CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134409	Kocuria rhizophila strain NCTC8340 genome assembly, chromosome: 1	1 crisprs	DinG,DEDDh,WYL,csa3	0	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: LR134409_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134409_1

2108140-2108248

Orphan

Consensus_repeat	Method
CGCACTGGCCCCGTGGGGTCCTGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134409_1

>merge|LR134409|1|2108140-2108248|CRISPRCasFinder
CGCACTGGCCCCGTGGGGTCCTGCGAGGCCAGCGGCGCCCTGCGGGACCGGTGGCTCGGTGGCAGGACCGAGATCGGCGGCAACGCTCTGGCCCCGTGGGGTCCTGCGA

>LR134409|1|1|2108140-2108248|CRISPRCasFinder
CGCACTGGCCCCGTGGGGTCCTGCGA	GGCCAGCGGCGCCCTGCGGGACCGGTGGCTCGGTGGCAGGACCGAGATCGGCGGCAA
CGCTCTGGCCCCGTGGGGTCCTGCGA

Protein	Signature genes	Signature genes Name	Protein_function
LR134409.1\|VEH75706.1\|2106910_2108002_-\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
LR134409.1\|VEH75700.1\|2099155_2099872_-\|Purine-nucleoside-phosphorylase-deoD-type	unknown	unknown	gnl\|CDD\|350157
LR134409.1\|VEH75711.1\|2116948_2117320_-\|Holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|234610
LR134409.1\|VEH75714.1\|2120508_2120973_+\|Large-conductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|376605
LR134409.1\|VEH75703.1\|2103808_2104606_+\|Uncharacterized-phosphatase-SCO2771	unknown	unknown	gnl\|CDD\|374030
LR134409.1\|VEH75702.1\|2102457_2103798_+\|D-inositol-3-phosphate-glycosyltransferase	unknown	unknown	gnl\|CDD\|340830
LR134409.1\|VEH75699.1\|2097638_2099150_-\|High-copy-suppressor-of-rspA	unknown	unknown	gnl\|CDD\|129794
LR134409.1\|VEH75709.1\|2112747_2114925_-\|Glycogen-debranching-enzyme	unknown	unknown	gnl\|CDD\|131155
LR134409.1\|VEH75708.1\|2110218_2112588_-\|Maltooligosyl-trehalose-synthase	unknown	unknown	gnl\|CDD\|237740
LR134409.1\|VEH75715.1\|2121041_2122397_-\|Phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237672
LR134409.1\|VEH75698.1\|2096866_2097556_-\|UGMP-family-protein	unknown	unknown	gnl\|CDD\|274750
LR134409.1\|VEH75713.1\|2119474_2120431_+\|Pantothenate-kinase	unknown	unknown	gnl\|CDD\|235466
LR134409.1\|VEH75712.1\|2117517_2119401_-\|Glucosamine--fructose-6-phosphate-aminotransferase-[isomerizing]	unknown	unknown	gnl\|CDD\|234729
LR134409.1\|VEH75705.1\|2106044_2106914_-\|Threonine-efflux-protein	unknown	unknown	gnl\|CDD\|224199
LR134409.1\|VEH75697.1\|2096312_2096870_-\|ribosomal-protein-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|273701
LR134409.1\|VEH75704.1\|2104708_2105794_-\|Inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|132491
LR134409.1\|VEH75701.1\|2100252_2102199_-\|Alanine-racemase	unknown	unknown	gnl\|CDD\|143481
LR134409.1\|VEH75710.1\|2115009_2116956_-\|Nicotinamide-nucleotide-repair-protein	unknown	unknown	gnl\|CDD\|238576
LR134409.1\|VEH75716.1\|2122445_2123486_-\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
LR134409.1\|VEH75707.1\|2108394_2110215_-\|Malto-oligosyltrehalose-trehalohydrolase	unknown	unknown	gnl\|CDD\|274114

Protein	Function_ID	Function_description	E-value
LR134409.1\|VEH75706.1\|2106910_2108002_-\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
LR134409.1\|VEH75700.1\|2099155_2099872_-\|Purine-nucleoside-phosphorylase-deoD-type	gnl\|CDD\|350157	cd09006, PNP_EcPNPI-like, purine nucleoside phosphorylases similar to Escherichia coli PNP-I (DeoD) and Trichomonas vaginalis PNP. Escherichia coli purine nucleoside phosphorylase (PNP)-I (or DeoD) accepts both 6-oxo and 6-amino purine nucleosides as substrates. Trichomonas vaginalis PNP has broad substrate specificity, having phosphorolytic catalytic activity with adenosine, inosine, and guanosine (with adenosine as the preferred substrate). This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	1.30922e-133
LR134409.1\|VEH75711.1\|2116948_2117320_-\|Holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	4.91798e-51
LR134409.1\|VEH75714.1\|2120508_2120973_+\|Large-conductance-mechanosensitive-channel	gnl\|CDD\|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	2.09746e-45
LR134409.1\|VEH75703.1\|2103808_2104606_+\|Uncharacterized-phosphatase-SCO2771	gnl\|CDD\|374030	pfam15698, Phosphatase, Phosphatase. Members of this family have phosphatase activity.	2.15229e-125
LR134409.1\|VEH75702.1\|2102457_2103798_+\|D-inositol-3-phosphate-glycosyltransferase	gnl\|CDD\|340830	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.	8.76351e-104
LR134409.1\|VEH75699.1\|2097638_2099150_-\|High-copy-suppressor-of-rspA	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	9.3313e-16
LR134409.1\|VEH75709.1\|2112747_2114925_-\|Glycogen-debranching-enzyme	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
LR134409.1\|VEH75708.1\|2110218_2112588_-\|Maltooligosyl-trehalose-synthase	gnl\|CDD\|237740	PRK14511, PRK14511, malto-oligosyltrehalose synthase.	0
LR134409.1\|VEH75715.1\|2121041_2122397_-\|Phosphoglucosamine-mutase	gnl\|CDD\|237672	PRK14318, glmM, phosphoglucosamine mutase; Provisional.	0
LR134409.1\|VEH75698.1\|2096866_2097556_-\|UGMP-family-protein	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	5.11797e-53
LR134409.1\|VEH75713.1\|2119474_2120431_+\|Pantothenate-kinase	gnl\|CDD\|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
LR134409.1\|VEH75712.1\|2117517_2119401_-\|Glucosamine--fructose-6-phosphate-aminotransferase-[isomerizing]	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LR134409.1\|VEH75705.1\|2106044_2106914_-\|Threonine-efflux-protein	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.05357e-10
LR134409.1\|VEH75697.1\|2096312_2096870_-\|ribosomal-protein-alanine-N-acetyltransferase	gnl\|CDD\|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR\|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	5.32715e-27
LR134409.1\|VEH75704.1\|2104708_2105794_-\|Inositol-3-phosphate-synthase	gnl\|CDD\|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
LR134409.1\|VEH75701.1\|2100252_2102199_-\|Alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	1.94441e-141
LR134409.1\|VEH75710.1\|2115009_2116956_-\|Nicotinamide-nucleotide-repair-protein	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	1.18505e-42
LR134409.1\|VEH75716.1\|2122445_2123486_-\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	1.15662e-156
LR134409.1\|VEH75707.1\|2108394_2110215_-\|Malto-oligosyltrehalose-trehalohydrolase	gnl\|CDD\|274114	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0

>LR134409.1|VEH75706.1|2106910_2108002_-|L-glyceraldehyde-3-phosphate-reductase
MLIYGDDTVWTPAENRYETMPYRRVGESGLKLPAVSLGLWHNFGDDKPVAGMRATLRRAFDLGITHFDLANNYGPPAGSAELNFGRILKEDFAGHRHELVISTKAGWDMWPGPYGDVGGSRQYLVTSLDQSLERMGLDHVDVFYHHRPDPETPLEETMQALDHIVRSGRATYVGVSSYGADLTLEAQRIMRELGTPLVIHQPSYSMLNRWIEQPNEQAGGKNLLGALTETGMGSICFTPLAQGMLTDKYLHGVPEGSRASEDKSLDPSWLSEQTLDQIRELNTMAQERGQTLAQMAIAWTLRPQDSGQVTSALVGASSARQIEDSARAVANLEFSAEELRRIDGLVTDAGVNIWSAATDSKHA
>LR134409.1|VEH75705.1|2106044_2106914_-|Threonine-efflux-protein
MTGAQYAALLGLWIAGIVVPGPDIFIILRNAFLSSRRSAVFTALGVMVGNLAWITLSLLGVTVFISGNHVLKLVVQIGGALFLVRMGYGAIRAGLAARSGAAVGHSRVVASTEPGASGADDDVAAAVGAPHASQRLGAQSSGHGEVASSLTSGPAAQPPTDPLMADDAAVAEEIAAGGRTTLLGASGLTPLRALVQGTVTNLANAKAVVFFVALFGSVVPAGLQWWEGLTALGMLVAVGLAWFLAVAWLGSVPALARRFRARSAEVEIVSGVVFVLVALGLFVEAVLTV
>LR134409.1|VEH75704.1|2104708_2105794_-|Inositol-3-phosphate-synthase
MSEHPIRVAIAGVGNCATSLIQGVHFYRDADPSDSVPGLMHVQFGDYHVRDVQFVAAFDVDAAKVGLDLSQAILAGENNTMEIAKVPPLDVTVDRGPTLDGLGQYYRETITESDAEPVDVAQVLREREVDVLVSYLPVGSEEADRFYAQAAIDAGVAFVNALPVFIAGTDEWAQKFTDAGLPIVGDDIKSQVGATITHRVLAKLLEDRGYVLDRTYQLNVGGNMDFKNMLERSRLESKKISKTQAVTSNVPHEMRAKDVHIGPSDYVGWLDDRKFAFVRLEGHGFGNAPISLEYKLEVWDSPNSAGVIIDAIRAAKIGLDRGIGGPLTSASSYFMKSPPEQFDDDTARENVEKFIRGEVER
>LR134409.1|VEH75703.1|2103808_2104606_+|Uncharacterized-phosphatase-SCO2771
MTTAYLSRDALARYLDRSRITGAVATPREANLRNVQGFLDGDQHQHMGVERTREWDFDSVFGLMRDRVGINDDPSYVSGQDSISAQLCVARLDEYAEIFSRAVQGRKRLLFATGHPSGLAPVYARLARVARASGARVIRFDEALPFEDGDVRQIEDVVMVEQYGGLRHTHFPEPMRLVLEHLQEQGRQAPDLVIADHGMAGWAGSRAGLPTIAMGDCNDPGIFVAEAQGQVEVVVPLDDNVAPHLYDPLVDYIISRAGLAGQERP
>LR134409.1|VEH75702.1|2102457_2103798_+|D-inositol-3-phosphate-glycosyltransferase
MPPACPDRVLLLSMHTSPVDQPGSGDAGGMNVYVWHLARALAQAGWRVDMATLDRDPSRTEGVHPTDLAPGIRLLAVSLPGAGAAPKQDLPRFAEPFGRALAHFYDGDDAAPRVLHAHYWLSAVAGVELAEHLHAPLMLTLHTSAAAKNLRAGADEAPETREREEAERFVVSRACRTVVNTPVEKHQLVELYGADPERVEVIPPGVDPTVFRPVPREPLPRSPRSAAVPRAGDHPAAHPDDAPSAPSGDPGASPDHQAPFTVLCAGRMQPLKGQQVLVRALGQLRRTHPETPVRLVLAGAGSPEFLNHLRELARTEGVAGDVVLRGSLPRPELARLMGSVDAVAVPSSSETFGLVAVEAQACGTPVLATDVDGLRYAVRDGETGRLVPGRDPAVWAEALHRAAADPSAWRAMSHAATRRARELTWDDVAARHAGAYLACAGAAATA
>LR134409.1|VEH75701.1|2100252_2102199_-|Alanine-racemase
MGGVSEMTSEQNRQPSERSAVVDLAAVRHNVGRLLELARGRTLIAVVKANAYGHGAPQVARAALEAGAHMLGTAHVSEALALRAEGITAPVLAWLHTPSTDFAAAVREDVRLGVSGGELDAVLAAAREAGRPAVVHLKLDSGLGRNGATPEQWPALVRRVREAEGEGLLSVEGIFTHLAVADEPARPETAEQLATLTTAVRTAREAGLSPTMVHAANTPGLLSAADREDPDAILRDAVRVGLGLYGLSPFADRTPEDFGLVPAMTLRTRVANVKDVPAGAGVSYGLTYRTEGPTRLALIPLGYADGVPRVATGAPVRIGNRLHPVVGRIAMDQCVVDLSRSRPVTEAAGKPGAAREPTVRIGDEAVLFGAGSNPSVTDWADAAGTINYEVVTRLSPRVPREHVGLEPQRDSDRSRSVEHGGHPGAEPVDGPGADRDHGAGAGPGGVVPGDGAQDGPGAGAAGENWSITRELASAEETRALAAALAPHLRAGDLVLLNGELGAGKTTFTQGLGAGLGVREGIISPTFVLARRHPNLADGPRPGGPDLVHVDAYRLGSAEDVESIDLEDTLDTCVTVVEWGTSKVEHLSASRLVVDIERARGAQAAPEQADLAGVLAQLGAQWEEDASAGEVRQITLRGVGPRWTEPPRV
>LR134409.1|VEH75700.1|2099155_2099872_-|Purine-nucleoside-phosphorylase-deoD-type
MSPTSTPHINPQGAPIAETILLPGDPLRAKFIAETFLEDAVQFNSVRNMFGYTGTYQGRELSVMGTGMGIPSIALYSWELINVFGCTKLVRIGSCGGLTEGLALNDLVLAQAASTDSNYLAQFDLPGTWAPTGSFRLLDHVYRAAESRGITAHAGNVVSSDTFYHAQDDTTERWAKMGVLAVEMETVGLYANAAAAGVEALAMFTVSDNLATHAQMTPEQRQTGFAQMIELAATVTEL
>LR134409.1|VEH75699.1|2097638_2099150_-|High-copy-suppressor-of-rspA
MNHPDENPDLAQTAGPDSAASTPAAAVPATHAGTAEAPRTAGGVNPRRAVPVLLFLFIFCLVIDQGFKFTSQPMAEALSLSESTVSLQATLTGVLIGIGAVVYSALADSVAIRKLLYLSIGLIVVGSVIGFVGSASFGVVLVGRVVQTAGLAAAETLYVVYVTKHFQGVELKKYLGFSNMSFQLASLIGTLVSGFLATYVSWTWMFLIPLLIVLSLPFIKTRVSDDVEHTSSGVDVYGLFLVGVIATGLIMFMQDFTWWWWIPVVVATVLFVHHVRTNSRALVDASFFTNRPYISALVIVFIIYSVNLAFVFLFPFAIHGVHGMAMDKVSLLTIPGYVLGASTAAMSGAVSKRLDSKQAVTLALCLLALALAVAGVFINVSVVAMVIAMAMFSVGFGLLYAPLMSSALLLMPAAKSGVAVGFYNLVINVASPIGVAYTAMLMSAKPTWFGALSVGGSAEGDYFSTILWFLVGITLVGLVAYRVLFGLIERNNAKAAARLTAQQ
>LR134409.1|VEH75698.1|2096866_2097556_-|UGMP-family-protein
MRVLVLSLDSSSIASVALARDGEVLRESATTDTRSHAEALAPAVRDVLSAEGLTGADLDAVLVGTGPGPFTGLRAGLATARALGFAWGLPVHGLCSLDAAAHRIAPRLAEAGHEEFAVVIDARRKELYWRPYRVLEDTAATAVGLSEPRVGAPEDVPALPSCGPGTALYPQRLAHPVPGTGDLHPTAADLARAAWALTSRGTPLSTDTSPLYLRESDAKVPAFAKRTTA
>LR134409.1|VEH75697.1|2096312_2096870_-|ribosomal-protein-alanine-N-acetyltransferase
MTGPQGSAPGAASAAASSLPRGYALRPMQPRDLDAVHALETVLFPEDAWPRHMFDEELAHPTRAYWVLTRNGEIVAYAGMMCIPPVADVQTIAVAAAHEGRGLGSTLLRVLHEAAVRGGATEMMLEVRADNPRAQALYRRFGYEHIHSRAHYYGPGLHALIMRCALVPPGPQERSADGRTIHEHR
>LR134409.1|VEH75707.1|2108394_2110215_-|Malto-oligosyltrehalose-trehalohydrolase
MSTDHRFDVWAPHARKVTVRIEGEDHPMEGLDGRPGWWTLPADDAAPQGTVRYGYILTKTFDEGTPEEREQVSDVLPDPRSRRQPQGVHDLSCTFDADAFEWHDADFRPRPLQDSVLYELHPGTFTPVGTLDAAIGRLDHLVDLGVTAVELLPVNGFNGEHNWGYDGVAWYTVAEPYGGPEAYQRFVDACHARGLSVIQDVVYNHLGPSGNYLPLFADYFKPGASSWGDLINLDGWGADGVREYILDNVTMWLREYHVDGFRLDAVHALADSSAKHILEEIAERVAEEVQRTGKDLVTIAESDLNDPRMIAATHRHGLGMGAQWLDDVHHAAHTAFTGETQGYYGDFASLHALEKTMHTAYFHNGTYSTFRGRSHGREIDPVEQRPYQFVTFLQNHDQVGNRAAGDRMNQSMSVDRAIAAATWLMAQPFTPMLFMGEEYGASTPWQFFTAHPEPELGEAVAKGRKAEFAQMAWDHATVPDPQDPQTFERSKLNWAEVHEGDHERIYRAYRDLIALRRNTPELTDQRWDTVATQASDSEQWFVLKRMTEPESEHGVVIAINLGREPRNLPLMGGDAPRLLFTSGTGPEPGAEGTVRVAPETAVVLRV
>LR134409.1|VEH75708.1|2110218_2112588_-|Maltooligosyl-trehalose-synthase
MLTPTSTYRLQITSQQDLHRAAELVLYIRRLGADWVYLSPILRATSGSDHGYDVVDPTEVDPERGGSEGLRALSEAAHAAGLGVVVDIVPNHQGVAEPQQNPWWWSLLAEGRESRYADAFDVDWEAGHGKVLIPVLGDGDEDLSALTLQDGTLRYYDSVYPLAEGTWSEGDNPAEVHSRQHYELVNWRRGDSELNYRRFFTVATLAGVRVEDRAVFDESHAEVSRWFRKGLVDGLRIDHPDGVRDPRGYLEMLAGVTDGAWTVVEKILEPGEYLPEDWRTAGTTGYDSLGWIDRVLTDARGHYELASLDTKLRGGTPVRWDELIHETKRRMADEGLSAEIHRLVRELPGDFPHGAEASYDGLAEIAANFPVYRTYLPEGAEHLRVAVAAARERRADLDVVLTDLARVLGQGATRQEDLAEVARRFQQTSGMIMAKGVEDTAFYRWTKLTSLTEVGGDPSIFSLTPEQFHEEAAKRQRECPATMNALTTHDTKRSAAVRARITVLSELPRVWSETVSTLVGRAKDAGISLSDGPAVNLVLQAVVGAWPLERDRAVDYAMKAVREASVSTAWVDGDENFERELTRFIDFLFTNPRARGVVEGCVARVSGPGWANALAATALQLTLPGVPDIYQGQELWEPSLVDPDNRRSVDFTAREAMLTELDAAAPGSAAATPAVDETGAARMLLTSRALRLRRDHPELFTDYTPLETTGALAEHALGFDRGGAATVVTRFPATLAAEGGFTDETVALAPGLWQDVLTHREFTAAQDARVTLAELLDTYPVAILRRKDG
>LR134409.1|VEH75709.1|2112747_2114925_-|Glycogen-debranching-enzyme
MEVWPGHPYPLGATFDGTGTNFAIFSEVADRVELCLFDEDGAETRVEVTAVDSYVWHCYLPAVQPGQRYGYRVHGPWDPSQGLRCNPDKLLLDPYAKAVEGGIDWDESLFSYNFGDEDSENHQDSAAHMMKGVVINPFFDWEGDRTPHTPYHKSVIYEAHVKGLTEQHPEVPEEQRGTYAGVSHPAVIAHLKKLGVTAVELMPVHQFVQDSTLLEKGLRNYWGYNTIAFFAPHNEYSAASHLGSQVQEFKAMVRALHQADIEVILDVVYNHTAEGNHMGPTLSMKGIDNNAYYRTVDDDHKFYMDYTGTGNSLNVRHPHSLQLIMDSLRYWVTEMRVDGFRFDLAATLAREFYDVDKLSTFFELVQQDPIVSQVKLIAEPWDIGPGGYQVGNFPPQWTEWNGKYRDTVRDFWRGEPATLGEFASRVTGSADLYENSGRRPFASVNFVTAHDGFTLRDLVSYNEKHNEANGEDNNDGESHNRSWNCGEEGPTDDAAVLALRARQQRNFLATLMLSQGTPMLLHGDELGRTQKGNNNTYCQDNELTWINWEKVDAPLVEFTAAITRLRHEHPTFRRSQFFDGRPVDMGELGEGDAMPDIAWLNTDGTPMVPSDWDEPLARAVGMWLNGEGIAGVDMRGRRITDDNFIVYFNSNPEPVDVTLPPAEYGLKWEEILDTAGRHSDGDVREHSSVLQMDGKSTVLLRAWEEPEEEPDASVAASVAVYADEG
>LR134409.1|VEH75710.1|2115009_2116956_-|Nicotinamide-nucleotide-repair-protein
MIDARSGESIRRAEQPLLDEGQGDALMHRAARGLTRECEAQLRAGSGALGGTRAVVLVGPGNNGGDGLWAGAFLRRGGVAVVAVLTGSRAHEAGLEAFRRAGGVVTRLVEDAVRGHGPGAAGEQGGAARDAAGASPGNGAGSDGPATDGTGAATHGAGAGGHGSRRTGDRTATADSPAEAVAAAEPVDVAGAAELLWAADLVVDAVLGTGASGGLRGPVADLVREFEERRGRDARAGQRRPRVVACDIVSGVSADTGQSPGPVLTADATVTFGSAKTGHVVSPGEQATGALTVVSIGIEDLLGPAAVHRVEHRDVLEAWPRPTATDTKYSRGVLGVVAGAPSYPGAAIMCTQAAVNAGAGMVRFLGDAAARAMVLTRSPEVVCSDDQPWDVHVQAWLAGPGVVGDESQAARVQAVIEAAEPAVLDAGALDAAARSVADARLGPHKVLTPHAGELSQIFDWLHGFGLCEAGVERTEIEANPLHWAREAARLTGATVLLKGATTVIASPVASAPGHRAEYAAAAPSEPRPDREQGGGADPAASSSTAHREASPSTPDECLCLSVGGASAWLATAGSGDTLAGILGTVLAHVAEHLDALAGLGPWACGDGRWAAAAALGAGLHALASRAHGEGPVPPSVLAENVRAVLTRP
>LR134409.1|VEH75711.1|2116948_2117320_-|Holo-[acyl-carrier-protein]-synthase
MIVGTGVDIVDIARFERQLERTPRLRERLFVPHERELAPRSLAARFAVKEAAAKALLAPPGMIWQDCWVSNDEHGAPHLHTTGTVARQQRARGVDTWHVSISHDGGMAVAFVVAEAQEGSRDD
>LR134409.1|VEH75712.1|2117517_2119401_-|Glucosamine--fructose-6-phosphate-aminotransferase-[isomerizing]
MCGIVGYVGSKGADGRTHTALDVILEGLRRLEYRGYDSAGVAVIADGEVEYRKKAGKLSNLVAELEAHPLPDSTIGIGHTRWATHGGPSDVNAHPHVVDGGKLAMIHNGIIENFSEIKRELVAQGETFVSETDTEVAAVLLARTYNAQDDGHKDLTVAMQDTCRRLEGAFTLLAVHADVPDRVVAARRNSPLVIGLGEGENFLGSDVSGFIDYTKRAVEMGQDQIVTITADDYSIVDFHGSPAEGKPFDIEWDAAAAEKDGYPSFMEKEIHDQPAAVGDTLLGRLDENGRLTLDEIKIDESVLRSIDKIVVIACGTAAYAGQVARYAIEHWCRIPTEVELAHEFRYRDPIVNEKTLVVAVSQSGETMDTLMAVRHAQEQGAKVVAICNTNGSTIPREADAVLYTHAGPEIAVASTKAFLAQITAAYLLGLYLAQLRGNKYQDEIGGILSELEAMPAKIQRVLDEVEPQVKELATSMEDAESVLFLGRHVGYPVAMEGALKLKEIAYIHAEGFAAGELKHGPIALIDQGQPVIVIVPSPRGRDSLHAKVVSNIQEIRARGAETIVIAEEGDDAVREFATHVFHVPEAPTLLQPLLATVPLQIFACELAGAKGYDVDQPRNLAKSVTVE
>LR134409.1|VEH75713.1|2119474_2120431_+|Pantothenate-kinase
MSTQPTTQRVSPFVELDRQTWSRLSHEIDVPLTAQEIENLRGLGDRLDVDEVREVYLPLSRLLTLYDMSSTQLNAATNSFLGEHHARTPFVIGIAGSVAAGKSTTARLLREMLSRWPSTPNVQLVTTDGFLHPNAELRRRGLMDRKGFPESYDRRALLRFVAEIKSGAAEVRAPKYSHVTYDILPDEEVVVTRPDVVIVEGLNVLAPAKLESGNRTALALSDFFDFSIYVDARTADIERWYVERFQALRSSAFADPHSYFHRYANLTDTEARDVATDIWHRINEPNLEQNVRPTRGRARLILSKDHDHKIRRVLLRKN
>LR134409.1|VEH75714.1|2120508_2120973_+|Large-conductance-mechanosensitive-channel
MIVRLCTVSAMLSGFKEFIMKGNVMDLAVAVIIGAAFSKIVNALVESVLMPAISAVVGSPNFDTFAVVTLRGNELKFGVLLTAVVNFLLIAAAVYFCIVLPMNKMIERRNRRMGIEPTAEPADPNTVLLTEIRDALAGNPAAPGAEGRHSGPAV
>LR134409.1|VEH75715.1|2121041_2122397_-|Phosphoglucosamine-mutase
MSRIFGTDGVRGLANGLLTAELAMELSQAAAIVLGHRHAPEGQRPTAVVARDGRASGEFIGAAVTAGLASSGVDVYDAGVLPTPAAAYLVGDIDADFGVMISASHNPAPDNGIKFLAHGGKKLPDAVEDTIQQVYEAKDFVRPTGAEVGRVTRLSDAEDRYILHLVGAIPHRLDGLSIVLDCANGAASGASPDAFRDAGATVHVIGAEPDGLNINDGVGSTHLGPLKQAVRELGADLGIAHDGDADRCLAVDHTGTEVDGDQIMCILAVAMKEAGRLNQDTLVATVMSNLGLQLALDEAGITLVRASVGDRYVLESMVANGYNLGGEQSGHVIMADYATTGDGLLTGLMLASRVAQTGMPLQELARTMTRMPQVMINVKNVDKAAAKTSEPVLEAVARTEERLGAEGRVLLRPSGTEPVVRVMVEAATHEDARREAEQLVSAVEEHLSLQS
>LR134409.1|VEH75716.1|2122445_2123486_-|polyphosphate-kinase-2
MSKQPDQQQENAIIAKAEDEAAQHARQDSAVDEALKKEQHRVSVVEDYAAELDEIGELDRKLHKKRGAEDSQAWKIGYPYDEKLSRKDYERTKRALQIELLKLQLWIKETGQKLLIIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPTDIEQTQWYFQRYVQHLPSGGEIVLMDRSWYNRAGVERVMGYCTSQQYYEFMRQAPEFERMLVNSDTHLIKFWFSVTRAEQLARFQSRRTDPVRQWKLSPTDVASLDKWDDYTEAKEAMFFYTDTGDAPWTVIKSNDKKRARLEAMRYVLTQFDYPNKDHSLVGSVDSKIVGGATDFTDDNGANPDGFPVVRPGKD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2081897 : 2091314

uncultured_virus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEH75686.1\|2081897_2083421_-	Inosine-5'-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.3e-94	40.0
VEH75687.1\|2083545_2085648_-	O-acetyltransferase OatA	A0A1R3Y5Q6	Salmonella_virus	1.4e-30	27.3
VEH75688.1\|2086001_2087588_-	chaperonin GroEL	A0A219YK78	uncultured_virus	2.8e-148	52.1
VEH75689.1\|2087698_2087995_-	co-chaperonin GroES	A0A221S4M3	uncultured_virus	1.5e-18	46.3
VEH75690.1\|2088404_2089160_-	Iron(3+)-hydroxamate import ATP-binding protein FhuC	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-11	27.5
VEH75691.1\|2089156_2090317_-	Iron-uptake system permease protein FeuC	NA	NA	NA	NA
VEH75692.1\|2090309_2091314_-	Iron-uptake system permease protein FeuB	A0A2H4IY97	uncultured_Caudovirales_phage	4.1e-60	38.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage