CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134491	Streptococcus mutans strain NCTC10920 genome assembly, chromosome: 1	4 crisprs	DEDDh,csa3,cas3,WYL,DinG,csm6,csn2,cas2,cas1,cas9,cas6e,cas5,cas7,cse2gr11,cas8e	0	26	7	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: LR134491_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134491_2

1205092-1205258

Orphan

Consensus_repeat	Method
CGTCAGTCTCCTATTTTCTTCTCGCTTTCTTCACGCCCTTTGTATCTTAAATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134491_2

>merge|LR134491|2|1205092-1205258|CRISPRCasFinder
CGTCAGTCTCCTATTTTCTTCTCGCTTTCTTCACGCCCTTTGTATCTTAAATAATTGAACACGGGCTAAAAGCGTCGAGAAAAAGATAGCCTGCCTTATGCGCCAGCGCACAGCGTCAGGCTCCTATTTTCTTCTCGCTTTCTTCACGCCCTTTGTATCTTAAATAA

>LR134491|2|1|1205092-1205258|CRISPRCasFinder
CGTCAGTCTCCTATTTTCTTCTCGCTTTCTTCACGCCCTTTGTATCTTAAATAA	TTGAACACGGGCTAAAAGCGTCGAGAAAAAGATAGCCTGCCTTATGCGCCAGCGCACAG
CGTCAGGCTCCTATTTTCTTCTCGCTTTCTTCACGCCCTTTGTATCTTAAATAA

Protein	Signature genes	Signature genes Name	Protein_function
LR134491.1\|VEI60243.1\|1213769_1214618_-\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|369792
LR134491.1\|VEI60233.1\|1204104_1204680_-\|Thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
LR134491.1\|VEI60228.1\|1199305_1200283_-\|Pseudouridylate-synthases,-23S-RNA-specific	unknown	unknown	gnl\|CDD\|377262
LR134491.1\|VEI60235.1\|1205545_1206481_+\|putative-thiamine-biosynthesis-lipoprotein	unknown	unknown	gnl\|CDD\|224394
LR134491.1\|VEI60226.1\|1196947_1198681_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
LR134491.1\|VEI60232.1\|1202964_1204077_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
LR134491.1\|VEI60242.1\|1213064_1213523_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|275265
LR134491.1\|VEI60241.1\|1212342_1213068_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
LR134491.1\|VEI60225.1\|1195217_1196951_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
LR134491.1\|VEI60240.1\|1210825_1212346_-\|choline-ABC-transporter,-osmoprotectant-binding-protein	unknown	unknown	gnl\|CDD\|270328
LR134491.1\|VEI60231.1\|1202134_1202965_-\|putative-protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|236467
LR134491.1\|VEI60224.1\|1193384_1195100_+\|putative-phosphoglucomutase	unknown	unknown	gnl\|CDD\|100092
LR134491.1\|VEI60237.1\|1207130_1208375_+\|reductase	unknown	unknown	gnl\|CDD\|225301
LR134491.1\|VEI60227.1\|1198698_1199304_-\|transposon-like-protein	unknown	unknown	gnl\|CDD\|372680
LR134491.1\|VEI60234.1\|1205270_1205456_+\|4-oxalocrotonate-tautomerase	unknown	unknown	gnl\|CDD\|179406
LR134491.1\|VEI60229.1\|1200279_1201542_-\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
LR134491.1\|VEI60236.1\|1206506_1207109_+\|reductase	unknown	unknown	gnl\|CDD\|223508
LR134491.1\|VEI60230.1\|1201551_1202142_-\|putative-tranlsation-factor	unknown	unknown	gnl\|CDD\|223088
LR134491.1\|VEI60239.1\|1210072_1210732_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
LR134491.1\|VEI60238.1\|1208552_1210058_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650

Protein	Function_ID	Function_description	E-value
LR134491.1\|VEI60243.1\|1213769_1214618_-\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	6.3108e-60
LR134491.1\|VEI60233.1\|1204104_1204680_-\|Thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	2.06207e-108
LR134491.1\|VEI60228.1\|1199305_1200283_-\|Pseudouridylate-synthases,-23S-RNA-specific	gnl\|CDD\|377262	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein.	9.48566e-28
LR134491.1\|VEI60235.1\|1205545_1206481_+\|putative-thiamine-biosynthesis-lipoprotein	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.1235e-101
LR134491.1\|VEI60226.1\|1196947_1198681_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.97246e-125
LR134491.1\|VEI60232.1\|1202964_1204077_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
LR134491.1\|VEI60242.1\|1213064_1213523_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|275265	TIGR04472, reg_rSAM_mob, mobile rSAM pair MarR family regulator. A number of human microbiome species from both the Firmicutes and the spirochete genus Treponema share a gene cassette encoding a pair of radical SAM enzymes and, in most cases, this MarR family transcriptional regulator as well. Sequence identity can exceed 96 percent, suggesting recent lateral transfer. These observations suggest the cassette confers resistance to a toxic compound such as an antibiotic.	6.46186e-32
LR134491.1\|VEI60241.1\|1212342_1213068_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	8.22503e-137
LR134491.1\|VEI60225.1\|1195217_1196951_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.06878e-164
LR134491.1\|VEI60240.1\|1210825_1212346_-\|choline-ABC-transporter,-osmoprotectant-binding-protein	gnl\|CDD\|270328	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ChoS of Lactococcus lactis is predicted to be involved in uptake of compatible solutes such as choline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ChoS belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.3131e-159
LR134491.1\|VEI60231.1\|1202134_1202965_-\|putative-protoporphyrinogen-oxidase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.83784e-101
LR134491.1\|VEI60224.1\|1193384_1195100_+\|putative-phosphoglucomutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
LR134491.1\|VEI60237.1\|1207130_1208375_+\|reductase	gnl\|CDD\|225301	COG2461, COG2461, Uncharacterized conserved protein [Function unknown].	4.44363e-56
LR134491.1\|VEI60227.1\|1198698_1199304_-\|transposon-like-protein	gnl\|CDD\|372680	pfam13702, Lysozyme_like, Lysozyme-like.	2.70566e-74
LR134491.1\|VEI60234.1\|1205270_1205456_+\|4-oxalocrotonate-tautomerase	gnl\|CDD\|179406	PRK02289, PRK02289, 4-oxalocrotonate tautomerase; Provisional.	1.04724e-34
LR134491.1\|VEI60229.1\|1200279_1201542_-\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
LR134491.1\|VEI60236.1\|1206506_1207109_+\|reductase	gnl\|CDD\|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	1.24172e-45
LR134491.1\|VEI60230.1\|1201551_1202142_-\|putative-tranlsation-factor	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	1.83887e-59
LR134491.1\|VEI60239.1\|1210072_1210732_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	8.53357e-79
LR134491.1\|VEI60238.1\|1208552_1210058_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.27793e-11

>LR134491.1|VEI60233.1|1204104_1204680_-|Thymidine-kinase
MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSSLDTRDEFGVISSRIGMRRKAIPITDDMDIFAYINSFKDKPYCVLIDECQFLSKKNVYDLARIVDELGVPVMAFGLKNDFQNHLFEGSRELLLMADKIEEIKTICQFCSKKATMVLRTQDGKPVYEGEQIQIGGNETYIPVCRKHYFHPLIKD
>LR134491.1|VEI60232.1|1202964_1204077_-|peptide-chain-release-factor-1
MYKFKERLNGKMNIYDQLQTVEDRYEELGELLSDPDVVSDTKRFMELSREEASTREMVTAYREYKQIIQNIADAEEMIKEAGGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAESQGWKFEIMEASMNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVIDALVLYDQTQKLEKLGK
>LR134491.1|VEI60231.1|1202134_1202965_-|putative-protoporphyrinogen-oxidase
MNYAQAFAQYEAVLAANGVEKAALTYVFNDWKDWSRLDFILHQSHEIPEADLRQLDRITKLLKQHIPAQYITKKAYFADLTLTVDERVLIPRPETEELVNLILEENPDESLTVLDIGTGSGAIAIALAKTRKNWQISASDISKKALLLAQDNARANQTAVNFLHSDVFSQISDKYDIIVSNPPYIAFEDRNEVGQNVLLHEPHLALFADNEGLSVYQKIAEGAAEHLTAGGRIYLEIGYKQGASVSEIFRNYFSDKRIRLLQDSFGKDRMVVIDDG
>LR134491.1|VEI60230.1|1201551_1202142_-|putative-tranlsation-factor
MDKIEEALLAGQAVILPTETVYGLFARAMDARAVSNVYALKKRPPEKAMNLNVSSLEEILAFSKEPPAYLEALYKAFLPGPLTIILKANERVPVWVNSGLPTVGFRVPRHPLTLAYIKKTGPLIGPSANLSGQASGLVYEEIQSAFSHQLLGVQDDKAIKGKDSTILDISGPKAKILRQGTIAQAAIQARVKDIKF
>LR134491.1|VEI60229.1|1200279_1201542_-|serine-hydroxymethyltransferase
MIFDKDNYETYDAEVWEAIHAEEKRQQNNIELIASENVVSQAVMKAQGSILTNKYAEGYPGRRYYGGTECVDMVESLAIERAKKLFGAKFANVQPHSGSQANAAAYMALIVPGDTVMGLDLAAGGHLTHGSPVSFSGQTYNFVAYNVDPETELLDYDQILEQAKEVQPKLIVAGASAYSRVIDFAKFRNIADQVGAKLMVDMAHIAGLVAAGLHPSPLPYAHITTSTTHKTLRGPRGGLVLTNDEDLAKKINSAIFPGLQGGPLEHIVAAKAITFKENMDPAFKVYAQNILDNCQAMVEVFNAHEKFRVVSGASENHLFLVDVTQVVENGKVAQNILDDVHITLNKNSIPFEKLSPFKTSGIRIGTAAVTARGFGPEECRKVAELIVKTLENTDNEAVLEEVRQEVKVLTDAFPLYENLV
>LR134491.1|VEI60228.1|1199305_1200283_-|Pseudouridylate-synthases,-23S-RNA-specific
MMDLYLKKAVIHQFTPDDTELIFSDKLLTITPKLDEYFRKKVSRVFSDEAKRGKFDEDNVFLSYLSKDFLESSKKVAQLWKEEFVISDNQKTNDLIFIQFDKEGIEHFAFLRIALKESLAHITDGSDSPIRLTQNNLPSAAQTPDEALIINRQNRQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKLMEKTAQKVADNFNQDDFAFQSKMKSAIYKNLEEDQELSPEKLADQLFDANLTARLTFVDELKETISEPIKVADIDHTRQIKKLESQKLSLSNGIELLVPNNVYQDAESVEFIQNQDGTYSILIKNIEDIQSK
>LR134491.1|VEI60227.1|1198698_1199304_-|transposon-like-protein
MKKKLVKVILLGLLLFIGYQVFTTYQNVKNVLAYRPMVREILDENDTRTNENLVLAMIYTETKGQEDDLMQSSESSSGIANTITDSRESVRQGVMVLSENLEEAKKKKTDAWTAVQAYNFGKNYIAYISKNGGKSTIKLAKHYSKTVVAPSLGNKSGQTYRYYNLVALFYGGGELYKDGGNIYYAKQVKLNLALIRFVSAF
>LR134491.1|VEI60226.1|1196947_1198681_-|ABC-transporter-ATP-binding-protein
MKHLFIYFKGYLKETILGPLFKLLEASLELLVPLVIARMVDSYIPHNDKNHLYLMIFFLVLLAFSNIIVAIIAQFYSAKAAVGYTKQLSRSLFEKIMRLPKKSRDELTTSSLVTRLVSDTFQIQTGINQFLRLFLRAPIIVFGSVLMAFLINPRITIWFFLMVFVLFALVYLMSIVVNPLYDRIRHLTDKIVGLTREQLEGSRVIRAFGQIQAEEQQFQQTNRAYTDWQIKTGYIAALITPLTYLAVNVTLIIVIWQGHIAIWSNDLSQGMLIALVNYLLQILVELLKLTMLVSSLNQSFISAQRIAQVFEQEDEDIRAFLPVDSASDDILVKVNEMSFSYPQAAKAALKDISFTIHKQEFFGIIGGTGSGKSSLIQLLLRLYLPQQGQVTVFNSGSSARTIKEWRDWISLVPQRAELFKGTVRSNLTLGLDKKPTDEELWKALDMAQASDFVRQKTGQLDAQVEAFGRNFSGGQRQRLTIARALLRDRPLLILDDATSALDYLTEARLLSAIEKNLRKTSLIMVSQRTNSLAKADRILVLDQGKQVALASHKKLLEICPLYQEIHYSQHAKEEGIQ
>LR134491.1|VEI60225.1|1195217_1196951_-|ABC-transporter-ATP-binding-protein
MKARNNRDTLKRLTADMLQQKLLVGGALLGTFIQVGLTVYLPVLIGRAVDAVVAKNVHELLPIILGKMILVVAFNTLIQWFNPLIYNRLVFAYSQKLRQELIEKLYRLPLSYLDSHSAGDLVSRMTTDVEQLSNGLLMVFNQFFVGILTILFTILTMAELDLLMMVLVLALTPLSLFVARFIAQKSYRLYQSQARARGSFTQHIEESLRQESLIQTFNAQEQFIDTFDHLNNTYARYSQGAIFYSSTVNPATRFINALIYALLAGIGALRIISGSFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACAERLYMILDEEEARDEGRQELESRSVKGAITFDNISFGYSSRQTLIKNLSLTIPQGSKVAIVGPTGAGKSTLINLLMRFYELQSGQILLDGVPITAYSKASYRQQIGMVLQETWLKTATVLENIAFGWPQASREQVIAAAKAANADFFIKQLPQGYDTYLADAGESLSQGQRQLLTIARIFVHIPKILILDEATSSIDTRTEILIQEAFEKLMKNRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHKDLMQKKGVYYQMQTAQN
>LR134491.1|VEI60224.1|1193384_1195100_+|putative-phosphoglucomutase
MTYQETYQKWLDYTELPAYLREELSVMDEKTKEDAFYTNLEFGTAGMRGYIGAGTNRINIYVVRQATEGLAKLIETKGEDVKKRGVAIAYDSRHFSPEFAFESAQVLAKHGIKAYVFESLRPTPELSFAVRHLGTFAGIMVTASHNPAPFNGYKVYGEDGGQMPPADADALTDFIRAIEEPFAIELADLEESKASGLIEVIGEAVDAEYLKEVKDVNINQKLIDEYGKDMKIVYTPLHGTGEMLARRALAQAGFDSVQVVEAQAVPDPDFSTVKSPNPENQEAFALAEELGRKVDADVLVATDPDADRLGVEIRQPDGSYKNLSGNQIGAIIAKYILEAHKTAGTLPANAALCKSIVSTELVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMLGFEESFGYLIKPFVRDKDAIQAVLIVAEIAAYYRSRGLTLADGIDEIYKEYGYFAEKTISVTLSGVDGAAEIKKIMDKFRDNGPKQFNSTDIAKTEDFQAQTATTAAGVEKLTTPPSNVLKYTLADDSWIAVRPSGTEPKIKFYIATVGSSLADAENKIAAIEKEINDFVG
>LR134491.1|VEI60234.1|1205270_1205456_+|4-oxalocrotonate-tautomerase
MPFVKIDLFEGRTKEQKIELAREVTEVVSRVAKAPKEAIHVFINDMPEGTYYPHGEMKKKG
>LR134491.1|VEI60235.1|1205545_1206481_+|putative-thiamine-biosynthesis-lipoprotein
MQAQQTLHLMGTTIDIAVEASYAKELTESACQLLNIYEHRFSANSDDSELMAVNHQAGRRAVAVHPDLFELIQIGKEHSIANPSNLNIAIGPLVQTWRIGFEDAQLPNQAQIDDKLKLIDPHNIILNAQKQTVFLSQKGMKIDLGALAKGYIADKIIAYLKKQGATSAMINLGGNLLAFGPNPKRPGGFWNIGIQDPKRPRNQNVGIVKIYNQSVVTSGIYERHLQINGKDYHHIFDKNTGYPIETQMASLSIISNLSLDGEIWTTRLFGLPIPLAMKTINQMEHIEGIIITRDNRLAVSDGLKNTFIPLY
>LR134491.1|VEI60236.1|1206506_1207109_+|reductase
MKLIGLVGTNSKKSTNRQLLQYMQKHFADKADIELVEIKDLPMFNKPADKKLPEQVTEIAAKIEAADGVIIGTPEYDHSVPAALMSALAWLSYGIYPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPEIKANVLPDEFLLSHSLQAFDNEGNLADLETCQKLDAIFDDFRIFVKITEKLSSAQELLHKEAENFDWESL
>LR134491.1|VEI60237.1|1207130_1208375_+|reductase
MKFVGLVGSNAEQSYNRKLLEYIRKQFKLKFELEVLEIDDVPMFNQDQDWKESFQLRLLYNKITRADGVIIATPEHNHTITAALKSVLEWLSCEVHPFENKPVMIVGASYYDQGTSRAQVHLRKILDAPGVNAYTLPGNEFLLGKAKEAFDDDGNIINKGTVEFLGTCLDNFVSYVGVVSKLQKPKPIEPEDLDCNHPIATSVREVDPDDPEWVEKVAEVTGAVSGDTYVKLDHGILTVDQINMFLKAMPFELTYSDDNNQFLYYNNAHQDPDTMFAKRVPSQSGSRLSTVHNSLPPERMKNVEWVIGTLRNGNQEYVRTLIPNPNPAVLNTHNYQAMYYDDGSFAGINEIVFNFKPWLDWYLQTTGQRLVGGVGSDTTSGASDSSADATSGASDSASGHSAGAADATSGASEH
>LR134491.1|VEI60238.1|1208552_1210058_+|ABC-transporter-permease
MNFIKRAWLLTKAKKGRTALLTLVISSILIFVLAGLTIKSAADKAVENAKKETGATVNLQINRDYIMKKAQQASSSNTSSNQPPKFEMTPISLSVAQTIAKMTGVKSYLYTTTTTATAGNITPISTQSNSSDSSSSDNAFGRGESNGQNNKMTSGDFTITGVNRTDSVSEFSSSTNKIIKGKGITSQTSNNEAVIESDLAKANNLSVGDNFTVKVTNDSGSEKTYTLKVIGIYKSKTSVTSSQLQNNASNPSNNLYVNLQTANTMKGQTNTVDAATYTLSDPASVKSFVKKAKSKIDTDKFTVESNDKLYQQMLTPLNNVSSFSKNIVILVAVAGAVILTLIIILSIRERRYEIGVLMSLGENRLKIIGQFFTELFLVTLVSLALAAIAGNFVGNAVGNQLLSQQTSSSQQNRQMGAGGPERDSSSTDSKKTGQNQAPFAGGPGAAMNRTTINQINKLNVKQTPQSIAKLGLIALLITFISTILASIGLIRMKPKDILSSN
>LR134491.1|VEI60239.1|1210072_1210732_+|ABC-transporter-ATP-binding-protein
MTLKTNNLSYWYSNNPDDYLFRKVNLEFEKGKVYAILGQSGSGKTTFLSLLAGLDSPKEGEILLDNQNINQSGLNDYRRNAVSTIFQSYNLLPYMTARQNVETALDISGIKLSDDEVTNLFNSVGISETLIDKPVLQLSGGQQQRVAIVRALAVKHDIIIADEPTGNLDEETTKDIVAIFKNIAHEQNKIVIIVTHEREVATSSDIIFELARKQFTLKQ
>LR134491.1|VEI60240.1|1210825_1212346_-|choline-ABC-transporter,-osmoprotectant-binding-protein
MTDLITTFQDRFGDWTQSLLEHLQISLLSLLLAIILALPLAIVISHRKRLSEIILQISGIFQTIPSLALLGLFIPFMGIGTVPAVAALVIYALFPILQNTITGLTTIDPSLVEAGQAFGMTKWERLKKFELPLAMPVMISGVRTAAVMIIGTATLAALIGAGGLGSFILLGIDRNNSSLILIGAISSALLAIVFNLAIKFLEKASLKKIMFAFLAMLAGLGVSYLPNIIKASQNQEEIVIAGKMGPEPEILINMYKELIERDSSLSVKVKPNFGKTTFLYEALKKGDIDIYPEFTGTVTASLLKNPPKASNNPQKVYKEARDGILKQDELVYLKPMKYQNTYAVAAKKSFAKENGLKTISDLKKVENTAKAGFTLEFNDREDGNKGLKSLYGLNLQVSTMEPALRYQAIKSGDIDITDAYSTDSEIKEYDLVTLKDDKALFPPYQGAPLLKKKLLQKHPELKRILNRLAGKISESQMSDMNYQVKVKGKSAKTVAHNYLKKAGLLK
>LR134491.1|VEI60241.1|1212342_1213068_-|ABC-transporter-ATP-binding-protein
MIRFKNVSKSYGQEKVLDALDFEVAKGEFFVLIGPSGSGKTTTLKMINRLIEPSQGKIFLNQQAITDLSLRELRLSTGYVLQQIALFPNLTVRENIELIPEMKGWSKAKRLKKTKDLLGKVGLDADKYLERYPRDLSGGEQQRVGILRAIIADPSILLMDEPFSALDPISRKQLQDLTLSLQKELGITVVFVTHDIDEAKKLADRVAVFQKGKIVQLASPKEVEESPANAFVADLFGGDRQ
>LR134491.1|VEI60242.1|1213064_1213523_-|MarR-family-transcriptional-regulator
MTKLARGGYLISHINLLNGRLFNKLLAEEEGAVYSGEQGKILSCLWIAEPLTATDIAIKTGLANNTLTKMLQRLETQGLIVSSSHPKDKRKRCYYLTELGKSQEAVGEKVSQALGEIFYKDFSQKEIQQFEKMLTKVMQNLEAASPRWKEKL
>LR134491.1|VEI60243.1|1213769_1214618_-|haloacid-dehalogenase-like-hydrolase
MSKKIIFLDVDGTLVDYNNRIPQSAIRAIRKARQNGHLVFVSTGRSRAEMQPELWDIGLDGMIGGNGSYVEHDGQVIMHQLISPEDAKAAVDWLYERGLEFYLESNNGLFASEHFRERARETLKIYAMCKGKTSAEVEDQEVDDVMHGLVYGANLYRDDLNKISFVLDSYQDYLDAQKAFPDLKVGTWGGRGEAALFGDLGVKNITKAHAIDALLQHLKADRKDTIAFGDAKVDIPMLEYCEIGVSMGNGGPEILAMADMVTDDVEEDGLFNAFEKLGLLAH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: LR134491_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134491_3

1380941-1381704

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CRT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	PILER-CR

11 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LR134491_3

>merge|LR134491|3|1380941-1381704|CRISPRCasFinder,CRT,PILER-CR
ATTTTGGAACCATTCGAAACAACACAGCTCTAAAACTATCCCCACGGGTAAGATCATCAGGTTGTAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCAGCCTTTGGCACAATTGCAACAGCTATTGTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGCGCCAAAAGCCGATAAGCCAGTAATTGAAGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCAGCCTTTGGCACAATTGCAACAGCTATTGTGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACAAAGACATTCAAACTGCTATCCGCTTGTTAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACGGCAAGCCTTGAAAACTATCTTTTGTATCAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCCAGTAGCTATCCTTGATGATATAGTGCACGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACACATAGTTGCCTGTTAGGTCAAAAGCAATAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCCAAAAACGTCGATAAATGTATCAAAATCAGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACATCTTTTTAAAACTATTTTCAATGCCAGGGGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCGCATAGATAGCAGCGTTAGCGTTTTGATGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

>LR134491|3|2|1380941-1381704|CRISPRCasFinder
ATTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TATCCCCACGGGTAAGATCATCAGGTTGTA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGCCTTTGGCACAATTGCAACAGCTATTGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GCGCCAAAAGCCGATAAGCCAGTAATTGAAG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGCCTTTGGCACAATTGCAACAGCTATTGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAAGACATTCAAACTGCTATCCGCTTGTTA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GGCAAGCCTTGAAAACTATCTTTTGTATCA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CCAGTAGCTATCCTTGATGATATAGTGCAC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACATAGTTGCCTGTTAGGTCAAAAGCAATA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CCAAAAACGTCGATAAATGTATCAAAATCA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATCTTTTTAAAACTATTTTCAATGCCAGGG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CGCATAGATAGCAGCGTTAGCGTTTTGAT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

>LR134491|3|2|1380941-1381704|CRT
ATTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	TATCCCCACGGGTAAGATCATCAGGTTGTA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGCCTTTGGCACAATTGCAACAGCTATTGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GCGCCAAAAGCCGATAAGCCAGTAATTGAAG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGCCTTTGGCACAATTGCAACAGCTATTGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAAGACATTCAAACTGCTATCCGCTTGTTA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GGCAAGCCTTGAAAACTATCTTTTGTATCA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CCAGTAGCTATCCTTGATGATATAGTGCAC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACATAGTTGCCTGTTAGGTCAAAAGCAATA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CCAAAAACGTCGATAAATGTATCAAAATCA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATCTTTTTAAAACTATTTTCAATGCCAGGG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CGCATAGATAGCAGCGTTAGCGTTTTGAT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

>LR134491|3|1|1381141-1381704|PILER-CR
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CAGCCTTTGGCACAATTGCAACAGCTATTGT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	AAAGACATTCAAACTGCTATCCGCTTGTTA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	GGCAAGCCTTGAAAACTATCTTTTGTATCA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CCAGTAGCTATCCTTGATGATATAGTGCAC
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ACATAGTTGCCTGTTAGGTCAAAAGCAATA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CCAAAAACGTCGATAAATGTATCAAAATCA
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	ATCTTTTTAAAACTATTTTCAATGCCAGGG
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC	CGCATAGATAGCAGCGTTAGCGTTTTGAT
GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134491.1\|VEI60397.1\|1379815_1380709_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|119397
LR134491.1\|VEI60401.1\|1383196_1383541_-\|CRISPR-associated-protein-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LR134491.1\|VEI60393.1\|1374583_1375060_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|366181
LR134491.1\|VEI60403.1\|1384406_1388519_-\|CRISPR-associated-protein-csn1	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LR134491.1\|VEI60402.1\|1383537_1384407_-\|CRISPR-associated-protein-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LR134491.1\|VEI60398.1\|1381859_1382237_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family	unknown	unknown	gnl\|CDD\|374224
LR134491.1\|VEI60392.1\|1373890_1374502_-\|putative-lipoprotein	unknown	unknown	unknown
LR134491.1\|VEI60405.1\|1390475_1391033_-\|flavin-reductase	unknown	unknown	gnl\|CDD\|377026
LR134491.1\|VEI60394.1\|1375085_1376924_-\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
LR134491.1\|VEI60400.1\|1382544_1383207_-\|CRISPR-associated-protein-csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
LR134491.1\|VEI60388.1\|1370167_1370560_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
LR134491.1\|VEI60406.1\|1391156_1393688_-\|ABC-transporter-membrane-protein-subunit-and-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
LR134491.1\|VEI60391.1\|1373168_1373837_+\|membrane-protein	unknown	unknown	unknown
LR134491.1\|VEI60390.1\|1371871_1373044_-\|suB1079-undefined-product-1051177:1052352-reverse-MW:44904	unknown	unknown	gnl\|CDD\|371412
LR134491.1\|VEI60407.1\|1394032_1394671_-\|Integral-membrane-protein	unknown	unknown	gnl\|CDD\|226884
LR134491.1\|VEI60404.1\|1388839_1390042_-\|transposase	unknown	unknown	gnl\|CDD\|376564
LR134491.1\|VEI60395.1\|1377275_1379063_-\|Glucan-binding-protein-C	unknown	unknown	gnl\|CDD\|369832
LR134491.1\|VEI60399.1\|1382239_1382446_-\|toxin-antitoxin-system,-HicA-family-protein	unknown	unknown	gnl\|CDD\|377942
LR134491.1\|VEI60389.1\|1370601_1371645_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176247
LR134491.1\|VEI60396.1\|1379227_1379491_-\|putative-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775

Protein	Function_ID	Function_description	E-value
LR134491.1\|VEI60397.1\|1379815_1380709_+\|transcriptional-regulator	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	1.0936e-22
LR134491.1\|VEI60401.1\|1383196_1383541_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.45221e-48
LR134491.1\|VEI60393.1\|1374583_1375060_-\|acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.95173e-17
LR134491.1\|VEI60403.1\|1384406_1388519_-\|CRISPR-associated-protein-csn1	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LR134491.1\|VEI60402.1\|1383537_1384407_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.32563e-128
LR134491.1\|VEI60398.1\|1381859_1382237_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	6.27905e-18
LR134491.1\|VEI60394.1\|1375085_1376924_-\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LR134491.1\|VEI60400.1\|1382544_1383207_-\|CRISPR-associated-protein-csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.63741e-115
LR134491.1\|VEI60395.1\|1377275_1379063_-\|Glucan-binding-protein-C	gnl\|CDD\|369832	pfam08363, GbpC, Glucan-binding protein C. This domain is found in the Streptococcus Glucan-binding protein C (GbpC) and also in surface protein antigen (Spa)-family proteins which show sequence similarity to GbpC.	1.48192e-84
LR134491.1\|VEI60388.1\|1370167_1370560_-\|transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.10648e-48
LR134491.1\|VEI60406.1\|1391156_1393688_-\|ABC-transporter-membrane-protein-subunit-and-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.1365e-104
LR134491.1\|VEI60405.1\|1390475_1391033_-\|flavin-reductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	2.47877e-23
LR134491.1\|VEI60389.1\|1370601_1371645_-\|alcohol-dehydrogenase	gnl\|CDD\|176247	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	3.39167e-180
LR134491.1\|VEI60407.1\|1394032_1394671_-\|Integral-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.67763e-55
LR134491.1\|VEI60404.1\|1388839_1390042_-\|transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.04726e-33
LR134491.1\|VEI60399.1\|1382239_1382446_-\|toxin-antitoxin-system,-HicA-family-protein	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.2281e-15
LR134491.1\|VEI60390.1\|1371871_1373044_-\|suB1079-undefined-product-1051177:1052352-reverse-MW:44904	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	5.96308e-77
LR134491.1\|VEI60396.1\|1379227_1379491_-\|putative-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	5.6022e-08

>LR134491.1|VEI60397.1|1379815_1380709_+|transcriptional-regulator
MGRGKLTPQDLEDMKVISSNIQRLLTESGMNQSQLASVLNIPKSSLNEYVKGRTLPKAGNIQKIADYFGLQKSDIDPRFSKSSSSSVLEQISYMARQLNSPRQQKLLDFGKQLLADQKQATGLAAQKHLADSQSSSAAGGAKYQEIVDKFITDEIKHQDNIHLDNIKKAKDLYQALGHSYKSIVLYGEVSAGTGVWVGHEKQETIKYPAPIPKHDIALRVNGNSMEPLFYNGEVIFVKKTQEIYHGQFIVVIVNNEAYLKKLYKKDHEIRLISINPHYDDIILQEDDDIEIIGTVIS
>LR134491.1|VEI60396.1|1379227_1379491_-|putative-transcriptional-regulator
MKGDVTVEKLTLRALRVNYSLSPKEVADCLGIEQQTLLKYEEDSSDIPIHLANALADYYGINLDSVFLGPESDLKQKFKESKLKNIT
>LR134491.1|VEI60395.1|1377275_1379063_-|Glucan-binding-protein-C
MKSKTARITLLSGLALAAFGTTNVLAEDAAASQAPSTTANTNVNSNAAETAPADASQQAQSPSVTVTKTETVGNTTVTTSDVTSQELEDAKAAAQNANLNVTETPAVKQPSVAAADADNKAQAQKINQAVADYDKAKTQYAQDQKQYQQDLADYNTQKSEYDAKKKAYDDYQQQVASGQGAGRVEKAQGLIFESEPKATVTIQGVTDYLDKAARAAHQADDILEQFNTDKYTDSEFTLNNPYDPNEDTWFKMAVGDTIAVTYENIVNSSYNKQKISKVVTTYKLNSSTNKDGTAIVELFHDPTKTIFIGAQTSNTGRNDKISVTMQITFFDENGKAIDLSDNRSIMSLSSLNHWTADYGDHVEKVELGNNEFIQIPGSSISLHGNEIYSINDNQYKKNGATFDGDGDDGWDAVNADGDPRSATAYYGAGAMTYKGEPFTFTVGGNDQGLPTSIWFATNSTVAVPENPGEEPKKPSEPNLEKPTVTWHKNFVVESKQEDVPPVIPPETPEKPVTPQTTPPTRPNTPTPDAPKSSVPNKPTSFRPARKDEVRVREREYQPSLPQTGDDNQTAMFALGLVSTAFAAATAIAAHRRKDQ
>LR134491.1|VEI60394.1|1375085_1376924_-|GTP-binding-protein-LepA
MDTEKLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEIEDVIGLDASEAVLASAKAGIGIEDILEQIVEKVPAPAGDVEAPLKALIFDSVYDAYRGVILQIRVIDGMVRPGDKIKLMSNGKTFDVTEVGIFTPKAISRDFLATGDVGYLAASIKTVADTRVGDTVTLANRPAEAPLHGYKQLNPMVFAGIYPIDSGKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDNEVLEVSNPSEFPDPTKIDTIEEPYVKAQIMVPQEYVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVEKLKKIIPRQQFEVPVQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDDDDNKKK
>LR134491.1|VEI60393.1|1374583_1375060_-|acetyltransferase
MPIRLAQITDIPDLQKLLNQIFQVHQRVRPDLFQDTEQGSKYSEEELKDLLQDASKPIFVYVDDKGRVLGHLFLIIKASKEPSVSKPLKTLFIDDLCVSEEVRGQKIGQKLFDFALKYAKELGCYDLTLNVWNDNEGALAFYERQGLKARETKMEKIL
>LR134491.1|VEI60392.1|1373890_1374502_-|putative-lipoprotein
MPRRRASRRKSRRKTVFSILLLGLLLIIIGLAVYFVSAYFKNSDKTSGSKTQTHVVNPKKDPEEKQETTTSSQAPASSFDLAALAAGDYTSAVGTWTNELGDSLKFNATGLESATVQNVTEFTLTPGQAASDTIYQASLSSADGTVVYNLLFVKGGAAIPAEFFTEGYSDTSDTSRDRLYISSQTTFGSDDFSKGVLYKSDQQ
>LR134491.1|VEI60391.1|1373168_1373837_+|membrane-protein
MSKTLIFRILIALAGIIGVSIQITQSGWGMLLYYTTLSNALVFSFLIYLIIQEIMAPQKPFTLQLLRLKGGVTMIIIMTFMVYHFILAPKVRAYDYYTLRNFLVHYVLPLGMIADTLIVDRPRVYRWFDPLIWTVFPLVYFALALINGLIVKWEVPGSADSPFPYFFINVTKYGFKSVLINALSIALIYLFLSYSLVCIKYFIGSKKRAVQNQTARLKISSN
>LR134491.1|VEI60390.1|1371871_1373044_-|suB1079-undefined-product-1051177:1052352-reverse-MW:44904
MANFIDYVKANTEQSFADLPLNEVDIACLNELGYLPLGEWLQQPSLTRDSLCLKDYLDKEALVHFKHDFLVTKERLLLLDSLLSSQRFADLSLSCYVNEVSPEFERQFAAMVLSLPSLKHTQVIFRGTDDSLIGWQEDFRMTYMREIPAQRMASRYLADFLKDFDGQAVVSGHSKGGNLAVYASSHLLSSYQEKISAVYMLDAPGLHQSVLSSFGYGNIQSKILAIRPKESIVGIMLRAGVDAKIVDSVSFGINQHNVANWQVDLQLGQFIKVSKGTDFSLALEKTFQTWNEELSSQELKIFFDTFFNLFMDNGIDSLNDFLGRNRDIPQKLGHVMTDYFQDLDDDKRRLMRKSLAVLVSHFAGHSLKNTKESVNRRLPDFLKHFQLPMK
>LR134491.1|VEI60389.1|1370601_1371645_-|alcohol-dehydrogenase
MKVATFIEPGKMTVTEAPKPKLQKDTDAIIKIVRACVCGSDLWWFRGISQRENGSFAGHEAIGIVQEVGAAVTDVKAGDFVIVPFTHGCGHCAACRAGFDGNCTNQEPGGNAGYQGEYLRYTNANWALVKIPGQPSNYSDEQLNSLLSLADVMATGYHAAKTAEVKAGDTVVVMGDGAVGLCAVIGAKLLGAGRIIAMSRHADRQALAKEFGATDIVAERGDEGVARVLDLTEGNGADAVLECVGTDLSVDTATKICRPGAIIGRVGVPHNSEIATNALFWKNIGLRGGIASVTTYDREILLEAVLNGDIHPGRVFTKRFGLDDIQAAYEAMDKREAVKSLIVISED
>LR134491.1|VEI60388.1|1370167_1370560_-|transcriptional-regulator
MNIKKVSELTGVSADTIRYYERIGLIPPVPRHKSGVRNFTEHEIGILEFVRCFRKAGMSVESLIEYIALLEKGEGTEEARLALLIEQREEMDARIYELNQARERLNYKIENYENQIQKREHELFDENKES
>LR134491.1|VEI60398.1|1381859_1382237_-|toxin-antitoxin-system,-antitoxin-component,-HicB-family
MLKSYPAIFHKEKKGYWVEFPEFGGGTQGEDLEEAMKNARQMLESVLASYLDEGMKLPSPSDIREVSVDDGFVTMIQADPSPYLRNNKAIRKNVTVPEWLVRLADRDQVNYSEVLTKALEKKLQL
>LR134491.1|VEI60399.1|1382239_1382446_-|toxin-antitoxin-system,-HicA-family-protein
MPLTGKELARLAVKNGWEEVRVRGSHHHFKKNGVSCIVTIPIHGNQSLKVGLEKKILKDLGLLEQRRK
>LR134491.1|VEI60400.1|1382544_1383207_-|CRISPR-associated-protein-csn2
MKLNFPILDEPIELGKSTILAIEDVQVFAQLVKNFYQYEEDGELKLFDEKLKSLKTPELMLVTDILGYDVNAPSLMKLVHADLENQFNEKPEVKSMVEKLANTITELIAYECLENELDLEYDEITILELIKALGVKVETRSDTIFEKIFEILQVYKYLSKKKLLVFINSLSYFQKEEIVQILEYIHLSHMTVLFLEPHQVDGFSQYILDEDYFLITESGN
>LR134491.1|VEI60401.1|1383196_1383541_-|CRISPR-associated-protein-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNSANTAMIARLKENNPKKGSITLLTVTEKQFSRMIYLNGKRDTSVASSDSRLVFLGEAFPDET
>LR134491.1|VEI60402.1|1383537_1384407_-|CRISPR-associated-protein-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYQTEMIHLSEIDILLLETTDIVLSTMLIKRLVDENILVIFCDDKRLPTATLMPYYARHDSSLQLNNQISWAEEIKRDVWTNIIAQKILNQSCYLGECSYFEKSQSIMELYHGLEPFDPSNREGHSARIYFNTLFGNDFSREQDNDINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPIVDRIVYENRNSSFVKIKRELFSMFSDTYLYKNKEMYLTNIVSDYTKKVIKALNNDGKGVPEFRI
>LR134491.1|VEI60403.1|1384406_1388519_-|CRISPR-associated-protein-csn1
MKKPYSIGLDIGTNSVGWAVITDDYKVPAKKMKVLGNTDKNYIKKNLLGALLFDSGNTAEDRRLKRTARRRYTRRRNRLLYLQDIFSDEMNKVDESFFHRLEDSFLVSEDKRGDHHPIFGNVVDEVKYHEQFPTIYHLRKYLADTPEKADLRLVYLALAHMIKFRGHFLIDDPKLDVKNTDSQELFSQFLTAYDVTQEDSHLADVKINISDIITEKMNKSRKVEALLFHFPSQKKNSFFGNLVSLVFGLLPNFKTNFNLAEDAKLQLSKDSYDEDLENLLGQIGDEYTDVFVAARKLYDSILLSGILTVNDLSTKAILSASMVRRYEEHNKDLAKLKAFVKANFTHDVFKEVFSDASKNGYAGYIEGKTSQEDFYKYVKNLIGKVDGSADFIEKIDREDFLRKQRTFDNGSIPHQVHLAEMKAILRRQGEYYPFLKEHAEKIQQILTFRIPYYVGPLDRHGHSDFAWASFNSEEKVTPWNFEEIIDKNKSAQAFIERMTNQDLYLPNEKVLPKHSPLYEKYTVYNELTKIKYVTETGTAKFFDANLKQEIFDGLFKKERKVTKRKLLTFLEKNFDEFRIVDIQGLDKETETFNASYGIYQDLLKIIKDKAFMDDSENADILEDIVLTLTLFEDREMIKQRLAKYADLFDKKVIDNLARRRYTGWGRLSAKLLNGIRDKRSRKTIMDYLVDDGRSNRNLMQLITDDNLTFKDEIAKAQYSDNSDDLHQVVQDLAGSPAIKKGILQSVKIVDELVKVMGYEPEQIVVEMARENQTTAKGRRNSQQRYKRLEEAIKNLDRDLNYKILKEHPTDNQALQNDRLFLYYLQNGRDMYTGESLDINRLSDYDIDHIIPQAFIKDNSIDNRVLVSSAKNRGKSDDVPSEDVVNRMRPFWNKLLNCGLISQRKYSNLTKKELTPNDKAGFIKRQLVETRQITKHVARILDEHFNKEFDEDKKRIRKVKVVTLKSNLVSNFRKEFELYKVREINDYHHAHDAYLNAVVAKALLMKYPKLEPEFVYGEYPKYNSYRERKTATQRMFFYSNIMNMFKSKVKLADERIIERPMIEVNDETGEIAWDKTKHIATVKKVLSYPQINIVKKVEEQTGGLTNETIYPRGSFDKLLNRKNTLEASKYGGFGSPTVAYCVLVVADSKNENGKVKKLKLGSELLGITILEKNDFENNSLDFLSRKGYQGVQEKKIIKLPKYSLFEFQDGSRRMLSSVMANDNKRGDLQKANEMILPAYLVKLLYHAKHINSVGEPAHKNYINEHCSEFQDLLNYIRQFADKFVDVDKNLSKIRSLSKSMAEYSVSEICSSFVNLLTLTALGAPADFKFFGTTIPRKRYGSPQSILSATLIHQSITGLYETRIDLSKLGED
>LR134491.1|VEI60404.1|1388839_1390042_-|transposase
MRVVFGIDVSKVSSEVAILVNGEKVHGYTMPNDAIGFARLLGDLKTVHKPEIIFEATGVYSRRLQAFLEDNGYAYTRLNPLEAKKQLDSLRVRKTDQIDAEKLAQSQFVLNRKPTYVQEEVYQNLRDLSRFYQNLTEDIVRAKNRLHKVLQVTFPELENILATPTGEQYWKLVMTFPCKELVLDRDGNELLDSIRQSTSKRISDKRVVYLAEKLTALANQSYCAVKKTSPMFEEIRYYAQELLRLSEKRQTILDEMVELAQSLPEYEILLSIPGIAETTATSIIGELGDIRRFHSANQINAFIGIDLRHYESGNFLAQEHITKRGNPYARKILFKCIHNIASASHTNPCHIADFYEKRKRQSQTTSTKPHTIASIHRLIRTMYYLITHNKLYDYTSTQNQ
>LR134491.1|VEI60405.1|1390475_1391033_-|flavin-reductase
MKLLGITDASTSFSYNYLLLSFIQERFGLAFDFEWLELEKLPLFNQDDSRDKYPILQKLTDSILAADGLILAAEEYNHSLTPNLKSMLEWFSYQQSPFENKAVMLVGASLNEHIPQKAQEDLKRVLAAPGLKAWVMADKPFFLKTAPRAFDENGQIKDPDLIARLSNNFQHFIRFIHLTDSFKEK
>LR134491.1|VEI60406.1|1391156_1393688_-|ABC-transporter-membrane-protein-subunit-and-ATP-binding-protein
MLELKHITKIYDTAGIKRTALDDISINFRASEFVSVLGQSGSGKTTLLNIVGGLDQYTSGDLLINGKSTKDFKDKNWDRYRNNTIGFVFQSYNLISHQTALANVELALTLSGVSKSERSSRALEVLKRVGLEDHIHKRPSQMSGGQVQRVAIARALVNNPDILLADEPTGALDSETSLQIMNLLKEIAQERLVIMVTHNPNLAEKYSNRIIRVLDGRIIDDSNPYNDKDLDQSAVDFKKTKMSFMTALSLSFNNLLTKKGRTFLTAFAGSIGIIGIALILSLSNGAQKYISKTQEDTLVAYPLSIEKSSNENFMGLFAAGNEDSNSSKKKSEKKTLKTDNILKNMISTQVVDNDLASFKAYIKKHSRKFRKVTKDIQYSYKLSPRIYQTNTSKGVRPVNPSNLSKEVKNAGSNIQVLLSNLNVWQELSSSPKMLSSQYQVVDGHLPQKYNEVVLIAEENNKIDDYVLYSLGIKDVSELNSSKELKHIKESSYQYSDLVGRTYKLVINSDVYQKEGGIWVDRSDNDTYMKKLVNAAETIKIVGIVKPQKGTASGSSNAGVGYSQKLTSYLSEKINASSIAKEQLANKKRNIFTGQDFSSSSKPFSSANLSAEQRAALASMSAEELADYVNRYNENATATYDDNLEKIGIIDTANPETINFYADSFENKEALKDLISDYNKQVKKDKQKSKVINYTDTVGLMMSSVTTMINAVTYILVGFVAISLVVSSIMIGIITYISVLERTKEIGILRAMGASKKDVMRIFTAETVIEGAIAGILGILITLLLNIPINMIVNNLLDINNISSLPVWSAVVLIAISILLTVFAGILPSRVAAKKDPVEALRTE
>LR134491.1|VEI60407.1|1394032_1394671_-|Integral-membrane-protein
MKDKIHFAFSLLFLLAFSILATIYLVWLLYPLEISCLGLEKVVYMKSSQIQHNFNRLMLYLTSPFHWQLAMPDFPSSKDGLHHFEQVKWLFHLAQVCFLLTLPSFLLFMRNSIQKGYGILYKQALKIAALIPIILTLIAVAIGFDSFFTLFHQVLFAGDETWLFNPYTDSVIYILPETFFLHCFILFFLLYESSFCALLWQIRKKSKKREIV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: LR134491_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134491_4

1483083-1483167

TypeI-E

I-C,I-E,II-B

Consensus_repeat	Method
ACCCCCGCGTGTGCGGGTAAAAC	CRISPRCasFinder

1 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LR134491_4

>merge|LR134491|4|1483083-1483167|CRISPRCasFinder
ACCCCCGCGTGTGCGGGTAAAACATCTGTTCCTACTTTGCGACTTGTGAAAAAGAGAGGATCACCCCCGCGTGTGCGGGTAAAAC

>LR134491|4|3|1483083-1483167|CRISPRCasFinder
ACCCCCGCGTGTGCGGGTAAAAC	ATCTGTTCCTACTTTGCGACTTGTGAAAAAGAGAGGATC
ACCCCCGCGTGTGCGGGTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134491.1\|VEI60484.1\|1473499_1474270_+\|lactose-phosphotransferase-system-repressor	unknown	unknown	gnl\|CDD\|224268
LR134491.1\|VEI60483.1\|1472814_1473240_-\|galactose-6-phosphate-isomerase,-LacA-subunit	unknown	unknown	gnl\|CDD\|181505
LR134491.1\|VEI60489.1\|1482740_1483019_+\|addiction-module-toxin	unknown	unknown	gnl\|CDD\|379750
LR134491.1\|VEI60492.1\|1488499_1489441_-\|CRISPR-associated-protein	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LR134491.1\|VEI60485.1\|1474738_1474936_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|235382
LR134491.1\|VEI60500.1\|1498480_1501117_-\|putative-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
LR134491.1\|VEI60499.1\|1497159_1498077_+\|neutral-zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|282131
LR134491.1\|VEI60487.1\|1478632_1481878_-\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291
LR134491.1\|VEI60481.1\|1471338_1472271_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405
LR134491.1\|VEI60491.1\|1487595_1488498_-\|DNA-polymerase-III-subunit-alpha	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|378244
LR134491.1\|VEI60496.1\|1491886_1492483_-\|CRISPR-associated-Cse2-family-protein	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
LR134491.1\|VEI60497.1\|1492482_1494165_-\|CRISPR-system-CASCADE-complex-protein-CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
LR134491.1\|VEI60486.1\|1475010_1478643_-\|exonuclease-RexA	unknown	unknown	gnl\|CDD\|274299
LR134491.1\|VEI60498.1\|1494165_1496931_-\|helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
LR134491.1\|VEI60495.1\|1490823_1491897_-\|CRISPR-system-CASCADE-complex-protein-CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LR134491.1\|VEI60494.1\|1490083_1490809_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
LR134491.1\|VEI60480.1\|1470355_1471336_-\|tagatose-1,6-diphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
LR134491.1\|VEI60493.1\|1489442_1490084_-\|transcriptional-regulator	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
LR134491.1\|VEI60488.1\|1482467_1482740_+\|addiction-module-antitoxin	unknown	unknown	gnl\|CDD\|274102
LR134491.1\|VEI60482.1\|1472285_1472801_-\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506

Protein	Function_ID	Function_description	E-value
LR134491.1\|VEI60484.1\|1473499_1474270_+\|lactose-phosphotransferase-system-repressor	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.23891e-83
LR134491.1\|VEI60483.1\|1472814_1473240_-\|galactose-6-phosphate-isomerase,-LacA-subunit	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	4.1844e-82
LR134491.1\|VEI60489.1\|1482740_1483019_+\|addiction-module-toxin	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.49557e-41
LR134491.1\|VEI60492.1\|1488499_1489441_-\|CRISPR-associated-protein	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	9.1934e-131
LR134491.1\|VEI60485.1\|1474738_1474936_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|235382	PRK05270, PRK05270, UDP-glucose--hexose-1-phosphate uridylyltransferase.	8.22616e-18
LR134491.1\|VEI60500.1\|1498480_1501117_-\|putative-ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	3.68647e-15
LR134491.1\|VEI60499.1\|1497159_1498077_+\|neutral-zinc-metallopeptidase	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	4.72485e-136
LR134491.1\|VEI60487.1\|1478632_1481878_-\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134491.1\|VEI60481.1\|1471338_1472271_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	0
LR134491.1\|VEI60491.1\|1487595_1488498_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	5.36311e-36
LR134491.1\|VEI60496.1\|1491886_1492483_-\|CRISPR-associated-Cse2-family-protein	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	7.04145e-36
LR134491.1\|VEI60497.1\|1492482_1494165_-\|CRISPR-system-CASCADE-complex-protein-CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	7.66285e-84
LR134491.1\|VEI60486.1\|1475010_1478643_-\|exonuclease-RexA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134491.1\|VEI60498.1\|1494165_1496931_-\|helicase	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.66322e-92
LR134491.1\|VEI60495.1\|1490823_1491897_-\|CRISPR-system-CASCADE-complex-protein-CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	3.02907e-159
LR134491.1\|VEI60494.1\|1490083_1490809_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.17457e-44
LR134491.1\|VEI60480.1\|1470355_1471336_-\|tagatose-1,6-diphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
LR134491.1\|VEI60493.1\|1489442_1490084_-\|transcriptional-regulator	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.91064e-72
LR134491.1\|VEI60488.1\|1482467_1482740_+\|addiction-module-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	6.34118e-18
LR134491.1\|VEI60482.1\|1472285_1472801_-\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	3.23468e-124

>LR134491.1|VEI60489.1|1482740_1483019_+|addiction-module-toxin
MYQVKFTSAFKKSFKRMKKRGMDVSLLDDVIEKLHLGQALEDRYRDHELKGSFKGFRECHIKPDWLLIYLLEDDILTLTLVDTGSHADLFKM
>LR134491.1|VEI60488.1|1482467_1482740_+|addiction-module-antitoxin
MATVPTQIRIDETVKAQATSLFNDLGIDMSSAVNIFLRQCLLHDGLPFNVELPNYNSKTLEAMAEAKRISHDEAVVAYDNMSDLKKALEA
>LR134491.1|VEI60487.1|1478632_1481878_-|ATP-dependent-nuclease-subunit-B
MKLLYTDIQYDMTEILAAEARQAAKESKRVFYLAPNSLSFEKERAVLEALPEEASFAITITRFAQMARYFVLNEPYQREVIDDNGLAMIFYRALAGFSEQDLPVFGRLKQDTNFISQLVDLYKELKASNMTVLELTELNSPEKQEDLIKIFNKAEAILNAGNFDSQSKTAFFTQQLKAGHLDSELKDLLIIVDGFTRFSAEEENLISLLHEKKVPVIIGTYISQKAYRSAFSKGNVYQASLDFMRGLAAKFKTKPEYVRSKQKGLQAFANLSSIFESRHDFSADGRTLTKEDKEHIVIWDAVNQKEEAEHVARAIRRKLYQGYRYKDILVLLGDTDAYQLQVGKIFDKYEIPYYFGKAESMSSHPLVHFIDSLERIKRYNFRAEDVMNVLKSGLYGRLQQEELDKLEYYISYADIKGQSKFFNDFTLDNQGQFDLKQLNQWRSELISPLRQLVKAQKQLGKSLLKKLTVFLEDIALPENFVLLTAESGEIEQEKHEQVWKTFTAILEQFQRIFGGEKLTLDEFLSLLRASMLAADYRTIPAAVDVVTVKAYDLVEPHTNKIVFAMGMTQSNFPKIVQNRSLISDEERARINDITPDNRRFDIVSSENLKKNHFAALSLFNAATEELILSLPQILNETEDSTSSYLLELAEFGVPIVEKGRSGQLSNPEDIGNYKALLSRVIELERASIDQEMTKEEQTFWSVAVRYLRKKLNEQGIVIPEINDSMQTKPLAPSVIKARFPADEPINLSSSALTAFYNNQYLYFLRYVLGLQELETIHPDAKNHGSYLHRVFELVMQDAAAPDDFDGRLNQAIAKANEENSFKMLYEEDEESRYSLDVLEDIARSTASILRDDAQIQVESEEEAFELMLGNAVKIRGFIDRIDRLSDGSLGIIDYKSSRNTFDIQKFYNGLSPQLLTYMEAVNNRSDLPDRQKIFGAMYLHMQEPKLDLSSVKSLDKIPEAIHKELTYRGLFLDEEKAYLADGKYHLNDSVYSQKEIDLLLAYNRELYQKAARQIRSGHFLINPYSQDGKSVQGEQLKAITHFEADRHMPYARKLHQLPRKEKRQGFLHLMQAKQEEENNDF
>LR134491.1|VEI60486.1|1475010_1478643_-|exonuclease-RexA
MTFKNFLSAQEIASLQLEEAESNKQQKRTPEQIEAIYSYGNNILVSASAGSGKTFVMIERIMDKILRGVKIEDLFISTFTVKAAGELKERLEKKLTQHLQTASDPKLKQFLAEELASVQTADIGTMDAFTQKLVNQYGYTLGISPSFRIMQDKSEQDILKNDVFADLFADYMRSENRSVFVKLVKNFAGSRKDSDPFKQLVYKIYDFSQATDNPKSWLTDSFLKGAETYTDFSAIPEQEVAEFLASMEDTAKALRDLTDLEDYKQLTGKGAPTANYKKHLNMIEKLQDWAWNFESLYGREGLGKLANDIADLIPSGDSVTVAKVKYPVFKALQGRLAELRHLETIFAYQAESLPLLRLLQQFVLDFSEQYLQAKMQENAFEFSDIAHFAIEILEENPDIRQLYQNKYHEVMVDEYQDNNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNAKFKDFQEHPEHGKLILLKENFRSQSEVLATANSVFSHLMDEAVGEILYDDSHQLLAGSDRQKEAHPENATQVLLYDTDENEEALSDDDSNQISPSEVKLVAKEIIRLHNEEKVPFEDITLLVASRTRNDGIIQTFDHYGIPLVTDGGEQNYLKSVEIMVMLDTLRSIDNPLNDYALTALLRSPMFAFDEDELTRLALQKTSDSHKENLYEKMQNAINKQGQHPELMTPDLAAKLQAFLDVFGSWRRFARLHSLYDLIWKIYNDRFYYDYVGRLPRAEQRQANLYALALRANNFERTGFKGLSRFIRMIDRVLESQNDLADVEVALPKKAVTLMTIHKSKGLEFNYVFILNIDKKFSIQDMTSPLILSRRNGVGIKYLVDMKEELQEKLLPAVKVNMATLPYQLNKRELRLATLSEQMRLLYVAMTRAEKKLYLVGKGSAEKLADKYSGKSENNHLPAAERESYMTFQDWLLAIQQAFSSENLHFKTVFVTDEDLTEDKIGMVKGERLYNPDDLKDNRQSEDIARALDMLEAVEKLNKDYQAAINLPTVRTPSQVKKFYEPVMDTDGVDIMEKSPAAKLKFKLPDFSEKKAVAAAALGSSLHELMQRLRLSEEVGMNDILQALEELPAEADIKKAIQTDKILAFFQTTDLGKLIQKNADKVRREAPFAMLETDSASGEKFVVRGIIDGYILFENRIILFDYKTDKFTNSQDIKQRYQGQMALYAQALSKSYGISAVEKYLILLGGEQLEVVSV
>LR134491.1|VEI60485.1|1474738_1474936_-|galactose-1-phosphate-uridylyltransferase
MAFCMTIIHWPSILIGVQHFHVQQIKRENISLIEAMGLAILPPRLKDELAEVEKYRNRIFKSANP
>LR134491.1|VEI60484.1|1473499_1474270_+|lactose-phosphotransferase-system-repressor
MIKKERLNWILEQLKHQSIITVNDIIKELGVSDMTVRRDLAELEKEHQLIRVHGGAQSINLLNKPEKSNTEKQSEQVSEKKEIAAFTAQRVQDGETIFIGPGTTLEYFAQELLQRNLRIITNSLPVFDILKESPNIDLLLIGGEYRPVTGAFVGSLASSNIASLTFSKAFISANAVYQDSVATYSESEGTIQELALDKALEKYLLVDNQKFDSYDFFVFYKTSDFDYVVTDSKLSDDKQALYNKFTKVLKANTNSQ
>LR134491.1|VEI60483.1|1472814_1473240_-|galactose-6-phosphate-isomerase,-LacA-subunit
MAIVLGADKAGERLKNLVKDYLQAKGFDVTDVSAEGQDFVDLTLAVAAEVDKADDNLGVVIDAYGAGSFMVATKVKGMIAAEVSDERSAYMTRAHNNARIITMGAEIVGDELAKNIVKGFVEGHYDGGRHQIRVDMLNKMC
>LR134491.1|VEI60482.1|1472285_1472801_-|galactose-6-phosphate-isomerase-subunit-LacB
MKIAIGCDHIVTDEKMAVSEFLKSKGYEVLDFGTYDHVRTHYPIFGKKVGEAVSSGQADLGVCICGTGVGISNAANKVPGVRSALVRDMTSALYAKEELNANVISFGGKIVGGLLMNDIIEAFIKAEYKETEENKKLIAKIAHVETSNADQKDPDFFKEFLDKWDRGEYHD
>LR134491.1|VEI60481.1|1471338_1472271_-|tagatose-6-phosphate-kinase
MILTVTMNPSIDVSYPLDKLKLDTVNRVSEVTKTPGGKGLNVTRVLAEVGDDVSATGLIGGRLGDYLTEKLTQAGIKHQFFPIHGETRNCIAILHEGLQTEILESGPLIDPDEAEGFLHHFKLILTSFDVVTISGSLPEGLEKTYYAELIGLANLYRKKVVLDCSGAALEAVLKSSEKPAVIKPNSEELSQLLGRDISEDTDSLKDVLLDPLFEGIEWIIVSLGADGAFAKHRDKFYKVDIPKIDVVNPVGSGDSTVAGIASALAHDEDDASLLKKANVLGMLNAQEKMTGHVNMANYDTLYQQIQVKEV
>LR134491.1|VEI60480.1|1470355_1471336_-|tagatose-1,6-diphosphate-aldolase
MVLTEQKRKYMEKLSDENGIISALAFDQRGALKRLMAQHQTQEPSVAQMEELKVLVAQELTPYASSMLLDPEYGLPATKALDKNAGLLLAYEKTGYDTTSTKRLPDCLDVWSAKRLKEQGADAVKFLLYYDVDSSDELNQQKQAYIERIGSECVAEDIPFFLEILAYDEKIADAASPEYAKVKPHKVIEAMKVFSNPRFNIDVLKVEVPVNMNYVEGFGNGETVYSKAEAAAFFKQQDQATDLPYIYLSAGVSAKLFQDTLVFAHESGANFNGVLCGRATWAGSVKDYIEQGEEAARQWLRTTGFQNIDELNKVLQKTATSWKEKV
>LR134491.1|VEI60491.1|1487595_1488498_-|DNA-polymerase-III-subunit-alpha
MPLTVITLKSVPQSLRGDLTKWMQEIATGVFVGNFNTKVREQLWERVQDSVGSGEATLSYAYRNEIGYQFATINAQREVVDFDGIPLIRFPLDPEEGRKQDVFGYSDAARFRKARKFASPTKTIQHAVKPYVILDIETDGLDENKNKIIEIGAIKVSGSELKECHYLVQCDNTLPKEIVQLTGITDDMLQQEGVDIELALNGLLNFIGSLDIVGYGVNFDLTFINTKLTDLGYPVITNSVYDLMKYVKSEKLFLENYKLQTVLKSYGIDEKVPHRALLDARLILDLSTKVNKFLTRINQK
>LR134491.1|VEI60492.1|1488499_1489441_-|CRISPR-associated-protein
MKKQNGAKKTSLRELPKISDRVSFLYVEHAKINRVDSAITIADSRGVVRIPAAMLGVLLLGPGTDISHRAVELIGDTGTSMVWVGERGVRQYAHGRALAHSTKFLEKQAKLFSNTRSRLKVARKMYQMRFPNEDVSALTLQQLRGREGARIRSVYRTYSREYGVPWDKREYSPDDFESGTIVNQALSAANVALYGLVHSIIVALGASPGLGFVHTGHDLSFVYDVADLYKAETTIPLAFKIASESQEDDDIGKIARLKVRDSFVDGKLMTRMVKDIQYLLDIGDEEELLVDIIALWDDKDNLVKHGVSYREGD
>LR134491.1|VEI60493.1|1489442_1490084_-|transcriptional-regulator
MYISRVEIDHANRRKIKDLTHVDAYHGWVESSFPAEIEKSIRTRKLWRVDTIKGRNYLIVVSQGKPDLSLLEKYGVSGSAQTKPYDPFLENLKPGDNFQFRVVLNPVISLSNRDHSKRGVVKPHVTVERQMQYLMDRSEKNGFSLREGDFSVVERGYEVLKKSTMKPVRLVKAVYEGVLTITDVELFRKVLTDGIGKKKAYGFGLMTVIPIGK
>LR134491.1|VEI60494.1|1490083_1490809_-|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI
MKTILLKFSGPLQAWGTRSHFETRHTDFYPSKSAVIGLIAACLGHRRDEDEKIKQLNEIDFAVRVDQQGNLMRDFHIAQKYKTSGEFERSYVTNRYYLEDAIFVVAISHADDEFMTTIEKGLRNLYFQPFMGRRSCPVPADFVLGTGSENVVNTLHTLEWQADEWYMKKHSGEAGFSLEIYMDSHLTKNNHYQLRQDRVVSFSQKERRFGFRYESRMIVPVQNPFYKKNTDHNVFDFIGEE
>LR134491.1|VEI60495.1|1490823_1491897_-|CRISPR-system-CASCADE-complex-protein-CasC
MTTSQSKLFLDIHVIQTLPPSNINRDDTGSPKTAQYGGVRRARVSSQSWKRVMREYFNTNGKQSNVGIRTKEIVQYIADKMMELDSAISNDDALKKADNILNKGGIKTKDFKSKALFFLSDTQAKQLAQAAIDSVNDKKELQKMITSSPAIDIALFGRMVADDPSLNEDASSQVAHAISTHAVQTEFDFFTAVDDLAPEDNAGAGMLGTVEFNSSTLYRYANVAIHDLALQLDDTESVVNAVKLFVEAFANSLPTGKVNTFANQTLPQTLVVTVRTDRPVNLVSAFEKPVKSSEGYVKESIEKLANEFTKVEKMVKKSDLTFYVSLEEVAELSTIGVEKNSLPELLEDLSKELVNLM
>LR134491.1|VEI60496.1|1491886_1492483_-|CRISPR-associated-Cse2-family-protein
MPEESNGTVYSVTKKIVTKLTNQLDTSAGKAMLARLRHSAGKPISEAKEVWPILFENLPETFLSQYDDASYEETAILTAIQLYALYQQGRAQSVFDEVAEKHQNIGYSLKNLRREEDTIAVDRRFNTMITATTFDELTHHLRHLVTLLKAKSPETKIDFARLSADLYWFLRDYPETVRLNWARQYYKHSSKEEEENDN
>LR134491.1|VEI60497.1|1492482_1494165_-|CRISPR-system-CASCADE-complex-protein-CasA
MGKFNLLNEPWVSVVYDDRGATKEVSLLDLFQNAHNYKDLAGDTKTQDFAVLRVLLAVLHTVFSRFDANGQVYEYLEVDERFRQLEAVDEADLIDYEDDLYDTWVNLWNRGQFPEIVSHYLEKWRDRFYLFDEDYPFFQVRKEDISEEKINKAKAGSVSGKFINRTISESGNKVSLFAPRSSQKKELLGFGEIARWLLAFQGYTGTGDKTKFNNLDNEVKLSKGWLFDIGAIFVKGENLYETLLLNCILPYSQRDNLEHIQRPCWELASKELLEEYLSGKAINNLSSLYTSWSRSVYINPEIGLETPFSVQIVKLPEVPHQDNFLEPFTLWKYNLSGESKGSHTPNKHSVNQSLWRSFALLTTTVDNQRKPGIIDWLDVLKEEIGEQQIILNAVSMQDDGNATSWLPTDEIIDTLSINEFVLTDLHEKGWVTRINDVVEETKTVVSRTYRKFITDIREIRNIKSDAFTSQKVEECYFKIDQPFRQWLSSIQYEDEKDQKVFEWRGELKRLVLEEAKTLLHEGGPRDYIGIVDKDKGTVKNIATAYDHFTYWLNQNVKEGK
>LR134491.1|VEI60498.1|1494165_1496931_-|helicase
MDYYFWAKKKESNGKLLWLPLMQHLEDTMNVAGLLWEHWLGEGQRQLIEASLSSSQSNDDFGKQVIQFLAATHDLGKATPAFQTQKGYANSEDLDIQLLEKLERAGFAGISFVDLANPRESHHSIAGQYLLSRYGVHDDLATIVGGHHGKPIDNITDYTNQKAYESNFFQTEKPDSTIYRKWDRAQRDIFEWALEVSGFSSVEELPRVKQPAQVILSGLLIMADWIASNESYFPLISVEENEVGNKVNRLETGFMAWRQSGLWESSIKETRDIFERRFRFVPHDVQRVLSDKILQSQRPGIFILEAPMGIGKTEAALVAAEQLAAKTGRNGLYFGLPTQATSNGIFPRIEKWLESIAAEQNVDDHLSIHLVHGKAALNEKFAEILRSTNINIDESDNGSVVVNEWFSGRKTTALDDFVVGTVDQFLMVALKQKHLALRHLGFSKKVVVIDEVHAYDAYMNQYLLEAVKWMGAYGVPVVILSATLPADRRVELIINYLDGMGRKIRKPERKSLVDKFGSESYPVITYTDGFDIYQETDFPKRDNKNMVISRLQEEDLIETIENQLSGGGIVGLIVNTVRRAQDLAKRLSEKFGEDIVELLHSGFIATDRIRKEQNLLQMIGKGADRPKKKIIVGTQVIEQSLDIDFDVLISDLAPMDLLIQRMGRLHRHDIKRPVNHQRPYFYVLGMTDNLDFESGTSFVYGDYLLIRTQYFLPDTVTIPEDISSLVQKVYRNSDIDFEDENLNKKYQVAKNGHDVKIERQENKAKNYRIADPILVESISHKGNLIGWLKNPNLSESEETSYSQVRDIEETIEVIALKKVESGYGLFGKDKDISDYITDYQLAREVAQNTLRLPQSLSKSYNIDQSIKELENYNNQHLPTWRKSTWLKGALGIIFDENNEFVLNGRKLRYNEKYGISMEEVE
>LR134491.1|VEI60499.1|1497159_1498077_+|neutral-zinc-metallopeptidase
MKTDKLKESNNIEDRRGEESGAYGGDGSSIGSNLLLQLLFSRGSWKSKLVILIILLFIGGASGLGSILTGDNTNNSSPYQSSQVTRKKGTDVSSEETKFVSKVLASTEEFWTKKFKEEGLSYKKPKLVFYTDHIRTGCGQGQASAGPFYCSADQKIYLDISFYQELSSKYKAAGDFAMAYVIAHEVGHHVQNELGTMSDYNQKRQGLSETQANALNVRLELQADYYAGAWAKYVEGEGLLDTGDIEEAMRAAHAVGDDTLQKEAYGRTVPDSFTHGTSEQRQNWFNRGYKYGDIKHGDTFSADSL
>LR134491.1|VEI60500.1|1498480_1501117_-|putative-ABC-transporter-permease
MKKTYWKDIWRSIRKSKARFLSILLLLMLGSFALVGLKVTGPDMKHSAAEYLKKHNTMDLTVIANYGLSRDDKEELNSLKQAQVDYGYMTDVTIKGTDSAVRVYSKADKISTYAINSGRLPKNSQEIALDVTLRDDYKIGDEISFTQSQQDLLKKSTYRIVGFVTSSEIWSKTNMGASTAGDGSLSNYALVSDTAFKSNTYTIARIRYDDLKNLNPFSDTYAKKLIKHQEELDSLLKDNGKKRLENLQAAAQKKVDDSKKQVKTAKDQLAGQKSALSYLSGSQLTAAQKAVAEAEKKISKNEDDIKKAQADIAAMPEPSYSSYNRSTLPGGGGYQTFSSSSDSVSAIGNLFPVVLYLVAVLVTFTTMTRFVDEERTNSGVLKALGYSDRDIIRKFVIYGAVASIIGAVLGILAGHYVLAPIISSSTTSSLTFQQMHYYFYWNYALLALTVAFLSAVLPAFLVAKKELAEKPAQLLLPKPPVKGSKILLEKIPFIWNRLTFTHKVTARNIFRYKQRMLMTVFGVAGSAALLFAGLGIQSSLGKLINNQFNHITPYDLLLVENDEASETEQSALSQAVKSKDISQTMPIFYKQVDEKIAGITDKQSVSLTVSAHENFDHFINLKNIKNGKKLNLTDNGVIITELLARYYHVEAGDSFRFTDENGKKVRLKVAAVAEMNVGHYLFMTDKYYHRKFDERAKNNAYFINLKDSSSANISDKATELLAMDGVSAVSQKSSIVNTVDLVVKSLNGAMTVLIIVSVLLALVILYNLTNINVAERIRELSTIKVLGFYDQEVTMYIYRETISLSLIGILLGLLAGHYLHEIIMAMIGNDNIMFGSIIDSYIYAVPVFTVVFILLILGLMVNRRLKNLNMLEALKSAD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: LR134491_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134491_5

1485530-1487572

TypeI-E

I-C,I-E,II-B

Consensus_repeat	Method
AGGATCACCCCCGCGTGTGCGGGTAAAAC	PILER-CR
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CRISPRCasFinder
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CRT

33 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LR134491_5

>merge|LR134491|5|1485530-1487572|PILER-CR,CRISPRCasFinder,CRT
AGGATCACCCCCGCGTGTGCGGGTAAAACAAAAAACAAGGTCACAAAACGTCTTTGGATAAAGGATCACCCCCGCGTGTGCGGGTAAAACCTCATCAGTAAATCACCATTAGAAACATTATCAGGATCACCCCCGCGTGTGCGGGTAAAACATCATATAAACCTCTGTTTTATTGCTCATTTTAGGATCACCCCCGCGTGTGCGGGTAAAACCAGTGTTCACTGTAAAGATAGCGCCTGCCCCATAGGATCACCCCCGCGTGTGCGGGTAAAACACCGCATCAGTTGGAACATCTGCAACACGGCCAGGATCACCCCCGCGTGTGCGGGTAAAACTGATACTTAGCTATACGGCATCTATCCTATCTAAGGATCACCCCCGCGTGTGCGGGTAAAACTGAGTATCAATGGCAGCGGTGCTTCGATCGTTAGGATCACCCCCGCGTGTGCGGGTAAAACACAGGAGCTAAGGCTCTTGACTTTATCAAGTCAGGATCACCCCCGCGTGTGCGGGTAAAACTTTTGATAAGAGCTGATGTCGATAAAGTAATCAGGATCACCCCCGCGTGTGCGGGTAAAACTACAGCCTTCGGAGATGAGCCTTACAAAGTCTAGGATCACCCCCGCGTGTGCGGGTAAAACTTCAACAAGGATTTAACAATCTTAAAAATCCTAGGATCACCCCCGCGTGTGCGGGTAAAACCACTCTATGAACTGACCGGTCAATTTTTGGATAGGATCACCCCCGCGTGTGCGGGTAAAACTGTTAAATTGAGATGGTAGATAGGTTTTAGCCAGGATCACCCCCGCGTGTGCGGGTAAAACTTAAAACACCACTCTTTGCTTGAACGGATATAAGGATCACCCCCGCGTGTGCGGGTAAAACAAACAGTATTAAGTGCGAGTTATACAATGATCAGGATCACCCCCGCGTGTGCGGGTAAAACTGGCTATGCTAATTTTAAGGTAGGTGACTACTAGGATCACCCCCGCGTGTGCGGGTAAAACTCATAGATATAAGCTGTTTTATCCGATACATTAGGATCACCCCCGCGTGTGCGGGTAAAACCGTTATTTGCGATTGTCACGATTTGTTCTGTCAGGATCACCCCCGCGTGTGCGGGTAAAACAACACTTTCATCTGTTAGGTTTGACAAGAGTTAGGATCACCCCCGCGTGTGCGGGTAAAACCATAAAAGACGCATAAATATATTCAGCGTCATAGGATCACCCCCGCGTGTGCGGGTAAAACCTTGACGCTGTTAACGCTCTGAAATCAGCCGGAGGATCACCCCCGCGTGTGCGGGTAAAACTGACACAAAACCAACTATCAGAACATGCAGGGGGATCACCCCCGCGTGTGCGGGTAAAACACAGCCTGCAAGTGTAACACATACTATCAACAAGGATCACCCCCGCGTGTGCGGGTAAAACAGATCGCAAACAGGCGGCAACTGGAATCACTCAGGATCACCCCCGCGTGTGCGGGTAAAACTGTAAATAGCTGCCGGTTTGTCGTATGTGACTAGGATCACCCCCGCGTGTGCGGGTAAAACGAAATAACTGTCAATCCGTTTGTACCAATGGTAGGATCACCCCCGCGTGTGCGGGTAAAACCTTAATAATTTAATTAATTTATCAAGTTTATCAGGATCACCCCCGCGTGTGCGGGTAAAACCGAACGTTACCTTATCATTTGCTGAAACACCTAGGATCACCCCCGCGTGTGCGGGTAAAACTTTCTTTTAGGATTGAATGGTAAAAACGGTCTAGGATCACCCCCGCGTGTGCGGGTAAAACTCTCTGGTACGCTTGACGAGCTAAAAGATGCAGGGATCACCCCCGCGTGTGCGGGTAAAACTTTTTTAGATGTGTCATCGTATCAGCCAGCTAAGGATCACCCCCGCGTGTGCGGGTAAAACGGTTACATCTGGCAAGTCGACGCTGACGGCACAGGATCACCCCCGCGTGTGCGGGTAAAACAAAATAAAAACTCTTGAAAATCAAGGGTTTTTAGGATCACCCCCGCGTGTGCGGGTAAAAC

>LR134491|5|2|1485530-1487572|PILER-CR
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAAAAACAAGGTCACAAAACGTCTTTGGATAA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTCATCAGTAAATCACCATTAGAAACATTATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ATCATATAAACCTCTGTTTTATTGCTCATTTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CAGTGTTCACTGTAAAGATAGCGCCTGCCCCAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ACCGCATCAGTTGGAACATCTGCAACACGGCC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGATACTTAGCTATACGGCATCTATCCTATCTA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGAGTATCAATGGCAGCGGTGCTTCGATCGTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ACAGGAGCTAAGGCTCTTGACTTTATCAAGTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTTGATAAGAGCTGATGTCGATAAAGTAATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TACAGCCTTCGGAGATGAGCCTTACAAAGTCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTCAACAAGGATTTAACAATCTTAAAAATCCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CACTCTATGAACTGACCGGTCAATTTTTGGAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGTTAAATTGAGATGGTAGATAGGTTTTAGCC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTAAAACACCACTCTTTGCTTGAACGGATATA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAACAGTATTAAGTGCGAGTTATACAATGATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGGCTATGCTAATTTTAAGGTAGGTGACTACT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TCATAGATATAAGCTGTTTTATCCGATACATT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CGTTATTTGCGATTGTCACGATTTGTTCTGTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AACACTTTCATCTGTTAGGTTTGACAAGAGTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CATAAAAGACGCATAAATATATTCAGCGTCAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTTGACGCTGTTAACGCTCTGAAATCAGCCGG
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGACACAAAACCAACTATCAGAACATGCAGG
GGGATCACCCCCGCGTGTGCGGGTAAAAC	ACAGCCTGCAAGTGTAACACATACTATCAACA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AGATCGCAAACAGGCGGCAACTGGAATCACTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGTAAATAGCTGCCGGTTTGTCGTATGTGACT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	GAAATAACTGTCAATCCGTTTGTACCAATGGT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTTAATAATTTAATTAATTTATCAAGTTTATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CGAACGTTACCTTATCATTTGCTGAAACACCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTCTTTTAGGATTGAATGGTAAAAACGGTCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TCTCTGGTACGCTTGACGAGCTAAAAGATGCA
GGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTTTTAGATGTGTCATCGTATCAGCCAGCTA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	GGTTACATCTGGCAAGTCGACGCTGACGGCAC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAAATAAAAACTCTTGAAAATCAAGGGTTTTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC

>LR134491|5|4|1485530-1487572|CRISPRCasFinder
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAAAAACAAGGTCACAAAACGTCTTTGGATAA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTCATCAGTAAATCACCATTAGAAACATTATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ATCATATAAACCTCTGTTTTATTGCTCATTTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CAGTGTTCACTGTAAAGATAGCGCCTGCCCCAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ACCGCATCAGTTGGAACATCTGCAACACGGCC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGATACTTAGCTATACGGCATCTATCCTATCTA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGAGTATCAATGGCAGCGGTGCTTCGATCGTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ACAGGAGCTAAGGCTCTTGACTTTATCAAGTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTTGATAAGAGCTGATGTCGATAAAGTAATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TACAGCCTTCGGAGATGAGCCTTACAAAGTCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTCAACAAGGATTTAACAATCTTAAAAATCCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CACTCTATGAACTGACCGGTCAATTTTTGGAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGTTAAATTGAGATGGTAGATAGGTTTTAGCC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTAAAACACCACTCTTTGCTTGAACGGATATA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAACAGTATTAAGTGCGAGTTATACAATGATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGGCTATGCTAATTTTAAGGTAGGTGACTACT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TCATAGATATAAGCTGTTTTATCCGATACATT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CGTTATTTGCGATTGTCACGATTTGTTCTGTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AACACTTTCATCTGTTAGGTTTGACAAGAGTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CATAAAAGACGCATAAATATATTCAGCGTCAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTTGACGCTGTTAACGCTCTGAAATCAGCCGG
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGACACAAAACCAACTATCAGAACATGCAGG
GGGATCACCCCCGCGTGTGCGGGTAAAAC	ACAGCCTGCAAGTGTAACACATACTATCAACA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AGATCGCAAACAGGCGGCAACTGGAATCACTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGTAAATAGCTGCCGGTTTGTCGTATGTGACT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	GAAATAACTGTCAATCCGTTTGTACCAATGGT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTTAATAATTTAATTAATTTATCAAGTTTATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CGAACGTTACCTTATCATTTGCTGAAACACCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTCTTTTAGGATTGAATGGTAAAAACGGTCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TCTCTGGTACGCTTGACGAGCTAAAAGATGCA
GGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTTTTAGATGTGTCATCGTATCAGCCAGCTA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	GGTTACATCTGGCAAGTCGACGCTGACGGCAC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAAATAAAAACTCTTGAAAATCAAGGGTTTTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC

>LR134491|5|3|1485530-1487572|CRT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAAAAACAAGGTCACAAAACGTCTTTGGATAA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTCATCAGTAAATCACCATTAGAAACATTATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ATCATATAAACCTCTGTTTTATTGCTCATTTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CAGTGTTCACTGTAAAGATAGCGCCTGCCCCAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ACCGCATCAGTTGGAACATCTGCAACACGGCC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGATACTTAGCTATACGGCATCTATCCTATCTA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGAGTATCAATGGCAGCGGTGCTTCGATCGTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	ACAGGAGCTAAGGCTCTTGACTTTATCAAGTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTTGATAAGAGCTGATGTCGATAAAGTAATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TACAGCCTTCGGAGATGAGCCTTACAAAGTCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTCAACAAGGATTTAACAATCTTAAAAATCCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CACTCTATGAACTGACCGGTCAATTTTTGGAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGTTAAATTGAGATGGTAGATAGGTTTTAGCC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTAAAACACCACTCTTTGCTTGAACGGATATA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAACAGTATTAAGTGCGAGTTATACAATGATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGGCTATGCTAATTTTAAGGTAGGTGACTACT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TCATAGATATAAGCTGTTTTATCCGATACATT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CGTTATTTGCGATTGTCACGATTTGTTCTGTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AACACTTTCATCTGTTAGGTTTGACAAGAGTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CATAAAAGACGCATAAATATATTCAGCGTCAT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTTGACGCTGTTAACGCTCTGAAATCAGCCGG
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGACACAAAACCAACTATCAGAACATGCAGG
GGGATCACCCCCGCGTGTGCGGGTAAAAC	ACAGCCTGCAAGTGTAACACATACTATCAACA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AGATCGCAAACAGGCGGCAACTGGAATCACTC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TGTAAATAGCTGCCGGTTTGTCGTATGTGACT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	GAAATAACTGTCAATCCGTTTGTACCAATGGT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CTTAATAATTTAATTAATTTATCAAGTTTATC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	CGAACGTTACCTTATCATTTGCTGAAACACCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTCTTTTAGGATTGAATGGTAAAAACGGTCT
AGGATCACCCCCGCGTGTGCGGGTAAAAC	TCTCTGGTACGCTTGACGAGCTAAAAGATGCA
GGGATCACCCCCGCGTGTGCGGGTAAAAC	TTTTTTAGATGTGTCATCGTATCAGCCAGCTA
AGGATCACCCCCGCGTGTGCGGGTAAAAC	GGTTACATCTGGCAAGTCGACGCTGACGGCAC
AGGATCACCCCCGCGTGTGCGGGTAAAAC	AAAATAAAAACTCTTGAAAATCAAGGGTTTTT
AGGATCACCCCCGCGTGTGCGGGTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134491.1\|VEI60484.1\|1473499_1474270_+\|lactose-phosphotransferase-system-repressor	unknown	unknown	gnl\|CDD\|224268
LR134491.1\|VEI60483.1\|1472814_1473240_-\|galactose-6-phosphate-isomerase,-LacA-subunit	unknown	unknown	gnl\|CDD\|181505
LR134491.1\|VEI60489.1\|1482740_1483019_+\|addiction-module-toxin	unknown	unknown	gnl\|CDD\|379750
LR134491.1\|VEI60492.1\|1488499_1489441_-\|CRISPR-associated-protein	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LR134491.1\|VEI60485.1\|1474738_1474936_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|235382
LR134491.1\|VEI60500.1\|1498480_1501117_-\|putative-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
LR134491.1\|VEI60499.1\|1497159_1498077_+\|neutral-zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|282131
LR134491.1\|VEI60487.1\|1478632_1481878_-\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291
LR134491.1\|VEI60481.1\|1471338_1472271_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405
LR134491.1\|VEI60491.1\|1487595_1488498_-\|DNA-polymerase-III-subunit-alpha	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|378244
LR134491.1\|VEI60490.1\|1483113_1485477_-\|putative-conjugative-transposon-membrane-protein	unknown	unknown	gnl\|CDD\|376232
LR134491.1\|VEI60496.1\|1491886_1492483_-\|CRISPR-associated-Cse2-family-protein	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
LR134491.1\|VEI60486.1\|1475010_1478643_-\|exonuclease-RexA	unknown	unknown	gnl\|CDD\|274299
LR134491.1\|VEI60497.1\|1492482_1494165_-\|CRISPR-system-CASCADE-complex-protein-CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
LR134491.1\|VEI60498.1\|1494165_1496931_-\|helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
LR134491.1\|VEI60495.1\|1490823_1491897_-\|CRISPR-system-CASCADE-complex-protein-CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LR134491.1\|VEI60494.1\|1490083_1490809_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
LR134491.1\|VEI60493.1\|1489442_1490084_-\|transcriptional-regulator	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
LR134491.1\|VEI60488.1\|1482467_1482740_+\|addiction-module-antitoxin	unknown	unknown	gnl\|CDD\|274102
LR134491.1\|VEI60482.1\|1472285_1472801_-\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506

Protein	Function_ID	Function_description	E-value
LR134491.1\|VEI60484.1\|1473499_1474270_+\|lactose-phosphotransferase-system-repressor	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.23891e-83
LR134491.1\|VEI60483.1\|1472814_1473240_-\|galactose-6-phosphate-isomerase,-LacA-subunit	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	4.1844e-82
LR134491.1\|VEI60489.1\|1482740_1483019_+\|addiction-module-toxin	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.49557e-41
LR134491.1\|VEI60492.1\|1488499_1489441_-\|CRISPR-associated-protein	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	9.1934e-131
LR134491.1\|VEI60485.1\|1474738_1474936_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|235382	PRK05270, PRK05270, UDP-glucose--hexose-1-phosphate uridylyltransferase.	8.22616e-18
LR134491.1\|VEI60500.1\|1498480_1501117_-\|putative-ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	3.68647e-15
LR134491.1\|VEI60499.1\|1497159_1498077_+\|neutral-zinc-metallopeptidase	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	4.72485e-136
LR134491.1\|VEI60487.1\|1478632_1481878_-\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134491.1\|VEI60481.1\|1471338_1472271_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	0
LR134491.1\|VEI60491.1\|1487595_1488498_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	5.36311e-36
LR134491.1\|VEI60490.1\|1483113_1485477_-\|putative-conjugative-transposon-membrane-protein	gnl\|CDD\|376232	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine residue.	9.66418e-38
LR134491.1\|VEI60496.1\|1491886_1492483_-\|CRISPR-associated-Cse2-family-protein	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	7.04145e-36
LR134491.1\|VEI60486.1\|1475010_1478643_-\|exonuclease-RexA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
LR134491.1\|VEI60497.1\|1492482_1494165_-\|CRISPR-system-CASCADE-complex-protein-CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	7.66285e-84
LR134491.1\|VEI60498.1\|1494165_1496931_-\|helicase	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.66322e-92
LR134491.1\|VEI60495.1\|1490823_1491897_-\|CRISPR-system-CASCADE-complex-protein-CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	3.02907e-159
LR134491.1\|VEI60494.1\|1490083_1490809_-\|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.17457e-44
LR134491.1\|VEI60493.1\|1489442_1490084_-\|transcriptional-regulator	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.91064e-72
LR134491.1\|VEI60488.1\|1482467_1482740_+\|addiction-module-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	6.34118e-18
LR134491.1\|VEI60482.1\|1472285_1472801_-\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	3.23468e-124

>LR134491.1|VEI60490.1|1483113_1485477_-|putative-conjugative-transposon-membrane-protein
MDGVKEAVVGRHLAQLQSELSGRPLRWSHDQLAEGLQTAIDNNFFTDGKHADWITLAVDNDTGGHNFIDSLREKGATINEDLPDLQPGQDKTDWNDALKQHRILGLSDGRETYQTRSEEQEVQLKDISTLHSEWKQELKNKVTQHLGHTPQWWELERNQGAFLTTELDQLFAKRSSLELDAHYADNSRYVRQQIKKLDEQILMTIQQEKAPEKTQEQITSEQHKKSETNIRDLSEQAQEAAPLPEVTPSQPLKDLSPSQTESHSLLHFTIENPKRSIYKDNYHPIKTHELNKLNHHAPNIQSAAQWYLDNLSDTTLHYFYQQGNKQYNINIEFEQYHFMHLTGLFPLKRGQTAVKTLHDFAEGRGTYDNLMIADNEAAFQKIKVLPDLKAIMETDAFYFDQMEDIPKLQSLSLEKAIKSDDKDVLLAFSSNEENIYPASLMELTKQLKIQTEQSQHQNVILGVYQERDGKFTQLSINEAYITDNGEEMLSILKGEQVSSDEPSHDLTPSPAEALIDAATFTKVLDTAYNVGNPADLGVEVPEEFQASWEQYNQLSEASLGDFKTIIAKADELGLLDKTTAFYQDWQQDQIYNDTYHVRLRSSNEGPNSPQLPFEPTHLVSYQDFVTEVYKANQDVSRTKPIAFDIYAPGGALIKEGVRYAIGDETQPVSRLLGLGYRRLEDYPNLAAIDEKVLSQLENQEVNQSIATEANEQTVASQETPQERDSRENFQSPKQGVKNGLAQRVEEIMAEDATKILISSIPQVQENLSIEVLPAHAGVILSFSQVAK
>LR134491.1|VEI60489.1|1482740_1483019_+|addiction-module-toxin
MYQVKFTSAFKKSFKRMKKRGMDVSLLDDVIEKLHLGQALEDRYRDHELKGSFKGFRECHIKPDWLLIYLLEDDILTLTLVDTGSHADLFKM
>LR134491.1|VEI60488.1|1482467_1482740_+|addiction-module-antitoxin
MATVPTQIRIDETVKAQATSLFNDLGIDMSSAVNIFLRQCLLHDGLPFNVELPNYNSKTLEAMAEAKRISHDEAVVAYDNMSDLKKALEA
>LR134491.1|VEI60487.1|1478632_1481878_-|ATP-dependent-nuclease-subunit-B
MKLLYTDIQYDMTEILAAEARQAAKESKRVFYLAPNSLSFEKERAVLEALPEEASFAITITRFAQMARYFVLNEPYQREVIDDNGLAMIFYRALAGFSEQDLPVFGRLKQDTNFISQLVDLYKELKASNMTVLELTELNSPEKQEDLIKIFNKAEAILNAGNFDSQSKTAFFTQQLKAGHLDSELKDLLIIVDGFTRFSAEEENLISLLHEKKVPVIIGTYISQKAYRSAFSKGNVYQASLDFMRGLAAKFKTKPEYVRSKQKGLQAFANLSSIFESRHDFSADGRTLTKEDKEHIVIWDAVNQKEEAEHVARAIRRKLYQGYRYKDILVLLGDTDAYQLQVGKIFDKYEIPYYFGKAESMSSHPLVHFIDSLERIKRYNFRAEDVMNVLKSGLYGRLQQEELDKLEYYISYADIKGQSKFFNDFTLDNQGQFDLKQLNQWRSELISPLRQLVKAQKQLGKSLLKKLTVFLEDIALPENFVLLTAESGEIEQEKHEQVWKTFTAILEQFQRIFGGEKLTLDEFLSLLRASMLAADYRTIPAAVDVVTVKAYDLVEPHTNKIVFAMGMTQSNFPKIVQNRSLISDEERARINDITPDNRRFDIVSSENLKKNHFAALSLFNAATEELILSLPQILNETEDSTSSYLLELAEFGVPIVEKGRSGQLSNPEDIGNYKALLSRVIELERASIDQEMTKEEQTFWSVAVRYLRKKLNEQGIVIPEINDSMQTKPLAPSVIKARFPADEPINLSSSALTAFYNNQYLYFLRYVLGLQELETIHPDAKNHGSYLHRVFELVMQDAAAPDDFDGRLNQAIAKANEENSFKMLYEEDEESRYSLDVLEDIARSTASILRDDAQIQVESEEEAFELMLGNAVKIRGFIDRIDRLSDGSLGIIDYKSSRNTFDIQKFYNGLSPQLLTYMEAVNNRSDLPDRQKIFGAMYLHMQEPKLDLSSVKSLDKIPEAIHKELTYRGLFLDEEKAYLADGKYHLNDSVYSQKEIDLLLAYNRELYQKAARQIRSGHFLINPYSQDGKSVQGEQLKAITHFEADRHMPYARKLHQLPRKEKRQGFLHLMQAKQEEENNDF
>LR134491.1|VEI60486.1|1475010_1478643_-|exonuclease-RexA
MTFKNFLSAQEIASLQLEEAESNKQQKRTPEQIEAIYSYGNNILVSASAGSGKTFVMIERIMDKILRGVKIEDLFISTFTVKAAGELKERLEKKLTQHLQTASDPKLKQFLAEELASVQTADIGTMDAFTQKLVNQYGYTLGISPSFRIMQDKSEQDILKNDVFADLFADYMRSENRSVFVKLVKNFAGSRKDSDPFKQLVYKIYDFSQATDNPKSWLTDSFLKGAETYTDFSAIPEQEVAEFLASMEDTAKALRDLTDLEDYKQLTGKGAPTANYKKHLNMIEKLQDWAWNFESLYGREGLGKLANDIADLIPSGDSVTVAKVKYPVFKALQGRLAELRHLETIFAYQAESLPLLRLLQQFVLDFSEQYLQAKMQENAFEFSDIAHFAIEILEENPDIRQLYQNKYHEVMVDEYQDNNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNAKFKDFQEHPEHGKLILLKENFRSQSEVLATANSVFSHLMDEAVGEILYDDSHQLLAGSDRQKEAHPENATQVLLYDTDENEEALSDDDSNQISPSEVKLVAKEIIRLHNEEKVPFEDITLLVASRTRNDGIIQTFDHYGIPLVTDGGEQNYLKSVEIMVMLDTLRSIDNPLNDYALTALLRSPMFAFDEDELTRLALQKTSDSHKENLYEKMQNAINKQGQHPELMTPDLAAKLQAFLDVFGSWRRFARLHSLYDLIWKIYNDRFYYDYVGRLPRAEQRQANLYALALRANNFERTGFKGLSRFIRMIDRVLESQNDLADVEVALPKKAVTLMTIHKSKGLEFNYVFILNIDKKFSIQDMTSPLILSRRNGVGIKYLVDMKEELQEKLLPAVKVNMATLPYQLNKRELRLATLSEQMRLLYVAMTRAEKKLYLVGKGSAEKLADKYSGKSENNHLPAAERESYMTFQDWLLAIQQAFSSENLHFKTVFVTDEDLTEDKIGMVKGERLYNPDDLKDNRQSEDIARALDMLEAVEKLNKDYQAAINLPTVRTPSQVKKFYEPVMDTDGVDIMEKSPAAKLKFKLPDFSEKKAVAAAALGSSLHELMQRLRLSEEVGMNDILQALEELPAEADIKKAIQTDKILAFFQTTDLGKLIQKNADKVRREAPFAMLETDSASGEKFVVRGIIDGYILFENRIILFDYKTDKFTNSQDIKQRYQGQMALYAQALSKSYGISAVEKYLILLGGEQLEVVSV
>LR134491.1|VEI60485.1|1474738_1474936_-|galactose-1-phosphate-uridylyltransferase
MAFCMTIIHWPSILIGVQHFHVQQIKRENISLIEAMGLAILPPRLKDELAEVEKYRNRIFKSANP
>LR134491.1|VEI60484.1|1473499_1474270_+|lactose-phosphotransferase-system-repressor
MIKKERLNWILEQLKHQSIITVNDIIKELGVSDMTVRRDLAELEKEHQLIRVHGGAQSINLLNKPEKSNTEKQSEQVSEKKEIAAFTAQRVQDGETIFIGPGTTLEYFAQELLQRNLRIITNSLPVFDILKESPNIDLLLIGGEYRPVTGAFVGSLASSNIASLTFSKAFISANAVYQDSVATYSESEGTIQELALDKALEKYLLVDNQKFDSYDFFVFYKTSDFDYVVTDSKLSDDKQALYNKFTKVLKANTNSQ
>LR134491.1|VEI60483.1|1472814_1473240_-|galactose-6-phosphate-isomerase,-LacA-subunit
MAIVLGADKAGERLKNLVKDYLQAKGFDVTDVSAEGQDFVDLTLAVAAEVDKADDNLGVVIDAYGAGSFMVATKVKGMIAAEVSDERSAYMTRAHNNARIITMGAEIVGDELAKNIVKGFVEGHYDGGRHQIRVDMLNKMC
>LR134491.1|VEI60482.1|1472285_1472801_-|galactose-6-phosphate-isomerase-subunit-LacB
MKIAIGCDHIVTDEKMAVSEFLKSKGYEVLDFGTYDHVRTHYPIFGKKVGEAVSSGQADLGVCICGTGVGISNAANKVPGVRSALVRDMTSALYAKEELNANVISFGGKIVGGLLMNDIIEAFIKAEYKETEENKKLIAKIAHVETSNADQKDPDFFKEFLDKWDRGEYHD
>LR134491.1|VEI60481.1|1471338_1472271_-|tagatose-6-phosphate-kinase
MILTVTMNPSIDVSYPLDKLKLDTVNRVSEVTKTPGGKGLNVTRVLAEVGDDVSATGLIGGRLGDYLTEKLTQAGIKHQFFPIHGETRNCIAILHEGLQTEILESGPLIDPDEAEGFLHHFKLILTSFDVVTISGSLPEGLEKTYYAELIGLANLYRKKVVLDCSGAALEAVLKSSEKPAVIKPNSEELSQLLGRDISEDTDSLKDVLLDPLFEGIEWIIVSLGADGAFAKHRDKFYKVDIPKIDVVNPVGSGDSTVAGIASALAHDEDDASLLKKANVLGMLNAQEKMTGHVNMANYDTLYQQIQVKEV
>LR134491.1|VEI60491.1|1487595_1488498_-|DNA-polymerase-III-subunit-alpha
MPLTVITLKSVPQSLRGDLTKWMQEIATGVFVGNFNTKVREQLWERVQDSVGSGEATLSYAYRNEIGYQFATINAQREVVDFDGIPLIRFPLDPEEGRKQDVFGYSDAARFRKARKFASPTKTIQHAVKPYVILDIETDGLDENKNKIIEIGAIKVSGSELKECHYLVQCDNTLPKEIVQLTGITDDMLQQEGVDIELALNGLLNFIGSLDIVGYGVNFDLTFINTKLTDLGYPVITNSVYDLMKYVKSEKLFLENYKLQTVLKSYGIDEKVPHRALLDARLILDLSTKVNKFLTRINQK
>LR134491.1|VEI60492.1|1488499_1489441_-|CRISPR-associated-protein
MKKQNGAKKTSLRELPKISDRVSFLYVEHAKINRVDSAITIADSRGVVRIPAAMLGVLLLGPGTDISHRAVELIGDTGTSMVWVGERGVRQYAHGRALAHSTKFLEKQAKLFSNTRSRLKVARKMYQMRFPNEDVSALTLQQLRGREGARIRSVYRTYSREYGVPWDKREYSPDDFESGTIVNQALSAANVALYGLVHSIIVALGASPGLGFVHTGHDLSFVYDVADLYKAETTIPLAFKIASESQEDDDIGKIARLKVRDSFVDGKLMTRMVKDIQYLLDIGDEEELLVDIIALWDDKDNLVKHGVSYREGD
>LR134491.1|VEI60493.1|1489442_1490084_-|transcriptional-regulator
MYISRVEIDHANRRKIKDLTHVDAYHGWVESSFPAEIEKSIRTRKLWRVDTIKGRNYLIVVSQGKPDLSLLEKYGVSGSAQTKPYDPFLENLKPGDNFQFRVVLNPVISLSNRDHSKRGVVKPHVTVERQMQYLMDRSEKNGFSLREGDFSVVERGYEVLKKSTMKPVRLVKAVYEGVLTITDVELFRKVLTDGIGKKKAYGFGLMTVIPIGK
>LR134491.1|VEI60494.1|1490083_1490809_-|CRISPR-associated-protein-Cas5/CasD,-subtype-I-E/ECOLI
MKTILLKFSGPLQAWGTRSHFETRHTDFYPSKSAVIGLIAACLGHRRDEDEKIKQLNEIDFAVRVDQQGNLMRDFHIAQKYKTSGEFERSYVTNRYYLEDAIFVVAISHADDEFMTTIEKGLRNLYFQPFMGRRSCPVPADFVLGTGSENVVNTLHTLEWQADEWYMKKHSGEAGFSLEIYMDSHLTKNNHYQLRQDRVVSFSQKERRFGFRYESRMIVPVQNPFYKKNTDHNVFDFIGEE
>LR134491.1|VEI60495.1|1490823_1491897_-|CRISPR-system-CASCADE-complex-protein-CasC
MTTSQSKLFLDIHVIQTLPPSNINRDDTGSPKTAQYGGVRRARVSSQSWKRVMREYFNTNGKQSNVGIRTKEIVQYIADKMMELDSAISNDDALKKADNILNKGGIKTKDFKSKALFFLSDTQAKQLAQAAIDSVNDKKELQKMITSSPAIDIALFGRMVADDPSLNEDASSQVAHAISTHAVQTEFDFFTAVDDLAPEDNAGAGMLGTVEFNSSTLYRYANVAIHDLALQLDDTESVVNAVKLFVEAFANSLPTGKVNTFANQTLPQTLVVTVRTDRPVNLVSAFEKPVKSSEGYVKESIEKLANEFTKVEKMVKKSDLTFYVSLEEVAELSTIGVEKNSLPELLEDLSKELVNLM
>LR134491.1|VEI60496.1|1491886_1492483_-|CRISPR-associated-Cse2-family-protein
MPEESNGTVYSVTKKIVTKLTNQLDTSAGKAMLARLRHSAGKPISEAKEVWPILFENLPETFLSQYDDASYEETAILTAIQLYALYQQGRAQSVFDEVAEKHQNIGYSLKNLRREEDTIAVDRRFNTMITATTFDELTHHLRHLVTLLKAKSPETKIDFARLSADLYWFLRDYPETVRLNWARQYYKHSSKEEEENDN
>LR134491.1|VEI60497.1|1492482_1494165_-|CRISPR-system-CASCADE-complex-protein-CasA
MGKFNLLNEPWVSVVYDDRGATKEVSLLDLFQNAHNYKDLAGDTKTQDFAVLRVLLAVLHTVFSRFDANGQVYEYLEVDERFRQLEAVDEADLIDYEDDLYDTWVNLWNRGQFPEIVSHYLEKWRDRFYLFDEDYPFFQVRKEDISEEKINKAKAGSVSGKFINRTISESGNKVSLFAPRSSQKKELLGFGEIARWLLAFQGYTGTGDKTKFNNLDNEVKLSKGWLFDIGAIFVKGENLYETLLLNCILPYSQRDNLEHIQRPCWELASKELLEEYLSGKAINNLSSLYTSWSRSVYINPEIGLETPFSVQIVKLPEVPHQDNFLEPFTLWKYNLSGESKGSHTPNKHSVNQSLWRSFALLTTTVDNQRKPGIIDWLDVLKEEIGEQQIILNAVSMQDDGNATSWLPTDEIIDTLSINEFVLTDLHEKGWVTRINDVVEETKTVVSRTYRKFITDIREIRNIKSDAFTSQKVEECYFKIDQPFRQWLSSIQYEDEKDQKVFEWRGELKRLVLEEAKTLLHEGGPRDYIGIVDKDKGTVKNIATAYDHFTYWLNQNVKEGK
>LR134491.1|VEI60498.1|1494165_1496931_-|helicase
MDYYFWAKKKESNGKLLWLPLMQHLEDTMNVAGLLWEHWLGEGQRQLIEASLSSSQSNDDFGKQVIQFLAATHDLGKATPAFQTQKGYANSEDLDIQLLEKLERAGFAGISFVDLANPRESHHSIAGQYLLSRYGVHDDLATIVGGHHGKPIDNITDYTNQKAYESNFFQTEKPDSTIYRKWDRAQRDIFEWALEVSGFSSVEELPRVKQPAQVILSGLLIMADWIASNESYFPLISVEENEVGNKVNRLETGFMAWRQSGLWESSIKETRDIFERRFRFVPHDVQRVLSDKILQSQRPGIFILEAPMGIGKTEAALVAAEQLAAKTGRNGLYFGLPTQATSNGIFPRIEKWLESIAAEQNVDDHLSIHLVHGKAALNEKFAEILRSTNINIDESDNGSVVVNEWFSGRKTTALDDFVVGTVDQFLMVALKQKHLALRHLGFSKKVVVIDEVHAYDAYMNQYLLEAVKWMGAYGVPVVILSATLPADRRVELIINYLDGMGRKIRKPERKSLVDKFGSESYPVITYTDGFDIYQETDFPKRDNKNMVISRLQEEDLIETIENQLSGGGIVGLIVNTVRRAQDLAKRLSEKFGEDIVELLHSGFIATDRIRKEQNLLQMIGKGADRPKKKIIVGTQVIEQSLDIDFDVLISDLAPMDLLIQRMGRLHRHDIKRPVNHQRPYFYVLGMTDNLDFESGTSFVYGDYLLIRTQYFLPDTVTIPEDISSLVQKVYRNSDIDFEDENLNKKYQVAKNGHDVKIERQENKAKNYRIADPILVESISHKGNLIGWLKNPNLSESEETSYSQVRDIEETIEVIALKKVESGYGLFGKDKDISDYITDYQLAREVAQNTLRLPQSLSKSYNIDQSIKELENYNNQHLPTWRKSTWLKGALGIIFDENNEFVLNGRKLRYNEKYGISMEEVE
>LR134491.1|VEI60499.1|1497159_1498077_+|neutral-zinc-metallopeptidase
MKTDKLKESNNIEDRRGEESGAYGGDGSSIGSNLLLQLLFSRGSWKSKLVILIILLFIGGASGLGSILTGDNTNNSSPYQSSQVTRKKGTDVSSEETKFVSKVLASTEEFWTKKFKEEGLSYKKPKLVFYTDHIRTGCGQGQASAGPFYCSADQKIYLDISFYQELSSKYKAAGDFAMAYVIAHEVGHHVQNELGTMSDYNQKRQGLSETQANALNVRLELQADYYAGAWAKYVEGEGLLDTGDIEEAMRAAHAVGDDTLQKEAYGRTVPDSFTHGTSEQRQNWFNRGYKYGDIKHGDTFSADSL
>LR134491.1|VEI60500.1|1498480_1501117_-|putative-ABC-transporter-permease
MKKTYWKDIWRSIRKSKARFLSILLLLMLGSFALVGLKVTGPDMKHSAAEYLKKHNTMDLTVIANYGLSRDDKEELNSLKQAQVDYGYMTDVTIKGTDSAVRVYSKADKISTYAINSGRLPKNSQEIALDVTLRDDYKIGDEISFTQSQQDLLKKSTYRIVGFVTSSEIWSKTNMGASTAGDGSLSNYALVSDTAFKSNTYTIARIRYDDLKNLNPFSDTYAKKLIKHQEELDSLLKDNGKKRLENLQAAAQKKVDDSKKQVKTAKDQLAGQKSALSYLSGSQLTAAQKAVAEAEKKISKNEDDIKKAQADIAAMPEPSYSSYNRSTLPGGGGYQTFSSSSDSVSAIGNLFPVVLYLVAVLVTFTTMTRFVDEERTNSGVLKALGYSDRDIIRKFVIYGAVASIIGAVLGILAGHYVLAPIISSSTTSSLTFQQMHYYFYWNYALLALTVAFLSAVLPAFLVAKKELAEKPAQLLLPKPPVKGSKILLEKIPFIWNRLTFTHKVTARNIFRYKQRMLMTVFGVAGSAALLFAGLGIQSSLGKLINNQFNHITPYDLLLVENDEASETEQSALSQAVKSKDISQTMPIFYKQVDEKIAGITDKQSVSLTVSAHENFDHFINLKNIKNGKKLNLTDNGVIITELLARYYHVEAGDSFRFTDENGKKVRLKVAAVAEMNVGHYLFMTDKYYHRKFDERAKNNAYFINLKDSSSANISDKATELLAMDGVSAVSQKSSIVNTVDLVVKSLNGAMTVLIIVSVLLALVILYNLTNINVAERIRELSTIKVLGFYDQEVTMYIYRETISLSLIGILLGLLAGHYLHEIIMAMIGNDNIMFGSIIDSYIYAVPVFTVVFILLILGLMVNRRLKNLNMLEALKSAD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134491_3	3.9\|1381508\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381508-1381537	30	NC_027120	Lactococcus phage 1358, complete sequence	31286-31315	5	0.833
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP041067	Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence	29390-29419	6	0.8
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NC_024215	Lactococcus phage P078, complete genome	36173-36204	6	0.812
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NC_024208	Lactococcus phage P118, complete genome	36231-36262	6	0.812
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NC_024214	Lactococcus phage P162, complete genome	37033-37064	6	0.812
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NC_024203	Lactococcus phage P092, complete genome	35648-35679	6	0.812
LR134491_5	5.21\|1486781\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486781-1486812	32	MK448940	Streptococcus phage Javan444, complete genome	20693-20724	6	0.812
LR134491_5	5.21\|1486781\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486781-1486812	32	MK448932	Streptococcus phage Javan42, complete genome	20731-20762	6	0.812
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	LN681534	Clostridium phage phiCD24-1, complete genome	32739-32770	6	0.812
LR134491_5	5.33\|1487512\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487512-1487543	32	NC_048651	Aeribacillus phage AP45, complete genome	51488-51519	6	0.812
LR134491_3	3.5\|1381244\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381244-1381273	30	MK448885	Streptococcus phage Javan252, complete genome	20289-20318	7	0.767
LR134491_3	3.8\|1381442\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381442-1381471	30	MN693504	Marine virus AFVG_25M410, complete genome	20496-20525	7	0.767
LR134491_3	3.9\|1381508\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381508-1381537	30	NC_047861	Bordetella phage vB_BbrM_PHB04, complete genome	10048-10077	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	CP016281	Clostridium tyrobutyricum strain W428 plasmid pW428, complete sequence	6967-6996	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP014171	Clostridium tyrobutyricum strain KCTC 5387 plasmid pCTK01, complete sequence	29773-29802	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250021	Prevotella phage Lak-B2, complete genome	321978-322007	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250024	Prevotella phage Lak-B5, complete genome	316000-316029	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250028	Prevotella phage Lak-B9, complete genome	320890-320919	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250023	Prevotella phage Lak-B4, complete genome	323604-323633	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250025	Prevotella phage Lak-B6, complete genome	319192-319221	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250022	Prevotella phage Lak-B3, complete genome	319207-319236	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250027	Prevotella phage Lak-B8, complete genome	322296-322325	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250026	Prevotella phage Lak-B7, complete genome	321354-321383	7	0.767
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK250020	Prevotella phage Lak-B1, complete genome	320873-320902	7	0.767
LR134491_5	5.1\|1485559\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485559-1485590	32	NC_019538	Aeromonas phage CC2, complete genome	22566-22597	7	0.781
LR134491_5	5.11\|1486171\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486171-1486202	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	1000748-1000779	7	0.781
LR134491_5	5.20\|1486720\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486720-1486751	32	MK448727	Streptococcus phage Javan291, complete genome	26626-26657	7	0.781
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	NZ_AP019370	Silvanigrellales bacterium RF1110005 plasmid 68K, complete sequence	58962-58993	7	0.781
LR134491_3	3.6\|1381310\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381310-1381339	30	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	229531-229560	8	0.733
LR134491_3	3.7\|1381376\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381376-1381405	30	EU330206	Enterobacteria phage phiEco32, complete genome	9755-9784	8	0.733
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	181804-181833	8	0.733
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	83426-83455	8	0.733
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NC_031020	Morganella phage vB_MmoM_MP1, complete genome	70395-70424	8	0.733
LR134491_5	5.22\|1486842\|31\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486842-1486872	31	MG592458	Vibrio phage 1.083.O._10N.286.52.B9, partial genome	1360-1390	8	0.742
LR134491_5	5.26\|1487085\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487085-1487116	32	NZ_CP040462	Enterococcus sp. M190262 plasmid pM190262, complete sequence	41245-41276	8	0.75
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	NZ_LR214952	Mycoplasma neurolyticum strain NCTC10166 plasmid 2	515-546	8	0.75
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	NZ_CP039041	Piscirickettsia salmonis strain Psal-072 plasmid unnamed1, complete sequence	57985-58016	8	0.75
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	NZ_CP039048	Piscirickettsia salmonis strain Psal-073 plasmid unnamed2, complete sequence	99036-99067	8	0.75
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	AP013718	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S42-C114, * SEQUENCING IN PROGRESS *	20895-20926	8	0.75
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	MN693139	Marine virus AFVG_25M90, complete genome	39304-39335	8	0.75
LR134491_5	5.32\|1487451\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487451-1487482	32	MH533020	Acinetobacter phage ABPH49, complete genome	122162-122193	8	0.75
LR134491_5	5.33\|1487512\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487512-1487543	32	NZ_CP007741	Bacillus methanolicus MGA3 plasmid pBM19, complete sequence	1412-1443	8	0.75
LR134491_5	5.33\|1487512\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487512-1487543	32	MK215646	Bacillus phage vB_BthM-Goe5, complete genome	1973-2004	8	0.75
LR134491_5	5.33\|1487512\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487512-1487543	32	MK215646	Bacillus phage vB_BthM-Goe5, complete genome	157198-157229	8	0.75
LR134491_3	3.8\|1381442\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381442-1381471	30	MK977711	Streptomyces phage Evy, complete genome	45926-45955	9	0.7
LR134491_3	3.8\|1381442\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381442-1381471	30	KM652554	Streptomyces phage Jay2Jay, complete genome	46779-46808	9	0.7
LR134491_3	3.8\|1381442\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381442-1381471	30	MN369743	Streptomyces phage Tribute, complete genome	45502-45531	9	0.7
LR134491_3	3.8\|1381442\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381442-1381471	30	MF358541	Streptomyces phage Warpy, complete genome	46292-46321	9	0.7
LR134491_3	3.8\|1381442\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381442-1381471	30	MF358542	Streptomyces phage Sushi23, complete genome	46033-46062	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	AP014124	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C41-MedDCM-OCT-S34-C48, * SEQUENCING IN PROGRESS *	6036-6065	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	51264-51293	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	33045-33074	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP034238	Aliivibrio salmonicida strain VS224 plasmid pRVS1-224, complete sequence	75078-75107	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	38214-38243	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	38588-38617	9	0.7
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	37086-37115	9	0.7
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	MH617343	Inoviridae sp. isolate ctda12, complete genome	4722-4753	9	0.719
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NZ_CP038617	Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence	84518-84549	9	0.719
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NC_019909	Yersinia phage phiR1-RT complete genome	131481-131512	9	0.719
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	122242-122273	9	0.719
LR134491_5	5.3\|1485681\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485681-1485712	32	MH536823	Microbacterium phage Musetta, complete genome	44178-44209	9	0.719
LR134491_5	5.3\|1485681\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485681-1485712	32	MH371108	Microbacterium phage Fork, complete genome	43458-43489	9	0.719
LR134491_5	5.3\|1485681\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485681-1485712	32	MH371109	Microbacterium phage Lyell, complete genome	43657-43688	9	0.719
LR134491_5	5.3\|1485681\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485681-1485712	32	NZ_AP021860	Alteromonas sp. I4 plasmid pAltI4, complete sequence	13125-13156	9	0.719
LR134491_5	5.5\|1485804\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485804-1485835	32	NC_048047	Caulobacter phage CcrBL9, complete genome	189681-189712	9	0.719
LR134491_5	5.7\|1485927\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485927-1485958	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	865483-865514	9	0.719
LR134491_5	5.9\|1486049\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486049-1486080	32	KM659098	Sinorhizobium sp. LM21 plasmid pLM21S1, complete sequence	43659-43690	9	0.719
LR134491_5	5.14\|1486354\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486354-1486385	32	NZ_CP053742	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-ColYe4449, complete sequence	1701-1732	9	0.719
LR134491_5	5.16\|1486476\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486476-1486507	32	MT074138	Bacteroides phage DAC17, complete genome	47506-47537	9	0.719
LR134491_5	5.16\|1486476\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486476-1486507	32	MT074136	Bacteroides phage DAC15, complete genome	49171-49202	9	0.719
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	81501-81532	9	0.719
LR134491_5	5.27\|1487146\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487146-1487177	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	321798-321829	9	0.719
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MT001829	Salmonella phage SE_PL, complete genome	281718-281747	10	0.667
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK773491	Salmonella phage 7t3, complete genome	67018-67047	10	0.667
LR134491_3	3.10\|1381574\|30\|LR134491\|CRISPRCasFinder,CRT,PILER-CR	1381574-1381603	30	MK268344	Salmonella phage Munch, complete genome	3673-3702	10	0.667
LR134491_5	5.2\|1485620\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485620-1485651	32	MN694783	Marine virus AFVG_250M759, complete genome	25106-25137	10	0.688
LR134491_5	5.5\|1485804\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485804-1485835	32	MH588547	Caulobacter phage CcrSC, complete genome	189929-189960	10	0.688
LR134491_5	5.8\|1485988\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1485988-1486019	32	MG592647	Vibrio phage 1.278.O._10N.286.54.E8, partial genome	1473-1504	10	0.688
LR134491_5	5.15\|1486415\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486415-1486446	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	418152-418183	10	0.688
LR134491_5	5.19\|1486659\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486659-1486690	32	NC_048661	Clostridium phage CPS1, complete genome	14193-14224	10	0.688
LR134491_5	5.26\|1487085\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487085-1487116	32	MN694257	Marine virus AFVG_250M1016, complete genome	12326-12357	10	0.688
LR134491_5	5.32\|1487451\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487451-1487482	32	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	392109-392140	10	0.688
LR134491_5	5.17\|1486537\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1486537-1486568	32	NC_031908	Pseudoalteromonas phage PH1, complete genome	29789-29820	11	0.656
LR134491_5	5.33\|1487512\|32\|LR134491\|PILER-CR,CRISPRCasFinder,CRT	1487512-1487543	32	NZ_CP021671	Bacillus licheniformis strain SRCM100141 plasmid pBL141-1 sequence sequence	384-415	11	0.656

1. spacer 3.9|1381508|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NC_027120 (Lactococcus phage 1358, complete sequence) position: , mismatch: 5, identity: 0.833

ccaaaaacgtcgataaatgtatcaaaatca	CRISPR spacer
cgaaaaacgtcgataaaagtattaaaattc	Protospacer
* *************** ****.*****.

2. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041067 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence) position: , mismatch: 6, identity: 0.8

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atcgttttaaacctattttcaataaaagag	Protospacer
*** ******* ***********.  **.*

3. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_024215 (Lactococcus phage P078, complete genome) position: , mismatch: 6, identity: 0.812

--ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aactcat--ataaatcagcataagaaacattata	Protospacer
  *****  .******* *** ***********

4. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_024208 (Lactococcus phage P118, complete genome) position: , mismatch: 6, identity: 0.812

--ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aactcat--ataaatcagcataagaaacattata	Protospacer
  *****  .******* *** ***********

5. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_024214 (Lactococcus phage P162, complete genome) position: , mismatch: 6, identity: 0.812

--ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aactcat--ataaatcagcataagaaacattata	Protospacer
  *****  .******* *** ***********

6. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_024203 (Lactococcus phage P092, complete genome) position: , mismatch: 6, identity: 0.812

--ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aactcat--ataaatcagcataagaaacattata	Protospacer
  *****  .******* *** ***********

7. spacer 5.21|1486781|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MK448940 (Streptococcus phage Javan444, complete genome) position: , mismatch: 6, identity: 0.812

cttgacgctgttaacgctctgaaatcagccgg	CRISPR spacer
cttgacgctctgaacgctctgaaaggggcagg	Protospacer
********* * ************  .** **

8. spacer 5.21|1486781|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MK448932 (Streptococcus phage Javan42, complete genome) position: , mismatch: 6, identity: 0.812

cttgacgctgttaacgctctgaaatcagccgg	CRISPR spacer
cttgacgctttgaacgctctgaaaggggcagg	Protospacer
********* * ************  .** **

9. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 6, identity: 0.812

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
tttaataatttaattagtttatcaattaaatt	Protospacer
.***************.******** *  **.

10. spacer 5.33|1487512|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_048651 (Aeribacillus phage AP45, complete genome) position: , mismatch: 6, identity: 0.812

aaaataaaaactcttgaaaatcaagggttttt	CRISPR spacer
atttttaaaacccttgaaaatcaagggttttg	Protospacer
*   * *****.*******************

11. spacer 3.5|1381244|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK448885 (Streptococcus phage Javan252, complete genome) position: , mismatch: 7, identity: 0.767

aaagacattcaaactgctatccgcttgtta	CRISPR spacer
caagacattcaaacagctatccgcggtctt	Protospacer
 ************* *********   .*

12. spacer 3.8|1381442|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MN693504 (Marine virus AFVG_25M410, complete genome) position: , mismatch: 7, identity: 0.767

acatagttgcctgttaggtcaaaagcaata	CRISPR spacer
gcatagttgtctgtcaggtcaaaagagttt	Protospacer
.********.****.********** . *

13. spacer 3.9|1381508|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NC_047861 (Bordetella phage vB_BbrM_PHB04, complete genome) position: , mismatch: 7, identity: 0.767

ccaaaaacgtcgataaatgtatcaaaatca	CRISPR spacer
cttttcacgtcgatcaatgtctcaaaatca	Protospacer
*.    ******** ***** *********

14. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to CP016281 (Clostridium tyrobutyricum strain W428 plasmid pW428, complete sequence) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
agctttgtaaaactattttcaattactgct	Protospacer
* **** ****************  * *

15. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014171 (Clostridium tyrobutyricum strain KCTC 5387 plasmid pCTK01, complete sequence) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
agctttgtaaaactattttcaattactgct	Protospacer
* **** ****************  * *

16. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

17. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

18. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

19. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

20. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

21. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

22. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

23. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

24. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 7, identity: 0.767

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atatttttaaaattattttcaatacatgta	Protospacer
** *********.**********.*  * .

25. spacer 5.1|1485559|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_019538 (Aeromonas phage CC2, complete genome) position: , mismatch: 7, identity: 0.781

aaaaaacaaggtcacaaaacgtctttggataa---	CRISPR spacer
aaacaacaagctcacaaaacgtc---gtacaagcc	Protospacer
*** ****** ************   * *.**

26. spacer 5.11|1486171|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcaacaaggatttaacaatcttaaaaatcct	CRISPR spacer
ataaacaaggtttaaacaatcttaaaagtaca	Protospacer
 * ******* ** *************.* *

27. spacer 5.20|1486720|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MK448727 (Streptococcus phage Javan291, complete genome) position: , mismatch: 7, identity: 0.781

cataaaagacgcataaatatattcagcgtcat	CRISPR spacer
taaaaaagaagcataaatataatcagtatcct	Protospacer
.* ****** *********** ****..** *

28. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019370 (Silvanigrellales bacterium RF1110005 plasmid 68K, complete sequence) position: , mismatch: 7, identity: 0.781

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
tttgataatttaattattttatcaaaaatatt	Protospacer
.**.************ ********.  ***.

29. spacer 3.6|1381310|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaagccttgaaaactatcttttgtatca	CRISPR spacer
tgcaggccttgaaaactatcttgtaatttt	Protospacer
 ***.***************** *.  *.

30. spacer 3.7|1381376|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to EU330206 (Enterobacteria phage phiEco32, complete genome) position: , mismatch: 8, identity: 0.733

ccagtagctatccttgatgatatagtgcac	CRISPR spacer
ggaaaagctatccttgatgaaatagtagag	Protospacer
  *. *************** *****. *

31. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atttttttaacactattttcaattaattgt	Protospacer
**.******* ************     *

32. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 8, identity: 0.733

atctttttaaaactattttcaatgccaggg	CRISPR spacer
ctagacttaaaactatttttaatgccaaag	Protospacer
 *   .*************.*******..*

33. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NC_031020 (Morganella phage vB_MmoM_MP1, complete genome) position: , mismatch: 8, identity: 0.733

atctttttaaaactattttca-------atgccaggg	CRISPR spacer
atctttttaaaactagtttcatatagttat-------	Protospacer
*************** *****       **

34. spacer 5.22|1486842|31|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MG592458 (Vibrio phage 1.083.O._10N.286.52.B9, partial genome) position: , mismatch: 8, identity: 0.742

tgacacaaaaccaactatcagaacatgcagg	CRISPR spacer
tcaaacaaaacaaactaacagaacatgatca	Protospacer
* * ******* ***** *********   .

35. spacer 5.26|1487085|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040462 (Enterococcus sp. M190262 plasmid pM190262, complete sequence) position: , mismatch: 8, identity: 0.75

gaaataactgtcaatccgtttgtaccaatggt	CRISPR spacer
gaaatatgtgtcaatccgtttgtatctctacg	Protospacer
******  ****************.*  *.

36. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214952 (Mycoplasma neurolyticum strain NCTC10166 plasmid 2) position: , mismatch: 8, identity: 0.75

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
tacaaaggtttaattaatatatcaagtttttc	Protospacer
. .** ..********** ********** **

37. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039041 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
cgctcttttttaattaatttattaagtttatt	Protospacer
* .  *  **************.********.

38. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039048 (Piscirickettsia salmonis strain Psal-073 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
cgctcttttttaattaatttattaagtttatt	Protospacer
* .  *  **************.********.

39. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to AP013718 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S42-C114, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
aataataatttaactaatatatcaagtgatac	Protospacer
  ***********.**** ********    *

40. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MN693139 (Marine virus AFVG_25M90, complete genome) position: , mismatch: 8, identity: 0.75

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
tttaataatttaattaaattatcagatgcctt	Protospacer
.**************** ******..* . *.

41. spacer 5.32|1487451|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MH533020 (Acinetobacter phage ABPH49, complete genome) position: , mismatch: 8, identity: 0.75

-ggttacatctggcaagtcgacgctgacggcac	CRISPR spacer
ctgtca-atctgggaagtcgacgctgaaggtta	Protospacer
  **.* ****** ************* **.

42. spacer 5.33|1487512|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007741 (Bacillus methanolicus MGA3 plasmid pBM19, complete sequence) position: , mismatch: 8, identity: 0.75

aaaataaaaactcttgaaaatcaagggttttt	CRISPR spacer
taaatataaactattgaaaatcaatttgttct	Protospacer
 ***** ***** ***********    **.*

43. spacer 5.33|1487512|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 8, identity: 0.75

aaaataaaaactcttgaaaatcaagggttttt	CRISPR spacer
agtgtaaaaactcttgacaatcaatggagtct	Protospacer
*. .************* ****** **  *.*

44. spacer 5.33|1487512|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 8, identity: 0.75

aaaataaaaactcttgaaaatcaagggttttt	CRISPR spacer
agtgtaaaaactcttgacaatcaatggagtct	Protospacer
*. .************* ****** **  *.*

45. spacer 3.8|1381442|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK977711 (Streptomyces phage Evy, complete genome) position: , mismatch: 9, identity: 0.7

acatagttgcctgttaggtcaaaagcaata	CRISPR spacer
gagatgttgcctgtgaggtcaacagcaaat	Protospacer
. .  ********* ******* *****

46. spacer 3.8|1381442|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to KM652554 (Streptomyces phage Jay2Jay, complete genome) position: , mismatch: 9, identity: 0.7

acatagttgcctgttaggtcaaaagcaata	CRISPR spacer
gagatgttgcctgtaaggtcaacagcaaat	Protospacer
. .  ********* ******* *****

47. spacer 3.8|1381442|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MN369743 (Streptomyces phage Tribute, complete genome) position: , mismatch: 9, identity: 0.7

acatagttgcctgttaggtcaaaagcaata	CRISPR spacer
gagcggttgcctgtaaggtcaacagcaaat	Protospacer
. ...********* ******* *****

48. spacer 3.8|1381442|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MF358541 (Streptomyces phage Warpy, complete genome) position: , mismatch: 9, identity: 0.7

acatagttgcctgttaggtcaaaagcaata	CRISPR spacer
gagacgttgcctgtaaggtcaacagcaaat	Protospacer
. .  ********* ******* *****

49. spacer 3.8|1381442|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MF358542 (Streptomyces phage Sushi23, complete genome) position: , mismatch: 9, identity: 0.7

acatagttgcctgttaggtcaaaagcaata	CRISPR spacer
gagcggttgcctgtaaggtcaacagcaaat	Protospacer
. ...********* ******* *****

50. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to AP014124 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C41-MedDCM-OCT-S34-C48, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
atttttttaaaactattttcaacaattctt	Protospacer
**.*******************.. .

51. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
ttctttttaaacctattttcaaaagtttga	Protospacer
 ********** ********** . .  *.

52. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
ttctttttaaacctattttcaaaagtttga	Protospacer
 ********** ********** . .  *.

53. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034238 (Aliivibrio salmonicida strain VS224 plasmid pRVS1-224, complete sequence) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
gactttttaatactatttttaatgctcttt	Protospacer
. ******** ********.*****.

54. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
ttctttttaaacctattttcaaaagtttga	Protospacer
 ********** ********** . .  *.

55. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
ttctttttaaacctattttcaaaagtttga	Protospacer
 ********** ********** . .  *.

56. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.7

atctttttaaaactattttcaatgccaggg	CRISPR spacer
ttctttttaaacctattttcaaaagtttga	Protospacer
 ********** ********** . .  *.

57. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MH617343 (Inoviridae sp. isolate ctda12, complete genome) position: , mismatch: 9, identity: 0.719

ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aaaatctgtaaaccaccattagaaacaagagt	Protospacer
   *** *****.**************  * .

58. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 9, identity: 0.719

ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
ggcatcagtaaatcacaattacaaaatctcac	Protospacer
  ************** **** ***  .*  *

59. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 9, identity: 0.719

-----ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aaagcttc-----taaatcacctttaaaaacattatt	Protospacer
     .**     ********* ***.*********.

60. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 9, identity: 0.719

-----ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
aaagcttc-----taaatcacctttaaaaacattatt	Protospacer
     .**     ********* ***.*********.

61. spacer 5.3|1485681|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MH536823 (Microbacterium phage Musetta, complete genome) position: , mismatch: 9, identity: 0.719

atcatataaacctctgttttattgctcatttt	CRISPR spacer
tcgacgcgaacctctgctgtattgctcatttt	Protospacer
 . *....********.* *************

62. spacer 5.3|1485681|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MH371108 (Microbacterium phage Fork, complete genome) position: , mismatch: 9, identity: 0.719

atcatataaacctctgttttattgctcatttt	CRISPR spacer
tcgacgcgaacctctgctgtattgctcatttt	Protospacer
 . *....********.* *************

63. spacer 5.3|1485681|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MH371109 (Microbacterium phage Lyell, complete genome) position: , mismatch: 9, identity: 0.719

atcatataaacctctgttttattgctcatttt	CRISPR spacer
tcgacgcgaacctctgctgtattgctcatttt	Protospacer
 . *....********.* *************

64. spacer 5.3|1485681|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP021860 (Alteromonas sp. I4 plasmid pAltI4, complete sequence) position: , mismatch: 9, identity: 0.719

atcatataaacctctgttttattgctcatttt	CRISPR spacer
agagtattaacctctgttttaatgctcttaaa	Protospacer
*  .*** ************* ***** *

65. spacer 5.5|1485804|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 9, identity: 0.719

accgcatcagttggaacatctgcaacacggcc	CRISPR spacer
tctgcatcagttggatcgtctgcaacctgatg	Protospacer
 *.************ *.******** .*..

66. spacer 5.7|1485927|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.719

tgagtatcaatggcagcggtgcttcgatcgtt	CRISPR spacer
aggcgttggatggcagcggtgctccggtcgtt	Protospacer
 *.   * .**************.**.*****

67. spacer 5.9|1486049|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to KM659098 (Sinorhizobium sp. LM21 plasmid pLM21S1, complete sequence) position: , mismatch: 9, identity: 0.719

ttttgataagagctgatgtcgataaagtaatc	CRISPR spacer
tggcgatacgagccgatgtcgataaagcgggc	Protospacer
*  .**** ****.*************... *

68. spacer 5.14|1486354|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053742 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-ColYe4449, complete sequence) position: , mismatch: 9, identity: 0.719

ttaaaacaccactctttgcttgaacggatata	CRISPR spacer
ataaaacacctctctttgattgaatttttttt	Protospacer
 ********* ******* *****.   * *

69. spacer 5.16|1486476|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MT074138 (Bacteroides phage DAC17, complete genome) position: , mismatch: 9, identity: 0.719

tggctatgctaattttaaggtaggtgactact	CRISPR spacer
agcttatgctaattataagataggtgagtttc	Protospacer
 * .********** ****.******* * ..

70. spacer 5.16|1486476|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MT074136 (Bacteroides phage DAC15, complete genome) position: , mismatch: 9, identity: 0.719

tggctatgctaattttaaggtaggtgactact	CRISPR spacer
agcttatgctaattataagataggtgagtttc	Protospacer
 * .********** ****.******* * ..

71. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
attaataattgacttaatttatcaatcgaagg	Protospacer
 ********* * ************ .  *

72. spacer 5.27|1487146|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

cttaataatttaattaatttatcaagtttatc	CRISPR spacer
attaataattgacttaatttatcaatcgaagg	Protospacer
 ********* * ************ .  *

73. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MT001829 (Salmonella phage SE_PL, complete genome) position: , mismatch: 10, identity: 0.667

atctttttaaaactattttcaatgccaggg	CRISPR spacer
tactttttaaaactcttttcaatctttctt	Protospacer
  ************ ******** ..

74. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK773491 (Salmonella phage 7t3, complete genome) position: , mismatch: 10, identity: 0.667

atctttttaaaactattttcaatgccaggg	CRISPR spacer
tactttttaaaactcttttcaatctttctt	Protospacer
  ************ ******** ..

75. spacer 3.10|1381574|30|LR134491|CRISPRCasFinder,CRT,PILER-CR matches to MK268344 (Salmonella phage Munch, complete genome) position: , mismatch: 10, identity: 0.667

atctttttaaaactattttcaatgccaggg	CRISPR spacer
tactttttaaaactcttttcaatctttctt	Protospacer
  ************ ******** ..

76. spacer 5.2|1485620|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MN694783 (Marine virus AFVG_250M759, complete genome) position: , mismatch: 10, identity: 0.688

ctcatcagtaaatcaccattagaaacattatc	CRISPR spacer
tctaatgttaaatcaccacttgaaacattata	Protospacer
...* .. **********.* **********

77. spacer 5.5|1485804|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 10, identity: 0.688

accgcatcagttggaacatctgcaacacggcc	CRISPR spacer
tttgcatcagttggatcgtctgcaacctgatg	Protospacer
 ..************ *.******** .*..

78. spacer 5.8|1485988|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MG592647 (Vibrio phage 1.278.O._10N.286.54.E8, partial genome) position: , mismatch: 10, identity: 0.688

acaggagctaaggctcttgactttatcaagtc	CRISPR spacer
caaaacgccaaggctctagactttatcaaaat	Protospacer
  *.. **.******** ***********. .

79. spacer 5.15|1486415|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 10, identity: 0.688

aaacagtattaagtgcgagttatacaatgatc	CRISPR spacer
gttatgtattaagtgcaagttatacaattgat	Protospacer
.    ***********.*********** . .

80. spacer 5.19|1486659|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_048661 (Clostridium phage CPS1, complete genome) position: , mismatch: 10, identity: 0.688

aacactttcatctgttaggtttgacaagagtt	CRISPR spacer
aacactttcatcagttaggtgtggttcatatg	Protospacer
************ ******* **..  . .*

81. spacer 5.26|1487085|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to MN694257 (Marine virus AFVG_250M1016, complete genome) position: , mismatch: 10, identity: 0.688

gaaataactgtcaatccgtttgtaccaatggt	CRISPR spacer
actttaactggcaatccgtttctaccaaaacc	Protospacer
.   ****** ********** ****** . .

82. spacer 5.32|1487451|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 10, identity: 0.688

ggttacatctggcaagtcgacgctgacggcac	CRISPR spacer
gaacggatcgggcaagtcgacgctgatgggga	Protospacer
*. .. *** ****************.** .

83. spacer 5.17|1486537|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NC_031908 (Pseudoalteromonas phage PH1, complete genome) position: , mismatch: 11, identity: 0.656

tcatagatataagctgttttatccgatacatt	CRISPR spacer
tcatagatattagctgttctatctaggcttcg	Protospacer
********** *******.****...  . .

84. spacer 5.33|1487512|32|LR134491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021671 (Bacillus licheniformis strain SRCM100141 plasmid pBL141-1 sequence sequence) position: , mismatch: 11, identity: 0.656

aaaataaaaactcttgaaaatcaagggttttt	CRISPR spacer
gaaatgaaaactcttgaaaatgaaaaagcaaa	Protospacer
.****.*************** **... .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

33667 : 44106

Microbacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI59114.1\|33667_37393_+	putative phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.6e-35	25.4
VEI59115.1\|37527_38967_+	putative amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.1e-53	32.8
VEI59116.1\|39208_40234_+	phosphoribosylaminoimidazole synthetase	A0A1D7SE90	Cyanophage	8.1e-64	44.6
VEI59117.1\|40233_40785_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.4e-23	35.8
VEI59118.1\|40811_40988_+	Uncharacterised protein	NA	NA	NA	NA
VEI59119.1\|41195_42746_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.7e-73	47.2
VEI59120.1\|42957_44106_+	group B streptococcal surface immunogenic protein	A0A0E3XB61	Gordonia_phage	1.1e-11	37.6

DBSCAN-SWA_2

546708 : 556067

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI59591.1\|546708_548571_+	serine /threonine protein kinase	A0A1V0SDC3	Indivirus	6.9e-21	31.2
VEI59592.1\|548703_549399_+	membrane protein	NA	NA	NA	NA
VEI59593.1\|549395_550400_+	putative histidine kinase	NA	NA	NA	NA
VEI59594.1\|550392_551034_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	5.3e-05	35.2
VEI59595.1\|551077_552490_+	hydrolase	A0A076FI46	Aureococcus_anophage	9.6e-23	37.4
VEI59596.1\|552476_552854_+	putative polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
VEI59597.1\|553043_553970_-	cysteine synthetase A	A0A1X9I5F1	Streptococcus_phage	5.0e-137	79.3
VEI59598.1\|554064_554694_-	FIG000605: protein co-occurring with transport systems (COG1739)	A0A1X9I5T8	Streptococcus_phage	1.1e-63	59.7
VEI59599.1\|554765_556067_+	late competence protein	A0A1X9I5S6	Streptococcus_phage	1.5e-134	54.7

DBSCAN-SWA_3

641727 : 657021

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI59682.1\|641727_642492_+	branched-chain amino acid ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.3e-15	27.1
VEI59683.1\|642491_643202_+	putative branched chain amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-19	29.1
VEI59684.1\|643170_643392_+	Uncharacterised protein	NA	NA	NA	NA
VEI59685.1\|643454_644114_+	acetoin utilization protein, acetoin dehydrogenase	M1NSC5	Streptococcus_phage	6.0e-68	61.6
VEI59686.1\|644197_644836_+	thymidylate kinase	M1PSC7	Streptococcus_phage	6.6e-72	64.9
VEI59687.1\|644837_645725_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	8.5e-78	51.7
VEI59688.1\|645721_646138_+	signal peptidase II	NA	NA	NA	NA
VEI59689.1\|646094_646529_+	signal peptidase II	NA	NA	NA	NA
VEI59690.1\|646521_646854_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	4.7e-29	58.2
VEI59691.1\|646859_647726_+	putative methylase	M1PLC5	Streptococcus_phage	1.1e-114	72.1
VEI59692.1\|648089_648383_+	ammonium transporter	NA	NA	NA	NA
VEI59693.1\|648396_649326_+	ammonium transporter	NA	NA	NA	NA
VEI59694.1\|649342_649684_+	nitrogen regulatory protein PII	NA	NA	NA	NA
VEI59695.1\|649913_651005_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	1.1e-170	79.6
VEI59696.1\|651117_651648_+	GNAT family acetyltransferase	M1PSC3	Streptococcus_phage	1.9e-56	58.5
VEI59697.1\|651741_652935_+	D-3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	2.0e-178	79.6
VEI59698.1\|653084_653600_+	methylated-DNA--protein-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	9.7e-50	58.4
VEI59699.1\|653617_653971_+	arsenate reductase	M1PLC0	Streptococcus_phage	3.3e-41	68.7
VEI59700.1\|654038_654668_+	endonuclease III	NA	NA	NA	NA
VEI59701.1\|655113_655533_-	glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein	NA	NA	NA	NA
VEI59702.1\|655543_655921_-	lactoylglutathione lyase and related lyases	NA	NA	NA	NA
VEI59703.1\|656064_657021_-	putative exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	9.1e-118	74.4

DBSCAN-SWA_4

1052948 : 1062290

Bacillus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI60085.1\|1052948_1053776_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.6e-23	30.5
VEI60086.1\|1053783_1054572_+	membrane protein	NA	NA	NA	NA
VEI60087.1\|1055175_1055274_-	Uncharacterised protein	NA	NA	NA	NA
VEI60088.1\|1055353_1055842_-	7-cyano-7-deazaguanine reductase	E7DN65	Pneumococcus_phage	5.6e-47	58.6
VEI60089.1\|1055855_1056572_-	pyruvate-formate lyase-activating enzyme	A0A1U9WRB6	Streptococcus_virus	1.3e-60	47.3
VEI60090.1\|1056568_1057015_-	6-pyruvoyl-tetrahydropterin synthase	J9PV91	Bacillus_phage	2.9e-42	59.9
VEI60091.1\|1057014_1057668_-	ATPase, confers aluminum resistance	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.7e-60	53.8
VEI60092.1\|1058299_1058728_+	MarR family transcriptional regulator	NA	NA	NA	NA
VEI60093.1\|1058737_1060540_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-35	25.6
VEI60094.1\|1060529_1062290_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-43	27.5

DBSCAN-SWA_5

1604975 : 1613667

Staphylococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI60587.1\|1604975_1607135_+	ribonucleotide-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.2e-258	61.8
VEI60588.1\|1607595_1608561_+	ribonucleotide-diphosphate reductase, subunit beta	A0A096XT60	Enterococcus_phage	2.7e-125	69.5
VEI60589.1\|1608660_1609134_-	riboflavin synthase subunit beta	A0A2H4PQS3	Staphylococcus_phage	2.4e-39	52.0
VEI60590.1\|1609148_1610324_-	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein	A0A2H4PQS2	Staphylococcus_phage	5.8e-98	48.2
VEI60591.1\|1610316_1610925_-	riboflavin synthase (alpha subunit)	A0A2H4PQS5	Staphylococcus_phage	2.7e-30	36.5
VEI60592.1\|1610930_1611986_-	riboflavin-specific deaminase	A0A2H4PQS8	Staphylococcus_phage	4.9e-40	31.6
VEI60593.1\|1612536_1613667_-	acetylornithine aminotransferase	A0A1V0SKB7	Klosneuvirus	8.8e-27	27.9

DBSCAN-SWA_6

1898598 : 1960782

Streptococcus_phage(25.0%)

protease,transposase,bacteriocin,tRNA,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI60861.1\|1898598_1899801_+\|transposase	transposase	A0A1X9I619	Streptococcus_phage	3.5e-207	91.2
VEI60862.1\|1900174_1900738_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEI60863.1\|1901079_1902372_-	adenylosuccinate synthetase	L7Y4J5	Megavirus	1.6e-72	36.9
VEI60864.1\|1902695_1904963_+	putative glutamate-cysteine ligase	NA	NA	NA	NA
VEI60865.1\|1905166_1906117_-	carbamate kinase	NA	NA	NA	NA
VEI60866.1\|1906148_1907258_-	agmatine deiminase	M1I5R4	Acanthocystis_turfacea_Chlorella_virus	2.1e-102	48.4
VEI60867.1\|1907266_1908625_-	amino acid antiporter	NA	NA	NA	NA
VEI60868.1\|1908707_1909727_-	putrescine carbamoyltransferase	M1I6M4	Paramecium_bursaria_Chlorella_virus	4.8e-16	27.8
VEI60869.1\|1909965_1910922_+	putative transcriptional regulator	NA	NA	NA	NA
VEI60870.1\|1911024_1911627_-	nitroreductase family protein	NA	NA	NA	NA
VEI60871.1\|1911783_1912656_+	heat shock protein 33	NA	NA	NA	NA
VEI60872.1\|1912642_1913620_+\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
VEI60873.1\|1913712_1916190_-	beta-D-fructosyltransferase	NA	NA	NA	NA
VEI60874.1\|1916426_1918868_-\|protease	class III stress response-related ATP-dependent Clp protease, ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.6e-121	34.7
VEI60875.1\|1918864_1919329_-	transcriptional repressor CtsR	NA	NA	NA	NA
VEI60876.1\|1919691_1920732_-	elongation factor Ts	NA	NA	NA	NA
VEI60877.1\|1920846_1921632_-	30S ribosomal protein S2	NA	NA	NA	NA
VEI60878.1\|1921943_1922942_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VEI60879.1\|1923336_1923636_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
VEI60880.1\|1923628_1925281_-	coenzyme A disulfide reductase	NA	NA	NA	NA
VEI60881.1\|1925297_1925621_-	Rhodanese-related sulfurtransferase	NA	NA	NA	NA
VEI60882.1\|1925741_1926002_+	transcriptional repressor frmR	NA	NA	NA	NA
VEI60883.1\|1926449_1927331_-\|holin	choline binding protein J	NA	NA	NA	NA
VEI60884.1\|1927432_1928575_-	Glycerate kinase	W6LM47	Streptococcus_phage	4.2e-45	36.8
VEI60885.1\|1928595_1929507_-	dihydrodipicolinate synthase	NA	NA	NA	NA
VEI60886.1\|1929517_1930846_-	Glucarate dehydratase	NA	NA	NA	NA
VEI60887.1\|1930883_1932011_-	Mandelate racemase	NA	NA	NA	NA
VEI60888.1\|1932028_1933372_-	Glucarate dehydratase	NA	NA	NA	NA
VEI60889.1\|1933393_1934734_-	permease	NA	NA	NA	NA
VEI60890.1\|1935315_1936434_+	Sugar diacid utilization regulator SdaR	NA	NA	NA	NA
VEI60891.1\|1936560_1937400_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.9e-19	29.3
VEI60892.1\|1937541_1939437_-	peptidase	E3T4I7	Cafeteria_roenbergensis_virus	2.0e-71	30.1
VEI60893.1\|1939903_1940740_-	Abc2	W6JKT0	Anomala_cuprea_entomopoxvirus	3.2e-18	31.2
VEI60894.1\|1940741_1941410_-	Uncharacterised protein	NA	NA	NA	NA
VEI60895.1\|1941471_1941975_-	Uncharacterised protein	NA	NA	NA	NA
VEI60896.1\|1941976_1942615_-	Uncharacterised protein	NA	NA	NA	NA
VEI60897.1\|1942607_1943252_-	Abc1	W6JKT0	Anomala_cuprea_entomopoxvirus	4.0e-08	29.0
VEI60898.1\|1943309_1943444_-\|bacteriocin	Aureocin-like type II bacteriocin	NA	NA	NA	NA
VEI60899.1\|1943912_1944791_-	Positive transcriptional regulator, MutR family	NA	NA	NA	NA
VEI60900.1\|1944963_1946592_-	trehalose-6-phosphate hydrolase TreA	NA	NA	NA	NA
VEI60901.1\|1946684_1948655_-	PTS system trehalose-specific transporter subunits IIBCA	NA	NA	NA	NA
VEI60902.1\|1948833_1949547_+	transcriptional regulator	NA	NA	NA	NA
VEI60903.1\|1949922_1952706_-	dextranase precursor	NA	NA	NA	NA
VEI60904.1\|1953515_1953959_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
VEI60905.1\|1954100_1956323_-	stringent response protein	A0A1B1IUF0	uncultured_Mediterranean_phage	6.6e-10	37.0
VEI60906.1\|1956499_1957333_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEI60907.1\|1957470_1959654_-	PTS system, glucose-specific IIABC component	NA	NA	NA	NA
VEI60908.1\|1960041_1960782_+\|transposase	transposase IS1193D	A0A1S5SBP9	Streptococcus_phage	1.8e-68	53.9

DBSCAN-SWA_7

2075450 : 2087156

Staphylococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEI61017.1\|2075450_2076089_-	transglycosylase protein	Q4Z8Z7	Staphylococcus_phage	6.7e-24	86.2
VEI61018.1\|2076248_2077139_-	LysM repeat-containing protein	A0A288TY55	Enterococcus_phage	8.7e-22	78.8
VEI61019.1\|2077323_2078118_-	cobalt permease	NA	NA	NA	NA
VEI61020.1\|2078110_2078953_-	cobalt transporter ATP-binding subunit	A0A2H4PQG7	Staphylococcus_phage	7.0e-13	27.0
VEI61021.1\|2078928_2079771_-	cobalt transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	3.3e-23	32.3
VEI61022.1\|2079774_2080317_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
VEI61023.1\|2080328_2081312_-	membrane protein	NA	NA	NA	NA
VEI61024.1\|2081412_2082705_-	peptidase	A0A2H4UVM3	Bodo_saltans_virus	1.8e-07	26.7
VEI61025.1\|2082705_2083953_-	peptidase	A0A1X9I714	Streptococcus_phage	4.0e-97	44.2
VEI61026.1\|2084032_2084407_+	hypothetical cytosolic protein	A0A1X9I5V8	Streptococcus_phage	4.2e-18	61.3
VEI61027.1\|2084409_2085501_+	recombination protein F	NA	NA	NA	NA
VEI61028.1\|2085674_2087156_-	inositol-5-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.8e-95	39.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134491

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection