CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134529	Bartonella vinsonii strain NCTC12905 genome assembly, chromosome: 1	0 crisprs	csa3	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

547187 : 614069

Ochrobactrum_phage(30.56%)

transposase,plate,integrase,tRNA,tail

attL 538516:538532|attR 606981:606997

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
538516:538532	attL	NA	NA	NA	NA
VEJ44856.1\|547187_550109_+\|tRNA	Isoleucine--tRNA ligase	A0A2P1ELB8	Moumouvirus	3.0e-63	26.5
VEJ44857.1\|550303_550831_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44858.1\|550938_551391_-\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
VEJ44859.1\|551652_553056_+	Ribosomal large subunit pseudouridine synthase B	NA	NA	NA	NA
VEJ44860.1\|553036_553594_+	Ribosomal RNA small subunit methyltransferase D	NA	NA	NA	NA
VEJ44861.1\|553755_554604_+	Transketolase 2	A0A0P0YMZ3	Yellowstone_lake_phycodnavirus	7.8e-12	37.0
VEJ44862.1\|554606_555566_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
VEJ44863.1\|555728_556880_-	L-lactate dehydrogenase [cytochrome]	NA	NA	NA	NA
VEJ44864.1\|557297_558386_-	2'-deoxycytidine 5'-triphosphate deaminase	NA	NA	NA	NA
VEJ44865.1\|558675_560517_+	DNA mismatch repair protein mutL	A0A1B2LRQ5	Wolbachia_phage	1.3e-109	39.0
VEJ44866.1\|560631_560868_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEJ44867.1\|560896_561916_-	Tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
VEJ44868.1\|561905_563228_-	3-deoxy-D-manno-octulosonic-acid transferase	NA	NA	NA	NA
VEJ44869.1\|563931_564177_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44870.1\|564222_565026_-	Histidinol-phosphatase	NA	NA	NA	NA
VEJ44871.1\|565012_566344_-	peptidase PmbA	NA	NA	NA	NA
VEJ44872.1\|566764_567232_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44873.1\|567456_567918_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44874.1\|568798_569164_-	Helix-turn-helix	A0A219VHC1	Ochrobactrum_phage	2.3e-13	41.9
VEJ44875.1\|569309_569603_+	Predicted transcriptional regulator	A0A219VHB8	Ochrobactrum_phage	2.5e-18	64.0
VEJ44876.1\|569676_569817_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44877.1\|569800_570199_+	Uncharacterised protein	A0A219VHC3	Ochrobactrum_phage	1.8e-27	54.8
VEJ44878.1\|570198_571083_+	Nucleoid occlusion protein	A0A219VHB6	Ochrobactrum_phage	8.5e-70	50.0
VEJ44879.1\|571079_571538_+	Uncharacterised protein	A0A219VHC5	Ochrobactrum_phage	2.5e-41	60.7
VEJ44880.1\|571534_573514_+\|transposase	Bacteriophage Mu transposase	A0A219VHD4	Ochrobactrum_phage	4.0e-160	59.2
VEJ44881.1\|573825_574827_+	Mu B transposition protein, C terminal	A0A219VHC7	Ochrobactrum_phage	6.9e-84	52.1
VEJ44882.1\|574856_575138_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44883.1\|575134_575287_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44884.1\|575393_575603_+	Protein of uncharacterised function (DUF3164)	A0A1B0T6L8	Pelagibaca_phage	1.6e-06	61.4
VEJ44885.1\|575755_576751_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44886.1\|576743_576962_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44887.1\|576958_578164_+	ATP-grasp domain	NA	NA	NA	NA
VEJ44888.1\|578187_578904_+	Uncharacterized conserved protein	NA	NA	NA	NA
VEJ44889.1\|578896_579226_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44890.1\|579317_579548_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44891.1\|579908_582206_+\|tail	Phage-related minor tail protein	A0A219VHB3	Ochrobactrum_phage	7.0e-116	50.6
VEJ44892.1\|582236_582581_+	Phage protein U	A0A219VHA8	Ochrobactrum_phage	3.5e-19	47.6
VEJ44893.1\|582695_582950_+	Phage Tail Protein X	NA	NA	NA	NA
VEJ44894.1\|582949_583942_+	Phage protein D	A0A219VHA9	Ochrobactrum_phage	1.5e-86	50.9
VEJ44895.1\|584082_584181_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44896.1\|586003_587161_+\|integrase	Prophage CP4-57 integrase	A0A1X9HVL9	Ruegeria_phage	5.2e-75	39.3
VEJ44897.1\|587206_589270_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44898.1\|589536_589749_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44899.1\|589880_590108_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44900.1\|590104_590767_-	Phage-related lysozyme (muraminidase)	A0A141GEY9	Brucella_phage	3.8e-46	60.4
VEJ44901.1\|590999_591908_+	EcoRII C terminal	NA	NA	NA	NA
VEJ44902.1\|591909_592836_+	DNA-cytosine methyltransferase	Q6DMX0	Streptococcus_phage	9.8e-109	64.4
VEJ44903.1\|592921_594226_-	Phage protein D	K4HZC6	Acidithiobacillus_phage	5.3e-68	38.0
VEJ44904.1\|594222_594447_-	Phage Tail Protein X	A0A2H4J946	uncultured_Caudovirales_phage	3.7e-06	51.0
VEJ44905.1\|594443_594824_-	Phage protein U	A0A1W6JT48	Escherichia_phage	9.1e-21	42.3
VEJ44906.1\|594829_596896_-\|tail	Phage-related minor tail protein	A0A2I5ARC1	Synechococcus_phage	3.8e-12	27.4
VEJ44907.1\|597002_597290_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44908.1\|597292_597799_-\|tail	phage major tail tube protein	K4I1G5	Acidithiobacillus_phage	3.8e-30	40.4
VEJ44909.1\|597798_599190_-\|tail	Phage tail sheath protein	A0A088FVH5	Escherichia_phage	2.1e-131	52.9
VEJ44910.1\|599324_599834_+	Uncharacterized phage-encoded protein	A0A192Y918	Salmonella_phage	5.0e-22	57.6
VEJ44911.1\|599906_600236_-	Plasmid maintenance system antidote protein	NA	NA	NA	NA
VEJ44912.1\|600313_600520_+	Predicted transcription regulator containing HTH domain	A0A222YXG1	Escherichia_phage	6.0e-19	64.7
VEJ44913.1\|600642_600921_+	Toxin higB-1	A0A0M3LQB1	Mannheimia_phage	4.0e-18	47.8
VEJ44914.1\|600938_601226_+	Uncharacterized HTH-type transcriptional regulator YddM	A0A0M3LPV0	Mannheimia_phage	6.9e-13	42.7
VEJ44915.1\|601314_602784_-\|tail	Phage tail repeat like	NA	NA	NA	NA
VEJ44916.1\|602797_605941_-	Uncharacterised protein	K4ICQ5	Acidithiobacillus_phage	1.8e-154	34.2
VEJ44917.1\|605942_607061_-\|tail	Phage tail protein (Tail_P2_I)	K4I1F8	Acidithiobacillus_phage	4.6e-20	37.1
606981:606997	attR	NA	NA	NA	NA
VEJ44918.1\|607060_607888_-	Uncharacterized homolog of phage Mu protein gp47	A0A219VH98	Ochrobactrum_phage	3.6e-38	32.7
VEJ44919.1\|607884_608226_-	Gene 25-like lysozyme	Q75QM0	Wolbachia_phage	1.9e-30	58.7
VEJ44920.1\|608222_608912_-\|plate	Phage P2 baseplate assembly protein gpV	K4HZZ9	Acidithiobacillus_phage	8.8e-22	33.8
VEJ44921.1\|608892_609441_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44922.1\|609560_609887_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44923.1\|609916_610357_-	Uncharacterised protein	A0A0A8ILA9	Aurantimonas_phage	3.1e-12	33.8
VEJ44924.1\|610343_610532_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44925.1\|610736_610826_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44926.1\|610851_611247_-	Uncharacterised protein family (UPF0150)	A0A0U4ISP5	Pseudomonas_phage	7.1e-08	36.5
VEJ44927.1\|611263_611443_-	YcfA-like protein	NA	NA	NA	NA
VEJ44928.1\|611511_612048_-	Uncharacterised protein	NA	NA	NA	NA
VEJ44929.1\|612059_612500_-	Helix-destabilizing protein	A0A0K1LLZ9	Caulobacter_phage	9.2e-33	60.0
VEJ44930.1\|612802_612994_+	Uncharacterised protein	NA	NA	NA	NA
VEJ44931.1\|613061_613490_+	Antitoxin HicB	NA	NA	NA	NA
VEJ44932.1\|613538_614069_-	Phage anti-repressor protein	Q7Y5W2	Haemophilus_phage	1.4e-27	59.3

DBSCAN-SWA_2

949002 : 960003

Rhizobium_phage(12.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ45222.1\|949002_950505_+\|tRNA	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	A0A076YQD0	Rhizobium_phage	2.5e-05	47.4
VEJ45223.1\|950691_951090_+	NADH dehydrogenase	NA	NA	NA	NA
VEJ45224.1\|951173_951578_+	Uncharacterized protein conserved in bacteria (DUF2155)	NA	NA	NA	NA
VEJ45225.1\|952149_952887_+	rhombosortase	NA	NA	NA	NA
VEJ45226.1\|952952_954023_-	site-specific tyrosine recombinase XerC	A0A291AUF0	Sinorhizobium_phage	1.4e-29	29.5
VEJ45227.1\|954003_954336_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45228.1\|954342_954966_-	putative phage-type endonuclease	A0A0U2BXF3	Paracoccus_phage	4.2e-47	44.9
VEJ45229.1\|954967_955729_-	ERF superfamily	Q9MC70	Pseudomonas_phage	1.1e-17	27.5
VEJ45230.1\|955849_956698_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	A0A0A7NU51	Lactobacillus_phage	5.4e-05	56.1
VEJ45231.1\|956729_957434_-	Uncharacterized phage-encoded protein	B5AX29	Iodobacteriophage	3.3e-24	37.4
VEJ45232.1\|957426_957861_-	Phage anti-repressor protein	A0A0U2QL80	Escherichia_phage	3.4e-19	39.6
VEJ45233.1\|957878_958244_-	Phage anti-repressor protein	NA	NA	NA	NA
VEJ45234.1\|958291_958702_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45235.1\|958920_959256_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45236.1\|959350_959698_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45237.1\|959694_960003_+	Uncharacterised protein	F8TV45	EBPR_siphovirus	3.0e-22	48.5

DBSCAN-SWA_3

965995 : 981008

Edwardsiella_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ45247.1\|965995_966745_+	Uncharacterized phage-encoded protein	B5AX29	Iodobacteriophage	1.4e-25	35.6
VEJ45248.1\|967206_967722_+	Uncharacterized phage-encoded protein	A0A159B6D5	Gordonia_phage	7.8e-23	50.0
VEJ45249.1\|967798_968566_+	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	A0A076G7L7	Bacillus_phage	7.3e-09	67.5
VEJ45250.1\|968932_969238_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VEJ45251.1\|969598_970039_+	Helix-destabilizing protein	A0A0K1LLZ9	Caulobacter_phage	4.1e-33	59.1
VEJ45252.1\|971077_971866_-	Uncharacterised protein	K4PWT3	Edwardsiella_phage	1.3e-08	55.0
VEJ45253.1\|971941_972436_-	Uncharacterised protein	A0A076G7L7	Bacillus_phage	4.7e-09	51.7
VEJ45254.1\|972520_973294_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	K4PXF0	Edwardsiella_phage	2.3e-10	56.4
VEJ45255.1\|973384_973894_-	Uncharacterised protein	K4Q356	Edwardsiella_phage	2.3e-11	56.9
VEJ45256.1\|973974_974574_-	UDP-N-acetylglucosamine acyltransferase	K4PXF0	Edwardsiella_phage	6.3e-08	52.8
VEJ45257.1\|976040_981008_-	Hef nuclease	A0A2H4UTW8	Bodo_saltans_virus	2.2e-42	27.0

DBSCAN-SWA_4

986830 : 1001021

Edwardsiella_phage(37.5%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ45265.1\|986830_987163_+	Uncharacterised protein	A0A088FAU1	Sulfitobacter_phage	4.5e-08	41.6
VEJ45266.1\|987143_988472_+\|terminase	phage terminase, large subunit, PBSX family	A0A088F6U9	Sulfitobacter_phage	1.1e-145	57.2
VEJ45267.1\|988456_990499_+	Uncharacterised protein	C5IHN8	Burkholderia_virus	3.8e-36	25.1
VEJ45268.1\|991090_991879_-	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	K4Q356	Edwardsiella_phage	3.7e-08	49.2
VEJ45269.1\|991957_992470_-	Uncharacterised protein	A0A076G7L7	Bacillus_phage	3.4e-10	54.4
VEJ45270.1\|992545_992968_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45271.1\|993024_993234_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45272.1\|993323_993833_-	Uncharacterised protein	K4Q356	Edwardsiella_phage	3.0e-11	55.2
VEJ45273.1\|993918_994710_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	K4PXF0	Edwardsiella_phage	1.4e-10	60.4
VEJ45274.1\|996059_1001021_-	type I restriction enzyme EcoKI subunit R	A0A2H4UTW8	Bodo_saltans_virus	1.7e-45	29.0

DBSCAN-SWA_5

1012710 : 1075641

Ochrobactrum_phage(63.27%)

transposase,plate,integrase,tRNA,tail,head

attL 1001650:1001665|attR 1072059:1072074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1001650:1001665	attL	NA	NA	NA	NA
VEJ45281.1\|1012710_1013877_-\|integrase	Prophage CP4-57 integrase	A0A088F800	Sulfitobacter_phage	4.0e-75	42.3
VEJ45282.1\|1013974_1015906_+	Uncharacterised protein	C5IHN8	Burkholderia_virus	3.9e-19	22.4
VEJ45283.1\|1015917_1016829_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45284.1\|1016926_1018072_+	Uncharacterised protein	A0A248SKT9	Klebsiella_phage	1.7e-33	30.2
VEJ45285.1\|1018091_1018559_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45286.1\|1018631_1019330_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45287.1\|1019329_1020787_+	Uncharacterised protein	D6PEY0	uncultured_phage	6.8e-40	27.1
VEJ45288.1\|1020828_1021212_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45289.1\|1021213_1022272_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45290.1\|1022271_1024107_+	Uncharacterised protein	C8CLJ2	Xylella_phage	3.9e-08	29.6
VEJ45291.1\|1024099_1026313_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45292.1\|1026312_1027305_+	Transglycosylase SLT domain	L7TQZ1	Rhizobium_phage	6.5e-26	45.7
VEJ45293.1\|1027297_1028278_+	Phage Tail Collar Domain	A0A291LA10	Bordetella_phage	1.9e-14	34.5
VEJ45294.1\|1028287_1028539_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45295.1\|1028552_1030301_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45296.1\|1030375_1030981_+	Phage-related lysozyme (muraminidase)	A0A141GEY9	Brucella_phage	3.1e-39	63.4
VEJ45297.1\|1030977_1031205_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45298.1\|1031336_1031555_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45299.1\|1031618_1031900_-	mRNA interferase YafQ	NA	NA	NA	NA
VEJ45300.1\|1031907_1032189_-	Antitoxin DinJ	NA	NA	NA	NA
VEJ45301.1\|1032818_1033346_-	Helix-turn-helix	A0A219VHC1	Ochrobactrum_phage	2.8e-20	38.3
VEJ45302.1\|1033492_1033786_+	Predicted transcriptional regulator	A0A219VHB8	Ochrobactrum_phage	7.8e-20	66.7
VEJ45303.1\|1033983_1034382_+	Uncharacterised protein	A0A219VHC3	Ochrobactrum_phage	4.7e-28	54.8
VEJ45304.1\|1034381_1035266_+	Nucleoid occlusion protein	A0A219VHB6	Ochrobactrum_phage	1.6e-71	49.7
VEJ45305.1\|1035262_1035721_+	Uncharacterised protein	A0A219VHC5	Ochrobactrum_phage	1.7e-42	63.9
VEJ45306.1\|1035717_1037697_+\|transposase	Bacteriophage Mu transposase	A0A219VHD4	Ochrobactrum_phage	4.7e-161	59.5
VEJ45307.1\|1038008_1039040_+	Mu B transposition protein, C terminal	A0A219VHC7	Ochrobactrum_phage	1.5e-89	53.1
VEJ45308.1\|1039036_1039321_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45309.1\|1039317_1039566_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45310.1\|1039580_1040204_+	Protein of uncharacterised function (DUF3164)	M4STB6	Rhodobacter_phage	5.1e-69	61.7
VEJ45311.1\|1040215_1040974_+	Protein of uncharacterised function (DUF3164)	M4STB6	Rhodobacter_phage	7.4e-46	44.2
VEJ45312.1\|1040982_1041600_+	Mu-like prophage protein gp16	A0A219VHC6	Ochrobactrum_phage	6.9e-42	42.1
VEJ45313.1\|1041606_1042014_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45314.1\|1042072_1042681_+	Predicted chitinase	A0A219VHE4	Ochrobactrum_phage	1.6e-43	52.2
VEJ45315.1\|1042677_1042965_+	Uncharacterised protein	A0A219VHD7	Ochrobactrum_phage	5.3e-13	56.1
VEJ45316.1\|1042957_1043296_+	Uncharacterised protein	A0A219VHE7	Ochrobactrum_phage	4.6e-08	45.2
VEJ45317.1\|1043261_1043504_+	Uncharacterised protein	A0A219VHE3	Ochrobactrum_phage	5.6e-08	50.9
VEJ45318.1\|1043500_1043815_+	Protein of uncharacterised function (DUF2730)	NA	NA	NA	NA
VEJ45319.1\|1043811_1044168_+	Uncharacterised protein	M4SPS4	Rhodobacter_phage	1.4e-18	46.9
VEJ45320.1\|1044130_1044712_+	Protein of uncharacterised function (DUF3486)	A0A219VH75	Ochrobactrum_phage	4.8e-37	49.0
VEJ45321.1\|1044704_1046327_+	Mu-like prophage FluMu protein gp28	A0A219VH72	Ochrobactrum_phage	3.3e-184	65.2
VEJ45322.1\|1046339_1047941_+	Mu-like prophage protein gp29	A0A219VH73	Ochrobactrum_phage	7.2e-176	56.9
VEJ45323.1\|1047933_1049139_+\|head	phage head morphogenesis protein, SPP1 gp7 family	A0A219VH74	Ochrobactrum_phage	3.9e-126	52.4
VEJ45324.1\|1049573_1050617_+	Mu-like prophage I protein	A0A219VH76	Ochrobactrum_phage	7.2e-68	43.0
VEJ45325.1\|1050613_1050955_+	Uncharacterised protein	A0A219VH82	Ochrobactrum_phage	2.8e-13	45.5
VEJ45326.1\|1050967_1051933_+	Uncharacterised protein	A0A219VH83	Ochrobactrum_phage	1.6e-109	61.8
VEJ45327.1\|1051950_1052373_+	Mu-like prophage protein gp36	A0A219VH93	Ochrobactrum_phage	4.3e-27	47.1
VEJ45328.1\|1052374_1052869_+	Mu-like prophage protein gpG	A0A219VH84	Ochrobactrum_phage	4.3e-39	56.5
VEJ45329.1\|1052865_1053387_+	Uncharacterised protein	A0A219VH99	Ochrobactrum_phage	6.4e-41	50.3
VEJ45330.1\|1053383_1053977_+\|plate	Phage P2 baseplate assembly protein gpV	NA	NA	NA	NA
VEJ45331.1\|1053988_1054171_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45332.1\|1054174_1054561_+	Gene 25-like lysozyme	A0A219VH96	Ochrobactrum_phage	8.4e-30	51.6
VEJ45333.1\|1054547_1055444_+	Uncharacterized homolog of phage Mu protein gp47	A0A219VH98	Ochrobactrum_phage	8.2e-44	35.1
VEJ45334.1\|1055443_1056574_+	Uncharacterised protein	A0A1B2LRQ8	Wolbachia_phage	1.1e-05	25.5
VEJ45335.1\|1056575_1059719_+	Uncharacterised protein	K4ICQ5	Acidithiobacillus_phage	1.4e-154	34.4
VEJ45336.1\|1059732_1061106_+\|tail	Phage tail repeat like	NA	NA	NA	NA
VEJ45337.1\|1061273_1062557_+\|tail	Phage tail sheath protein	A0A219VHA7	Ochrobactrum_phage	8.7e-148	61.2
VEJ45338.1\|1062560_1063079_+\|tail	Phage tail tube protein FII	A0A219VHB2	Ochrobactrum_phage	1.9e-61	64.1
VEJ45339.1\|1063088_1063499_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45340.1\|1063630_1065979_+\|tail	Phage-related minor tail protein	A0A219VHB3	Ochrobactrum_phage	8.8e-114	49.9
VEJ45341.1\|1066009_1066471_+	Phage protein U	A0A219VHA8	Ochrobactrum_phage	4.7e-27	45.0
VEJ45342.1\|1066467_1066722_+	Phage Tail Protein X	A0A219VHB0	Ochrobactrum_phage	7.2e-14	49.4
VEJ45343.1\|1066721_1067711_+	Phage protein D	A0A219VHA9	Ochrobactrum_phage	8.6e-87	51.2
VEJ45344.1\|1067851_1068673_+	Site-specific DNA methylase	A0A219VHB5	Ochrobactrum_phage	7.6e-89	62.6
VEJ45345.1\|1069886_1070768_+	RlpA-like protein precursor	F5B3X9	Synechococcus_phage	1.8e-19	53.9
VEJ45346.1\|1071102_1072266_+	D-alanyl-D-alanine carboxypeptidase dacC precursor	B6DZZ7	Stx2-converting_phage	3.5e-47	32.6
1072059:1072074	attR	NA	NA	NA	NA
VEJ45347.1\|1072296_1072968_+	Thymidylate kinase	M1PSC7	Streptococcus_phage	3.6e-28	37.4
VEJ45348.1\|1072964_1074020_+	DNA polymerase III subunit tau	S5WKH4	Pseudomonas_phage	6.3e-11	26.2
VEJ45349.1\|1074081_1075641_+\|tRNA	Methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.4e-99	40.3

DBSCAN-SWA_6

1242474 : 1253027

uncultured_Mediterranean_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ45495.1\|1242474_1243593_-\|tRNA	Queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.4e-98	52.7
VEJ45496.1\|1244622_1245138_-	Peptidyl-prolyl cis-trans isomerase B	A0A1B1IVS0	uncultured_Mediterranean_phage	1.1e-45	59.0
VEJ45497.1\|1245157_1245751_-	Peptidyl-prolyl cis-trans isomerase B	A0A1B1IVS0	uncultured_Mediterranean_phage	2.4e-44	58.0
VEJ45498.1\|1245740_1246259_-	Phosphopantetheine adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.2e-24	35.8
VEJ45499.1\|1246283_1249061_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.0e-105	34.7
VEJ45500.1\|1249279_1249792_-	Helix-destabilizing protein	A0A0K1LLZ9	Caulobacter_phage	3.8e-46	65.3
VEJ45501.1\|1250114_1253027_+	Excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	61.1

DBSCAN-SWA_7

1521793 : 1571201

Acidithiobacillus_phage(20.0%)

tail,portal,plate,integrase

attL 1521476:1521494|attR 1571219:1571237

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1521476:1521494	attL	NA	NA	NA	NA
VEJ45750.1\|1521793_1522417_-	putative phage-type endonuclease	A0A0U2BXF3	Paracoccus_phage	1.1e-44	44.1
VEJ45751.1\|1522418_1523213_-	ERF superfamily	A0A0M3ULL1	Bacillus_phage	2.9e-08	31.7
VEJ45752.1\|1523332_1524022_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A0A7NU51	Lactobacillus_phage	8.8e-06	58.5
VEJ45753.1\|1524027_1524492_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	K4Q356	Edwardsiella_phage	2.9e-08	56.6
VEJ45754.1\|1524503_1525247_-	Uncharacterized phage-encoded protein	B5AX29	Iodobacteriophage	8.3e-26	33.8
VEJ45755.1\|1525239_1525674_-	Phage anti-repressor protein	A0A0U2QL80	Escherichia_phage	1.6e-16	38.1
VEJ45756.1\|1525730_1526105_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45757.1\|1526513_1527569_-	Uncharacterized conserved protein	A0A1S5SAB0	Streptococcus_phage	5.4e-63	38.5
VEJ45758.1\|1527588_1528242_-	transcriptional regulator, y4mF family	A0A076G6G1	Sinorhizobium_phage	2.5e-50	55.3
VEJ45759.1\|1528336_1528612_+	Helix-turn-helix	NA	NA	NA	NA
VEJ45760.1\|1528711_1529077_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45761.1\|1529085_1529862_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45762.1\|1530031_1531177_+	Uncharacterized protein conserved in bacteria	A0A076GD06	Sinorhizobium_phage	2.6e-18	41.0
VEJ45763.1\|1531199_1531547_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45764.1\|1531729_1532077_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45765.1\|1532311_1532857_+	Phage anti-repressor protein	A0A0N6WET9	Escherichia_phage	2.6e-24	51.6
VEJ45766.1\|1532903_1533332_-	Antitoxin HicB	A0A0R6PJC0	Moraxella_phage	1.8e-12	34.8
VEJ45767.1\|1533399_1533591_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45768.1\|1533883_1534339_+	Helix-destabilizing protein	A0A0K1LLZ9	Caulobacter_phage	7.3e-33	59.1
VEJ45769.1\|1534350_1534893_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45770.1\|1534896_1535319_-	Antitoxin HicB	Q7Y3V7	Yersinia_phage	3.4e-16	37.9
VEJ45771.1\|1535339_1535591_-	YcfA-like protein	NA	NA	NA	NA
VEJ45772.1\|1535866_1536187_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45773.1\|1536190_1536775_+	Uncharacterised protein	A0A0A8IL87	Aurantimonas_phage	1.7e-10	28.8
VEJ45774.1\|1537568_1538285_+	Heat-labile enterotoxin IIB, A chain precursor	A0A0U2QV53	Escherichia_phage	6.8e-33	45.4
VEJ45775.1\|1538612_1538912_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45776.1\|1539316_1540057_+	Uncharacterized phage-encoded protein	B5AX29	Iodobacteriophage	9.1e-25	38.5
VEJ45777.1\|1540020_1540332_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45778.1\|1540377_1540674_-	Uncharacterized HTH-type transcriptional regulator ybaQ	M9MUN2	Rhodococcus_phage	9.3e-13	47.1
VEJ45779.1\|1540690_1541005_-	Toxin higB-1	A0A222YWE2	Escherichia_phage	1.2e-10	40.9
VEJ45780.1\|1541031_1541616_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45781.1\|1541605_1543552_+\|tail	Bacteriophage tail assembly protein	K4I3Y9	Acidithiobacillus_phage	3.5e-164	52.3
VEJ45782.1\|1543555_1543804_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45783.1\|1543803_1545348_+\|portal	phage portal protein, lambda family	K4I1F2	Acidithiobacillus_phage	8.7e-94	40.7
VEJ45784.1\|1545337_1546417_+	Protease 4	K4HZZ6	Acidithiobacillus_phage	9.1e-66	50.0
VEJ45785.1\|1546413_1546680_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45786.1\|1546676_1547045_+	Uncharacterised protein	Q6VT10	Vibrio_phage	3.1e-05	42.3
VEJ45787.1\|1547057_1548134_+	Uncharacterised protein	A0A0A8ILA9	Aurantimonas_phage	6.5e-56	34.7
VEJ45788.1\|1548135_1548489_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45789.1\|1548827_1549565_+	Phage anti-repressor protein	Q7Y5W2	Haemophilus_phage	1.3e-39	36.9
VEJ45790.1\|1549528_1549840_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45791.1\|1549915_1550233_-	Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters	NA	NA	NA	NA
VEJ45792.1\|1550222_1550495_-	Uncharacterised protein	A0A2P1A0R7	Gordonia_phage	9.2e-07	65.0
VEJ45793.1\|1550544_1551093_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45794.1\|1551073_1551763_+\|plate	Phage P2 baseplate assembly protein gpV	K4HZZ9	Acidithiobacillus_phage	5.2e-22	34.0
VEJ45795.1\|1551759_1552101_+	Gene 25-like lysozyme	Q75QM0	Wolbachia_phage	2.5e-30	58.7
VEJ45796.1\|1552097_1552925_+	Uncharacterized homolog of phage Mu protein gp47	A0A219VH98	Ochrobactrum_phage	4.7e-38	32.7
VEJ45797.1\|1552924_1554031_+\|tail	Bacteriophage P2-related tail formation protein	K4I1F8	Acidithiobacillus_phage	1.3e-14	33.9
VEJ45798.1\|1554032_1557176_+	Uncharacterised protein	K4ICQ5	Acidithiobacillus_phage	3.1e-154	34.4
VEJ45799.1\|1557189_1558644_+\|tail	Phage tail repeat like	NA	NA	NA	NA
VEJ45800.1\|1559049_1559874_+	Site-specific DNA methylase	A0A219VHB5	Ochrobactrum_phage	4.3e-84	57.1
VEJ45801.1\|1560029_1561421_+\|tail	Phage tail sheath protein	A0A088FVH5	Escherichia_phage	2.5e-132	54.4
VEJ45802.1\|1561420_1561927_+\|tail	phage major tail tube protein	K4I1G5	Acidithiobacillus_phage	2.4e-29	40.4
VEJ45803.1\|1561929_1562217_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45804.1\|1562323_1564708_+\|tail	Phage-related minor tail protein	A0A2I5ARC1	Synechococcus_phage	1.3e-11	26.2
VEJ45805.1\|1564713_1565094_+	Phage protein U	D5LGY3	Escherichia_phage	1.7e-22	43.1
VEJ45806.1\|1565090_1565315_+	Phage Tail Protein X	A0A2H4J946	uncultured_Caudovirales_phage	3.7e-06	51.0
VEJ45807.1\|1565311_1566622_+	Phage protein D	K4HZC6	Acidithiobacillus_phage	2.4e-68	38.6
VEJ45808.1\|1566679_1567003_-	PemK-like protein	NA	NA	NA	NA
VEJ45809.1\|1567002_1567227_-	Protein of uncharacterised function (DUF3018)	NA	NA	NA	NA
VEJ45810.1\|1567369_1568032_+	Phage-related lysozyme (muraminidase)	A0A141GEY9	Brucella_phage	2.2e-46	60.4
VEJ45811.1\|1568028_1568256_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45812.1\|1568387_1568600_+	Uncharacterised protein	NA	NA	NA	NA
VEJ45813.1\|1568768_1569080_-	Uncharacterised protein	NA	NA	NA	NA
VEJ45814.1\|1569043_1569772_-	Uncharacterized phage-encoded protein	B5AX29	Iodobacteriophage	9.6e-27	39.4
VEJ45815.1\|1570043_1571201_-\|integrase	Prophage CP4-57 integrase	A0A1X9HVL9	Ruegeria_phage	5.5e-77	39.4
1571219:1571237	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1815464 : 1821625

Edwardsiella_phage(50.0%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ46010.1\|1815464_1815821_+	Uncharacterised protein	A0A088FAU1	Sulfitobacter_phage	7.0e-07	40.2
VEJ46011.1\|1815801_1817127_+\|terminase	phage terminase, large subunit, PBSX family	A0A088F6U9	Sulfitobacter_phage	3.8e-146	57.8
VEJ46012.1\|1817111_1817336_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46013.1\|1818007_1818796_-	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	K4Q356	Edwardsiella_phage	8.3e-08	47.6
VEJ46014.1\|1818874_1819387_-	Uncharacterised protein	A0A076G7L7	Bacillus_phage	3.4e-10	54.4
VEJ46015.1\|1819461_1820037_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46016.1\|1819996_1820149_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46017.1\|1820238_1820748_-	Uncharacterised protein	K4Q356	Edwardsiella_phage	3.0e-11	55.2
VEJ46018.1\|1820833_1821625_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	K4PXF0	Edwardsiella_phage	1.4e-10	60.4

DBSCAN-SWA_9

1869824 : 1883463

Edwardsiella_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ46058.1\|1869824_1874789_+	Hef nuclease	A0A2H4UTW8	Bodo_saltans_virus	2.2e-42	27.0
VEJ46059.1\|1875174_1875345_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46060.1\|1876297_1877026_+	UDP-N-acetylglucosamine acyltransferase	A0A076G7L7	Bacillus_phage	3.0e-12	54.8
VEJ46061.1\|1877107_1877779_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	K4PXF0	Edwardsiella_phage	9.8e-10	54.5
VEJ46062.1\|1877862_1878579_+	Uncharacterised protein	K4PXF0	Edwardsiella_phage	4.7e-10	56.4
VEJ46063.1\|1878662_1879160_+	Uncharacterised protein	A0A076G7L7	Bacillus_phage	1.2e-09	53.4
VEJ46064.1\|1879236_1880025_+	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	K4PWT3	Edwardsiella_phage	1.3e-08	55.0
VEJ46065.1\|1880049_1880145_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46066.1\|1880804_1882376_+	Uncharacterized protein conserved in bacteria	H7BV78	unidentified_phage	4.8e-15	27.9
VEJ46067.1\|1882389_1882737_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46068.1\|1882800_1883463_+	Phage-related lysozyme (muraminidase)	A0A141GEY9	Brucella_phage	2.4e-45	63.6

DBSCAN-SWA_10

1957654 : 1982752

Mannheimia_phage(19.05%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ46131.1\|1957654_1958368_-	LexA repressor	A0A1B2APZ3	Phage_Wrath	7.8e-05	32.8
VEJ46132.1\|1959563_1959752_+	Uncharacterised protein	A0A219VHB0	Ochrobactrum_phage	1.7e-07	52.8
VEJ46133.1\|1959807_1960809_+	Phage protein D	A0A219VHA9	Ochrobactrum_phage	5.1e-87	50.9
VEJ46134.1\|1960949_1961771_+	Site-specific DNA methylase	A0A219VHB5	Ochrobactrum_phage	7.6e-89	62.6
VEJ46135.1\|1962206_1962488_+	Plasmid maintenance system killer protein	A0A0M3LQB1	Mannheimia_phage	8.5e-16	46.2
VEJ46136.1\|1962505_1962805_+	Antitoxin HigA-1	A0A0M3LPV0	Mannheimia_phage	1.8e-16	45.5
VEJ46137.1\|1962810_1963851_-	site-specific tyrosine recombinase XerC	A0A291AUF0	Sinorhizobium_phage	5.2e-34	31.3
VEJ46138.1\|1963853_1964102_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46139.1\|1964214_1964838_-	putative phage-type endonuclease	A0A0U2BXF3	Paracoccus_phage	1.8e-45	44.1
VEJ46140.1\|1964839_1965595_-	ERF superfamily	K4IBY8	Acinetobacter_phage	1.7e-10	36.8
VEJ46141.1\|1965732_1966470_-	Phage anti-repressor protein	Q7Y5W2	Haemophilus_phage	7.4e-43	43.4
VEJ46142.1\|1966533_1966908_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46143.1\|1967065_1967683_-	LexA repressor	A0A1X9HW95	Ruegeria_phage	5.3e-18	41.8
VEJ46144.1\|1967792_1968044_+	antitoxin HipB	NA	NA	NA	NA
VEJ46145.1\|1968203_1968551_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46146.1\|1968641_1969238_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46147.1\|1969307_1969451_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46148.1\|1969443_1970523_+	Uncharacterized protein conserved in bacteria	A0A076GD06	Sinorhizobium_phage	4.2e-18	37.9
VEJ46149.1\|1970584_1970956_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46150.1\|1971138_1971486_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46151.1\|1971472_1971991_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46152.1\|1972038_1972524_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46153.1\|1972564_1972858_-	Uncharacterized HTH-type transcriptional regulator ybaQ	A0A0M3LPV0	Mannheimia_phage	7.8e-12	40.0
VEJ46154.1\|1972874_1973156_-	Plasmid maintenance system killer protein	A0A0M3LQB1	Mannheimia_phage	2.0e-20	50.5
VEJ46155.1\|1973344_1973785_+	Helix-destabilizing protein	A0A0K1LLZ9	Caulobacter_phage	5.4e-33	60.5
VEJ46156.1\|1973837_1974332_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46157.1\|1974428_1974686_+	Antitoxin PemI	NA	NA	NA	NA
VEJ46158.1\|1974682_1975009_+	mRNA interferase PemK	NA	NA	NA	NA
VEJ46159.1\|1975430_1975577_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46160.1\|1975624_1976332_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46161.1\|1976589_1976946_+	Uncharacterised protein	A0A088FAU1	Sulfitobacter_phage	7.0e-07	40.2
VEJ46162.1\|1976926_1978252_+\|terminase	phage terminase, large subunit, PBSX family	A0A088F6U9	Sulfitobacter_phage	3.8e-146	57.8
VEJ46163.1\|1978236_1978461_+	Uncharacterised protein	NA	NA	NA	NA
VEJ46164.1\|1979132_1979921_-	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	K4Q356	Edwardsiella_phage	8.3e-08	47.6
VEJ46165.1\|1979999_1980512_-	Uncharacterised protein	A0A076G7L7	Bacillus_phage	3.4e-10	54.4
VEJ46166.1\|1980587_1981010_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46167.1\|1981066_1981276_-	Uncharacterised protein	NA	NA	NA	NA
VEJ46168.1\|1981365_1981875_-	Uncharacterised protein	K4Q356	Edwardsiella_phage	3.0e-11	55.2
VEJ46169.1\|1981960_1982752_-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	K4PXF0	Edwardsiella_phage	1.4e-10	60.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134529

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection