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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134489 Capnocytophaga sputigena strain NCTC11097 genome assembly, chromosome: 1 4 crisprs DEDDh,cas3,RT,cas9,PD-DExK,WYL 6 8 4 0

Results visualization

1. LR134489
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134489_3 1387714-1387884 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134489_4 1393579-1394164 Orphan NA
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134489_5 1440460-1441342 TypeII NA
11 spacers
cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134489_6 2087203-2087341 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
LR134489_3 3.2|1387786|27|LR134489|CRT 1387786-1387812 27 LR134489.1 1391533-1391559 1 0.963
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 LR134489.1 1407541-1407559 2 0.895
LR134489_3 3.1|1387741|18|LR134489|CRT 1387741-1387758 18 LR134489.1 1395569-1395586 2 0.889
LR134489_3 3.2|1387786|27|LR134489|CRT 1387786-1387812 27 LR134489.1 1411841-1411867 2 0.926
LR134489_3 3.2|1387786|27|LR134489|CRT 1387786-1387812 27 LR134489.1 1412454-1412480 2 0.926
LR134489_3 3.2|1387786|27|LR134489|CRT 1387786-1387812 27 LR134489.1 1412509-1412535 2 0.926
LR134489_3 3.3|1387840|18|LR134489|CRT 1387840-1387857 18 LR134489.1 1395569-1395586 2 0.889
LR134489_4 4.8|1393951|36|LR134489|CRT 1393951-1393986 36 LR134489.1 1391539-1391574 2 0.944
LR134489_4 4.10|1394061|27|LR134489|CRT 1394061-1394087 27 LR134489.1 1395575-1395601 2 0.926

1. spacer 3.2|1387786|27|LR134489|CRT matches to position: 1391533-1391559, mismatch: 1, identity: 0.963

tgaaacattcgtgtcaattcgtgtaat	CRISPR spacer
tgaaacattcgtgtcaattcgtgaaat	Protospacer
*********************** ***

2. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to position: 1407541-1407559, mismatch: 2, identity: 0.895

atttctcttttctctaaat	CRISPR spacer
atttcacctttctctaaat	Protospacer
***** *.***********

3. spacer 3.1|1387741|18|LR134489|CRT matches to position: 1395569-1395586, mismatch: 2, identity: 0.889

ctgaaatattcgtgcaat	CRISPR spacer
ctgatacattcgtgcaat	Protospacer
**** *.***********

4. spacer 3.2|1387786|27|LR134489|CRT matches to position: 1411841-1411867, mismatch: 2, identity: 0.926

tgaaacattcgtgtcaattcgtgtaat	CRISPR spacer
tgaaacattcgtgcaaattcgtgtaat	Protospacer
*************. ************

5. spacer 3.2|1387786|27|LR134489|CRT matches to position: 1412454-1412480, mismatch: 2, identity: 0.926

tgaaacattcgtgtcaattcgtgtaat	CRISPR spacer
tgaaacattcgtgtcaattcgtacaat	Protospacer
**********************..***

6. spacer 3.2|1387786|27|LR134489|CRT matches to position: 1412509-1412535, mismatch: 2, identity: 0.926

tgaaacattcgtgtcaattcgtgtaat	CRISPR spacer
tgaaacattcgtgtcaattcgtacaat	Protospacer
**********************..***

7. spacer 3.3|1387840|18|LR134489|CRT matches to position: 1395569-1395586, mismatch: 2, identity: 0.889

ctgaaacattcgtgaaat	CRISPR spacer
ctgatacattcgtgcaat	Protospacer
**** ********* ***

8. spacer 4.8|1393951|36|LR134489|CRT matches to position: 1391539-1391574, mismatch: 2, identity: 0.944

attcgtgccaattcgtgaaattcgtgggcgaacccc	CRISPR spacer
attcgtgtcaattcgtgaaattcgtgggcgaaaccc	Protospacer
*******.************************ ***

9. spacer 4.10|1394061|27|LR134489|CRT matches to position: 1395575-1395601, mismatch: 2, identity: 0.926

cattcgtgcaatccgtgggcaaaaccc	CRISPR spacer
cattcgtgcaattcgtgggcgaaaccc	Protospacer
************.*******.******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024320 Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence 17553-17571 0 1.0
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024354 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence 29201-29219 0 1.0
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024374 Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence 33384-33402 0 1.0
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024393 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence 14629-14647 0 1.0
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024208 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence 14667-14685 0 1.0
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024336 Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence 14814-14832 0 1.0
LR134489_2 2.3|320831|19|LR134489|CRISPRCasFinder 320831-320849 19 NZ_CP024355 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence 14667-14685 0 1.0
LR134489_5 5.9|1441115|30|LR134489|CRISPRCasFinder,PILER-CR 1441115-1441144 30 NZ_CP027230 Capnocytophaga sp. oral taxon 878 strain F0545 plasmid unnamed1, complete sequence 9473-9502 2 0.933
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 2477749-2477778 5 0.833
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NZ_CP020744 Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence 372839-372868 5 0.833
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NZ_CP028164 Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence 9512-9541 6 0.8
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NZ_KU521355 Staphylococcus aureus subsp. aureus strain M12/0145 plasmid pSAM12-0145 clone ST22, complete sequence 21881-21910 6 0.8
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_021076 Staphylococcus aureus strain 004-737X plasmid pSA737, complete sequence 19577-19606 6 0.8
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_014023 Bacillus megaterium QM B1551 plasmid pBM700, complete sequence 151881-151910 6 0.8
LR134489_5 5.2|1440583|30|LR134489|CRISPRCasFinder 1440583-1440612 30 NZ_CP010024 Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence 390217-390246 7 0.767
LR134489_5 5.2|1440583|30|LR134489|CRISPRCasFinder 1440583-1440612 30 NC_013793 Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence 92077-92106 7 0.767
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 MF448557 Lactococcus phage 37201, complete genome 27995-28024 7 0.767
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_048010 Salmonella phage S132, complete genome 59232-59261 7 0.767
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_041832 Campylobacter phage vB_CcoM-IBB_35 clone Contig4, complete sequence 9630-9659 7 0.767
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 MK408758 Campylobacter phage CP20, complete genome 131997-132026 7 0.767
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 FN667789 Campylobacter phage CPt10, complete genome 132191-132220 7 0.767
LR134489_5 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR 1441267-1441296 30 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 40465-40494 7 0.767
LR134489_5 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR 1441267-1441296 30 NZ_CP035229 Bacillus licheniformis strain SRCM103529 plasmid unnamed1, complete sequence 20250-20279 7 0.767
LR134489_5 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR 1441267-1441296 30 NZ_CP022288 Bacillus subtilis strain SX01705 plasmid pSX01705-1, complete sequence 65075-65104 7 0.767
LR134489_5 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR 1441267-1441296 30 MT773555 Myoviridae sp. isolate BML_3 genomic sequence 138253-138282 7 0.767
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 MN694566 Marine virus AFVG_250M779, complete genome 30167-30196 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 469225-469254 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NZ_AP018408 Lactobacillus plantarum strain SN35N plasmid pSN35N-3, complete sequence 12366-12395 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_002111 Riemerella anatipestifer 10 plasmid pCFC1, complete sequence 2625-2654 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NZ_CP009317 Bacillus cereus 03BB102 plasmid unnamed, complete sequence 61030-61059 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 KY806579 Riemerella anatipestifer strain RA-JX plasmid JX, complete sequence 5375-5404 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 KF669663 Bacillus phage Staley, complete genome 79889-79918 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 MK504443 Lactobacillus phage 521B, complete genome 9655-9684 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 MK504446 Lactobacillus phage SAC12B, complete genome 7838-7867 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 MN693940 Marine virus AFVG_250M588, complete genome 37227-37256 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_012473 Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence 75864-75893 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 KC465899 Pelagibacter phage HTVC008M, complete genome 54887-54916 8 0.733
LR134489_5 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR 1441267-1441296 30 KU878088 Bacillus phage AR9, complete genome 20357-20386 8 0.733
LR134489_5 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR 1441267-1441296 30 MF360957 Bacillus virus PBS1, complete genome 180905-180934 8 0.733
LR134489_5 5.4|1440735|30|LR134489|CRISPRCasFinder 1440735-1440764 30 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 672247-672276 9 0.7
LR134489_5 5.6|1440887|30|LR134489|CRISPRCasFinder,PILER-CR 1440887-1440916 30 NZ_CP019362 Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence 1177-1206 9 0.7
LR134489_5 5.6|1440887|30|LR134489|CRISPRCasFinder,PILER-CR 1440887-1440916 30 NZ_CP019369 Borrelia turicatae 91E135 isolate Oz1 plasmid lpU43, complete sequence 35293-35322 9 0.7
LR134489_5 5.7|1440963|30|LR134489|CRISPRCasFinder,PILER-CR 1440963-1440992 30 NZ_LN614828 Legionella fallonii LLAP-10 plasmid II, complete sequence 153638-153667 9 0.7
LR134489_5 5.20|1441101|44|LR134489|CRT 1441101-1441144 44 NZ_CP027230 Capnocytophaga sp. oral taxon 878 strain F0545 plasmid unnamed1, complete sequence 9459-9502 10 0.773

1. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024320 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

2. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024354 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

3. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024374 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

4. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024393 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

5. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024208 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

6. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024336 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

7. spacer 2.3|320831|19|LR134489|CRISPRCasFinder matches to NZ_CP024355 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence) position: , mismatch: 0, identity: 1.0

atttctcttttctctaaat	CRISPR spacer
atttctcttttctctaaat	Protospacer
*******************

8. spacer 5.9|1441115|30|LR134489|CRISPRCasFinder,PILER-CR matches to NZ_CP027230 (Capnocytophaga sp. oral taxon 878 strain F0545 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.933

ataatacagtcgtatcttacagcagactac	CRISPR spacer
ataatacagtcgtatcttacggctgactac	Protospacer
********************.** ******

9. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.833

taggtagaaaaaacaataaaaaga-atatga	CRISPR spacer
taggtagaaaacacagtaaaaagatgtacg-	Protospacer
*********** ***.******** .**.* 

10. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

taggtagaaaaaacaataaa--aagaatatga	CRISPR spacer
taggtacaaaaaacaataaaacaggagtat--	Protospacer
****** *************  *.**.***  

11. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NZ_CP028164 (Staphylococcus aureus strain CFSAN064038 plasmid pGMI17-006, complete sequence) position: , mismatch: 6, identity: 0.8

taggtag-aaaaaacaataaaaagaatatga	CRISPR spacer
-acataataaaagacaataaaaagaatatgt	Protospacer
 * .**. ****.***************** 

12. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NZ_KU521355 (Staphylococcus aureus subsp. aureus strain M12/0145 plasmid pSAM12-0145 clone ST22, complete sequence) position: , mismatch: 6, identity: 0.8

taggtag-aaaaaacaataaaaagaatatga	CRISPR spacer
-acataataaaagacaataaaaagaatatgt	Protospacer
 * .**. ****.***************** 

13. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_021076 (Staphylococcus aureus strain 004-737X plasmid pSA737, complete sequence) position: , mismatch: 6, identity: 0.8

taggtag-aaaaaacaataaaaagaatatga	CRISPR spacer
-acataataaaagacaataaaaagaatatgt	Protospacer
 * .**. ****.***************** 

14. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_014023 (Bacillus megaterium QM B1551 plasmid pBM700, complete sequence) position: , mismatch: 6, identity: 0.8

-taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
gtagatgaagaaaa-aataaaaagaatatgc	Protospacer
 ***.*..*.**** *************** 

15. spacer 5.2|1440583|30|LR134489|CRISPRCasFinder matches to NZ_CP010024 (Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence) position: , mismatch: 7, identity: 0.767

cctgaaccctgatgacgatgcaaaattatt	CRISPR spacer
cctgaaccttgatgacgatgcagcagatgt	Protospacer
********.*************. *    *

16. spacer 5.2|1440583|30|LR134489|CRISPRCasFinder matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 7, identity: 0.767

cctgaaccctgatgacgatgcaaaattatt	CRISPR spacer
attgaaccctgatgacgatgaaagtgaatt	Protospacer
 .****************** **.   ***

17. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to MF448557 (Lactococcus phage 37201, complete genome) position: , mismatch: 7, identity: 0.767

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
atgaaagaaaaaaaaataaaaagaataaaa	Protospacer
  *. ******** ************* .*

18. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_048010 (Salmonella phage S132, complete genome) position: , mismatch: 7, identity: 0.767

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aaaatagaaaaaccaataaaaacaatatat	Protospacer
 *..******** ********* *****. 

19. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_041832 (Campylobacter phage vB_CcoM-IBB_35 clone Contig4, complete sequence) position: , mismatch: 7, identity: 0.767

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aagtcaattaaaacaattaaaagaatatga	Protospacer
 ** .*.  ******** ************

20. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to MK408758 (Campylobacter phage CP20, complete genome) position: , mismatch: 7, identity: 0.767

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aagtcaattaaaacaattaaaagaatatga	Protospacer
 ** .*.  ******** ************

21. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to FN667789 (Campylobacter phage CPt10, complete genome) position: , mismatch: 7, identity: 0.767

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aagtcaattaaaacaattaaaagaatatga	Protospacer
 ** .*.  ******** ************

22. spacer 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.767

gaaaaggcaaaattattaacggaaaattta	CRISPR spacer
acaaaggcaaaattattaactgaaaaaggt	Protospacer
. ****************** *****    

23. spacer 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR matches to NZ_CP035229 (Bacillus licheniformis strain SRCM103529 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gaaaaggcaaaattattaacggaaaattta	CRISPR spacer
ttagaggcaaaattattaaaggaaaagaaa	Protospacer
  *.*************** ******   *

24. spacer 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR matches to NZ_CP022288 (Bacillus subtilis strain SX01705 plasmid pSX01705-1, complete sequence) position: , mismatch: 7, identity: 0.767

gaaaaggcaaaattattaacggaaaattta	CRISPR spacer
ttagaggcaaaattattaaaggaaaagaaa	Protospacer
  *.*************** ******   *

25. spacer 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 7, identity: 0.767

gaaaaggcaaaattattaacggaaaattta	CRISPR spacer
gtaaaggaaaagttattaacggaaaaggag	Protospacer
* ***** ***.**************   .

26. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to MN694566 (Marine virus AFVG_250M779, complete genome) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
ataataaaaaaaaaaataaaaagaatatat	Protospacer
  ..**.****** **************. 

27. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
gaggtagaaaaaagaataaaaagttcagat	Protospacer
 ************ *********  .* . 

28. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NZ_AP018408 (Lactobacillus plantarum strain SN35N plasmid pSN35N-3, complete sequence) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
actttagaaaaagcaataaaaagaattcca	Protospacer
    ********.************* . *

29. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_002111 (Riemerella anatipestifer 10 plasmid pCFC1, complete sequence) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aatccagaaagaaccataaaaagaatatct	Protospacer
 *  .*****.*** *************  

30. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NZ_CP009317 (Bacillus cereus 03BB102 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aaaacggaaagaaaaataaaaagaatatgc	Protospacer
 *....****.** *************** 

31. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to KY806579 (Riemerella anatipestifer strain RA-JX plasmid JX, complete sequence) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aatccagaaagaaccataaaaagaatatct	Protospacer
 *  .*****.*** *************  

32. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to KF669663 (Bacillus phage Staley, complete genome) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
tagttagaaaaaaccataaaaagggagttt	Protospacer
*** ********** ********.. .*  

33. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to MK504443 (Lactobacillus phage 521B, complete genome) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
ttattagaaaaaataataaaaataatagtg	Protospacer
* . *********.******** ****  .

34. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to MK504446 (Lactobacillus phage SAC12B, complete genome) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
ttattagaaaaaataataaaaataatagtg	Protospacer
* . *********.******** ****  .

35. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to MN693940 (Marine virus AFVG_250M588, complete genome) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
tttcaagaaaaaacaataaaataaatatat	Protospacer
*    **************** .*****. 

36. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_012473 (Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aaaacggaaagaaaaataaaaagaatatgc	Protospacer
 *....****.** *************** 

37. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to KC465899 (Pelagibacter phage HTVC008M, complete genome) position: , mismatch: 8, identity: 0.733

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
attaaagaaaaaacaataaggagaatataa	Protospacer
   . **************..*******.*

38. spacer 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 8, identity: 0.733

gaaaaggcaaaattattaacggaaaattta	CRISPR spacer
agtacagcaaaattattaaaggaaaattat	Protospacer
.. * .************* ********  

39. spacer 5.11|1441267|30|LR134489|CRISPRCasFinder,PILER-CR matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 8, identity: 0.733

gaaaaggcaaaattattaacggaaaattta	CRISPR spacer
agtacagcaaaattattaaaggaaaattat	Protospacer
.. * .************* ********  

40. spacer 5.4|1440735|30|LR134489|CRISPRCasFinder matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 9, identity: 0.7

taggtagaaaaaacaataaaaagaatatga	CRISPR spacer
aaaaatatgaaaataataaaaagaatatga	Protospacer
 *..  . .****.****************

41. spacer 5.6|1440887|30|LR134489|CRISPRCasFinder,PILER-CR matches to NZ_CP019362 (Borrelia turicatae 91E135 isolate Oz1 plasmid cp31, complete sequence) position: , mismatch: 9, identity: 0.7

ctctccgagatatgagtttccttgaaatta	CRISPR spacer
tagagcgagatatgagattacttgaaatgt	Protospacer
.    *********** ** ********  

42. spacer 5.6|1440887|30|LR134489|CRISPRCasFinder,PILER-CR matches to NZ_CP019369 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpU43, complete sequence) position: , mismatch: 9, identity: 0.7

ctctccgagatatgagtttccttgaaatta	CRISPR spacer
tagagcgagatatgagattacttgaaatgt	Protospacer
.    *********** ** ********  

43. spacer 5.7|1440963|30|LR134489|CRISPRCasFinder,PILER-CR matches to NZ_LN614828 (Legionella fallonii LLAP-10 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.7

taagagagttttccaaagcagtccaacgct	CRISPR spacer
ccccttggtttaccaaagcagtccaaggct	Protospacer
.     .**** ************** ***

44. spacer 5.20|1441101|44|LR134489|CRT matches to NZ_CP027230 (Capnocytophaga sp. oral taxon 878 strain F0545 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.773

tgattgataacaacataatacagtcgtatcttacagcagactac	CRISPR spacer
gtatgaaaagatacataatacagtcgtatcttacggctgactac	Protospacer
  ** .* *.  **********************.** ******

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 254523 : 261908 10 Riemerella_phage(33.33%) NA NA
DBSCAN-SWA_2 1264014 : 1292758 34 Riemerella_phage(64.71%) portal,terminase,holin NA
DBSCAN-SWA_3 1295941 : 1305357 14 Riemerella_phage(25.0%) NA NA
DBSCAN-SWA_4 1422012 : 1429098 9 Only_Syngen_Nebraska_virus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage