KY942057	Dickeya phage XF4, complete genome	60578-60607	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN813048	Dickeya phage Ds5CZ, complete genome	61117-61146	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN813051	Dickeya phage Ds20CZ, complete genome	61109-61138	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN813052	Dickeya phage Ds23CZ, complete genome	58669-58698	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	HE600015	Dickeya phage vB_DsoM_LIMEstone1 complete genome	60170-60199	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MH807812	Dickeya phage Kamild, complete genome	60634-60663	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	KY942056	Dickeya phage JA15, complete genome	60607-60636	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MG266157	Dickeya phage PP35, complete genome	60626-60655	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	KJ716335	Dickeya phage RC-2014, complete genome	35648-35677	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	KM209270	Dickeya phage phiDP10.3 clone pD10.contig.41_1 genomic sequence	103290-103319	9	0.7
LR134386_1	1.13\|3443705\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443705-3443734	30	MN813050	Dickeya phage Ds16CZ, complete genome	60614-60643	9	0.7
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP024110	Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence	61156-61185	9	0.7
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP024118	Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence	70969-70998	9	0.7
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP024108	Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence	43986-44015	9	0.7
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP024100	Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence	23288-23317	9	0.7
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP024115	Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence	30951-30980	9	0.7
LR134386_1	1.16\|3443936\|30\|LR134386\|CRISPRCasFinder,PILER-CR	3443936-3443965	30	NZ_CP024097	Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence	48146-48175	9	0.7

1. spacer 1.4|3443012|30|LR134386|CRISPRCasFinder,PILER-CR matches to NC_014535 (Gloeothece verrucosa PCC 7822 plasmid Cy782206, complete sequence) position: , mismatch: 4, identity: 0.867

tttaagacgaattataaaaactaatt-tata	CRISPR spacer
gtcaagacgaattattaaaactaattctat-	Protospacer
 *.************ ********** ***

2. spacer 1.3|3442935|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 6, identity: 0.8

tatggaaaacgttatcgacgcagctcaaag	CRISPR spacer
tatggaaaacgttatcgaagccgccaagat	Protospacer
****************** ** **. *.*

3. spacer 1.4|3443012|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 6, identity: 0.8

tttaagacgaattataaaaactaatttata	CRISPR spacer
taaaagaagaattataaaaattaattaaca	Protospacer
*  **** ************.***** *.*

4. spacer 1.14|3443782|30|LR134386|CRISPRCasFinder,PILER-CR matches to NC_018687 (Bacillus thuringiensis MC28 plasmid pMC189, complete sequence) position: , mismatch: 6, identity: 0.8

taatattggggtttttcttcaattgaagga	CRISPR spacer
taatattggtgtttttcttcaaatgatttc	Protospacer
********* ************ ***

5. spacer 1.7|3443243|30|LR134386|CRISPRCasFinder,PILER-CR matches to MH937473 (Streptococcus phage CHPC929, complete genome) position: , mismatch: 7, identity: 0.767

ttcatttgaaaaatcctatctgttttaatg	CRISPR spacer
ggcatttaaaaaatcctttctgttttagat	Protospacer
  *****.********* *********.

6. spacer 1.7|3443243|30|LR134386|CRISPRCasFinder,PILER-CR matches to MH937479 (Streptococcus phage CHPC952, complete genome) position: , mismatch: 7, identity: 0.767

ttcatttgaaaaatcctatctgttttaatg	CRISPR spacer
ggcatttaaaaaatcctttctgttttagat	Protospacer
  *****.********* *********.

7. spacer 1.7|3443243|30|LR134386|CRISPRCasFinder,PILER-CR matches to MH937503 (Streptococcus phage CHPC1084, complete genome) position: , mismatch: 7, identity: 0.767

ttcatttgaaaaatcctatctgttttaatg	CRISPR spacer
ggcatttaaaaaatcctttctgttttagat	Protospacer
  *****.********* *********.

8. spacer 1.7|3443243|30|LR134386|CRISPRCasFinder,PILER-CR matches to HE861935 (Streptococcus phage TP-J34 complete genome) position: , mismatch: 7, identity: 0.767

ttcatttgaaaaatcctatctgttttaatg	CRISPR spacer
ggcatttaaaaaatcctttctgttttagat	Protospacer
  *****.********* *********.

9. spacer 1.7|3443243|30|LR134386|CRISPRCasFinder,PILER-CR matches to NC_002214 (Streptococcus thermophilus bacteriophage Sfi11, complete genome) position: , mismatch: 7, identity: 0.767

ttcatttgaaaaatcctatctgttttaatg	CRISPR spacer
ggcatttaaaaaatcctttctgttttagat	Protospacer
  *****.********* *********.

10. spacer 1.11|3443551|30|LR134386|CRISPRCasFinder,PILER-CR matches to NC_015426 (Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

gaatattattcgatccggcaatccaataat	CRISPR spacer
aactattattccatccggcattccaactaa	Protospacer
.* ******** ******** *****. *

11. spacer 1.2|3442858|30|LR134386|CRISPRCasFinder,PILER-CR matches to NC_047824 (Shewanella phage SppYZU05, complete genome) position: , mismatch: 8, identity: 0.733

tgctgaagtcgtaggtgagtggcaagacat	CRISPR spacer
catgcaagtcgcaggtgagtggcaagacgc	Protospacer
...  ******.****************..

12. spacer 1.5|3443089|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694751 (Marine virus AFVG_250M1010, complete genome) position: , mismatch: 8, identity: 0.733

aggctaaaagaaaagaggctcttaagtgta	CRISPR spacer
ccgctaaaagaaaagagcttcttaataaga	Protospacer
  *************** .******  . *

13. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN693835 (Marine virus AFVG_250M729, complete genome) position: , mismatch: 8, identity: 0.733

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
gatgaaatctgctgataatgcacaggcttt	Protospacer
 .   ********** ********** *.*

14. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694058 (Marine virus AFVG_250M728, complete genome) position: , mismatch: 8, identity: 0.733

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
gatgaaatctgctgataatgcacaggcttt	Protospacer
 .   ********** ********** *.*

15. spacer 1.11|3443551|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.733

gaatattattcgatccggcaatccaataat	CRISPR spacer
ttctattattccatccggctatccaatggc	Protospacer
   ******** ******* *******...

16. spacer 1.12|3443628|30|LR134386|CRISPRCasFinder,PILER-CR matches to NC_019516 (Cyanophage S-TIM5, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatagtatttgcaaccgtagaaagtat	CRISPR spacer
agaaatagtattagcaaacgtagaaacacc	Protospacer
..********** **** ********   .

17. spacer 1.12|3443628|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN698246 (Pelagibacter phage HTVC112P, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatagtatttgcaaccgtagaaagtat	CRISPR spacer
agatacagtatttgcaatcgtagaaagaga	Protospacer
..* *.***********.********* .

18. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP039152 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-9, complete sequence) position: , mismatch: 8, identity: 0.733

tgaacagataattaccaatatttcccttga	CRISPR spacer
tatcgagaaaattaccaatatttcccattt	Protospacer
*.   *** ***************** *

19. spacer 1.17|3444013|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaataaaatatactgtaagccttacaaa	CRISPR spacer
tgatgcaaaagatattgtaagccttacaat	Protospacer
 .* ..**** ***.**************

20. spacer 1.17|3444013|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP041249 (Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaataaaatatactgtaagccttacaaa	CRISPR spacer
ccgggtgaaatgtaccgtaagccttacaaa	Protospacer
  ...*.****.***.**************

21. spacer 1.2|3442858|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.7

tgctgaagtcgtaggtgagtggcaagacat	CRISPR spacer
cgccgaagtcgtaggtgagcggcacccggg	Protospacer
.**.***************.****    .

22. spacer 1.5|3443089|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694136 (Marine virus AFVG_250M984, complete genome) position: , mismatch: 9, identity: 0.7

aggctaaaagaaaagaggctcttaagtgta	CRISPR spacer
ttcacaaaaggaaagaggctcttaagtagc	Protospacer
    .*****.****************.

23. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694733 (Marine virus AFVG_250M925, complete genome) position: , mismatch: 9, identity: 0.7

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
aatgaaatctgctgataatgcacaggcgtt	Protospacer
 .   ********** **********  .*

24. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694340 (Marine virus AFVG_250M926, complete genome) position: , mismatch: 9, identity: 0.7

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
aatgaaatctgctgataatgcacaggcgtt	Protospacer
 .   ********** **********  .*

25. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN693955 (Marine virus AFVG_250M927, complete genome) position: , mismatch: 9, identity: 0.7

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
aatgaaatctgctgataatgcacaggcgtt	Protospacer
 .   ********** **********  .*

26. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694131 (Marine virus AFVG_250M1109, complete genome) position: , mismatch: 9, identity: 0.7

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
aatgaaatctgctgataatgcacaggcgtt	Protospacer
 .   ********** **********  .*

27. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN693622 (Marine virus AFVG_250M928, complete genome) position: , mismatch: 9, identity: 0.7

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
aatgaaatctgctgataatgcacaggcgtt	Protospacer
 .   ********** **********  .*

28. spacer 1.6|3443166|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN694300 (Marine virus AFVG_250M1108, complete genome) position: , mismatch: 9, identity: 0.7

tggtcaatctgctgaaaatgcacagggtct	CRISPR spacer
aatgaaatctgctgataatgcacaggcgtt	Protospacer
 .   ********** **********  .*

29. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MH807820 (Dickeya phage Coodle, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

30. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN813053 (Dickeya phage Ds25CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

31. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN813049 (Dickeya phage Ds9CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

32. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to KM209320 (Dickeya phage phiDP23.1 clone pD23.contig.46_1 genomic sequence) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

33. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to KM209228 (Dickeya phage phiD3, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

34. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN788369 (Dickeya phage Ds3CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

35. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to KY942057 (Dickeya phage XF4, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

36. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN813048 (Dickeya phage Ds5CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

37. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN813051 (Dickeya phage Ds20CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

38. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN813052 (Dickeya phage Ds23CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

39. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to HE600015 (Dickeya phage vB_DsoM_LIMEstone1 complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

40. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MH807812 (Dickeya phage Kamild, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

41. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to KY942056 (Dickeya phage JA15, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

42. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MG266157 (Dickeya phage PP35, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

43. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to KJ716335 (Dickeya phage RC-2014, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

44. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to KM209270 (Dickeya phage phiDP10.3 clone pD10.contig.41_1 genomic sequence) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

45. spacer 1.13|3443705|30|LR134386|CRISPRCasFinder,PILER-CR matches to MN813050 (Dickeya phage Ds16CZ, complete genome) position: , mismatch: 9, identity: 0.7

atgcagatgtgaatttgtacagcatgtacc	CRISPR spacer
ctgctgatgtgaatttgttcagcacaccat	Protospacer
 *** ************* *****...  .

46. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP024110 (Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence) position: , mismatch: 9, identity: 0.7

tgaacagataattaccaatatttcccttga	CRISPR spacer
gaaacagataattaccaagatttaagtgtg	Protospacer
 .**************** ****   *  .

47. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP024118 (Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence) position: , mismatch: 9, identity: 0.7

tgaacagataattaccaatatttcccttga	CRISPR spacer
gaaacagataattaccaagatttaagtgtg	Protospacer
 .**************** ****   *  .

48. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP024108 (Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence) position: , mismatch: 9, identity: 0.7

tgaacagataattaccaatatttcccttga	CRISPR spacer
gaaacagataattaccaagatttaagtgtg	Protospacer
 .**************** ****   *  .

49. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP024100 (Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence) position: , mismatch: 9, identity: 0.7

tgaacagataattaccaatatttcccttga	CRISPR spacer
gaaacagataattaccaagatttaagtgtg	Protospacer
 .**************** ****   *  .

50. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP024115 (Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence) position: , mismatch: 9, identity: 0.7

tgaacagataattaccaatatttcccttga	CRISPR spacer
gaaacagataattaccaagatttaagtgtg	Protospacer
 .**************** ****   *  .

51. spacer 1.16|3443936|30|LR134386|CRISPRCasFinder,PILER-CR matches to NZ_CP024097 (Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence) position: , mismatch: 9, identity: 0.7

tgaacagataattaccaatatttcccttga	CRISPR spacer
gaaacagataattaccaagatttaagtgtg	Protospacer
 .**************** ****   *  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

142765 : 147649

Cellulophaga_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEH18117.1\|142765_143512_-	Serine/threonine-protein phosphatase 1	S0A0Y6	Cellulophaga_phage	1.4e-44	38.8
VEH18118.1\|143588_144131_-	RNA 2'-phosphotransferase	A0A0A8WJJ2	Clostridium_phage	1.8e-46	52.0
VEH18119.1\|144147_144627_-	Uncharacterised protein	NA	NA	NA	NA
VEH18120.1\|144623_145571_-	ADP-ribosyl-[dinitrogen reductase] glycohydrolase	A0A1S6UB21	Serratia_phage	1.2e-45	34.1
VEH18121.1\|145570_146257_-	NAD-dependent deacetylase	R9TG77	Vibrio_phage	5.0e-33	40.9
VEH18122.1\|146321_146837_-	O-acetyl-ADP-ribose deacetylase	A0A0K1L687	Scale_drop_disease_virus	6.3e-33	43.3
VEH18123.1\|146833_147649_-	Uncharacterized protein conserved in bacteria	G3MBH6	Bacillus_virus	2.1e-46	41.2

DBSCAN-SWA_2

1080776 : 1088642

Beihai_hepe-like_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEH18968.1\|1080776_1081553_+	Uncharacterised protein	A0A0F6YPJ3	Sinorhizobium_phage	1.1e-17	27.3
VEH18969.1\|1081569_1081935_+	Uncharacterised protein	A0A142EZZ6	Stenotrophomonas_phage	8.8e-21	47.0
VEH18970.1\|1081934_1082498_+	DinB superfamily	NA	NA	NA	NA
VEH18971.1\|1082502_1083516_+	RNA ligase, Rnl2 family	A0A2P1EL87	Moumouvirus	5.8e-38	33.5
VEH18972.1\|1083683_1084625_+	ribonuclease Z	NA	NA	NA	NA
VEH18973.1\|1084750_1085314_+	Predicted phosphoesterase or phosphohydrolase	A0A292GAJ3	Xanthomonas_phage	3.8e-39	46.2
VEH18974.1\|1085389_1085935_+	sporulation inhibitor KapD	A0A1L3KJF4	Beihai_hepe-like_virus	1.6e-10	26.7
VEH18975.1\|1086004_1086556_+	sporulation inhibitor KapD	A0A1L3KJF4	Beihai_hepe-like_virus	5.6e-11	31.2
VEH18976.1\|1086668_1088642_+	conjugal transfer relaxase TraA	H7BUJ6	unidentified_phage	4.4e-82	41.1

DBSCAN-SWA_3

4423194 : 4431550

Pelagibacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEH22025.1\|4423194_4423989_-	NH(3)-dependent NAD(+) synthetase	M1IPF8	Pelagibacter_phage	2.1e-59	51.8
VEH22026.1\|4424003_4424537_-	Predicted acetyltransferase	A0A1P8CWJ6	Bacillus_phage	9.5e-40	48.5
VEH22027.1\|4424545_4425109_-	Spermidine N(1)-acetyltransferase	G9BWD5	Planktothrix_phage	2.0e-16	34.1
VEH22028.1\|4425074_4425716_-	Internalin-J precursor	NA	NA	NA	NA
VEH22029.1\|4425717_4426752_+	gliding motility-associated lipoprotein GldB	NA	NA	NA	NA
VEH22030.1\|4426835_4427738_+	Fluoroquinolones export ATP-binding protein Rv2688c/MT2762	A0A2H4PQG7	Staphylococcus_phage	6.5e-41	45.7
VEH22031.1\|4427745_4429947_+	Thiol-disulfide oxidoreductase resA	A0A1J0GW78	Streptomyces_phage	2.2e-05	37.1
VEH22032.1\|4429971_4430295_+	gliding motility-associated protein GldC	NA	NA	NA	NA
VEH22033.1\|4430410_4431550_+	Cystathionine beta-lyase	A0A0B5JD48	Pandoravirus	9.8e-26	30.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134386

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection